Synechococcus sp. JA-3-3Ab, complete genome NC_007775 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 86606562 Common - putative adenosine deaminase CYA_1916 39 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 86604882 Common - peptide/opine/nickel uptake ABC transporter (PepT) family, ATP-binding protein CYA_0153 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 86606918 Common hisF imidazole glycerol phosphate synthase subunit HisF CYA_2282 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 86607494 Common - conserved hypothetical protein TIGR00159 CYA_2894 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 86606868 Common - quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein CYA_2230 90 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 86607269 Common - deoxyhypusine synthase family protein CYA_2657 35 COG1899 DYS1, Deoxyhypusine synthase Posttranslational modification, protein turnover, chaperones 86606969 Nonpathogen - hypothetical protein CYA_2342 3 None None None 86606527 Common devA probable glycolipid ABC exporter (DevE) family, ATP-binding protein CYA_1880 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 86605517 Common - carboxylesterase, beta-lactamase family CYA_0811 57 COG2367 PenP, Beta-lactamase class A Defense mechanisms 86605737 Nonpathogen - hypothetical protein CYA_1042 1 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 86604844 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type CYA_0114 162 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 86605658 Common - D12 class N6 adenine-specific DNA methyltransferase CYA_0956 103 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 86606323 Common purE phosphoribosylaminoimidazole carboxylase, catalytic subunit CYA_1667 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 86607062 Common - ISSoc2, transposase CYA_2440 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606275 Common ccmM carbon dioxide concentrating mechanism protein CcmM CYA_1614 153 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 86605057 Common - pantothenate kinase CYA_0337 8 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 86607285 Common - DnaJ domain protein CYA_2673 12 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86604897 Common moaE molybdopterin converting factor, subunit 2 CYA_0169 152 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 86607298 Common ackA acetate kinase CYA_2688 162 COG0282 ackA, Acetate kinase Energy production and conversion 86606053 Common - transcriptional regulator, Fur family CYA_1383 181 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 86606674 Common - putative transposase CYA_2034 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606313 Common - sensory box histidine kinase/response regulator CYA_1657 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86604819 Common - hypothetical protein CYA_0089 9 None None None 86604772 Common - putative transporter, bacteriochlorophyll delivery (BCD) family CYA_0041 27 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 86605294 Nonpathogen - hypothetical protein CYA_0578 2 None None None 86606202 Common - hypothetical protein CYA_1536 5 None None None 86607363 Common - NAD-dependent epimerase/dehydratase family CYA_2760 137 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 86606478 Common - ferredoxin, 4Fe-4S CYA_1827 27 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 86605407 Common - hypothetical protein CYA_0695 10 None None None 86605422 Common argG argininosuccinate synthase CYA_0710 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 86605772 Common - putative cell envelope-related function transcriptional attenuator CYA_1077 61 COG1316 LytR, Transcriptional regulator Transcription 86605316 Nonpathogen - hypothetical protein CYA_0600 2 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 86606473 Common nifK nitrogenase molybdenum-iron protein beta chain CYA_1821 54 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 86605364 Common comB 2-phosphosulfolactate phosphatase CYA_0651 39 COG2045 COG2045, Phosphosulfolactate phosphohydrolase and related enzymes Coenzyme metabolism / General function prediction only 86606743 Common - hypothetical protein CYA_2103 29 COG4121 COG4121, Uncharacterized conserved protein Function unknown 86606146 Common pyrG CTP synthetase CYA_1479 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 86605706 Common - methyltransferase, FkbM family CYA_1007 74 COG3914 Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family Posttranslational modification, protein turnover, chaperones 86605101 Common - hypothetical protein CYA_0383 9 None None None 86607257 Common ribE riboflavin synthase subunit alpha CYA_2645 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 86606507 Common crtH carotenoid isomerase CYA_1857 83 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 86605257 Nonpathogen - hypothetical protein CYA_0540 2 None None None 86607271 Common - sensory box histidine kinase CYA_2659 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 86606752 Common atpG F0F1 ATP synthase subunit gamma CYA_2112 207 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 86606900 Common - protein kinase CYA_2262 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86607260 Common glgA glycogen synthase CYA_2648 144 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 86605352 Common - CO2 hydration protein CYA_0638 9 None None None 86605910 Common - putative ribosomal protein S1 CYA_1227 214 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 86606793 Nonpathogen - hypothetical protein CYA_2154 1 None None None 86606736 Common tyrS tyrosyl-tRNA synthetase CYA_2096 237 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606927 Common - putative cyclase/dehydrase CYA_2293 26 COG5637 COG5637, Predicted integral membrane protein Function unknown 86606660 Common apt adenine phosphoribosyltransferase CYA_2018 165 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 86605262 Common typA GTP-binding protein TypA CYA_0545 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 86606610 Common - type IV pilus assembly protein PilB CYA_1965 168 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 86605974 Common - putative type III restriction-modification system, Res subunit CYA_1293 29 None None None 86606619 Common xseB exodeoxyribonuclease VII, small subunit CYA_1975 25 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 86606397 Nonpathogen - hypothetical protein CYA_1742 2 None None None 86606816 Common - Thf1-like protein CYA_2176 10 None None None 86605975 Common - anaerobic ribonucleotide reductase activating protein CYA_1294 61 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 86605442 Common cse3 CRISPR-associated protein, Cse3 family CYA_0730 32 None None None 86606209 Common glmS glucosamine--fructose-6-phosphate aminotransferase, isomerizing CYA_1543 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 86607339 Common - electron transfer flavoprotein, alpha subunit/FixB family protein CYA_2735 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 86606488 Common - hypothetical protein CYA_1837 25 None None None 86605323 Nonpathogen - putative urease accessory protein UreD CYA_0607 12 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 86606211 Common - membrane protein, TerC family CYA_1547 67 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 86605884 Nonpathogen - hypothetical protein CYA_1200 1 None None None 86606891 Common - cyclopropane-fatty-acyl-phospholipid synthase family protein CYA_2254 168 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 86605075 Common - hypothetical protein CYA_0356 10 None None None 86606080 Common - S-layer domain protein CYA_1411 11 None None None 86606100 Common - hypothetical protein CYA_1432 11 None None None 86607248 Nonpathogen - hypothetical protein CYA_2634 1 None None None 86605946 Common minC septum formation inhibitor CYA_1264 74 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 86604931 Common uvrC excinuclease ABC subunit C CYA_0207 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 86607441 Nonpathogen - hypothetical protein CYA_2839 1 None None None 86606725 Common - hypothetical protein CYA_2085 7 None None None 86605678 Common - response regulator CYA_0978 225 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 86605366 Common argC N-acetyl-gamma-glutamyl-phosphate reductase CYA_0652 214 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 86605863 Common rplB 50S ribosomal protein L2 CYA_1175 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 86605380 Common - nucleotidyl transferase family protein CYA_0667 223 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 86606338 Common - enoyl-(acyl carrier protein) reductase CYA_1682 236 COG0623 FabI, Enoyl- acyl-carrier-protein 86607471 Common - copper-translocating P-type ATPase CYA_2871 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 86606423 Nonpathogen - hypothetical protein CYA_1769 1 None None None 86606349 Common mgtE-2 magnesium transporter CYA_1693 173 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 86606199 Nonpathogen - hypothetical protein CYA_1534 1 None None None 86605749 Nonpathogen - hypothetical protein CYA_1054 1 None None None 86606377 Common - rhodanese domain protein CYA_1722 148 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 86606508 Common potB spermidine/putrescine ABC transporter, permease protein CYA_1858 197 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 86607113 Common prmA ribosomal protein L11 methyltransferase CYA_2493 185 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 86607121 Common - mannose-6-phosphate isomerase family protein CYA_2501 124 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 86607177 Nonpathogen psbX-1 photosystem II reaction center protein PsbX CYA_2558 2 None None None 86605663 Common - putative cell division protein FtsW CYA_0961 198 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 86605715 Common - hypothetical protein CYA_1019 7 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 86604862 Common - putative glycolate oxidase, iron-sulfur subunit CYA_0131 179 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 86606590 Common - RelA/SpoT family protein CYA_1944 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 86604937 Common - ABC1 domain protein CYA_0213 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 86606252 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type CYA_1589 155 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 86607115 Common hisS histidyl-tRNA synthetase CYA_2495 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86607356 Common - SpoIID/LytB domain protein CYA_2753 48 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 86604917 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYA_0193 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 86605562 Common - hypothetical protein CYA_0858 10 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 86605586 Nonpathogen crm2-1 CRISPR-associated protein, Crm2 family CYA_0882 6 COG1353 COG1353, Predicted hydrolase of the HD superfamily (permuted catalytic motifs) General function prediction only 86606282 Common thrB homoserine kinase CYA_1622 121 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 86605992 Common - ISSoc4, transposase orfAB CYA_1311 51 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607483 Common purM phosphoribosylformylglycinamidine cyclo-ligase CYA_2883 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 86606297 Common tsf elongation factor Ts CYA_1639 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 86604823 Common - response regulator CYA_0093 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 86606060 Nonpathogen - hypothetical protein CYA_1390 1 None None None 86605016 Common psaF photosystem I reaction center subunit III CYA_0295 10 None None None 86605917 Nonpathogen - hypothetical protein CYA_1234 1 None None None 86605637 Common - nucleotide-binding protein CYA_0935 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 86606588 Common icc putative 3'',5''-cyclic-nucleotide phosphodiesterase CYA_1942 82 COG1409 Icc, Predicted phosphohydrolases General function prediction only 86605111 Common - oxidoreductase, aldo/keto reductase family CYA_0392 38 COG1453 COG1453, Predicted oxidoreductases of the aldo/keto reductase family General function prediction only 86605396 Common - nucleotidyl transferase family protein CYA_0684 234 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 86606114 Common rpmE 50S ribosomal protein L31 CYA_1446 161 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 86606532 Common hisC histidinol-phosphate aminotransferase CYA_1885 226 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 86605852 Common rplF 50S ribosomal protein L6 CYA_1164 242 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 86605496 Common rsgA ribosome small subunit-dependent GTPase A CYA_0790 164 COG1162 COG1162, Predicted GTPases General function prediction only 86606109 Common - carbohydrate uptake ABC transporter-1 (CUT1) family, ATP-binding protein CYA_1441 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 86605616 Common - NifU domain protein CYA_0914 112 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 86605625 Common - transporter, monovalent cation:proton antiporter-2 (CPA2) family CYA_0923 208 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 86606807 Nonpathogen - hypothetical protein CYA_2167 1 None None None 86606483 Common - hypothetical protein CYA_1832 9 None None None 86604734 Common dnaA chromosomal replication initiation protein CYA_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 86605067 Nonpathogen - hypothetical protein CYA_0347 1 None None None 86607276 Nonpathogen petG cytochrome b6f complex subunit PetG CYA_2664 1 None None None 86607291 Common cutA divalent-cation tolerance protein CutA CYA_2680 118 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 86606690 Common - cellulose synthase, catalytic subunit-like protein CYA_2050 40 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86605278 Common - glyoxalase family protein CYA_0562 9 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 86604890 Common coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase CYA_0161 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 86607059 Common malQ 4-alpha-glucanotransferase CYA_2436 120 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 86605868 Common - ISSoc7, transposase CYA_1181 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605849 Common rplO 50S ribosomal protein L15 CYA_1161 186 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 86605126 Common - pentapeptide repeat family protein CYA_0407 80 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86605905 Common - SpoIID/LytB domain protein CYA_1221 44 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 86605524 Nonpathogen - hypothetical protein CYA_0819 1 None None None 86606458 Nonpathogen - TPR repeat protein CYA_1805 4 None None None 86606184 Common rpsD 30S ribosomal protein S4 CYA_1519 244 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 86605454 Common - NADH dehydrogenase subunit I CYA_0744 188 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 86605578 Nonpathogen - putative CRISPR-associated RAMP protein CYA_0874 6 COG1337 COG1337, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86606305 Nonpathogen - hypothetical protein CYA_1649 1 None None None 86605804 Nonpathogen - hypothetical protein CYA_1115 1 None None None 86606190 Common rimM 16S rRNA-processing protein CYA_1525 177 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 86607424 Common - DSBA thioredoxin domain protein CYA_2822 104 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 86605401 Common - beta alanine--pyruvate transaminase CYA_0689 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 86606543 Common cysS cysteinyl-tRNA synthetase CYA_1896 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606243 Nonpathogen - hypothetical protein CYA_1580 1 None None None 86606979 Common - sensor histidine kinase CYA_2352 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86607476 Common - putative single-strand binding protein CYA_2876 44 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 86605605 Common cobI precorrin-2 methyltransferase CYA_0903 105 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 86605464 Nonpathogen - hypothetical protein CYA_0757 4 None None None 86606157 Common - RNA polymerase sigma factor RpoE CYA_1490 174 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 86607216 Nonpathogen psbX-2 photosystem II reaction center protein PsbX CYA_2600 2 None None None 86605436 Common - CobN/magnesium chelatase domain protein CYA_0724 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 86606309 Common - RDD family protein CYA_1653 7 COG1714 COG1714, Predicted membrane protein/domain Function unknown 86604752 Common gap-1 glyceraldehyde-3-phosphate dehydrogenase, type I CYA_0020 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 86606913 Common - hypothetical protein CYA_2277 111 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 86604985 Common - tldD/pmbA family protein CYA_0264 150 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 86606069 Common - hypothetical protein CYA_1399 26 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 86605541 Common - hypothetical protein CYA_0837 8 None None None 86605830 Nonpathogen - hypothetical protein CYA_1142 3 None None None 86606074 Common petA cytochrome b6f complex subunit PetA CYA_1404 10 None None None 86605347 Common - hypothetical protein CYA_0633 15 None None None 86606921 Common - pspA/IM30 family protein CYA_2285 95 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 86605344 Common trpD anthranilate phosphoribosyltransferase CYA_0630 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 86607038 Nonpathogen - hypothetical protein CYA_2414 1 None None None 86604750 Common - hypothetical protein CYA_0018 9 None None None 86607315 Nonpathogen - hypothetical protein CYA_2707 1 None None None 86606939 Common - antioxidant, AhpC/TSA family CYA_2305 229 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86606730 Nonpathogen - hypothetical protein CYA_2090 1 None None None 86605032 Common - ABC transporter, permease/ATP-binding protein CYA_0311 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 86605609 Common - hypothetical protein CYA_0906 7 None None None 86604989 Common - peptide/opine/nickel ABC transporter (PepT) family, substrate-binding protein CYA_0268 206 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 86605227 Common - CobN/magnesium chelatase domain protein CYA_0510 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 86606213 Common - universal stress protein family CYA_1549 6 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 86606627 Nonpathogen - hypothetical protein CYA_1984 6 None None None 86604975 Common - cytochrome c biogenesis membrane protein CYA_0252 18 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 86606062 Common - TPR repeat protein CYA_1393 105 COG0457 NrfG, FOG: TPR repeat General function prediction only 86605151 Nonpathogen - hypothetical protein CYA_0432 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86605783 Common - RNA methyltransferase, TrmH family CYA_1093 210 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 86606417 Common mfd transcription-repair coupling factor CYA_1763 229 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 86604942 Nonpathogen cpcD phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod CYA_0218 7 None None None 86604805 Common secF preprotein translocase subunit SecF CYA_0075 207 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 86607090 Common - hypothetical protein CYA_2468 7 None None None 86605903 Common - glutathione S-transferase CYA_1219 109 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 86606586 Common - thermonuclease CYA_1940 25 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 86605162 Nonpathogen - hypothetical protein CYA_0443 1 None None None 86607025 Nonpathogen - hypothetical protein CYA_2400 1 None None None 86605146 Common rca ribulose bisphosphate carboxylase/oxygenase activase CYA_0427 9 COG4451 RbcS, Ribulose bisphosphate carboxylase small subunit Energy production and conversion 86607239 Nonpathogen - hypothetical protein CYA_2625 1 None None None 86605104 Nonpathogen - hypothetical protein CYA_0385 1 None None None 86606936 Common scpA segregation and condensation protein A CYA_2302 25 COG1354 COG1354, Uncharacterized conserved protein Function unknown 86605086 Common - glyoxalase family protein CYA_0367 5 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 86606410 Common - putative monovalent cation/H+ antiporter subunit D CYA_1755 207 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 86605734 Common - conserved hypothetical protein DUF403 CYA_1039 82 COG2307 COG2307, Uncharacterized protein conserved in bacteria Function unknown 86607243 Common - glycosyl hydrolase domain protein CYA_2629 100 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 86606982 Common panE-2 2-dehydropantoate 2-reductase CYA_2356 123 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 86606916 Common - hypothetical protein CYA_2280 8 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 86606046 Common - ISSoc2, transposase CYA_1375 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86604949 Nonpathogen - hypothetical protein CYA_0225 1 None None None 86604748 Nonpathogen - hypothetical protein CYA_0015 2 None None None 86604953 Nonpathogen - hypothetical protein CYA_0229 1 None None None 86604961 Common thyX thymidylate synthase, flavin-dependent CYA_0237 20 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 86607128 Common - CAAX amino terminal protease family protein CYA_2509 10 None None None 86605194 Common - pentapeptide repeat family protein CYA_0476 83 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86605746 Common - glycosyl transferase, group 1 CYA_1051 217 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 86604983 Common - glutamate-cysteine ligase, family 2 CYA_0262 20 COG2170 COG2170, Uncharacterized conserved protein Function unknown 86606970 Common - ISSoc1, transposase, truncation CYA_2343 36 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605607 Common - acetyltransferase, GNAT family CYA_0905 10 COG0456 RimI, Acetyltransferases General function prediction only 86605138 Nonpathogen gvpV gas vesicle protein V CYA_0419 2 None None None 86605008 Common thiD phosphomethylpyrimidine kinase CYA_0287 212 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 86607030 Common - hypothetical protein CYA_2406 10 None None None 86605210 Common psaC photosystem I subunit VII CYA_0492 54 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 86606905 Common - peptidase, M23B family CYA_2269 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 86605694 Common - hypothetical protein CYA_0995 8 None None None 90296801 Nonpathogen rpmH 50S ribosomal protein L34 CYA_2905 1 None None None 86605682 Common - carboxylesterase, beta-lactamase family CYA_0983 102 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 86606023 Common - hypothetical protein CYA_1350 7 None None None 86606798 Common - hypothetical protein CYA_2157 8 None None None 86607005 Common rpsA 30S ribosomal protein S1 CYA_2379 212 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 86606645 Common - ISSoc2, resolvase CYA_2002 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605176 Common - aromatic acid decarboxylase CYA_0458 152 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 86606428 Nonpathogen - hypothetical protein CYA_1774 2 None None None 86604797 Common - hypothetical protein CYA_0065 7 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 86606160 Common - DnaJ domain protein CYA_1493 10 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86606240 Common - putative diflavin flavoprotein CYA_1576 124 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 86605512 Nonpathogen - hypothetical protein CYA_0806 1 None None None 86606232 Nonpathogen - hypothetical protein CYA_1568 1 None None None 86604915 Common - trypsin domain lipoprotein CYA_0189 35 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 86607048 Common - ISSoc2, resolvase CYA_2425 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606657 Common glyA serine hydroxymethyltransferase CYA_2015 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 86606221 Nonpathogen - TPR-repeat protein CYA_1557 8 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 86606421 Common - hypothetical protein CYA_1767 19 None None None 86606873 Common - VanW family protein CYA_2235 38 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 86605417 Common - ISSoc1, transposase CYA_0704 61 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607013 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CYA_2387 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 86607459 Common - serine/threonine protein kinase CYA_2859 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86604836 Common - UDP-N-acetylglucosamine 2-epimerase CYA_0107 150 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 86605649 Common nadB L-aspartate oxidase CYA_0948 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 86606280 Common - efflux transporter, RND family, MFP subunit CYA_1620 149 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 86605908 Common - rrf2 family protein CYA_1226 150 COG1959 COG1959, Predicted transcriptional regulator Transcription 86606981 Common - ISSoc3, orfA transposase CYA_2355 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606167 Common fba fructose-1,6-bisphosphate aldolase CYA_1500 174 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 86604889 Common - hypothetical protein CYA_0160 5 None None None 86605001 Common - thrombospondin N-terminal-like domain protein CYA_0280 34 None None None 86606945 Nonpathogen - hypothetical protein CYA_2317 1 None None None 86605876 Common cobB cobyrinic acid a,c-diamide synthase CYA_1189 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 86605131 Common - putative uracil-DNA glycosylase, family 4 CYA_0412 64 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 86606007 Common - transcriptional regulator, Crp/Fnr family CYA_1331 125 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 86606707 Common - hypothetical protein CYA_2067 55 COG3781 COG3781, Predicted membrane protein Function unknown 86605474 Common - ISSoc1, transposase CYA_0767 73 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86604875 Common - glycosyl transferase, WecB/TagA/CpsF family CYA_0146 112 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 86605230 Common - transcriptional regulator, MerR family CYA_0513 111 COG0789 SoxR, Predicted transcriptional regulators Transcription 86605839 Common glmU UDP-N-acetylglucosamine pyrophosphorylase CYA_1151 227 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 86607097 Common - DoxX family protein CYA_2476 46 COG2259 COG2259, Predicted membrane protein Function unknown 86606103 Nonpathogen - putative lipoprotein CYA_1435 1 COG3889 COG3889, Predicted solute binding protein General function prediction only 86606449 Common petB cytochrome b6 CYA_1796 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 86606839 Nonpathogen - hypothetical protein CYA_2200 2 None None None 86605207 Common - hydrolase, alpha/beta fold family CYA_0489 155 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86607466 Nonpathogen - hypothetical protein CYA_2866 13 None None None 86606347 Common fmt methionyl-tRNA formyltransferase CYA_1691 217 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 86606544 Common - peptidase, S10 (carboxypeptidase Y) family CYA_1897 37 COG2939 COG2939, Carboxypeptidase C (cathepsin A) Amino acid transport and metabolism 86606460 Nonpathogen - hypothetical protein CYA_1807 4 None None None 86605995 Common - hypothetical protein CYA_1317 7 None None None 86607360 Nonpathogen - hypothetical protein CYA_2757 1 None None None 86606785 Common bcp bacterioferritin comigratory protein CYA_2145 229 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86607385 Common - ferric iron uptake ABC transporter (FeT) family, permease protein CYA_2783 68 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 86607070 Nonpathogen - hypothetical protein CYA_2448 2 None None None 86607165 Nonpathogen - hypothetical protein CYA_2546 3 COG1769 COG1769, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86606786 Common - serine/threonine protein kinase CYA_2146 150 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86606609 Common - acetolactate synthase CYA_1964 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 86607198 Common - iron-sulfur cluster-binding protein CYA_2579 66 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 86606989 Common - hypothetical protein CYA_2363 24 COG3972 COG3972, Superfamily I DNA and RNA helicases General function prediction only 86606179 Common ctaD cytochrome c oxidase, subunit I CYA_1513 175 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 86606176 Nonpathogen - hypothetical protein CYA_1510 1 None None None 86607180 Nonpathogen - hypothetical protein CYA_2561 1 None None None 86607171 Nonpathogen - hypothetical protein CYA_2552 1 None None None 86606000 Nonpathogen - hypothetical protein CYA_1323 1 None None None 86605558 Nonpathogen - hypothetical protein CYA_0854 1 None None None 86607208 Common tilS tRNA(Ile)-lysidine synthetase CYA_2591 202 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 86605797 Common - transporter, outer membrane receptor (OMR) family CYA_1108 129 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 86606884 Common - tldD/pmbA family protein CYA_2247 157 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 86606749 Common - ferric iron uptake ABC transporter (FeT) family, substrate binding protein CYA_2109 118 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 86605927 Common gloA lactoylglutathione lyase CYA_1244 132 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 86606089 Nonpathogen - hypothetical protein CYA_1420 1 COG5183 SSM4, Protein involved in mRNA turnover and stability RNA processing and modification 86605268 Common - CobQ/CobB/MinD/ParA nucleotide binding domain protein CYA_0553 231 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 86607267 Common - hydrolase, metallo-beta-lactamase family CYA_2655 29 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 86605898 Common - DNA-binding response regulator, LuxR family CYA_1214 224 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86604741 Common - type II DNA topoisomerase, A subunit CYA_0008 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 86605335 Common - hypothetical protein CYA_0621 12 None None None 86607305 Common - ISSoc2, transposase CYA_2695 11 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86604907 Common zam acetazolamide conferring resistance protein Zam CYA_0181 190 COG0557 VacB, Exoribonuclease R Transcription 86605096 Common crtE geranylgeranyl diphosphate synthase CYA_0377 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 86607433 Common - CHAD domain protein CYA_2831 21 COG5607 COG5607, Uncharacterized conserved protein Function unknown 86607446 Common - ISSoc4, transposase orfA CYA_2845 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606390 Common pstB-2 phosphate ABC transporter, ATP-binding protein CYA_1735 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 86606718 Nonpathogen - hypothetical protein CYA_2078 1 None None None 86605828 Common - hypothetical protein CYA_1140 15 None None None 86606710 Common - hypothetical protein CYA_2070 9 None None None 86606695 Common - DnaJ family protein CYA_2055 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86606576 Nonpathogen - hypothetical protein CYA_1930 1 None None None 86606689 Common - metallo-beta-lactamase family protein CYA_2049 80 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 86605243 Common - iron-sulfur cluster-binding protein CYA_0526 68 COG0633 Fdx, Ferredoxin Energy production and conversion 86607340 Nonpathogen - hypothetical protein CYA_2736 9 COG0762 COG0762, Predicted integral membrane protein Function unknown 86604958 Common - hypothetical protein CYA_0234 80 COG1430 COG1430, Uncharacterized conserved protein Function unknown 86606361 Common - rhodanese domain protein CYA_1705 153 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 86606550 Common - Inosine-uridine preferring nucleoside hydrolase family protein CYA_1903 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 86606777 Nonpathogen - phytanoyl-CoA dioxygenase PhyH family protein CYA_2137 5 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 86607230 Common mutL DNA mismatch repair protein CYA_2616 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 86607317 Common - ISSoc4, transposase orfA CYA_2709 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607054 Common - putative exopolyphosphatase CYA_2432 182 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 86605374 Common - hypothetical protein CYA_0661 10 None None None 86605624 Nonpathogen - hypothetical protein CYA_0922 6 None None None 86607193 Common - hypothetical protein CYA_2574 19 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 86605091 Nonpathogen - hypothetical protein CYA_0372 1 None None None 86606797 Common - ISSoc1, transposase CYA_2158 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606158 Common - cyclic nucleotide-binding protein CYA_1491 58 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 86604921 Nonpathogen - putative pilin CYA_0197 1 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 86606097 Common - putative lipoprotein CYA_1430 2 COG3889 COG3889, Predicted solute binding protein General function prediction only 86607083 Common - oxidoreductase, NAD-binding CYA_2461 74 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 86605304 Common - WD40-like beta propeller repeat protein CYA_0588 54 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 86606315 Common - putative diflavin flavoprotein CYA_1659 113 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 86607403 Common - putative hydantoin utilization protein B CYA_2800 93 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 86605296 Common - iojap protein CYA_0580 192 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 86607077 Common - isochorismate synthase CYA_2455 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 86606021 Nonpathogen - hypothetical protein CYA_1347 1 None None None 86605486 Nonpathogen - hypothetical protein CYA_0779 1 None None None 86606260 Common - PHP domain protein CYA_1598 101 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 86604785 Nonpathogen - hypothetical protein CYA_0052 5 None None None 86606954 Common - putative dehydrogenase, E1 component, beta subunit CYA_2326 197 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 86606830 Common sufB cysteine desulfurase activator complex subunit SufB CYA_2190 184 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 86607191 Common - ISSoc2, resolvase CYA_2572 25 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606856 Common - sensor histidine kinase CYA_2217 5 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 86605254 Common - antioxidant, AhpC/Tsa family CYA_0537 227 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86606510 Common - hypothetical protein CYA_1860 11 None None None 86606352 Common - hypothetical protein CYA_1696 71 COG3211 PhoX, Predicted phosphatase General function prediction only 86607137 Nonpathogen - hypothetical protein CYA_2517 3 None None None 86605532 Nonpathogen - hypothetical protein CYA_0828 1 None None None 86606386 Nonpathogen - hypothetical protein CYA_1731 1 None None None 86606374 Common - transcriptional regulator, ArsR family CYA_1718 138 COG0640 ArsR, Predicted transcriptional regulators Transcription 86605882 Common cbbS ribulose bisphosphate carboxylase, small subunit CYA_1196 29 COG4451 RbcS, Ribulose bisphosphate carboxylase small subunit Energy production and conversion 86605498 Nonpathogen - hypothetical protein CYA_0792 1 None None None 86606245 Common - carbohydrate ABC transporter-2 (CUT2) family, permease protein CYA_1582 103 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 86605333 Nonpathogen - hypothetical protein CYA_0617 1 None None None 86605896 Common - phosphate uptake transporter (PhoT) ABC transporter family, substrate-binding protein CYA_1212 138 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 86605949 Common - transporter, monovalent cation:proton antiporter-2 (CPA2) family CYA_1268 114 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 86606498 Common cbiG/cobJ-2 cbiG protein/precorrin-3B C17-methyltransferase CYA_1847 178 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 86606505 Nonpathogen - hypothetical protein CYA_1856 1 None None None 86605284 Common - PP-loop family protein CYA_0568 65 COG1606 COG1606, ATP-utilizing enzymes of the PP-loop superfamily General function prediction only 86605708 Common - oxidoreductase, 2OG-Fe(II) oxygenase family CYA_1009 11 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 86605049 Common - hypothetical protein CYA_0329 8 None None None 86605977 Common - transporter, stomatin/podocin/band 7/nephrosis.2/SPFH (Stomatin) family CYA_1296 56 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 86606401 Common - peptidase, M50B family CYA_1746 38 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 86607259 Common psbD-2 photosystem II protein D2 CYA_2647 21 None None None 86605560 Common - DnaJ domain protein CYA_0856 2 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86606518 Common - metal cation transporter, zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family CYA_1869 102 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 86606756 Common - F0F1 ATP synthase subunit B' CYA_2116 79 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 86606809 Common nrdJ ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein-contatining CYA_2169 32 COG1372 COG1372, Intein/homing endonuclease DNA replication, recombination, and repair 86606612 Common pilC type IV pilus assembly protein PilC CYA_1967 148 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 86607189 Common - sensory box histidine kinase CYA_2569 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86607383 Common - hypothetical protein CYA_2781 77 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86605584 Nonpathogen csx10 CRISPR-associated RAMP protein, Csx10 family CYA_0880 4 COG1337 COG1337, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86604834 Common - hypothetical protein CYA_0104 14 None None None 86605552 Common - BNR/Asp-box repeat protein CYA_0848 30 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 86606228 Nonpathogen - hypothetical protein CYA_1564 1 None None None 86605128 Common rpoB DNA-directed RNA polymerase subunit beta CYA_0409 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 86605671 Common grpE co-chaperone GrpE CYA_0971 230 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 86607069 Common - hypothetical protein CYA_2447 8 None None None 86606399 Nonpathogen - hypothetical protein CYA_1744 2 None None None 86605264 Common cinA competence/damage-inducible protein CinA CYA_0547 213 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 86606486 Common nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN CYA_1835 48 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 86607310 Common - peptidase, M50 family CYA_2702 37 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 86605571 Common - hypothetical protein CYA_0867 10 None None None 86605073 Nonpathogen - hypothetical protein CYA_0355 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86605462 Common - hypothetical protein CYA_0754 12 None None None 86607351 Nonpathogen - RlpA family protein, truncation CYA_2748 1 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 86604754 Common folB dihydroneopterin aldolase CYA_0021 94 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 86606560 Common - ISSoc3, orfA transposase CYA_1913 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605948 Common minE cell division topological specificity factor MinE CYA_1266 32 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 86604880 Common - peptide/opine/nickel ABC transporter (PepT) family, permease protein CYA_0151 209 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 86606897 Nonpathogen - hypothetical protein CYA_2261 1 None None None 86604855 Common - putative RNA-binding protein CYA_0125 59 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 86606568 Common - urea ABC transporter, permease protein CYA_1922 82 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 86605739 Common - X-Pro dipeptidyl-peptidase (S15 family) CYA_1044 69 COG2936 COG2936, Predicted acyl esterases General function prediction only 86607332 Nonpathogen - hypothetical protein CYA_2728 2 None None None 86605581 Common - CRISPR-associated RAMP protein, SSO1426 family CYA_0877 28 COG1337 COG1337, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86606119 Common rpoA DNA-directed RNA polymerase subunit alpha CYA_1451 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 86607450 Nonpathogen - hypothetical protein CYA_2850 3 None None None 86605522 Nonpathogen - hypothetical protein CYA_0816 1 None None None 86605762 Common - hypothetical protein CYA_1067 10 None None None 86606476 Common nifU Fe-S cluster assembly protein NifU CYA_1825 145 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 86604743 Nonpathogen - glyoxalase family protein CYA_0010 6 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 86606471 Common aksA trans-homoaconitate synthase CYA_1820 223 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 86607499 Common - hypothetical protein CYA_2901 16 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606087 Common psbW photosystem II reaction center protein PsbW CYA_1418 10 None None None 86605025 Common phrB-1 deoxyribodipyrimidine photolyase CYA_0303 131 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 86606605 Common lpxA UDP-N-acetylglucosamine acyltransferase CYA_1960 158 COG1043 LpxA, Acyl- acyl carrier protein 86605250 Common - hypothetical protein CYA_0533 14 COG0748 HugZ, Putative heme iron utilization protein Inorganic ion transport and metabolism 86606996 Nonpathogen - hypothetical protein CYA_2370 7 None None None 86605774 Common ribH riboflavin synthase subunit beta CYA_1078 215 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 86606951 Common yliG MiaB tRNA modifying enzyme-like protein CYA_2323 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 86605767 Common - penicillin-binding protein CYA_1072 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 86605485 Nonpathogen - hypothetical protein CYA_0778 2 None None None 86607228 Common - hypothetical protein CYA_2614 79 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 86606116 Common rplM 50S ribosomal protein L13 CYA_1448 234 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 86607159 Common cas2-4 CRISPR-associated protein Cas2 CYA_2539 41 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 86606977 Nonpathogen - hypothetical protein CYA_2350 5 None None None 86605222 Common - polysaccharide deacetylase family protein CYA_0505 92 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 86605409 Common - MazG family protein CYA_0697 152 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 86606445 Common - hypothetical protein CYA_1792 9 None None None 86607365 Common hemB delta-aminolevulinic acid dehydratase CYA_2762 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 86605647 Common nadC nicotinate-nucleotide pyrophosphorylase CYA_0945 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 86607283 Common trmB tRNA (guanine-N(7)-)-methyltransferase CYA_2671 177 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 86606335 Common - manganese/zinc/iron chelate ABC transporter (MZT) family, ATP-binding protein CYA_1679 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 86605728 Common - DNA-binding response regulator CYA_1033 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86605502 Common - DNA-binding response regulator CYA_0796 224 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86605544 Nonpathogen - hypothetical protein CYA_0841 1 None None None 86606434 Common rplA 50S ribosomal protein L1 CYA_1780 240 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 86606380 Common trx-2 thioredoxin CYA_1725 236 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 86605684 Common - hypothetical protein CYA_0985 82 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 86607288 Common - FHA domain protein CYA_2676 11 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 86605894 Common - pyruvate kinase CYA_1210 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 86606145 Nonpathogen - hypothetical protein CYA_1478 4 None None None 86607273 Common - hypothetical protein CYA_2661 8 None None None 86606734 Nonpathogen - hypothetical protein CYA_2094 1 None None None 86607160 Nonpathogen - hypothetical protein CYA_2541 1 None None None 86607278 Common - DnaJ domain protein CYA_2665 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86605709 Nonpathogen - hypothetical protein CYA_1010 1 None None None 86605569 Nonpathogen - hypothetical protein CYA_0865 1 None None None 86605431 Common - thioredoxin CYA_0719 180 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 86607448 Common scpB segregation and condensation protein B CYA_2848 55 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 86604849 Nonpathogen - hypothetical protein CYA_0119 1 None None None 86606456 Common upp uracil phosphoribosyltransferase CYA_1803 164 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 86605661 Common - glutamine amidotransferase, class I CYA_0959 121 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 86606128 Common - prephenate dehydratase CYA_1460 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 86606573 Nonpathogen - hypothetical protein CYA_1927 1 None None None 86607104 Common fabG 3-oxoacyl-(acyl-carrier-protein) reductase CYA_2483 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 86606389 Common pstA-2 phosphate ABC transporter, permease protein PtsA CYA_1734 222 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 86606065 Common deoC deoxyribose-phosphate aldolase CYA_1395 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 86606307 Common rpsR 30S ribosomal protein S18 CYA_1651 212 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 86606881 Common - putative phosphatidylethanolamine-binding protein CYA_2243 136 COG1881 COG1881, Phospholipid-binding protein General function prediction only 86605840 Nonpathogen - hypothetical protein CYA_1152 3 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 86605368 Common - putative tocopherol cyclase CYA_0654 13 None None None 86605596 Common - nitrate/nitrite/cyanate ABC transporter (NitT) family, substrate-binding protein CYA_0894 81 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 86606264 Common petE plastocyanin CYA_1602 11 COG3794 PetE, Plastocyanin Energy production and conversion 86605843 Common - PRC-barrel domain protein CYA_1155 14 COG3881 COG3881, Uncharacterized protein conserved in bacteria Function unknown 86605438 Common - ISSoc2, transposase CYA_0726 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606844 Common - hypothetical protein CYA_2204 9 None None None 86607211 Common - conserved hypothetical protein TIGR00278 CYA_2594 184 COG0759 COG0759, Uncharacterized conserved protein Function unknown 86606911 Common lepB signal peptidase I CYA_2275 206 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 86606294 Common - hypothetical protein CYA_1634 9 None None None 86606583 Common - ISSoc2, resolvase CYA_1937 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86607218 Nonpathogen - hypothetical protein CYA_2603 5 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 90296794 Common - ISSoc8, transposase, interruption-C CYA_0739 43 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607426 Nonpathogen - sporulation and cell division repeat protein CYA_2824 1 None None None 86605198 Common - NAD-dependent glycerol-3-phosphate dehydrogenase family protein CYA_0480 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 86607329 Nonpathogen - hypothetical protein CYA_2725 1 None None None 86607212 Common - putative endoribonuclease L-PSP CYA_2595 194 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 86606182 Common cyoE protoheme IX farnesyltransferase CYA_1517 184 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 86604973 Common - hypothetical protein CYA_0249 14 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 86606004 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein CYA_1327 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 86604968 Common - hypothetical protein CYA_0244 12 None None None 86607292 Common coaD pantetheine-phosphate adenylyltransferase CYA_2681 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 86605812 Common cysH phosophoadenylyl-sulfate reductase CYA_1123 166 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 86605714 Common - hypothetical protein CYA_1016 10 None None None 86605854 Common rplE 50S ribosomal protein L5 CYA_1166 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 86606888 Common - hypothetical protein CYA_2251 8 COG5464 COG5464, Uncharacterized conserved protein Function unknown 86605505 Common - DRTGG domain protein CYA_0799 67 COG0857 Pta, BioD-like N-terminal domain of phosphotransacetylase General function prediction only 86606254 Common cbiG/cobJ-1 cbiG protein/precorrin-3B C17-methyltransferase CYA_1591 117 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 86606278 Common - hypothetical protein CYA_1617 7 COG3937 COG3937, Uncharacterized conserved protein Function unknown 86604933 Common - serine/threonine protein kinase CYA_0209 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86605311 Common - ISSoc2, resolvase CYA_0595 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86607175 Common - universal stress protein family CYA_2556 56 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 86604938 Common - hypothetical protein CYA_0214 9 None None None 86604842 Common chlM Mg-protoporphyrin IX methyl transferase CYA_0112 70 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 86606121 Common rpsM 30S ribosomal protein S13 CYA_1453 243 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 86606033 Common trxB thioredoxin-disulfide reductase CYA_1362 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 86605064 Nonpathogen - hypothetical protein CYA_0344 1 None None None 86607064 Nonpathogen - hypothetical protein CYA_2442 1 None None None 86607322 Common - GAF domain/histidine kinase domain protein CYA_2714 129 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 86605174 Common - hypothetical protein CYA_0456 105 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 86605994 Common - DNA internalization competence protein, ComEC/Rec2 family CYA_1316 97 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 86604956 Common - fibronectin-binding protein CYA_0233 59 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 86606284 Common - hypothetical protein CYA_1624 186 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 86606107 Common - ISSoc2, resolvase CYA_1439 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606534 Nonpathogen - hypothetical protein CYA_1887 1 None None None 86607354 Common hflB cell division protein FtsH CYA_2751 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 86605639 Common - FHA domain protein CYA_0938 9 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 86607372 Common - inositol monophosphatase family protein CYA_2769 174 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 86605358 Common psbB photosystem II P680 chlorophyll A apoprotein CYA_0644 10 None None None 86605925 Common - RNA polymerase sigma factor CYA_1243 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 86605915 Common hisG ATP phosphoribosyltransferase catalytic subunit CYA_1232 209 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 86604770 Common - ISSoc4, transposase orfB CYA_0038 40 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605835 Common - transporter, auxin efflux carrier (AEC) family CYA_1146 36 COG0679 COG0679, Predicted permeases General function prediction only 86605604 Common - anti-anti-sigma factor family protein CYA_0902 21 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 86606663 Common - Mg chelatase-like protein CYA_2021 195 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 86605727 Common ubiA prenyltransferase CYA_1031 162 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 86605113 Common - hypothetical protein CYA_0394 8 None None None 86607117 Common - universal stress protein family CYA_2497 45 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 86607003 Nonpathogen - hypothetical protein CYA_2377 5 None None None 86605298 Common lepA GTP-binding protein LepA CYA_0582 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 86605614 Common nth endonuclease III CYA_0912 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 86607358 Common - peptidase, S1C (protease Do) family CYA_2755 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 86605861 Common rplV 50S ribosomal protein L22 CYA_1173 225 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 86607093 Common - hypothetical protein CYA_2471 227 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 86605985 Common dapB dihydrodipicolinate reductase CYA_1305 215 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 86606126 Common - oxidoreductase, NAD-binding CYA_1458 177 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 86607429 Nonpathogen - Ser/Thr protein phosphatase family protein CYA_2827 12 COG2129 COG2129, Predicted phosphoesterases, related to the Icc protein General function prediction only 86606012 Common - hypothetical protein CYA_1336 13 COG3689 COG3689, Predicted membrane protein Function unknown 86606090 Nonpathogen - hypothetical protein CYA_1421 1 None None None 86605656 Nonpathogen - anti-anti-sigma factor family protein CYA_0954 7 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 86607374 Common - sensor histidine kinase CYA_2773 220 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86606276 Common - hypothetical protein CYA_1615 22 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 86606704 Common - ISSoc3, orfA transposase CYA_2064 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605837 Nonpathogen - hypothetical protein CYA_1149 1 None None None 86606948 Nonpathogen - hypothetical protein CYA_2320 4 None None None 86605170 Common - hypothetical protein CYA_0452 16 None None None 86607438 Common - sensory box histidine kinase/response regulator CYA_2836 226 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86605696 Nonpathogen - hypothetical protein CYA_0997 1 None None None 86607015 Common cobK cobalt-precorrin-6x reductase CYA_2390 81 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 86604876 Common ftsE cell division ATP-binding protein FtsE CYA_0147 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 86606200 Common cysC adenylylsulfate kinase CYA_1535 143 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 86607109 Nonpathogen - hypothetical protein CYA_2488 7 None None None 86605187 Common cysT sulfate ABC transporter, permease protein CysT CYA_0469 239 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 86606659 Nonpathogen - hypothetical protein CYA_2017 1 None None None 86605597 Common - putative tocopherol cyclase CYA_0896 11 None None None 86607457 Nonpathogen - hypothetical protein CYA_2857 1 None None None 86605878 Nonpathogen - hypothetical protein CYA_1192 1 None None None 86606009 Nonpathogen - hypothetical protein CYA_1333 1 None None None 86606943 Common - ABC transporter, ATP-binding protein CYA_2315 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 86605190 Common - acetyltransferase, GNAT family CYA_0472 205 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 86606638 Common - NADH dehydrogenase subunit B CYA_1995 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 86606862 Common - ABC transporter, ATP-binding protein CYA_2224 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 86605275 Common bolA BolA protein CYA_0559 118 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 86606025 Common folC folylpolyglutamate synthase CYA_1353 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 86606956 Common dnaG DNA primase CYA_2329 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 86607099 Common - hydrophobic amino acid ABC transporter (HAAT) family, permease protein CYA_2478 130 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 86606693 Nonpathogen - hypothetical protein CYA_2053 3 COG3881 COG3881, Uncharacterized protein conserved in bacteria Function unknown 86604764 Common - hypothetical protein CYA_0031 8 None None None 86606002 Nonpathogen psbN photosystem II reaction center protein N CYA_1325 1 None None None 86605289 Common - hypothetical protein CYA_0573 9 None None None 86605256 Nonpathogen - hypothetical protein CYA_0539 1 None None None 86606903 Common - DegT/DnrJ/EryC1/StrS aminotransferase family protein CYA_2266 196 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 86605133 Common - hypothetical protein CYA_0414 22 COG5322 COG5322, Predicted dehydrogenase General function prediction only 86605633 Common - L-asparaginase, thermolabile CYA_0931 46 COG4448 AnsA, L-asparaginase II Amino acid transport and metabolism 86605802 Common - 3'-5' exonuclease family protein CYA_1113 99 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 86605611 Common pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase CYA_0908 157 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 86606761 Common - hypothetical protein CYA_2121 10 None None None 86604811 Common menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase CYA_0082 88 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 86605901 Common engA GTP-binding protein EngA CYA_1217 230 COG1160 COG1160, Predicted GTPases General function prediction only 86607443 Nonpathogen - hypothetical protein CYA_2842 2 None None None 86607431 Nonpathogen - hypothetical protein CYA_2829 1 None None None 86605546 Nonpathogen - hypothetical protein CYA_0842 1 None None None 86607052 Common psbE cytochrome b559 subunit alpha CYA_2430 10 None None None 86604987 Common - hypothetical protein CYA_0266 8 None None None 86605349 Nonpathogen - hypothetical protein CYA_0635 1 None None None 86606847 Nonpathogen - hypothetical protein CYA_2207 1 None None None 86605180 Nonpathogen - hypothetical protein CYA_0462 1 COG5283 COG5283, Phage-related tail protein Function unknown 86606215 Common rplI ribosomal protein L9 CYA_1551 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 86605346 Common purN phosphoribosylglycinamide formyltransferase CYA_0632 222 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 86606440 Common - R3H domain protein CYA_1786 21 COG1847 Jag, Predicted RNA-binding protein General function prediction only 86605196 Common - putative 4-hydroxyphenylpyruvate dioxygenase CYA_0478 74 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 86605006 Common ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CYA_0285 180 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 86605555 Nonpathogen - hypothetical protein CYA_0851 1 None None None 86606042 Common ubiD 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYA_1371 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 86606072 Common - hypothetical protein CYA_1402 10 None None None 86604940 Common cpcF phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit CYA_0216 17 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86605781 Common lgt-1 prolipoprotein diacylglyceryl transferase CYA_1091 205 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 86606318 Common - ISSoc4, transposase orfB CYA_1662 55 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605983 Common tuf elongation factor Tu CYA_1302 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 86605038 Common crtB phytoene synthase CYA_0317 115 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 86607032 Common cobS cobalamin synthase CYA_2408 26 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 86604807 Common murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CYA_0077 210 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 86606067 Common - hypothetical protein CYA_1397 7 None None None 86605321 Common ureF urease accessory protein UreF CYA_0605 42 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 86605433 Nonpathogen - hypothetical protein CYA_0720 2 COG3874 COG3874, Uncharacterized conserved protein Function unknown 86607401 Common - NnrU family protein CYA_2799 11 COG4094 COG4094, Predicted membrane protein Function unknown 86604803 Nonpathogen - hypothetical protein CYA_0073 1 None None None 86606207 Common atpC ATP synthase F1, epsilon subunit CYA_1542 66 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 86605460 Nonpathogen - hypothetical protein CYA_0750 1 None None None 86607346 Common - sensor histidine kinase/response regulator CYA_2742 224 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 86605771 Common - 4'-phosphopantetheinyl transferase family protein CYA_1076 62 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 86607237 Common - hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein CYA_2623 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 86604850 Common def peptide deformylase CYA_0120 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 86607041 Nonpathogen - hypothetical protein CYA_2418 1 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 86607092 Common - ThiS domain protein CYA_2470 40 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 86606930 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase CYA_2296 233 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 86605220 Common - hypothetical protein CYA_0503 10 None None None 86605031 Common argB acetylglutamate kinase CYA_0310 222 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 86605819 Common - EAL domain protein CYA_1130 164 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 86606267 Common - hypothetical protein CYA_1606 4 None None None 86605148 Common - FHA domain protein CYA_0429 10 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 86605200 Common gcvH glycine cleavage system protein H CYA_0482 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 86605164 Common - hypothetical protein CYA_0445 7 None None None 86606044 Nonpathogen - hypothetical protein CYA_1373 1 None None None 86606139 Common - ISSoc2, resolvase CYA_1472 24 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605217 Common - hypothetical protein CYA_0499 37 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 86605088 Common mreC rod shape-determining protein CYA_0369 158 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 86607057 Common - acetamidase/formamidase family protein CYA_2435 64 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 86605309 Nonpathogen - hypothetical protein CYA_0593 2 None None None 86606019 Common gatC glutamyl-tRNA(Gln) amidotransferase, C subunit CYA_1343 112 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 86606876 Nonpathogen - hypothetical protein CYA_2238 1 None None None 86606581 Nonpathogen - hypothetical protein CYA_1935 2 None None None 86604963 Common - bacterial sugar transferase family protein CYA_0239 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 86606631 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase CYA_1988 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 86605744 Common - NAD-dependent epimerase/dehydratase family protein CYA_1049 131 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 86606925 Common - hypothetical protein CYA_2291 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 86604998 Common purF amidophosphoribosyltransferase CYA_0277 239 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 86607102 Common - sulfatase CYA_2481 78 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 86605967 Common - polar amino amino acid ABC transporter (PAAT) family, ATP-binding protein CYA_1285 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 86606832 Nonpathogen - hypothetical protein CYA_2191 1 None None None 86606571 Common - peptidase, S9C (acylaminoacyl-peptidase) family CYA_1925 114 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 86604981 Nonpathogen - hypothetical protein CYA_0260 1 None None None 86606578 Nonpathogen psaK photosystem I reaction center protein PsaK CYA_1932 1 None None None 86606553 Common - ATP-dependent protease La domain protein CYA_1906 76 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 86605821 Common - hypothetical protein CYA_1133 10 None None None 86606363 Common - hypothetical protein CYA_1707 7 None None None 86605059 Common trpB tryptophan synthase subunit beta CYA_0339 226 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 86607411 Common glcD glycolate oxidase, subunit GlcD CYA_2808 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 86606238 Common cobH-2 precorrin-8X methylmutase CYA_1574 114 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 86607023 Nonpathogen - hypothetical protein CYA_2398 1 None None None 86606602 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase CYA_1957 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 86605951 Common - conserved hypothetical protein TIGR00023 CYA_1269 168 COG0344 COG0344, Predicted membrane protein Function unknown 86604799 Common - ISSoc3, orfA transposase CYA_0068 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605376 Nonpathogen - hypothetical protein CYA_0664 24 COG4089 COG4089, Predicted membrane protein Function unknown 86606481 Nonpathogen - hypothetical protein CYA_1830 6 None None None 86606624 Common - pentapeptide repeat family protein CYA_1980 99 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86607088 Common - glycosyl transferase, group 2 family protein CYA_2466 190 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86607319 Common - drug exporter-1 (DrugE1) ABC-2 transporter family, permease protein CYA_2711 95 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 86606858 Common - putative arylamine N-acetyltransferase, truncation CYA_2219 43 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 86605789 Common hom homoserine dehydrogenase CYA_1100 216 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 86606537 Common - ISSoc2, transposase CYA_1890 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606747 Common - TrkA domain protein CYA_2106 52 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 86605765 Common - RNA methyltransferase, TrmH family, group 2 CYA_1071 162 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 86607226 Common - putative hydroxylase CYA_2611 45 COG3128 PiuC, Uncharacterized iron-regulated protein Function unknown 86606408 Common - hypothetical protein CYA_1753 8 None None None 86606795 Common - sensor histindine kinase/response regulator CYA_2155 221 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 86605810 Nonpathogen - hypothetical protein CYA_1121 1 None None None 86606960 Common copCD copper resistance protein C/D CYA_2334 47 COG2372 CopC, Uncharacterized protein, homolog of Cu resistance protein CopC General function prediction only 86605302 Common - GTP-binding protein domain CYA_0586 28 COG1160 COG1160, Predicted GTPases General function prediction only 86605906 Common - putative Bdr protein CYA_1223 9 COG5259 RSC8, RSC chromatin remodeling complex subunit RSC8 Chromatin structure and dynamics / Transcription 86607461 Common - transporter, monovalent cation:proton antiporter-2 (CPA2) family CYA_2861 132 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 86605415 Common frr ribosome recycling factor CYA_0703 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 86605534 Common - hypothetical protein CYA_0830 9 None None None 86607135 Common - hypothetical protein CYA_2515 9 None None None 86606528 Common - NAD-dependent epimerase/dehydratase family protein CYA_1879 225 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 86604923 Nonpathogen - prepilin-type N-terminal cleavage/methylation domain protein CYA_0199 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 86604887 Common - transporter, small conductance mechanosensitive ion channel (MscS) family CYA_0157 81 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 86606099 Common - pentapeptide repeat family protein CYA_1431 84 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606333 Common - putative RNA-binding protein CYA_1677 66 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 86606447 Common - hypothetical protein CYA_1794 7 None None None 86606496 Common modA molybdate ABC transporter, molybdate-binding protein CYA_1845 155 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 86605015 Nonpathogen psaJ photosystem I reaction center subunit IX CYA_0294 1 None None None 86606726 Common - hypothetical protein CYA_2086 15 COG5401 COG5401, Spore germination protein General function prediction only 86605997 Common chlH magnesium chelatase CYA_1319 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 86605939 Common leuS leucyl-tRNA synthetase CYA_1256 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606652 Common - MazG family protein CYA_2009 153 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 86606525 Common - transporter, membrane fusion protein (MFP) family CYA_1877 52 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 86604928 Common psaE photosystem I reaction center subunit IV CYA_0204 10 None None None 86605232 Common - hypothetical protein CYA_0515 20 None None None 86606721 Common - ISSoc4, transposase orfB CYA_2081 39 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606783 Nonpathogen - hypothetical protein CYA_2143 1 None None None 86606778 Common chlG bacteriochlorophyll/chlorophyll a synthase CYA_2138 42 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 86607245 Common - putative phosphatidate cytidylyltransferase CYA_2631 21 COG0170 SEC59, Dolichol kinase Lipid metabolism 86605424 Common - hypothetical protein CYA_0712 8 None None None 86606759 Common atpB F0F1 ATP synthase subunit A CYA_2119 190 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 86605061 Nonpathogen - hypothetical protein CYA_0341 2 None None None 86605794 Nonpathogen - hypothetical protein CYA_1105 7 None None None 86607337 Nonpathogen - hypothetical protein CYA_2733 1 None None None 86607362 Common - cation transporter, P-type ATPase family CYA_2759 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 86606174 Common glnB nitrogen regulatory protein P-II CYA_1508 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 86606462 Common - hypothetical protein CYA_1809 29 COG1625 COG1625, Fe-S oxidoreductase, related to NifB/MoaA family Energy production and conversion 86605047 Common - ferredoxin-like protein CYA_0327 54 COG3411 COG3411, Ferredoxin Energy production and conversion 86606987 Common - NAD-dependent epimerase/dehydratase family protein CYA_2361 9 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 86607251 Common - ISSoc4, transposase orfB CYA_2637 53 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605478 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase CYA_0771 195 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 86607398 Common - methyltransferase, HemK family CYA_2796 213 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 86605095 Common hemE uroporphyrinogen decarboxylase CYA_0376 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 86605870 Nonpathogen - hypothetical protein CYA_1183 1 None None None 86606257 Common - NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family CYA_1594 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 86606132 Nonpathogen - hypothetical protein CYA_1465 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86604905 Common - hypothetical protein CYA_0179 10 None None None 86607146 Nonpathogen - hypothetical protein CYA_2526 1 None None None 86607489 Common - TM2 domain protein CYA_2889 4 None None None 86604786 Common - ISSoc4, transposase orfAB CYA_0053 59 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605930 Common - hypothetical protein CYA_1247 10 None None None 86606825 Common miaE tRNA-(MS[2]IO[6]A)-hydroxylase CYA_2185 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 86606699 Common lpdA dihydrolipoamide dehydrogenase CYA_2059 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 86605081 Nonpathogen - putative acylphosphatase CYA_0362 1 COG1254 AcyP, Acylphosphatases Energy production and conversion 86606712 Common - glycosyl hydrolase, family 57 CYA_2072 35 COG1543 COG1543, Uncharacterized conserved protein Function unknown 86607303 Nonpathogen - hypothetical protein CYA_2693 7 None None None 86604879 Common - peptide/opine/nickel ABC transporter (PepT) family, permease protein CYA_0150 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 86605468 Common tatA-1 twin-arginine translocation protein TatA CYA_0761 26 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 86607327 Nonpathogen - hypothetical protein CYA_2719 5 None None None 86606603 Common - ISSoc3, orfA transposase CYA_1958 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605622 Common - hypothetical protein CYA_0920 9 None None None 86606141 Common dcd deoxycytidine triphosphate deaminase CYA_1474 127 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 86605493 Common dnaK-2 chaperone protein DnaK CYA_0787 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 86606194 Common - polysaccharide deacetylase family protein CYA_1529 93 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 86606193 Common - pyridine nucleotide-disulfide oxidoreductase CYA_1528 104 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 86606773 Common glk glucokinase CYA_2134 92 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 86605121 Common - kinase, pfkB family CYA_0402 19 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 86605929 Common - glyoxalase family protein CYA_1246 33 COG3565 COG3565, Predicted dioxygenase of extradiol dioxygenase family General function prediction only 86604771 Nonpathogen - hypothetical protein CYA_0039 2 None None None 86607320 Common - hypothetical protein CYA_2712 7 None None None 86605054 Common - hypothetical protein CYA_0334 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606324 Common - hypothetical protein CYA_1668 4 None None None 86607118 Nonpathogen - hypothetical protein CYA_2498 3 None None None 86605329 Common ntrB-1 nitrate ABC transporter, permease protein NrtB CYA_0614 196 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 86606973 Common tkt transketolase CYA_2346 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 86605115 Common - ISSoc2, transposase CYA_0395 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86604778 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CYA_0046 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 86607479 Common - hypothetical protein CYA_2879 8 None None None 86605892 Common - pentapeptide repeat family protein CYA_1208 100 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606641 Common - hypothetical protein CYA_1998 92 COG1565 COG1565, Uncharacterized conserved protein Function unknown 86606595 Common - AhpC/TSA family protein CYA_1949 131 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86606181 Common - cytochrome oxidase assembly protein CYA_1515 27 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 86606720 Nonpathogen - hypothetical protein CYA_2080 2 None None None 86605792 Common - MAPEG family protein CYA_1102 18 COG3686 COG3686, Predicted membrane protein Function unknown 86606803 Common - hydrolase, NUDIX family CYA_2163 12 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 86605769 Common - HDIG domain protein CYA_1074 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 86605686 Nonpathogen - hypothetical protein CYA_0987 1 None None None 86606286 Common - peptidase, M23B family CYA_1627 188 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 86605060 Nonpathogen - hypothetical protein CYA_0340 1 None None None 86606236 Nonpathogen - hypothetical protein CYA_1572 5 None None None 86606975 Nonpathogen - transcriptional regulator, TetR family CYA_2348 5 COG1309 AcrR, Transcriptional regulator Transcription 86606105 Common - hypothetical protein CYA_1437 86 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86607221 Common - photosystem II protein, PsbB/PsbC family CYA_2606 10 None None None 86605028 Common pmgA pmgA protein CYA_0307 17 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 86606437 Common rplL 50S ribosomal protein L7/L12 CYA_1784 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 86604852 Common - hypothetical protein CYA_0122 14 None None None 86606216 Common pstS-2 phosphate ABC transporter, phosphate-binding protein CYA_1552 149 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 86605500 Common - sensor histidine kinase CYA_0794 95 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86606382 Common - tetratricopeptide repeat protein CYA_1726 87 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 86606454 Nonpathogen - hypothetical protein CYA_1801 4 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 86606538 Common - ISSoc2, resolvase CYA_1891 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606622 Common - hypothetical protein CYA_1978 111 COG0628 PerM, Predicted permease General function prediction only 86605013 Common - RNase3 domain protein CYA_0292 34 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 86607214 Nonpathogen - hypothetical protein CYA_2597 4 None None None 86607272 Common - hypothetical protein CYA_2660 5 None None None 86606729 Nonpathogen - collagen alpha 1(III) chain CYA_2089 2 None None None 86606188 Common hisZ ATP phosphoribosyltransferase regulatory subunit CYA_1524 229 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 86605385 Common - HD domain protein CYA_0673 169 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 86607082 Common - L,L-diaminopimelate aminotransferase CYA_2460 231 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 86607408 Common - HNH endonuclease domain protein CYA_2806 108 COG1403 McrA, Restriction endonuclease Defense mechanisms 86606152 Common ycf4 photosystem I assembly protein Ycf4 CYA_1485 10 None None None 86605359 Nonpathogen psbT photosystem II reaction center protein PsbT CYA_0645 1 None None None 86606546 Common thiL thiamine monophosphate kinase CYA_1899 206 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 86605610 Common - glycerophosphoryl diester phosphodiesterase family protein CYA_0909 66 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 86607016 Common - single-strand DNA-binding protein CYA_2389 193 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 86605634 Nonpathogen - hypothetical protein CYA_0932 1 None None None 86606763 Common gpmI phosphoglyceromutase CYA_2123 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 86605851 Common rplR 50S ribosomal protein L18 CYA_1163 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 86604756 Nonpathogen - hypothetical protein CYA_0023 1 None None None 86605573 Common hemF coproporphyrinogen III oxidase CYA_0869 112 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 86605122 Common - ABC transporter, permease/ATP-binding protein CYA_0403 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 86606301 Nonpathogen - hypothetical protein CYA_1643 1 None None None 86605695 Common - putative type IV pilus secretin PilQ CYA_0996 140 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 86605832 Common - putative aminomethyltransferase CYA_1144 101 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 86606774 Nonpathogen - hypothetical protein CYA_2133 1 None None None 86604991 Common - glycosyl transferase, group 1 family protein CYA_0270 179 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 86606886 Common - ISSoc2, transposase CYA_2249 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607295 Common - ISSoc2, resolvase CYA_2684 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605461 Common ureD urease accessory protein UreD CYA_0753 17 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 86607173 Common - prolyl oligopeptidase CYA_2555 120 COG1505 COG1505, Serine proteases of the peptidase family S9A Amino acid transport and metabolism 86606292 Common - hypothetical protein CYA_1632 91 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 86605966 Common - polar amino amino acid ABC transporter (PAAT) family, amino acid-binding protein CYA_1284 127 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 86604847 Common - endonuclease/exonuclease/phosphatase family protein CYA_0117 47 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 86605681 Nonpathogen - hypothetical protein CYA_0982 1 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 86606291 Common - NADH dehydrogenase subunit J CYA_1631 164 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 86607412 Common - hypothetical protein CYA_2810 99 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 86604912 Nonpathogen - hypothetical protein CYA_0186 1 None None None 86606877 Common - putative chloramphenicol acetyltransferase CYA_2239 85 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 86607022 Common - hypothetical protein CYA_2396 8 None None None 86605036 Common pgk phosphoglycerate kinase CYA_0315 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 86607029 Common - putative adenylate cyclase CYA_2405 105 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 86605818 Common - transporter, major facilitator family CYA_1131 67 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 86606676 Common - hypothetical protein CYA_2036 10 None None None 86605209 Common nadD nicotinate (nicotinamide) nucleotide adenylyltransferase CYA_0491 191 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 86605528 Common - hypothetical protein CYA_0824 10 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 86604971 Common serS seryl-tRNA synthetase CYA_0247 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 86605212 Common - hypothetical protein CYA_0494 7 None None None 86607493 Common uppS undecaprenyl diphosphate synthase CYA_2893 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 86604901 Common moeA molybdopterin biosynthesis protein MoeA CYA_0173 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 86607265 Common - ATP-dependent helicase, DEAD/DEAH box family CYA_2653 106 COG4581 COG4581, Superfamily II RNA helicase DNA replication, recombination, and repair 86606914 Nonpathogen - hypothetical protein CYA_2278 1 None None None 86606439 Common oxaA putative inner membrane protein translocase component YidC CYA_1785 210 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 86605420 Common - conserved hypothetical protein TIGR00250 CYA_0707 182 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 86605518 Common - S4 domain protein CYA_0812 50 COG2501 COG2501, Uncharacterized conserved protein Function unknown 86606122 Common rpmJ ribosomal protein L36 CYA_1454 136 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 86605155 Common - ISSoc6, orfB transposase CYA_0436 26 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607485 Common - response regulator CYA_2885 218 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 86604736 Common - hypothetical protein CYA_0002 35 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86605079 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B CYA_0359 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 86606740 Common - amidase CYA_2100 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 86605539 Common aroH chorismate mutase CYA_0836 38 COG4401 AroH, Chorismate mutase Amino acid transport and metabolism 86606111 Nonpathogen - hypothetical protein CYA_1443 5 None None None 86606516 Common asd aspartate-semialdehyde dehydrogenase CYA_1867 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 86605721 Common - CP12 domain protein CYA_1025 9 None None None 86605982 Common fusA elongation factor G CYA_1301 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 86604870 Common - hypothetical protein CYA_0140 15 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86607197 Nonpathogen - hypothetical protein CYA_2578 1 None None None 86605043 Common - putative helicase CYA_0322 143 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 86604865 Common cas2-1 CRISPR-associated protein Cas2 CYA_0135 12 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 86605644 Nonpathogen - hypothetical protein CYA_0942 6 None None None 86606474 Common nifD nitrogenase molybdenum-iron protein alpha chain CYA_1823 51 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 86606071 Common - hypothetical protein CYA_1401 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 86606994 Nonpathogen - hypothetical protein CYA_2368 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86607071 Nonpathogen - hypothetical protein CYA_2449 1 COG5548 COG5548, Small integral membrane protein Function unknown 86606432 Common nusG transcription antitermination protein NusG CYA_1778 214 COG0250 NusG, Transcription antiterminator Transcription 86605472 Common - peptidase, U32 family CYA_0765 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 86605758 Common ndk nucleoside diphosphate kinase CYA_1063 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 86605483 Common rbfA ribosome-binding factor A CYA_0776 170 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 86606566 Common - urea ABC transporter, ATP-binding protein CYA_1920 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 86604978 Common - FAD-binding protein CYA_0255 168 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 86607250 Common - ISSoc3, orfB transposase CYA_2636 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605186 Common cysW sulfate ABC transporter, permease protein CysW CYA_0468 188 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 86605956 Common psbA-1 photosystem II protein D1 CYA_1274 15 None None None 86605999 Nonpathogen - hypothetical protein CYA_1322 1 None None None 86605779 Nonpathogen - hypothetical protein CYA_1084 1 None None None 86605654 Common sir sulfite reductase, ferredoxin dependent CYA_0952 156 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 86605971 Common - ISSoc4, transposase orfB CYA_1289 55 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606703 Common - ISSoc3, orfB transposase CYA_2063 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605907 Common - ATPase, AAA family CYA_1224 179 COG0714 COG0714, MoxR-like ATPases General function prediction only 86607187 Common - hypothetical protein CYA_2568 10 None None None 86605565 Common - hypothetical protein CYA_0861 46 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 86605619 Common ksgA dimethyladenosine transferase CYA_0917 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 86605233 Common cdsA phosphatidate cytidylyltransferase CYA_0516 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 86605970 Common trpA-2 tryptophan synthase, alpha subunit CYA_1290 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 86607286 Common - polar amino acid ABC transporter (PAAT) family, amino acid-binding protein CYA_2674 118 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 86605674 Nonpathogen - hypothetical protein CYA_0974 2 None None None 86605888 Common - hydrolase, alpha/beta fold family CYA_1202 41 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86605702 Common - putative transporter, HlyC/CorC (HCC) family CYA_1003 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 86606403 Common psbA-2 photosystem II protein D1 CYA_1748 10 None None None 86607423 Common - putative RNA-binding protein CYA_2821 62 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 86606794 Nonpathogen - hypothetical protein CYA_2153 1 None None None 86604744 Common thiC thiamine biosynthesis protein ThiC CYA_0011 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 86607469 Nonpathogen - hypothetical protein CYA_2869 7 None None None 86606614 Common - phosphoglucomutase CYA_1969 202 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 86606769 Nonpathogen - hypothetical protein CYA_2129 1 None None None 86606895 Common - hypothetical protein CYA_2258 96 COG0393 COG0393, Uncharacterized conserved protein Function unknown 86606625 Common - putative phosphoketolase CYA_1981 66 COG3957 COG3957, Phosphoketolase Carbohydrate transport and metabolism 86605265 Common - acetyltransferase, GNAT family CYA_0548 68 COG0456 RimI, Acetyltransferases General function prediction only 86606328 Nonpathogen - hypothetical protein CYA_1671 1 None None None 86606370 Common - conserved hypothetical protein TIGR00726 CYA_1715 176 COG1496 COG1496, Uncharacterized conserved protein Function unknown 86605598 Common chlB light-independent protochlorophyllide reductase subunit B CYA_0895 49 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 86606842 Nonpathogen - hypothetical protein CYA_2203 1 None None None 86604831 Nonpathogen - hypothetical protein CYA_0102 5 None None None 86606552 Common ruvC crossover junction endodeoxyribonuclease RuvC CYA_1905 197 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 86607375 Nonpathogen - hypothetical protein CYA_2772 1 None None None 86605941 Common prk phosphoribulokinase CYA_1258 91 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 86606055 Common - hypothetical protein CYA_1386 40 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 86606585 Common - hypothetical protein CYA_1939 10 None None None 86605434 Common - hypothetical protein CYA_0722 9 None None None 86606666 Nonpathogen - hypothetical protein CYA_2026 1 None None None 86606393 Common - putative permease CYA_1738 37 COG0701 COG0701, Predicted permeases General function prediction only 86606106 Common - ISSoc2, transposase CYA_1438 12 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605292 Common - putative UDP-sulfoquinovose synthase CYA_0577 121 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 86606540 Common - peptide/opine/nickel ABC transporter (PepT) family, ATP-binding protein CYA_1893 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 86607381 Common - sensor histidine kinase CYA_2779 222 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 86606598 Common - RNA methyltransferase, TrmH family, group 1 CYA_1953 158 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 86604742 Common - phosphoglucomutase/phosphomannomutase family protein CYA_0009 234 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 86606780 Nonpathogen - hypothetical protein CYA_2140 1 None None None 86605393 Nonpathogen - hypothetical protein CYA_0682 1 None None None 86607393 Common pilT-2 twitching mobility protein PilT CYA_2791 221 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 86605924 Common - hypothetical protein CYA_1241 11 COG3889 COG3889, Predicted solute binding protein General function prediction only 86607169 Common - hypothetical protein CYA_2550 26 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86607067 Common yfiA ribosomal subunit interface protein CYA_2445 169 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 86607252 Common - ISSoc4, transposase orfA CYA_2639 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606654 Common - putative transposase, truncation CYA_2012 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605672 Common - putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase CYA_0972 134 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 86606789 Nonpathogen - hypothetical protein CYA_2149 1 None None None 86606446 Common - hypothetical protein CYA_1793 9 None None None 86607203 Nonpathogen - hypothetical protein CYA_2584 1 None None None 86605231 Nonpathogen - putative lipoprotein CYA_0514 1 None None None 86604792 Nonpathogen - hypothetical protein CYA_0060 1 None None None 86606130 Common alr alanine racemase CYA_1462 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 86605548 Common map-1 methionine aminopeptidase CYA_0844 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 86606334 Common - manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein CYA_1678 193 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 86605859 Common rplP 50S ribosomal protein L16 CYA_1171 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 86606175 Common - putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein CYA_1509 17 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 86606503 Common - TPR repeat protein CYA_1852 44 COG4421 COG4421, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism 86606464 Common psbA-3 photosystem II protein D1 CYA_1811 15 None None None 86606714 Nonpathogen - hypothetical protein CYA_2074 1 None None None 86604903 Common - pilin domain protein CYA_0177 23 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 86607164 Common cmr4 CRISPR-associated RAMP protein, Cmr4 family CYA_2545 18 COG1336 COG1336, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86604886 Common - ISSoc3, orfB transposase CYA_0158 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605448 Common - hypothetical protein CYA_0736 85 COG2378 COG2378, Predicted transcriptional regulator Transcription 86606265 Common - ISSoc4, transposase orfAB CYA_1604 59 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607176 Common - ferredoxin-thioredoxin reductase, catalytic beta subunit CYA_2557 10 COG4802 FtrB, Ferredoxin-thioredoxin reductase, catalytic subunit Energy production and conversion 86606155 Nonpathogen - hypothetical protein CYA_1488 1 None None None 86605872 Nonpathogen - hypothetical protein CYA_1185 1 None None None 86605937 Common - hypothetical protein CYA_1254 198 COG0628 PerM, Predicted permease General function prediction only 86606064 Common recO DNA repair protein RecO CYA_1394 51 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 86606467 Common - tetratricopeptide repeat protein CYA_1816 35 COG4421 COG4421, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism 86604924 Nonpathogen - hypothetical protein CYA_0200 5 None None None 86605551 Common murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase CYA_0847 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 86605339 Common - HD domain protein CYA_0624 105 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 86605092 Common - serine/threonine protein kinase CYA_0373 154 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86606028 Nonpathogen - hypothetical protein CYA_1356 1 None None None 86607100 Common - hydrophobic amino acid ABC transporter (HAAT) family, permease protein CYA_2479 156 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 86606172 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CYA_1505 191 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 86606923 Common - Ser/Thr protein phosphatase family protein CYA_2289 8 COG1409 Icc, Predicted phosphohydrolases General function prediction only 86605712 Common - hypothetical protein CYA_1013 10 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86607060 Common pyrE orotate phosphoribosyltransferase CYA_2438 204 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 86606757 Common atpE F0F1 ATP synthase subunit C CYA_2117 16 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 86606340 Common - hypothetical protein CYA_1684 9 COG3083 COG3083, Predicted hydrolase of alkaline phosphatase superfamily General function prediction only 86606852 Common - hypothetical protein CYA_2213 7 None None None 86605388 Common - hypothetical protein CYA_0676 6 None None None 86605824 Common - ISSoc3, orfB transposase CYA_1136 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606647 Common - hypothetical protein CYA_2004 11 None None None 86606572 Common - transglycosylase, SLT family CYA_1926 170 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 86606823 Common - starch binding domain protein CYA_2183 5 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 86607148 Nonpathogen - hypothetical protein CYA_2528 1 None None None 86606723 Nonpathogen - transporter, sulfate permease (SulP) family, truncation CYA_2083 1 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 86605628 Common - ParB nuclease domain protein CYA_0926 8 COG5119 COG5119, Uncharacterized protein, contains ParB-like nuclease domain General function prediction only 86605787 Common - hypothetical protein CYA_1098 15 None None None 86605480 Common - RNA pseudouridine synthase family protein CYA_0773 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 86607001 Common - PAP/fibrillin family protein CYA_2374 9 None None None 86604760 Common - ferredoxin, 2Fe-2S CYA_0027 56 COG0633 Fdx, Ferredoxin Energy production and conversion 86606085 Common - hypothetical protein CYA_1416 10 None None None 86605371 Common - hypothetical protein CYA_0658 7 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606835 Common - transcriptional regulator, AbrB family CYA_2195 10 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 86605511 Common - hypothetical protein CYA_0805 7 None None None 86606311 Common - iron-sulfur cluster assembly accessory protein CYA_1655 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 86607157 Common - hypothetical protein CYA_2537 119 COG1690 RtcB, Uncharacterized conserved protein Function unknown 86604781 Nonpathogen - hypothetical protein CYA_0049 9 None None None 86607133 Common hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CYA_2513 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 86606356 Common - tetratricopeptide repeat protein CYA_1700 132 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 86606038 Common - hypothetical protein CYA_1367 9 None None None 86605282 Common - putative alpha-isopropylmalate/homocitrate synthase family transferase CYA_0566 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 86604833 Common argH argininosuccinate lyase CYA_0103 238 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 86606549 Common kaiA circadian clock protein KaiA CYA_1902 8 None None None 86605273 Common cysE serine O-acetyltransferase CYA_0556 189 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 86606031 Common - ISSoc5, transposase, truncation CYA_1359 30 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606351 Common - hypothetical protein CYA_1695 13 COG3463 COG3463, Predicted membrane protein Function unknown 86606523 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase CYA_1875 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 86606685 Common pheS phenylalanyl-tRNA synthetase, alpha subunit CYA_2045 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 86606514 Common - peptidase, M48B family CYA_1864 123 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 86606244 Common - carbohydrate ABC transporter-2 (CUT2) family, permease protein CYA_1581 108 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 86605459 Common - carboxymuconolactone decarboxylase family protein CYA_0749 88 COG2128 COG2128, Uncharacterized conserved protein Function unknown 86606882 Common - hypothetical protein CYA_2245 10 None None None 86607463 Common - fructosamine kinase family protein CYA_2863 70 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 86605247 Common menB naphthoate synthase CYA_0530 180 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 86606682 Common cpcA-2 phycocyanin, alpha subunit CYA_2042 10 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 86605568 Common - transporter, major facilitator family CYA_0864 148 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 86606365 Nonpathogen - hypothetical protein CYA_1710 1 None None None 86604826 Common - hypothetical protein CYA_0096 10 None None None 86606142 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase CYA_1476 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 86606078 Common - hypothetical protein CYA_1408 13 COG4328 COG4328, Uncharacterized protein conserved in bacteria Function unknown 86605369 Common clpC Clp protease, ATP-binding subunit ClpC CYA_0656 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 86607247 Nonpathogen - putative DNA-binding protein CYA_2633 5 COG1396 HipB, Predicted transcriptional regulators Transcription 86607343 Common - response regulator CYA_2739 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86604964 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase CYA_0240 196 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 86605834 Nonpathogen - hypothetical protein CYA_1147 2 None None None 86605141 Common - tetrapyrrole methylase family protein CYA_0422 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 90296796 Common - hypothetical protein CYA_1579 22 COG5483 COG5483, Uncharacterized conserved protein Function unknown 86605297 Common - HD domain protein CYA_0581 43 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 86605760 Common - NitT/TauT family ABC transporter, permease protein CYA_1065 100 COG4986 COG4986, ABC-type anion transport system, duplicated permease component Inorganic ion transport and metabolism 86604857 Common - hypothetical protein CYA_0127 32 COG2261 COG2261, Predicted membrane protein Function unknown 86607414 Common rplT 50S ribosomal protein L20 CYA_2812 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 86606494 Common - transcriptional regulator PatB CYA_1843 88 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 86606935 Common - hypothetical protein CYA_2301 9 None None None 86605426 Common - GTP-binding protein domain CYA_0713 92 COG0486 ThdF, Predicted GTPase General function prediction only 86606413 Nonpathogen - hypothetical protein CYA_1759 1 None None None 86606316 Nonpathogen - hypothetical protein CYA_1660 1 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 86606010 Common - oxidoreductase, zinc-binding dehydrogenase family CYA_1334 167 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 86607235 Common - hydrophobic amino acid ABC transporter (HAAT) family, amino acid-binding protein CYA_2621 151 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 86605411 Common - oxidoreductase, 2OG-Fe(II) oxygenase family CYA_0699 54 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 86607141 Common psaA photosystem I P700 chlorophyll a apoprotein A1 CYA_2521 14 None None None 86606993 Common plsX fatty acid/phospholipid synthesis protein CYA_2367 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 86605466 Common ftsY signal recognition particle-docking protein FtsY CYA_0759 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 86606932 Nonpathogen - hypothetical protein CYA_2299 4 None None None 86606225 Common - putative chromosome partitioning protein ParA CYA_1561 175 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 86606697 Common - peptidase, M28A family CYA_2057 50 COG2234 Iap, Predicted aminopeptidases General function prediction only 86607307 Common - putative guanylate kinase CYA_2697 213 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 86604809 Common - fasciclin domain protein CYA_0079 68 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 86607154 Common - cyclopropane fatty acyl phospholipid synthase CYA_2534 148 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 86606822 Nonpathogen - hypothetical protein CYA_2182 3 None None None 86606739 Nonpathogen - hypothetical protein CYA_2099 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86606959 Common - nuclear export factor GLE1-like protein CYA_2332 27 COG4549 COG4549, Uncharacterized protein conserved in bacteria Function unknown 86605124 Common panE-1 2-dehydropantoate 2-reductase CYA_0405 116 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 86605476 Common trx-1 thioredoxin CYA_0769 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 86605360 Common - response regulator CYA_0647 194 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 86606608 Common - mandelate racemase/muconate lactonizing enzyme family protein CYA_1963 125 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 86605259 Common glpX fructose 1,6-bisphosphatase II CYA_0542 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 86606859 Common - ISSoc3, orfA transposase CYA_2221 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605107 Common opcA opcA protein CYA_0388 25 COG3429 COG3429, Glucose-6-P dehydrogenase subunit Carbohydrate transport and metabolism 86606017 Common - hypothetical protein CYA_1341 10 None None None 86605214 Common - putative gamma-glutamyl phosphate reductase CYA_0496 187 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 86604946 Nonpathogen - hypothetical protein CYA_0222 1 None None None 86607300 Nonpathogen - FHA domain protein CYA_2690 5 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 86606279 Common rplS 50S ribosomal protein L19 CYA_1619 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 86604788 Common dnaE DNA polymerase III subunit alpha CYA_0057 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 86605082 Nonpathogen - hypothetical protein CYA_0363 1 None None None 86605004 Common ppnK inorganic polyphosphate/ATP-NAD kinase CYA_0282 237 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 86604893 Common - hypothetical protein CYA_0165 70 COG0433 COG0433, Predicted ATPase General function prediction only 86605166 Common - D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein CYA_0447 54 COG3957 COG3957, Phosphoketolase Carbohydrate transport and metabolism 86606802 Common - response regulator CYA_2162 222 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 86605697 Common - ISSoc4, transposase orfB CYA_0998 53 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606812 Common - peptidase M16B family, nonpeptidase-like protein CYA_2172 173 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 86605355 Nonpathogen - hypothetical protein CYA_0641 1 None None None 86605135 Nonpathogen - hypothetical protein CYA_0416 1 None None None 86605238 Nonpathogen - hypothetical protein CYA_0521 1 None None None 86605953 Common accB acetyl-CoA carboxylase, biotin carboxyl carrier protein CYA_1271 196 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 86605801 Common ald alanine dehydrogenase CYA_1112 167 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 86605660 Common - hypothetical protein CYA_0958 2 None None None 86606617 Common - glycosyl hydrolase, family 57 CYA_1973 20 COG1449 COG1449, Alpha-amylase/alpha-mannosidase Carbohydrate transport and metabolism 86606373 Common - hypothetical protein CYA_1719 15 COG2149 COG2149, Predicted membrane protein Function unknown 86606003 Common psbH photosystem II reaction center protein PsbH CYA_1326 10 None None None 86605572 Common - hypothetical protein CYA_0868 10 None None None 86607096 Common - transcriptional regulator, GntR family CYA_2474 68 COG1725 COG1725, Predicted transcriptional regulators Transcription 86606634 Common - OmpA family protein CYA_1991 167 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 86607107 Common - hypothetical protein CYA_2486 30 COG3150 COG3150, Predicted esterase General function prediction only 86605040 Common - ATP-dependent helicase, DEAD/DEAH box family CYA_0318 131 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 86605755 Common - putative methylated-DNA-[protein]-cysteine S-methyltransferase CYA_1060 77 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 86606288 Nonpathogen - hypothetical protein CYA_1628 2 None None None 86606163 Common - NADPH-dependent FMN reductase CYA_1496 92 COG0431 COG0431, Predicted flavoprotein General function prediction only 86606231 Common - hypothetical protein CYA_1566 15 COG4370 COG4370, Uncharacterized protein conserved in bacteria Function unknown 86605867 Common - hypothetical protein CYA_1179 11 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 86605963 Common - TatC family protein, truncation CYA_1280 10 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 86605988 Common - hypothetical protein CYA_1307 9 None None None 86606965 Common infB translation initiation factor IF-2 CYA_2338 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 86607330 Common - putative outer membrane protein CYA_2726 85 COG2968 COG2968, Uncharacterized conserved protein Function unknown 86607076 Common thrC-2 threonine synthase CYA_2454 224 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 86606636 Common - hypothetical protein CYA_1993 9 None None None 86606218 Common pstA-1 phosphate ABC transporter, permease protein PtsA CYA_1554 225 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 86606664 Common recF recombination protein F CYA_2022 160 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 86605331 Common ntrD-1 nitrate ABC transporter, ATP-binding protein NtrD CYA_0616 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 86605203 Common - UDP-glucose dehydrogenase CYA_0485 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 86605413 Common - hypothetical protein CYA_0701 10 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 86607034 Common rpoD RNA polymerase sigma factor RpoD CYA_2410 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 86607436 Nonpathogen - hypothetical protein CYA_2833 1 None None None 86606092 Nonpathogen - hypothetical protein CYA_1424 1 None None None 86606949 Common - cobalt transport protein CbiM CYA_2321 46 COG0310 CbiM, ABC-type Co2+ transport system, permease component Inorganic ion transport and metabolism 86604762 Common - peptidase, M48B family CYA_0029 182 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 86605667 Common - transcriptional regulator, Crp/Fnr family CYA_0966 27 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 86605470 Common - pspA/IM30 family protein CYA_0763 10 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 86607049 Nonpathogen psbJ photosystem II reaction center protein PsbJ CYA_2427 1 None None None 86607454 Common - polysaccharide pyruvyl transferase CYA_2854 34 COG2327 WcaK, Uncharacterized conserved protein Function unknown 86607125 Nonpathogen - hypothetical protein CYA_2505 1 None None None 86605021 Common - MoaD family protein CYA_0300 60 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 86606771 Nonpathogen - hypothetical protein CYA_2131 1 None None None 86606270 Common - putative cobalt ABC transporter (CoT) family, ATP-binding protein CYA_1609 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 86606426 Common - ISSoc2, resolvase CYA_1772 24 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86607481 Common - hypothetical protein CYA_2881 42 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 86606452 Common ntcA nitrogen-responsive regulatory protein CYA_1799 136 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 86605826 Common - CsgG family protein CYA_1138 22 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 86605069 Common - UvrD/REP helicase domain protein CYA_0349 213 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 86605847 Common adk adenylate kinase CYA_1159 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 86606298 Common - amidohydrolase family protein CYA_1640 162 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 86607274 Common - CBS domain protein CYA_2662 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 86607223 Common - putative iron-regulated protein A CYA_2608 39 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 86604952 Common - polar amino acid uptake ABC transporter (PAAT) family, ATP-binding protein, truncation CYA_0228 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 86607501 Common smc chromosome segregation protein SMC CYA_2903 176 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86605398 Common - cystine ABC transporter, permease protein CYA_0686 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 86605241 Nonpathogen - putative phycobilisome protein CYA_0524 1 None None None 86604845 Nonpathogen - hypothetical protein CYA_0115 1 None None None 86607152 Common - putative zinc ABC transporter, zinc-binding protein CYA_2532 177 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 86606186 Common - nicotinate phosphoribosyltransferase CYA_1521 124 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 86605452 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 CYA_0742 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 86606354 Common fbp fructose-1,6-bisphosphatase CYA_1698 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 86606150 Common gvpK HAD hydrolase-like protein/gas vesicle protein K CYA_1483 12 COG0546 Gph, Predicted phosphatases General function prediction only 86605575 Common - hypothetical protein CYA_0872 16 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 86605723 Common msrB methionine-R-sulfoxide reductase CYA_1027 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 86606909 Common - putative general secretory pathway protein CYA_2273 24 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 86605509 Common ligA DNA ligase, NAD-dependent CYA_0803 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 86606303 Common - ISSoc2, transposase CYA_1646 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605844 Common - hydrolase, alpha/beta fold family CYA_1156 66 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86607406 Common pip prolyl aminopeptidase CYA_2804 104 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86606831 Common mscL large conductance mechanosensitive channel protein CYA_2192 136 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 86605383 Common - D-alanyl-D-alanine carboxypeptidase CYA_0671 54 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 86604910 Common - oxidoreductase, FAD-binding CYA_0185 14 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 86606136 Nonpathogen - hypothetical protein CYA_1469 1 None None None 86604935 Common - histone deacetylase family protein CYA_0211 161 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 86607018 Common - ISSoc2, resolvase CYA_2392 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606250 Common - hypothetical protein CYA_1586 10 None None None 86605103 Nonpathogen - hypothetical protein CYA_0384 1 None None None 86604892 Nonpathogen - hypothetical protein CYA_0163 2 None None None 86604828 Nonpathogen - hypothetical protein CYA_0098 1 None None None 86607231 Common - VKORC1/thioredoxin domain protein CYA_2617 11 COG4243 COG4243, Predicted membrane protein Function unknown 86606159 Common - hypothetical protein CYA_1492 53 COG2343 COG2343, Uncharacterized protein conserved in bacteria Function unknown 86607111 Common pcyA phycocyanobilin:ferredoxin oxidoreductase CYA_2492 11 None None None 86606587 Common - hypothetical protein CYA_1941 34 COG1900 COG1900, Uncharacterized conserved protein Function unknown 86606557 Common - response regulator CYA_1910 35 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86605608 Common - antioxidant, AhpC/Tsa family CYA_0907 233 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86605306 Nonpathogen - hypothetical protein CYA_0590 3 None None None 86605816 Common - ISSoc4, transposase orfB CYA_1127 53 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605495 Common - hypothetical protein CYA_0789 25 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 86606326 Nonpathogen - hypothetical protein CYA_1670 1 None None None 86605665 Common - hypothetical protein CYA_0965 10 None None None 86606196 Common - peptidase, M23B family CYA_1531 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 86605791 Common - hypothetical protein CYA_1103 11 None None None 86607474 Common acpP acyl carrier protein CYA_2874 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 86605690 Common - hypothetical protein CYA_0991 87 COG2510 COG2510, Predicted membrane protein Function unknown 86605865 Common rplD ribosomal protein L4 CYA_1177 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 86607391 Common - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit-like protein CYA_2789 28 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86605798 Common - hypothetical protein CYA_1109 18 COG3420 NosD, Nitrous oxidase accessory protein Inorganic ion transport and metabolism 86605591 Nonpathogen - hypothetical protein CYA_0889 2 None None None 86607263 Common - TPR repeat protein CYA_2651 8 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 86605853 Common rpsH 30S ribosomal protein S8 CYA_1165 244 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 86604776 Nonpathogen - hypothetical protein CYA_0044 2 None None None 86605327 Common nirA ferredoxin-nitrite reductase CYA_0612 167 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 86605881 Common rbcX chaperon-like protein RbcX CYA_1195 9 None None None 86606259 Common - putative soluble hydrogenase, tritium exchange subunit CYA_1597 166 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 86605617 Common - PIN/TRAM domain protein CYA_0915 53 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 86606805 Common - hypothetical protein CYA_2165 6 None None None 86607296 Common - ISSoc2, transposase CYA_2685 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605676 Common tas aldo/keto reductase Tas CYA_0976 200 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 86604751 Common surE stationary phase survival protein SurE CYA_0017 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 86606124 Nonpathogen - hypothetical protein CYA_1456 2 None None None 86605920 Common - polyamine ABC transporter, polyamine-binding protein CYA_1237 110 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 86604817 Common - carbohydrate kinase family protein CYA_0088 221 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 86605743 Common phhB pterin-4-alpha-carbinolamine dehydratase CYA_1048 130 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 86605077 Common - cation transporter, voltage-gated ion channel (VIC) family CYA_0358 118 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 86605350 Common sasA adaptive-response sensory kinase CYA_0637 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86605071 Common - NADPH-dependent FMN reductase CYA_0352 52 COG0431 COG0431, Predicted flavoprotein General function prediction only 86605026 Common hup-1 DNA-binding protein HU CYA_0305 144 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 86606691 Common rpmA 50S ribosomal protein L27 CYA_2051 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 86606999 Common cbiX sirohydrochlorin cobaltochelatase CYA_2373 70 COG2138 COG2138, Uncharacterized conserved protein Function unknown 86606593 Common - carbohydrate kinase, FGGY family CYA_1947 107 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 86605450 Common - pseudouridine synthase, RluA family CYA_0740 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 86605918 Common - putative lipoprotein CYA_1235 13 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 86606531 Nonpathogen - hypothetical protein CYA_1883 1 None None None 86605394 Common - hypothetical protein CYA_0681 30 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 86605688 Nonpathogen - hypothetical protein CYA_0988 1 None None None 86606435 Nonpathogen - hypothetical protein CYA_1781 1 None None None 86606336 Common - cation ABC transporter, cation-binding protein CYA_1680 152 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 86606700 Common - hypothetical protein CYA_2060 73 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86607084 Common - putative iron-sulfur cluster-binding protein CYA_2462 13 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 86606223 Common sat sulfate adenylyltransferase CYA_1559 64 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 86604908 Common phoU phosphate transport system regulatory protein PhoU CYA_0182 196 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 86605404 Common - GTP-binding domain protein CYA_0693 80 COG0486 ThdF, Predicted GTPase General function prediction only 86605973 Nonpathogen - hypothetical protein CYA_1292 3 None None None 86606501 Common ruvB Holliday junction DNA helicase B CYA_1850 219 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 86605235 Nonpathogen - hypothetical protein CYA_0518 1 None None None 86606269 Common - hypothetical protein CYA_1608 10 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 86605444 Common cse4 CRISPR-associated protein, Cse4 family CYA_0732 42 None None None 86607008 Common chlL protochlorophyllide reductase iron-sulfur ATP-binding protein CYA_2382 77 COG1348 NifH, Nitrogenase subunit NifH (ATPase) Inorganic ion transport and metabolism 86605184 Common xth exodeoxyribonuclease III CYA_0466 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 86605521 Common aspC aspartate aminotransferase CYA_0815 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 86607185 Common - putative cobalamin biosynthesis protein CobW CYA_2566 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 86606249 Common codA cytosine deaminase CYA_1587 71 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 86606442 Common ubiA tocopherol phytyltransferase CYA_1788 36 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 86606405 Common - putative monovalent cation/H+ antiporter subunit B CYA_1750 13 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 86607487 Common prs ribose-phosphate pyrophosphokinase CYA_2887 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 86606387 Common pstS-3 phosphate ABC transporter, phosphate-binding protein CYA_1732 131 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 86606776 Common trpE anthranilate synthase component I CYA_2136 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 86606395 Common - hypothetical protein CYA_1740 27 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 86605636 Common - hypothetical protein CYA_0934 5 None None None 86606554 Common - hypothetical protein CYA_1907 14 COG4947 COG4947, Uncharacterized protein conserved in bacteria Function unknown 86606321 Common - YihY family protein CYA_1665 50 COG1295 Rbn, Predicted membrane protein Function unknown 86606791 Common - phospholipase D/competence protein ComEA helix-hairpin-helix domain protein CYA_2151 90 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 86605118 Common treY malto-oligosyltrehalose synthase CYA_0399 93 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 86605943 Nonpathogen - hypothetical protein CYA_1260 1 None None None 86605563 Common speB agmatinase CYA_0859 145 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 86604859 Common pstS-1 phosphate ABC transporter, phosphate-binding protein CYA_0129 118 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 86606314 Common - calcium-translocating P-type ATPase, PMCA-type CYA_1658 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 86605751 Common thiG thiazole synthase CYA_1056 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 86606273 Common ccmK-2 carbon dioxide concentrating mechanism protein CcmK CYA_1612 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 86606671 Common - transporter, TonB-dependent heme/hemoglobin receptor family CYA_2031 127 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 86606616 Nonpathogen - hypothetical protein CYA_1970 2 None None None 86605886 Common - PhoH family protein CYA_1201 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 86606057 Nonpathogen - hypothetical protein CYA_1387 9 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86605010 Common - ferredoxin, 2Fe-2S CYA_0289 96 COG0633 Fdx, Ferredoxin Energy production and conversion 86605719 Common - hypothetical protein CYA_1023 10 None None None 86607491 Common - aminotransferase, class V CYA_2891 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 86604867 Common - hypothetical protein CYA_0137 38 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 86606415 Nonpathogen - putative ABC-2 type transporter, permease protein CYA_1761 11 None None None 86605362 Common purS phosphoribosylformylglycinamidine synthase, PurS protein CYA_0648 112 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 86607027 Common - hypothetical protein CYA_2402 8 None None None 86605630 Common - hypothetical protein CYA_0928 26 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 86605325 Common - SCP family protein CYA_0610 4 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 86607496 Common miaB tRNA-i(6)A37 thiotransferase enzyme MiaB CYA_2897 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 86605045 Common gap-2 glyceraldehyde-3-phosphate dehydrogenase, type I CYA_0325 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 86604899 Common moaC molybdenum cofactor biosynthesis protein C CYA_0171 196 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 86605253 Common psaD photosystem I reaction center subunit II CYA_0536 10 None None None 86604919 Common murE UDP-N-acetylmuramyl-tripeptide synthetase CYA_0196 208 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 86605913 Common - gas vesicle protein, GvpL/GvpF family CYA_1230 16 None None None 86606113 Common prfA peptide chain release factor 1 CYA_1445 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 86605526 Common - ribonuclease, Rne/Rng family CYA_0821 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 86606050 Nonpathogen - DnaJ domain protein CYA_1381 1 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86604906 Common clpB ATP-dependent chaperone protein ClpB CYA_0180 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 86606818 Common - transporter, major facilitator family CYA_2178 30 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 86606678 Common mviN integral membrane protein MviN CYA_2038 181 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 86605314 Nonpathogen - hypothetical protein CYA_0598 4 COG5179 TAF1, Transcription initiation factor TFIID, subunit TAF1 Transcription 86607020 Common - DNA-binding response regulator CYA_2394 207 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86606894 Common rbsK ribokinase CYA_2257 134 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 86604738 Common - oxidoreductase, short chain dehydrogenase/reductase family CYA_0005 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 86605446 Common cse1 CRISPR-associated protein, Cse1 family CYA_0734 18 None None None 86607280 Nonpathogen - hypothetical protein CYA_2668 2 None None None 86604774 Common - WD domain, G-beta repeat protein CYA_0042 68 COG2319 COG2319, FOG: WD40 repeat General function prediction only 86606331 Common gidB glucose-inhibited division protein B CYA_1675 165 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 86605219 Common - transporter, monovalent cation:proton antiporter-2 (CPA2) family/universal stress family protein CYA_0502 30 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 86605267 Nonpathogen - hypothetical protein CYA_0551 1 None None None 86604976 Common - putative cytochrome c-type biogenesis protein ResB CYA_0254 41 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 86605537 Nonpathogen - hypothetical protein CYA_0833 3 None None None 86605642 Common hup-2 DNA-binding protein HU CYA_0940 206 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 86605756 Common - hypothetical protein CYA_1061 8 None None None 86607336 Common argS arginyl-tRNA synthetase CYA_2732 245 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606564 Common - isochorismatase family protein CYA_1918 137 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 86604854 Nonpathogen - hypothetical protein CYA_0124 1 None None None 86604821 Common - ISSoc1, transposase CYA_0091 51 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606485 Common nifE nitrogenase MoFe cofactor biosynthesis protein NifE CYA_1834 55 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 86606379 Common - hypothetical protein CYA_1723 11 COG4071 COG4071, Uncharacterized protein conserved in archaea Function unknown 86605814 Common - transcriptional regulator, ArsR family CYA_1125 178 COG0640 ArsR, Predicted transcriptional regulators Transcription 86606643 Common - hypothetical protein CYA_2000 8 None None None 86605785 Common - hypothetical protein CYA_1095 90 COG2135 COG2135, Uncharacterized conserved protein Function unknown 86606837 Nonpathogen - nodulation efficiency family protein CYA_2197 9 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86607131 Nonpathogen - hypothetical protein CYA_2511 1 None None None 86605516 Nonpathogen - hypothetical protein CYA_0810 1 None None None 86607155 Nonpathogen - hypothetical protein CYA_2535 1 None None None 86605489 Common - putative membrane-bound protease CYA_0782 84 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 86607326 Common - hypothetical protein CYA_2718 189 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 86606684 Common cpeT CpeT protein CYA_2044 11 None None None 86605189 Common sbp sulfate ABC transporter, sulfate-binding protein CYA_0471 90 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 86605958 Nonpathogen - hypothetical protein CYA_1276 1 None None None 86606342 Common - putative cytochrome CYA_1686 10 None None None 86607162 Common - hypothetical protein CYA_2543 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606385 Common pyrB aspartate carbamoyltransferase catalytic subunit CYA_1730 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 86605240 Nonpathogen - putative phycobilisome protein CYA_0523 4 None None None 86606890 Common - uracil-DNA glycosylase, family 4 CYA_2253 152 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 86605874 Nonpathogen - putative lipoprotein CYA_1187 1 None None None 86607342 Common - response regulator CYA_2738 221 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 86605272 Nonpathogen - hypothetical protein CYA_0557 1 None None None 86604790 Common - hydrolase, carbon-nitrogen family CYA_0058 203 COG0388 COG0388, Predicted amidohydrolase General function prediction only 86605205 Nonpathogen - hypothetical protein CYA_0487 1 None None None 86606521 Common - hypothetical protein CYA_1872 6 None None None 86606492 Nonpathogen - FeoA domain protein CYA_1841 1 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 86606169 Nonpathogen - hypothetical protein CYA_1502 1 None None None 86607465 Common - putative small GTP-binding protein CYA_2865 32 COG2229 COG2229, Predicted GTPase General function prediction only 86606709 Common - hypothetical protein CYA_2069 10 None None None 86606367 Common pyrF orotidine 5'-phosphate decarboxylase CYA_1712 174 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 86606687 Common - hypothetical protein CYA_2047 9 None None None 86605373 Common - hypothetical protein CYA_0660 5 None None None 86607089 Common hslO Hsp33-like chaperonin CYA_2467 110 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 86607418 Common - proton transporter, ExbD/TolR family CYA_2816 106 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 86606854 Common - pentapeptide repeat family protein CYA_2215 95 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606512 Common frr ribosome recycling factor CYA_1862 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 86605922 Nonpathogen - hypothetical protein CYA_1239 2 COG5416 COG5416, Uncharacterized integral membrane protein Function unknown 86606574 Common - DnaJ domain protein CYA_1929 224 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86607347 Common - hypothetical protein CYA_2743 49 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 86604873 Common - pyridoxamine 5'-phosphate oxidase family protein CYA_0144 37 COG0748 HugZ, Putative heme iron utilization protein Inorganic ion transport and metabolism 86606880 Nonpathogen - hypothetical protein CYA_2242 1 None None None 86606871 Common - RNA polymerase sigma factor CYA_2233 131 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 86607065 Common - hypothetical protein CYA_2444 8 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 86604868 Common - hypothetical protein CYA_0138 8 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86607205 Common - ISSoc3, orfA transposase CYA_2587 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606848 Common - hypothetical protein CYA_2208 9 None None None 86606170 Common - SUF system FeS assembly protein, NifU family CYA_1503 163 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 86606499 Common - hypothetical protein CYA_1848 48 COG1615 COG1615, Uncharacterized conserved protein Function unknown 86606732 Nonpathogen - hypothetical protein CYA_2092 1 None None None 86605098 Nonpathogen - hypothetical protein CYA_0379 1 None None None 86606596 Common - hypothetical protein CYA_1950 9 None None None 86605935 Common - GAF domain protein CYA_1252 125 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 86605290 Common - S-adenosylmethionine decarboxylase proenzyme CYA_0574 75 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 86605602 Common - nucleotidyltransferase domain protein CYA_0900 46 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 86606059 Common - riboflavin biosynthesis protein RibD C-terminal domain protein CYA_1389 44 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 86604769 Common - ISSoc4, transposase orfA CYA_0037 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607254 Common - transporter, folate-biopterin transporter (FBT) family CYA_2642 14 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 86606649 Common - tetratricopeptide repeat protein CYA_2006 159 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 86605019 Common thrC-1 threonine synthase CYA_0298 187 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 86607452 Common - phospholipase/carboxylesterase CYA_2852 97 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 86607195 Nonpathogen - response regulator CYA_2576 3 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86605428 Nonpathogen - hypothetical protein CYA_0716 1 None None None 86607268 Common - ankyrin repeat protein CYA_2656 59 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 86605704 Common ilvE branched-chain amino acid aminotransferase CYA_1005 218 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 86607240 Common - RNA pseudouridine synthase family protein CYA_2627 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 86605182 Common - hypothetical protein CYA_0464 63 COG1432 COG1432, Uncharacterized conserved protein Function unknown 86605594 Common ntrC-2 nitrate ABC transporter, ATP-binding protein NtrC CYA_0892 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 86605490 Nonpathogen - hypothetical protein CYA_0783 1 None None None 86606787 Common - GTP-binding domain protein CYA_2147 20 COG0486 ThdF, Predicted GTPase General function prediction only 86604746 Common - hypothetical protein CYA_0013 10 None None None 86606629 Common - acetyltransferase, GNAT family CYA_1986 15 COG0456 RimI, Acetyltransferases General function prediction only 86606466 Common - putative phycobilisome 120 kDa linker polypeptide, core CYA_1814 10 None None None 86605857 Common rpsQ 30S ribosomal protein S17 CYA_1169 224 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 86604782 Nonpathogen - TPR repeat protein CYA_0050 1 COG5187 RPN7, 26S proteasome regulatory complex component, contains PCI domain Posttranslational modification, protein turnover, chaperones 86605718 Common - leucine rich repeat protein CYA_1022 33 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 86605632 Common - CbiX family protein CYA_0930 23 COG2138 COG2138, Uncharacterized conserved protein Function unknown 86605732 Common - hypothetical protein CYA_1037 10 None None None 86606247 Common - Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein CYA_1584 103 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 86607206 Nonpathogen - hypothetical protein CYA_2589 1 None None None 86606469 Common - NifT/FixU family protein CYA_1818 5 COG5554 NifU, Nitrogen fixation protein Secondary metabolites biosynthesis, transport, and catabolism 86604884 Common - DNA-directed RNA polymerase subunit omega CYA_0155 10 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 86605337 Common purD phosphoribosylamine--glycine ligase CYA_0622 232 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 86606253 Common - hypothetical protein CYA_1590 8 None None None 86607046 Common - hypothetical protein CYA_2423 22 COG2119 COG2119, Predicted membrane protein Function unknown 86607105 Common ggt gamma-glutamyltransferase CYA_2484 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 86605117 Common tpiA triosephosphate isomerase CYA_0398 217 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 86605199 Common - hydrolase, alpha/beta fold family CYA_0481 165 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86606991 Common fabD malonyl CoA-acyl carrier protein transacylase CYA_2365 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 86605961 Common - ISSoc4, transposase orfAB CYA_1279 61 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605699 Nonpathogen - hypothetical protein CYA_1000 1 None None None 86606094 Common - ferredoxin, 2Fe-2S CYA_1426 92 COG0633 Fdx, Ferredoxin Energy production and conversion 86606716 Nonpathogen - hypothetical protein CYA_2076 1 None None None 86607056 Common - carbohydrate uptake ABC transporter-2 (CUT2) family, ATP-binding protein, internal deletion CYA_2434 109 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 86606204 Common - hypothetical protein CYA_1539 7 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606755 Common atpF ATP synthase F0, B subunit CYA_2115 5 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 86605288 Nonpathogen - hypothetical protein CYA_0572 1 None None None 86605748 Nonpathogen - hypothetical protein CYA_1053 5 None None None 86605809 Common recJ-1 single-stranded-DNA-specific exonuclease RecJ CYA_1120 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 86606134 Common - isopropylmalate/isohomocitrate dehydrogenase family protein CYA_1467 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 86605640 Nonpathogen - polysaccharide biosynthesis domain protein CYA_0937 3 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 86606907 Common - hypothetical protein CYA_2271 7 None None None 86605379 Nonpathogen - hypothetical protein CYA_0666 6 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86605626 Common - FG-GAP repeat/ASPIC/UnbV domain protein CYA_0924 19 None None None 86606005 Common - ABC transporter, ATP-binding protein CYA_1328 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 86606632 Common - geranylgeranyl reductase family protein CYA_1990 126 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 86604838 Nonpathogen - hypothetical protein CYA_0108 1 None None None 86607201 Common - MutS2 family protein CYA_2582 201 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 86606765 Common dps DNA starvation/stationary phase protection protein Dps CYA_2125 140 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 86605652 Common - hypothetical protein CYA_0950 64 COG1641 COG1641, Uncharacterized conserved protein Function unknown 86607233 Common btpA photosystem I biogenesis protein BtpA CYA_2619 42 COG0434 SgcQ, Predicted TIM-barrel enzyme General function prediction only 86606952 Common rpiA ribose 5-phosphate isomerase A CYA_2325 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 86607378 Nonpathogen petN cytochrome b6-f complex, subunit VIII CYA_2776 2 None None None 86605741 Nonpathogen - hypothetical protein CYA_1046 1 None None None 86604993 Nonpathogen - hypothetical protein CYA_0272 1 None None None 86604814 Common rpe ribulose-phosphate 3-epimerase CYA_0084 217 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 86606424 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit CYA_1770 194 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 86605916 Common psbO photosystem II manganese-stabilizing protein CYA_1233 10 None None None 86604840 Common ddlB D-alanine--D-alanine ligase B CYA_0110 215 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 86606052 Common - hypothetical protein CYA_1382 21 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 86605127 Common - heme oxygenase CYA_0408 24 COG5398 COG5398, Heme oxygenase Inorganic ion transport and metabolism 86606947 Nonpathogen - hypothetical protein CYA_2319 4 None None None 86607434 Common - polyamine transporter, polyamine-binding protein CYA_2832 132 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 86604916 Nonpathogen - hypothetical protein CYA_0192 1 None None None 86605178 Nonpathogen - hypothetical protein CYA_0460 1 None None None 86607074 Nonpathogen - tetratricopeptide repeat family protein CYA_2453 1 COG4105 ComL, DNA uptake lipoprotein General function prediction only 86604815 Nonpathogen - hypothetical protein CYA_0085 1 None None None 86607123 Common - glycosyl transferase, group 2 CYA_2503 145 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86605137 Common - pentapeptide repeat family protein CYA_0418 96 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86605252 Common - arginase family protein CYA_0535 32 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 86607036 Common potC spermidine/putrescine ABC transporter, permease protein PotC CYA_2412 184 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 86606800 Nonpathogen - CheW domain protein CYA_2160 5 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 86605224 Common - hypothetical protein CYA_0507 6 None None None 86606542 Common - peptidase, M23B family CYA_1895 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 86606866 Nonpathogen - hypothetical protein CYA_2228 8 None None None 86605171 Nonpathogen - hypothetical protein CYA_0453 1 None None None 86606651 Nonpathogen - hypothetical protein CYA_2008 2 None None None 86606673 Common - iron chelate uptake ABC transporter (FeCT) family, permease protein CYA_2033 179 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 86606444 Common - putative hydantoin utilization protein A CYA_1791 116 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 86604950 Common - ISSoc7, transposase CYA_0226 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606967 Nonpathogen - hypothetical protein CYA_2340 5 None None None 86605002 Nonpathogen - hypothetical protein CYA_0281 1 None None None 86604800 Common - hypothetical protein CYA_0069 8 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 86604966 Nonpathogen - hypothetical protein CYA_0242 3 None None None 86606036 Common - oxidoreductase, short chain dehydrogenase/reductase family CYA_1365 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 86607416 Common purH bifunctional purine biosynthesis protein PurH CYA_2813 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 86604995 Nonpathogen - putative lipoprotein CYA_0274 1 COG3889 COG3889, Predicted solute binding protein General function prediction only 86604944 Common cpcA-1 phycocyanin, alpha subunit CYA_0220 10 None None None 86606076 Common groES co-chaperonin GroES CYA_1406 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 86607313 Nonpathogen - hypothetical protein CYA_2705 1 None None None 90296798 Common - ISSoc3, orfA transposase, interruption-C CYA_2640 59 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605143 Common cobD-1 cobalamin biosynthesis protein CobD CYA_0424 148 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 86606937 Common - glucose/sorbosone dehydrogenase family protein CYA_2304 123 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 86605192 Common - OsmC family protein CYA_0474 40 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 86606013 Common apcB-1 allophycocyanin, beta subunit CYA_1337 10 None None None 86606919 Common cysQ 3'(2'),5'-bisphosphate nucleotidase CYA_2283 187 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 86607011 Nonpathogen - hypothetical protein CYA_2384 1 None None None 86606148 Common - hypothetical protein CYA_1481 10 COG3431 COG3431, Predicted membrane protein Function unknown 86605506 Common - K+ transporter, Trk family CYA_0800 89 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 86606048 Nonpathogen - hypothetical protein CYA_1377 1 None None None 86605341 Common - metallo-beta-lactamase family protein CYA_0626 151 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 86605050 Common - FAD-dependent oxidoreductase CYA_0330 161 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 86605216 Common - hypothetical protein CYA_0498 11 None None None 86606083 Common - sulfate transporter, sulfate permease (SulP) family CYA_1414 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 86605140 Common - DNA-binding response regulator CYA_0421 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86604926 Common - pentapeptide repeat family protein CYA_0202 97 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606559 Common - hypothetical protein CYA_1912 14 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86605168 Common - hypothetical protein CYA_0449 4 None None None 86606984 Common psbD-1 photosystem II protein D2 CYA_2358 21 None None None 86606819 Common gap-3 glyceraldehyde-3-phosphate dehydrogenase, type I CYA_2179 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 86605153 Common - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family CYA_0434 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 86605724 Common - hypothetical protein CYA_1028 10 None None None 86606861 Common leuA 2-isopropylmalate synthase CYA_2223 212 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 86605692 Common pilM type 4 fimbrial biogenesis protein PilM CYA_0993 74 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 86606263 Common - hypothetical protein CYA_1601 8 None None None 86605109 Nonpathogen - CAB/ELIP/HLIP family protein CYA_0390 1 None None None 86606015 Common - hypothetical protein CYA_1339 96 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 86607143 Nonpathogen - hypothetical protein CYA_2523 1 None None None 86607444 Nonpathogen - hypothetical protein CYA_2843 5 None None None 86605105 Common ribD riboflavin biosynthesis protein RibD CYA_0386 231 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 86605145 Common - hypothetical protein CYA_0426 10 None None None 90296793 Common - ISSoc8, transposase, interruption-N CYA_0737 10 None None None 86604904 Common pyrC dihydroorotase CYA_0178 211 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 86606917 Common - hypothetical protein CYA_2281 37 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 86606266 Nonpathogen - hypothetical protein CYA_1605 1 None None None 86605087 Common mreB rod shape-determining protein CYA_0368 231 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 86605805 Nonpathogen - hypothetical protein CYA_1117 1 None None None 86606208 Common - transcriptional regulator, MerR family CYA_1544 140 COG0789 SoxR, Predicted transcriptional regulators Transcription 86607042 Common yqeG phosphatase, HAD superfamily, subfamily IIIA CYA_2419 39 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 86606045 Common - ISSoc2, resolvase CYA_1374 25 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605161 Nonpathogen - hypothetical protein CYA_0442 1 None None None 86605911 Common - putative S-layer protein CYA_1228 24 None None None 86605195 Common pflB formate acetyltransferase CYA_0477 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 86606511 Nonpathogen - hypothetical protein CYA_1861 1 None None None 86604960 Common - putative lipoprotein CYA_0236 12 None None None 86605606 Nonpathogen - hypothetical protein CYA_0904 1 None None None 86605838 Common - pentapeptide repeat family protein CYA_1150 101 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606931 Common mraW S-adenosyl-methyltransferase MraW CYA_2297 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 86604802 Common chlP geranylgeranyl reductase CYA_0072 67 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 86605009 Nonpathogen - hypothetical protein CYA_0288 1 None None None 86606653 Common - ISSoc4, transposase orfA CYA_2010 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607430 Common rdgB non-canonical purine NTP pyrophosphatase CYA_2828 234 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 86605348 Common aat leucyl/phenylalanyl-tRNA--protein transferase CYA_0634 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 86605540 Nonpathogen - hypothetical protein CYA_0835 6 None None None 86604929 Common - CAB/ELIP/HLIP family protein CYA_0205 10 None None None 86605130 Common rpoC2 DNA-directed RNA polymerase subunit beta' CYA_0411 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 86606011 Nonpathogen - hypothetical protein CYA_1335 1 None None None 86607316 Common - drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein CYA_2708 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 86606683 Common cpcB-2 phycocyanin, beta subunit CYA_2043 10 None None None 86604988 Common ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CYA_0267 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 86607026 Common - peptidase, S8A (subtilisin) family CYA_2401 140 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 86606161 Common - putative transporter CYA_1495 33 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 86604984 Common - alpha-amylase family protein CYA_0263 102 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 86605782 Common recA recombinase A CYA_1092 220 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 86604974 Common ppa inorganic pyrophosphatase CYA_0251 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 86606061 Common - hypothetical protein CYA_1391 10 None None None 86607345 Common - putative methyl-accepting chemotaxis protein CYA_2741 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 86605228 Common - putative RNA-binding protein CYA_0511 62 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 86606344 Common - hypothetical protein CYA_1688 27 None None None 86606589 Common psbP photosystem II oxygen evolving complex protein PsbP CYA_1943 9 None None None 86607456 Common - penicillin-binding protein, 1A family CYA_2856 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 90296800 Common - ISSoc3, orfA transposase, interruption-C CYA_2724 61 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606648 Common - staphylococcal nuclease domain protein CYA_2005 68 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 86607122 Nonpathogen - hypothetical protein CYA_2502 3 None None None 86605402 Common - ISSoc1, transposase CYA_0690 61 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605952 Common holB DNA polymerase III subunit delta' CYA_1270 210 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 86607225 Common - hypothetical protein CYA_2612 50 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 86606235 Common - oxidoreductase, FAD-binding CYA_1571 14 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 86606863 Common apcC phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core CYA_2225 8 None None None 86606630 Common - hypothetical protein CYA_1987 11 None None None 86604806 Common - hypothetical protein CYA_0076 18 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 86606096 Nonpathogen - putative lipoprotein CYA_1428 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 86606642 Common - hypothetical protein CYA_1999 26 COG4095 COG4095, Uncharacterized conserved protein Function unknown 86606957 Common petJ cytochrome c6 CYA_2330 10 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 86605877 Common - hypothetical protein CYA_1190 9 None None None 86606168 Nonpathogen - hypothetical protein CYA_1501 1 None None None 86605996 Common gspO prepilin peptidase CYA_1318 119 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86607037 Common - hydrolase, alpha/beta fold family CYA_2413 166 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86606942 Nonpathogen - hypothetical protein CYA_2314 1 None None None 86605260 Common hemA glutamyl-tRNA reductase CYA_0543 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 86606529 Common alaS alanyl-tRNA synthetase CYA_1881 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606081 Common - putative S-layer protein CYA_1412 11 None None None 86607440 Common - hypothetical protein CYA_2838 13 None None None 86607249 Common - RNA polymerase sigma factor, group 1 CYA_2635 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 86605255 Nonpathogen - hypothetical protein CYA_0538 1 None None None 86606656 Nonpathogen psaM photosystem I reaction center subunit XII CYA_2014 1 None None None 86607087 Common - GTP-binding protein CYA_2465 13 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 86604914 Common rpsU 30S ribosomal protein S21 CYA_0188 101 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 86605099 Common - hypothetical protein CYA_0380 63 COG2912 COG2912, Uncharacterized conserved protein Function unknown 86605084 Common chlD magnesium chelatase, ATPase subunit D CYA_0365 77 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 86607006 Nonpathogen - hypothetical protein CYA_2380 1 None None None 86606799 Nonpathogen - hypothetical protein CYA_2159 1 None None None 86605283 Common - hypothetical protein CYA_0567 10 None None None 86606820 Common murI glutamate racemase CYA_2180 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 86605175 Common nusA transcription elongation factor NusA CYA_0457 222 COG0195 NusA, Transcription elongation factor Transcription 86604812 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase CYA_0081 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 86606938 Common - glycosyl hydrolase, family 31 CYA_2306 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 86604740 Nonpathogen - hypothetical protein CYA_0007 1 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 86605543 Common - hypothetical protein CYA_0839 10 None None None 86605181 Common cbiE/cbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE/T subunits CYA_0463 114 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 86607047 Common - ISSoc2, transposase CYA_2424 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605206 Common - HNH endonuclease domain protein CYA_0488 102 COG1403 McrA, Restriction endonuclease Defense mechanisms 86605319 Common ureC urease subunit alpha CYA_0603 97 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 86605418 Common - hypothetical protein CYA_0706 32 COG2119 COG2119, Predicted membrane protein Function unknown 86606422 Common rimI ribosomal-protein-alanine acetyltransferase CYA_1768 89 COG0456 RimI, Acetyltransferases General function prediction only 86606376 Common - hypothetical protein CYA_1721 17 None None None 86606222 Nonpathogen - hypothetical protein CYA_1558 3 None None None 86604835 Nonpathogen - hypothetical protein CYA_0105 1 None None None 86607172 Common - sensory box histidine kinase CYA_2553 219 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86605796 Common - putative iron-sulfur cluster-binding protein CYA_1107 20 COG5469 COG5469, Predicted metal-binding protein Function unknown 86604967 Common hemC porphobilinogen deaminase CYA_0243 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 86606928 Common - hypothetical protein CYA_2295 71 COG2928 COG2928, Uncharacterized conserved protein Function unknown 86606719 Common - tetratricopeptide repeat protein CYA_2079 122 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 86607012 Common hemL glutamate-1-semialdehyde aminotransferase CYA_2386 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 86606711 Common glgA glycogen synthase CYA_2071 134 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 86605926 Common gcvT glycine cleavage system T protein CYA_1242 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 86606281 Common macB macrolide ABC transporter, permease protein CYA_1621 201 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 86605066 Common - ISSoc2, resolvase CYA_0346 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605154 Common - efflux transporter, RND family, MFP subunit CYA_0435 108 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 86605933 Common - hypothetical protein CYA_1251 6 None None None 86606029 Common - ISSoc4, transposase orfA CYA_1358 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605336 Common - ISSoc1, transposase CYA_0620 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607207 Common hrcA heat-inducible transcription repressor CYA_2590 148 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 86606579 Nonpathogen psbK photosystem II reaction center protein PsbK precursor CYA_1933 1 None None None 86606558 Common - peptidase, S54 (rhomboid) family CYA_1911 100 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 86604787 Common selD selenide, water dikinase CYA_0055 174 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 86607306 Common - hypothetical protein CYA_2696 33 COG2052 COG2052, Uncharacterized protein conserved in bacteria Function unknown 86606829 Common sufR iron-sulfur cluster biosynthesis transcriptional regulator SufR CYA_2189 55 COG2345 COG2345, Predicted transcriptional regulator Transcription 86606102 Nonpathogen - hypothetical protein CYA_1434 1 None None None 86605691 Common - alcohol dehydrogenase, iron-containing CYA_0992 90 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 86607334 Common - hypothetical protein CYA_2730 7 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 86606904 Common - heptosyltransferase family protein CYA_2267 87 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 86607290 Common galE UDP-glucose 4-epimerase CYA_2679 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 86606171 Common cobM precorrin-4 C11-methyltransferase CYA_1504 203 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 86607138 Common - hypothetical protein CYA_2518 15 None None None 86607168 Nonpathogen - hypothetical protein CYA_2549 1 None None None 86606784 Common infC translation initiation factor IF-3 CYA_2144 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 86606838 Nonpathogen - hypothetical protein CYA_2198 1 None None None 86606988 Common - OppBC ABC transporter family, permease protein CYA_2362 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 86605969 Nonpathogen - hypothetical protein CYA_1287 1 None None None 86607386 Nonpathogen - hypothetical protein CYA_2784 1 None None None 86607181 Common - hypothetical protein CYA_2562 10 COG5512 COG5512, Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives General function prediction only 86605295 Nonpathogen - hypothetical protein CYA_0579 1 None None None 86607078 Common menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase CYA_2456 46 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 86606178 Common ctaE cytochrome c oxidase, subunit III CYA_1512 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 86606261 Common - potassium transporter, voltage-gated ion channel (VIC) family CYA_1599 203 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 86605515 Common mutY A/G-specific adenine glycosylase CYA_0809 228 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 86607404 Nonpathogen - hypothetical protein CYA_2802 1 None None None 86607238 Common recN DNA repair protein RecN CYA_2624 201 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 86604920 Common carA carbamoyl phosphate synthase small subunit CYA_0195 237 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 86606022 Common - sensory box histidine kinase CYA_1349 211 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86607192 Common - ISSoc2, transposase CYA_2573 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606490 Common nifW nitrogenase stabilizing/protective protein nifW CYA_1839 23 None None None 86605533 Common gvpA gas vesicle synthesis protein GvpA CYA_0829 22 None None None 86606855 Common gshB glutathione synthetase CYA_2216 138 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 86606748 Nonpathogen - hypothetical protein CYA_2108 1 None None None 86607145 Nonpathogen - putative lipoprotein CYA_2525 1 None None None 86604794 Common - putative lipoprotein CYA_0062 14 None None None 86606429 Common trmD tRNA (guanine-N(1)-)-methyltransferase CYA_1775 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 86605530 Common gvpN gas vesicle protein GvpN CYA_0826 62 COG0714 COG0714, MoxR-like ATPases General function prediction only 86606833 Common sufC FeS assembly ATPase SufC CYA_2193 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 86607190 Common - quaternary amine ABC transporter (QAT) family, permease protein CYA_2571 158 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 86605827 Common - 3-beta hydroxysteroid dehydrogenase/isomerase family protein CYA_1139 126 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 86607470 Nonpathogen - hypothetical protein CYA_2870 10 None None None 86607324 Nonpathogen - hypothetical protein CYA_2716 1 None None None 86606391 Common - FAD-binding protein CYA_1736 89 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 86606526 Common devC probable glycolipid ABC exporter (DevE) family, permease protein CYA_1878 45 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 86606966 Common proS prolyl-tRNA synthetase CYA_2339 238 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606360 Common - hypothetical protein CYA_1704 10 None None None 86605557 Common - site-specific recombinase, phage integrase family CYA_0853 207 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 86605035 Common - hypothetical protein CYA_0314 10 None None None 86606497 Common modB molybdate ABC transporter, permease protein CYA_1846 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 86606551 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CYA_1904 18 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 86604777 Nonpathogen - hypothetical protein CYA_0045 5 None None None 86606744 Common accD acetyl-CoA carboxylase subunit beta CYA_2104 218 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 86604767 Common psaL-1 photosystem I reaction center protein subunit XI CYA_0035 10 None None None 86605455 Common - NADH dehydrogenase subunit H CYA_0745 187 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 86606519 Common est carboxylesterase CYA_1871 43 COG1647 COG1647, Esterase/lipase General function prediction only 86605980 Common rpsL 30S ribosomal protein S12 CYA_1299 246 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 86604861 Common - DnaJ family protein CYA_0132 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86607497 Common purA adenylosuccinate synthetase CYA_2899 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 86605885 Nonpathogen - hypothetical protein CYA_1199 1 None None None 86605914 Common - nucleotidyl transferase family protein CYA_1231 236 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 86607270 Common bioB biotin synthase CYA_2658 172 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 86607364 Nonpathogen - hypothetical protein CYA_2761 5 None None None 86606312 Common - sensor histidine kinase/response regulator CYA_1656 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86605249 Common grxC glutaredoxin 3 CYA_0532 121 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 86605890 Common cobO-2 hypothetical protein CYA_1205 141 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 86605773 Common htpG heat shock protein 90 CYA_1079 148 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 86606472 Nonpathogen - hypothetical protein CYA_1822 1 None None None 86605648 Common nadA quinolinate synthetase CYA_0946 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 86606117 Common truA tRNA pseudouridine synthase A CYA_1449 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 86605279 Common dnaX DNA polymerase III, subunits gamma and tau CYA_0563 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 86604822 Common - hypothetical protein CYA_0092 109 COG1738 COG1738, Uncharacterized conserved protein Function unknown 86606563 Common ybbB tRNA 2-selenouridine synthase CYA_1917 65 COG2603 COG2603, Predicted ATPase General function prediction only 86606968 Nonpathogen - hypothetical protein CYA_2341 1 None None None 86607150 Common - manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein CYA_2529 148 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 86604784 Nonpathogen - hypothetical protein CYA_0054 1 None None None 86604881 Common - peptide/opine/nickel uptake ABC transporter (PepT) family, ATP-binding protein CYA_0152 248 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 86605736 Common - hypothetical protein CYA_1041 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 86605056 Common aroC chorismate synthase CYA_0336 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 86607284 Common - CAAX amino terminal protease family protein CYA_2672 31 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 86606075 Common - phenazine biosynthesis protein, PhzF family CYA_1405 123 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 86606869 Common - quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein CYA_2231 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 86607321 Common - hypothetical protein CYA_2713 21 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86606870 Common - quaternary amine uptake ABC transporter (QAT) family, permease protein CYA_2232 124 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 86605525 Common - radical SAM domain protein CYA_0820 60 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 86607331 Common - response regulator CYA_2727 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 86605046 Common - 2',5' RNA ligase family protein CYA_0324 16 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 86605947 Common minD septum site-determining protein MinD CYA_1265 127 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 86606808 Common - putative lipoprotein CYA_2168 6 None None None 86606274 Common ccmL carbon dioxide concentrating mechanism protein CcmL CYA_1613 38 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 86607061 Common - ISSoc2, resolvase CYA_2439 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606054 Common - hypothetical protein CYA_1384 10 None None None 86607388 Common upgA glycerol-3-phosphate ABC transporter, permease protein CYA_2786 170 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 86605261 Nonpathogen - hypothetical protein CYA_0544 1 None None None 86606396 Common - ABC1 domain protein CYA_1741 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 86605286 Common - hypothetical protein CYA_0570 9 None None None 86606210 Common - mce related protein CYA_1545 19 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 86607266 Common trpG anthranilate synthase component II CYA_2654 237 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 86605074 Common - glycosyl transferase, group 1 family protein CYA_0354 181 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 86605305 Common - succinyldiaminopimelate transaminase CYA_0589 235 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 86606220 Common - hemolysin A CYA_1556 132 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 86606675 Common mutS DNA mismatch repair protein CYA_2035 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 86604818 Common - putative undecaprenol kinase CYA_0087 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 86607136 Common - hypothetical protein CYA_2516 94 COG0433 COG0433, Predicted ATPase General function prediction only 86605899 Common - coenzyme F420 hydrogenase/dehydrogenase family protein CYA_1215 37 COG1035 FrhB, Coenzyme F420-reducing hydrogenase, beta subunit Energy production and conversion 86605100 Nonpathogen - hypothetical protein CYA_0381 1 None None None 86607480 Common - hypothetical protein CYA_2880 29 COG3225 GldG, ABC-type uncharacterized transport system involved in gliding motility, auxiliary component Cell motility and secretion 86606506 Common - metal chelate ABC transporter, metal chelate-binding protein CYA_1855 130 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 86605443 Common cas5e CRISPR-associated protein Cas5, Ecoli subtype CYA_0731 38 None None None 86607256 Common - response regulator CYA_2644 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86605705 Common - putative purine phosphoribosyltransferase CYA_1006 55 COG2236 COG2236, Predicted phosphoribosyltransferases General function prediction only 86605650 Common gnd 6-phosphogluconate dehydrogenase, decarboxylating CYA_0947 183 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 86604856 Common - putative nuclease SbcCD, D subunit CYA_0126 127 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 86605351 Common - fasciclin domain protein CYA_0636 67 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 86606901 Common ppnK inorganic polyphosphate/ATP-NAD kinase CYA_2264 231 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 86606926 Common - acetyltransferase, GNAT family CYA_2292 49 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 86607261 Common - tetratricopeptide repeat protein CYA_2650 10 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 86605576 Nonpathogen - putative CRISPR-associated protein, APE2256 family CYA_0871 7 COG4006 COG4006, Uncharacterized protein conserved in archaea Function unknown 86607170 Common - hypothetical protein CYA_2551 23 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86607183 Common uvrB excinuclease ABC subunit B CYA_2564 225 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 86606735 Nonpathogen - hypothetical protein CYA_2095 1 None None None 86606997 Common - copper metallochaperone CYA_2371 8 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 86606817 Common proB gamma-glutamyl kinase CYA_2177 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 86607486 Common - sensory box histidine kinase CYA_2886 192 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 86605659 Nonpathogen - hypothetical protein CYA_0957 1 None None None 86605638 Common - oxidoreductase, short chain dehydrogenase/reductase family CYA_0936 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 86606185 Common gmd GDP-mannose 4,6-dehydratase CYA_1520 225 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 86606330 Nonpathogen - hypothetical protein CYA_1674 1 None None None 86605397 Common - cystine ABC transporter, cystine-binding protein CYA_0685 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 86607359 Common - protein kinase CYA_2756 149 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86604735 Common - hypothetical protein CYA_0003 4 None None None 86606430 Nonpathogen - hypothetical protein CYA_1776 1 None None None 86605991 Common tatC Sec-independent protein translocase TatC CYA_1310 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 86605270 Common - membrane protein, OMP85 family CYA_0554 157 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 86606846 Common pyk pyruvate kinase CYA_2206 229 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 86604839 Common ftsZ cell division protein FtsZ CYA_0109 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 86606283 Common dgkA diacylglycerol kinase CYA_1623 61 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 86605408 Nonpathogen - hypothetical protein CYA_0696 2 None None None 86606533 Common - hypothetical protein CYA_1886 4 None None None 86604753 Common folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase CYA_0019 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 86604775 Common - amine oxidase, flavin-containing CYA_0043 62 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 86605110 Common - cysteine desulfurase, SufS family CYA_0391 241 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 86605017 Common gcp O-sialoglycoprotein endopeptidase CYA_0297 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 86605465 Nonpathogen - hypothetical protein CYA_0758 2 COG4325 COG4325, Predicted membrane protein Function unknown 86604874 Common - hydrolase, alpha/beta fold family CYA_0145 125 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86607475 Common rpsF ribosomal protein S6 CYA_2875 47 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 86606433 Common rplK 50S ribosomal protein L11 CYA_1779 248 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 86606101 Nonpathogen - putative lipoprotein CYA_1433 1 COG3889 COG3889, Predicted solute binding protein General function prediction only 86605615 Common - putative membrane-associated zinc metalloprotease CYA_0913 208 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 86606248 Common - ISSoc1, transposase CYA_1585 63 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605430 Common aroQ 3-dehydroquinate dehydratase CYA_0718 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 86605683 Common - transcriptional regulator, LysR family CYA_0984 190 COG0583 LysR, Transcriptional regulator Transcription 86605363 Common - putative pilus biogenesis protein CYA_0649 17 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 86605862 Common rpsS ribosomal protein S19 CYA_1174 242 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 86606724 Nonpathogen - hypothetical protein CYA_2084 1 None None None 86605065 Common - ISSoc2, transposase CYA_0345 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607004 Common obgE GTPase ObgE CYA_2378 249 COG0536 Obg, Predicted GTPase General function prediction only 86604936 Common - protein phosphatase 2C family protein CYA_0212 135 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 86605848 Common secY preprotein translocase subunit SecY CYA_1160 236 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 86607293 Common - hypothetical protein CYA_2682 4 None None None 86606024 Nonpathogen - hypothetical protein CYA_1351 2 None None None 86607116 Nonpathogen - hypothetical protein CYA_2496 5 COG5373 COG5373, Predicted membrane protein Function unknown 86606197 Common - hypothetical protein CYA_1532 33 COG2324 COG2324, Predicted membrane protein Function unknown 86607355 Common - putative alpha-glucan phosphorylase CYA_2752 149 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 86605813 Common - antibiotic biosynthesis monooxygenase domain protein CYA_1124 32 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 86605716 Nonpathogen - hypothetical protein CYA_1020 3 None None None 86605726 Common - R3H domain protein CYA_1030 31 COG3854 SpoIIIAA, ncharacterized protein conserved in bacteria Function unknown 86606255 Nonpathogen - hypothetical protein CYA_1592 5 None None None 86604930 Common nadE NAD+ synthetase CYA_0206 202 COG0171 NadE, NAD synthase Coenzyme metabolism 86606198 Common lspA lipoprotein signal peptidase CYA_1533 181 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 86604758 Common rumA 23S rRNA (uracil-5-)-methyltransferase RumA CYA_0025 200 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 86605700 Common - hypothetical protein CYA_1001 10 None None None 86605504 Common rnhA ribonuclease H CYA_0798 174 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 86604939 Common cpcG1 phycobilisome rod-core linker polypeptide cpcG1 CYA_0215 10 None None None 86606889 Common - peptidase, U62 family CYA_2252 167 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 86606068 Common metG methionyl-tRNA synthetase CYA_1398 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86605585 Nonpathogen - CRISPR-associated RAMP protein CYA_0881 5 COG1337 COG1337, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86605677 Nonpathogen - hypothetical protein CYA_0977 1 None None None 86607114 Common - hypothetical protein CYA_2494 175 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 86605880 Common rbcL ribulose bisophosphate carboxylase CYA_1194 67 COG1850 RbcL, Ribulose 1,5-bisphosphate carboxylase, large subunit Carbohydrate transport and metabolism 86605416 Nonpathogen - hypothetical protein CYA_0705 1 None None None 86605664 Nonpathogen - hypothetical protein CYA_0962 2 None None None 86605024 Common - NHL repeat domain protein CYA_0304 49 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 86607120 Nonpathogen - hypothetical protein CYA_2500 1 None None None 86607140 Common - Ser/Thr protein phosphatase family protein CYA_2520 52 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 86605841 Common - iron-sulfur cluster-binding protein, Rieske family CYA_1153 50 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 86606912 Common sds solanesyl diphosphate synthase CYA_2276 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 86605577 Nonpathogen - hypothetical protein CYA_0873 3 None None None 86606127 Common - hypothetical protein CYA_1459 3 COG0730 COG0730, Predicted permeases General function prediction only 86606457 Common - mannosyl-3-phosphoglycerate phosphatase CYA_1804 22 COG3769 COG3769, Predicted hydrolase (HAD superfamily) General function prediction only 86606320 Common - dihydroorotase CYA_1664 181 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 86607425 Nonpathogen - HNH endonuclease domain protein CYA_2823 2 COG1403 McrA, Restriction endonuclease Defense mechanisms 86606348 Nonpathogen - hypothetical protein CYA_1692 3 None None None 86605807 Nonpathogen - hypothetical protein CYA_1118 1 None None None 86606459 Common - DnaJ domain protein CYA_1806 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86606366 Nonpathogen - hypothetical protein CYA_1711 1 None None None 86606308 Common rpmG 50S ribosomal protein L33 CYA_1652 18 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 86607217 Common - ferredoxin-thioredoxin reductase, catalytic beta subunit CYA_2601 8 COG4802 FtrB, Ferredoxin-thioredoxin reductase, catalytic subunit Energy production and conversion 86606304 Common dnaN DNA polymerase III subunit beta CYA_1647 214 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 86605437 Common tal transaldolase/EF-hand domain-containing protein CYA_0725 180 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 86606971 Nonpathogen - hypothetical protein CYA_2344 1 None None None 86606701 Common - putative peptidase TldD CYA_2061 169 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 86607028 Common - pentapeptide repeat family protein CYA_2403 68 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606751 Common - ferric iron uptake ABC transporter (FeT) family, permease protein CYA_2111 148 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 86605499 Common - pentapeptide repeat family protein CYA_0793 106 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606339 Common - hypothetical protein CYA_1683 29 COG0628 PerM, Predicted permease General function prediction only 86605595 Common ntrB-2 nitrate ABC transporter, permease protein CYA_0893 190 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 86605129 Common rpoC1 DNA-directed RNA polymerase subunit gamma CYA_0410 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 86607210 Common - transporter, drug:H+ antiporter-1 (12 spanner) (DHA1) family CYA_2593 171 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 86605119 Nonpathogen - hypothetical protein CYA_0400 1 None None None 86605902 Common smpB SsrA-binding protein CYA_1218 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 86607279 Common - ankyrin repeat protein CYA_2667 99 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 86606032 Common purL phosphoribosylformylglycinamidine synthase II CYA_1361 235 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 86605432 Common - exonuclease, SbcC family CYA_0721 116 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 86605274 Common - glutaredoxin-like protein CYA_0558 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 86606098 Nonpathogen - hypothetical protein CYA_1429 1 None None None 86605353 Common - NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family CYA_0639 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 86604955 Common - hypothetical protein CYA_0231 10 None None None 86605879 Common clpP ATP-dependent Clp protease, proteolytic subunit ClpP CYA_1193 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86606468 Common - transporter, major facilitator family CYA_1817 111 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 86606940 Nonpathogen - response regulator CYA_2312 8 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86604948 Common - hydrophobic amino acid uptake ABC transporter (HAAT) family, amino acid-binding protein CYA_0224 112 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 86606026 Common serA D-3-phosphoglycerate dehydrogenase CYA_1354 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 86605400 Common sdhA succinate dehydrogenase flavoprotein subunit CYA_0688 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 86604982 Nonpathogen - hypothetical protein CYA_0261 10 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 86607147 Common - leucyl aminopeptidase CYA_2527 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 86606727 Common - hypothetical protein CYA_2087 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 86607373 Common - hypothetical protein CYA_2771 6 None None None 86607442 Common tgt queuine tRNA-ribosyltransferase CYA_2841 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 86606705 Common tatA-2 Sec-independent protein translocase protein TatA CYA_2065 12 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 86606073 Common petC cytochrome b6-f complex, iron-sulfur subunit CYA_1403 94 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 86606229 Common - hypothetical protein CYA_1565 59 COG0762 COG0762, Predicted integral membrane protein Function unknown 86604810 Nonpathogen - hypothetical protein CYA_0080 6 None None None 86606420 Nonpathogen - hypothetical protein CYA_1765 1 None None None 86605655 Common - TPR repeat protein CYA_0953 30 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 86607039 Common - ISSoc3, orfA transposase CYA_2415 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606767 Common glgP alpha-glucan phosphorylase CYA_2127 150 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 86607428 Common recJ-2 single-stranded-DNA-specific exonuclease RecJ CYA_2826 195 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 86605188 Common cysA sulfate transport system ATP-binding protein CYA_0470 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 86605545 Common - sensor histidine kinase CYA_0840 15 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86606814 Common - acetyltransferase, GNAT family CYA_2174 41 COG0456 RimI, Acetyltransferases General function prediction only 86605836 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CYA_1148 183 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 86606418 Common cydA cytochrome d ubiquinol oxidase, subunit I CYA_1764 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 86606133 Common priA primosome assembly protein PriA CYA_1466 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 86605033 Common - hypothetical protein CYA_0312 9 None None None 86606639 Common - NADH dehydrogenase subunit J CYA_1996 178 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 86607410 Common - ATPase, AAA family CYA_2809 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 86607439 Common - hypothetical protein CYA_2837 13 None None None 86605159 Common - hypothetical protein CYA_0440 19 COG4671 COG4671, Predicted glycosyl transferase General function prediction only 86605173 Nonpathogen - hypothetical protein CYA_0455 1 None None None 90296795 Common - putative DNA methyltransferase CYA_1313 11 None None None 86605310 Common - TPR repeat protein CYA_0594 167 COG0457 NrfG, FOG: TPR repeat General function prediction only 86606933 Common - response regulator CYA_2298 199 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86604902 Common - hypothetical protein CYA_0174 13 None None None 86605030 Common pheT phenylalanyl-tRNA synthetase subunit beta CYA_0309 249 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 86605163 Nonpathogen - peptidase, M8 (leishmanolysin) family CYA_0444 5 None None None 86607044 Common pyrH uridylate kinase CYA_2421 240 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 86605308 Nonpathogen - hypothetical protein CYA_0592 4 None None None 86607031 Common ribF riboflavin biosynthesis protein RibF CYA_2407 210 COG0196 RibF, FAD synthase Coenzyme metabolism 86605367 Nonpathogen - hypothetical protein CYA_0653 1 None None None 86605139 Common atpD F0F1 ATP synthase subunit beta CYA_0420 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 86606628 Common - pyridoxamine 5'-phosphate oxidase family protein CYA_1985 7 COG5135 COG5135, Uncharacterized conserved protein Function unknown 86606043 Common - transporter, arsenite-antimonite (ArsAB) efflux family CYA_1372 72 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 86607242 Common - putative ATP-dependent DNA helicase RecQ CYA_2628 229 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 86606369 Nonpathogen - hypothetical protein CYA_1714 1 None None None 86607024 Common - hypothetical protein CYA_2399 10 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 86605211 Nonpathogen - hypothetical protein CYA_0493 1 None None None 86606183 Common - outer membrane efflux family protein CYA_1518 117 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 86604999 Common def-2 peptide deformylase CYA_0278 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 86605147 Common - high-affinity Na+/H+ antiporter CYA_0428 179 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 86604789 Common - glutaredoxin family protein CYA_0056 9 None None None 86606655 Common recG ATP-dependent DNA helicase RecG CYA_2013 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 86607127 Common clpS-2 ATP-dependent Clp protease adaptor protein ClpS CYA_2507 63 COG2127 COG2127, Uncharacterized conserved protein Function unknown 86607421 Nonpathogen - hypothetical protein CYA_2819 1 None None None 86606875 Nonpathogen - hypothetical protein CYA_2237 8 None None None 86606580 Nonpathogen - hypothetical protein CYA_1934 1 None None None 86604962 Common - hypothetical protein CYA_0238 61 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 86605089 Nonpathogen mreD rod shape-determining protein MreD CYA_0370 7 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 86606902 Common - hypothetical protein CYA_2265 50 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 86605900 Common - aspartate aminotransferase CYA_1216 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 86605777 Common - deoxyribodipyrimidine photolyase family protein CYA_1082 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 86607236 Common - hydrophobic amino acid ABC transporter (HAAT) family, ATP-binding protein CYA_2622 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 86606427 Common - ISSoc2, transposase CYA_1773 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607058 Common - carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein CYA_2437 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 86605475 Common sixA phosphohistidine phosphatase SixA CYA_0768 52 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 86604895 Common - cyclopropane-fatty-acyl-phospholipid synthase family protein CYA_0166 171 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86606214 Common dnaB replicative DNA helicase CYA_1550 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 86606760 Common - ATP synthase protein I CYA_2120 10 None None None 86604925 Common - DNA-binding response regulator CYA_0201 209 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86604804 Common secD preprotein translocase subunit SecD CYA_0074 221 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 86605780 Common - conserved hypothetical protein TIGR00150 CYA_1090 198 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 86606041 Common - putative sn-glycerol-3-phosphate ABC transporter, permease protein CYA_1370 152 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 86604986 Nonpathogen - hypothetical protein CYA_0265 2 None None None 86605803 Common rpsN 30S ribosomal protein S14 CYA_1114 211 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 86605770 Common - hypothetical protein CYA_1075 15 COG4454 COG4454, Uncharacterized copper-binding protein Inorganic ion transport and metabolism 86604941 Common cpcE-1 phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit CYA_0217 37 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86605152 Nonpathogen - hypothetical protein CYA_0433 1 None None None 86605554 Common - FHA domain protein CYA_0850 15 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 86606319 Common - phosphoglycerate mutase family protein CYA_1663 193 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 86606741 Nonpathogen - hypothetical protein CYA_2101 5 None None None 86607166 Nonpathogen crm2-2 CRISPR-associated protein, Crm2 family CYA_2547 15 COG1353 COG1353, Predicted hydrolase of the HD superfamily (permuted catalytic motifs) General function prediction only 86607402 Common trx-3 thioredoxin CYA_2801 229 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 86606039 Common recR recombination protein RecR CYA_1368 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 86605322 Common ureG urease accessory protein UreG CYA_0606 148 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 86606915 Common rpsP ribosomal protein S16 CYA_2279 209 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 86605984 Common rpsJ 30S ribosomal protein S10 CYA_1303 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 86606407 Common - hypothetical protein CYA_1752 7 None None None 86606001 Common dapF diaminopimelate epimerase CYA_1324 200 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 86606233 Common thiE thiamine-phosphate pyrophosphorylase CYA_1569 208 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 86607227 Common - hypothetical protein CYA_2613 46 COG0398 COG0398, Uncharacterized conserved protein Function unknown 86605710 Common - methyltransferase, FkbM family CYA_1011 4 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 86606770 Common ilvH acetolactate synthase 3 regulatory subunit CYA_2130 193 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 86606088 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A CYA_1419 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 86606166 Nonpathogen - hypothetical protein CYA_1499 1 None None None 86606310 Common rnz ribonuclease Z CYA_1654 115 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 86604808 Nonpathogen - hypothetical protein CYA_0078 1 None None None 86605811 Common - Ser/Thr protein phosphatase family protein CYA_1122 71 COG1409 Icc, Predicted phosphohydrolases General function prediction only 86607390 Common rpsO ribosomal protein S15 CYA_2788 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 86605909 Nonpathogen - hypothetical protein CYA_1225 1 None None None 86606857 Common pnpA polynucleotide phosphorylase/polyadenylase CYA_2218 233 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 86607460 Nonpathogen - hypothetical protein CYA_2860 1 None None None 86606950 Common cbiQ cobalt ABC transporter, permease protein CbiQ CYA_2322 9 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 86604796 Common - hypothetical protein CYA_0064 30 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 86606644 Common - ISSoc2, transposase CYA_2001 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605764 Common ffh signal recognition particle protein CYA_1069 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 86606489 Common - hypothetical protein CYA_1838 16 COG5420 COG5420, Uncharacterized conserved small protein containing a coiled-coil domain Function unknown 86606524 Common murC UDP-N-acetylmuramate--L-alanine ligase CYA_1876 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 86607368 Nonpathogen psbI photosystem II reaction center I protein PsbI CYA_2765 1 None None None 86606536 Common - hypothetical protein CYA_1889 74 COG1912 COG1912, Uncharacterized conserved protein Function unknown 86607397 Common - chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein CYA_2795 9 None None None 86607311 Common acsF magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase CYA_2703 19 None None None 86606986 Common cobW cobalamin biosynthesis protein CobW CYA_2360 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 86607075 Nonpathogen - hypothetical protein CYA_2452 1 None None None 86606865 Common apcA allophycocyanin, alpha subunit CYA_2227 10 None None None 86605244 Common - putative phycobilisome linker polypeptide CYA_0528 10 None None None 86605535 Nonpathogen - V4R domain protein CYA_0831 6 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 86606362 Common - peptidase, M24B family CYA_1706 221 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 86605693 Common pilN type 4 fimbrial biogenesis protein PilN CYA_0994 10 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 86605281 Common coaE dephospho-CoA kinase CYA_0565 199 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 86606480 Nonpathogen - hypothetical protein CYA_1829 1 None None None 86605829 Nonpathogen - hypothetical protein CYA_1141 1 None None None 86606495 Common - molybdenum-pterin binding domain protein CYA_1844 59 COG3585 MopI, Molybdopterin-binding protein Coenzyme metabolism 86606545 Nonpathogen - hypothetical protein CYA_1898 7 None None None 86606680 Common cpcE-2 phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit CYA_2040 9 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86607014 Common - hypothetical protein CYA_2388 78 COG1259 COG1259, Uncharacterized conserved protein Function unknown 86605208 Common ruvA Holliday junction DNA helicase motor protein CYA_0490 207 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 86605954 Common efp elongation factor P CYA_1272 217 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 86605221 Common hisIE histidine biosynthesis bifunctional protein HisIE CYA_0504 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 86606623 Common - hypothetical protein CYA_1979 10 None None None 86606570 Common - urea ABC transporter, urea-binding protein CYA_1924 129 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 86605513 Common - ISSoc2, transposase CYA_0807 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606961 Common - protein kinase domain/TPR repeat protein CYA_2333 207 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86605968 Common - hypothetical protein CYA_1286 9 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 86605425 Common lipA-2 lipoyl synthase CYA_0714 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 86607085 Nonpathogen - hypothetical protein CYA_2463 6 None None None 86604877 Common metE-1 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase CYA_0148 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 86607384 Common - brachyspira iron ABC transporter (BIT) family, iron-binding protein CYA_2782 116 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 86605457 Common - NAD(P)H-quinone oxidoreductase subunit H CYA_0747 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 86607304 Common - ISSoc2, resolvase CYA_2694 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606920 Common - pentapeptide repeat family protein CYA_2284 93 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86605301 Common - peptidase, T1( proteasome) family CYA_0585 54 COG3484 COG3484, Predicted proteasome-type protease Posttranslational modification, protein turnover, chaperones 86605487 Common phrB-2 deoxyribodipyrimidine photolyase CYA_0780 131 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 86606400 Common - light-independent protochlorophyllide reductase, B subunit, truncation CYA_1745 24 None None None 86607142 Common psaB photosystem I P700 chlorophyll a apoprotein A2 CYA_2522 14 None None None 86606841 Common leuD isopropylmalate isomerase small subunit CYA_2201 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 86606206 Common - transcriptional regulator, Crp/Fnr family CYA_1541 90 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 86605391 Nonpathogen - hypothetical protein CYA_0679 2 None None None 86605883 Common - hypothetical protein CYA_1197 32 COG1836 COG1836, Predicted membrane protein Function unknown 86605747 Nonpathogen - hypothetical protein CYA_1052 1 None None None 86605441 Common cas1-1 CRISPR-associated protein Cas1 CYA_0729 56 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 86605871 Common - hypothetical protein CYA_1184 9 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 86606827 Common - efflux transporter, RND family, MFP subunit CYA_2187 123 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 86605097 Common - hypothetical protein CYA_0378 26 COG1963 COG1963, Uncharacterized protein conserved in bacteria Function unknown 86606353 Common ilvD dihydroxy-acid dehydratase CYA_1697 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 86605931 Common menC O-succinylbenzoate synthase CYA_1249 66 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 86605629 Common - DNA-binding response regulator, LuxR family CYA_0927 225 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86607488 Common - sugar ABC transporter, ATP-binding protein CYA_2888 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 86605612 Common - hypothetical protein CYA_0910 95 COG0391 COG0391, Uncharacterized conserved protein Function unknown 86605052 Common groEL chaperonin GroEL CYA_0332 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 86605094 Common - glycosyl transferase, group 2 family protein CYA_0374 28 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 86604765 Common - putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase CYA_0032 62 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 86606826 Common - phospho-2-dehydro-3-heoxyheptonate aldolase CYA_2186 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 86606713 Common ilvB acetolactate synthase 3 catalytic subunit CYA_2073 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 86606332 Nonpathogen - hypothetical protein CYA_1676 1 None None None 86606448 Common prc-1 C-terminal processing peptidase CYA_1795 184 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 86605014 Common psaL-2 photosystem I reaction center protein subunit XI CYA_0293 10 None None None 86605132 Common - putative transcriptional activator TenA CYA_0413 77 COG0819 TenA, Putative transcription activator Transcription 86606782 Common aspA aspartate ammonia-lyase CYA_2142 206 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 86606177 Common holA DNA polymerase III subunit delta CYA_1511 43 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 86607467 Common - roadblock/LC7 domain family CYA_2867 19 COG2018 COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid General function prediction only 86605820 Common - glyoxalase II family protein CYA_1132 191 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 86606781 Common - sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family CYA_2141 80 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 86605072 Nonpathogen - putative lipoprotein CYA_0353 1 None None None 86607349 Common cbiT precorrin-6B methylase CYA_2746 87 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 86605998 Common pcrA ATP-dependent DNA helicase PcrA CYA_1321 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 86605334 Common narB nitrate reductase CYA_0619 194 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 86606346 Common radC DNA repair protein RadC CYA_1690 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 86605090 Common - iron-sulfur cluster-binding protein CYA_0371 89 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 86605623 Nonpathogen - hypothetical protein CYA_0921 1 None None None 86606601 Common - ISSoc5, transposase CYA_1956 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605542 Common ppc phosphoenolpyruvate carboxylase CYA_0838 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 86605343 Common - nitroreductase family protein CYA_0628 92 COG0778 NfnB, Nitroreductase Energy production and conversion 86606696 Nonpathogen - hypothetical protein CYA_2056 4 COG4572 ChaB, Putative cation transport regulator General function prediction only 86606992 Common fabH 3-oxoacyl-(acyl-carrier-protein) synthase III CYA_2366 203 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 86605938 Common - hypothetical protein CYA_1255 24 None None None 86606461 Common - hypothetical protein CYA_1808 11 COG4031 COG4031, Predicted metal-binding protein General function prediction only 86607209 Common - SpoIID/LytB domain protein CYA_2592 41 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 86605375 Common - malate dehydrogenase (oxaloacetate-decarboxylating) CYA_0662 202 COG0281 SfcA, Malic enzyme Energy production and conversion 86605293 Common - histone deacetylase family protein CYA_0576 161 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 86605149 Common - hypothetical protein CYA_0430 10 None None None 86607199 Common - ISSoc3, orfA transposase CYA_2580 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607361 Common - oxidoreductase, FAD-dependent CYA_2758 102 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 86605142 Common - putative transcriptional regulator CYA_0423 168 COG1959 COG1959, Predicted transcriptional regulator Transcription 86606227 Common - ABC1 domain protein CYA_1563 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 86605303 Common - hypothetical protein CYA_0587 52 COG2343 COG2343, Uncharacterized protein conserved in bacteria Function unknown 86604898 Common - putative molybdopterin converting factor, subunit 1 CYA_0170 9 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 86606758 Nonpathogen - hypothetical protein CYA_2118 1 None None None 86606398 Nonpathogen - hypothetical protein CYA_1743 18 None None None 86606606 Common lpxB lipid-A-disaccharide synthase CYA_1961 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 86607080 Common - putative membrane protein, YjgP/YjgQ family CYA_2458 89 COG0795 COG0795, Predicted permeases General function prediction only 86606963 Common - response regulator CYA_2336 224 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 86605731 Nonpathogen - hypothetical protein CYA_1035 1 None None None 86607094 Common ribAB riboflavin biosynthesis protein RibA CYA_2473 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 86606892 Nonpathogen - hypothetical protein CYA_2255 1 None None None 86606569 Common - urea ABC transporter, permease protein CYA_1923 93 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 86605365 Nonpathogen - hypothetical protein CYA_0650 1 None None None 86605332 Nonpathogen - hypothetical protein CYA_0618 1 None None None 86606779 Nonpathogen - hypothetical protein CYA_2139 1 None None None 86605263 Common - hypothetical protein CYA_0546 80 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 86606796 Common - putative methyl-accepting chemotaxis protein, truncation CYA_2156 142 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 86606899 Nonpathogen - hypothetical protein CYA_2263 1 None None None 86607302 Nonpathogen - FHA domain protein CYA_2692 7 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 86606487 Common nifX nitrogenase cofactor biosynthesis protein NifX CYA_1836 32 None None None 86607258 Common aroK shikimate kinase CYA_2646 201 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 86605986 Common - methylenetetrahydrofolate reductase family protein CYA_1304 56 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 86605258 Nonpathogen - hypothetical protein CYA_0541 1 None None None 86606242 Nonpathogen - hypothetical protein CYA_1578 1 None None None 86605897 Common - exoribonuclease, VacB/RNB family CYA_1213 192 COG0557 VacB, Exoribonuclease R Transcription 86607338 Common - electron transfer flavoprotein, beta subunit/FixA family protein CYA_2734 151 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 86607451 Common - transporter, small conductance mechanosensitive ion channel (MscS) family CYA_2851 131 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 86605123 Common - hypothetical protein CYA_0404 19 COG2389 COG2389, Uncharacterized metal-binding protein General function prediction only 86606402 Common - aspartate kinase CYA_1747 233 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 86607318 Common - ISSoc4, transposase orfB CYA_2710 52 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606504 Common - TPR repeat protein CYA_1854 76 COG3914 Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family Posttranslational modification, protein turnover, chaperones 86605707 Nonpathogen - hypothetical protein CYA_1008 3 None None None 86605120 Common - peptidase, M48A family CYA_0401 76 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 86605479 Common - hypothetical protein CYA_0772 93 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 86606668 Nonpathogen - hypothetical protein CYA_2028 3 None None None 86607063 Common - transcriptional regulator, MarR family CYA_2441 131 COG1846 MarR, Transcriptional regulators Transcription 86606753 Common atpA F0F1 ATP synthase subunit alpha CYA_2113 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 86607482 Common - ABC transporter, ATP-binding protein CYA_2882 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 86605657 Common - glycosyl transferase, group 2 CYA_0955 66 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86605775 Common - transcriptional regulator, LysR family CYA_1081 191 COG0583 LysR, Transcriptional regulator Transcription 86605788 Common - putative 6-pyruvoyl tetrahydropterin synthase CYA_1099 99 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 86607188 Common - radical SAM enzyme, Cfr family CYA_2570 195 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 86606409 Common - hypothetical protein CYA_1754 8 None None None 86605157 Nonpathogen - hypothetical protein CYA_0438 1 None None None 86605720 Common - ABC transporter, ATP-binding protein CYA_1024 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 86606470 Common nifZ NifZ protein CYA_1819 26 None None None 86605048 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase CYA_0326 151 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 86605423 Nonpathogen - hypothetical protein CYA_0711 1 None None None 86605484 Common - ISSoc5, transposase CYA_0777 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607309 Common lgt-2 prolipoprotein diacylglyceryl transferase CYA_2700 98 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 86605940 Common petH ferredoxin--NADP reductase CYA_1257 139 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 86606479 Common nifB nitrogenase cofactor biosynthesis protein NifB CYA_1828 68 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 86606144 Common - oxidoreductase, aldo/keto reductase family CYA_1477 204 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 86605976 Nonpathogen - hypothetical protein CYA_1295 1 None None None 86606742 Nonpathogen - hypothetical protein CYA_2102 1 None None None 86605299 Common - hypothetical protein CYA_0583 61 COG1432 COG1432, Uncharacterized conserved protein Function unknown 86607495 Common lysA diaminopimelate decarboxylase CYA_2895 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 86606611 Common pilT-1 twitching motility protein CYA_1966 207 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 86605106 Common pgi glucose-6-phosphate isomerase CYA_0387 210 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 86607282 Common - L-lactate dehydrogenase CYA_2670 170 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 86605646 Common - putative secreted protein CYA_0944 80 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 86607213 Nonpathogen - hypothetical protein CYA_2596 1 None None None 86606561 Common - NAD(P)H-quinone oxidoreductase subunit D CYA_1915 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 86606375 Common - metallo-beta-lactamase family protein CYA_1720 196 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 86604922 Nonpathogen - pddD domain protein CYA_0198 5 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 86605561 Nonpathogen - hypothetical protein CYA_0857 1 None None None 86606180 Common ctaC cytochrome c oxidase, subunit II CYA_1514 154 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 86606201 Common argD acetylornithine aminotransferase CYA_1537 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 86604863 Nonpathogen - hypothetical protein CYA_0134 2 None None None 86606118 Common rplQ 50S ribosomal protein L17 CYA_1450 214 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 86605662 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase CYA_0960 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 86605523 Common cefD isopenicillin N-epimerase CYA_0818 206 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 86605763 Common - putative lignostilbene-alpha,beta-dioxygenase CYA_1068 36 COG3670 COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 86607498 Nonpathogen - peptidase family S41, nonpeptidase-like protein CYA_2900 11 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 86605058 Common - hypothetical protein CYA_0338 55 COG2078 AMMECR1, Uncharacterized conserved protein Function unknown 86607379 Nonpathogen - hypothetical protein CYA_2777 1 None None None 86605738 Common - hypothetical protein CYA_1043 8 None None None 86607091 Common - Mov34/MPN/PAD-1 family protein CYA_2469 29 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 86606358 Common cysK cysteine synthase A CYA_1702 222 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 86605320 Common ureE urease accessory protein UreE CYA_0604 38 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 86606815 Nonpathogen - hypothetical protein CYA_2175 13 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 86606129 Nonpathogen - competence protein CYA_1461 1 None None None 86606515 Common aroB 3-dehydroquinate synthase CYA_1866 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 86605822 Common - DnaJ domain protein CYA_1134 230 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86606306 Common - dihydrouridine synthase family protein CYA_1650 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 86605197 Common - response regulator CYA_0479 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86605842 Common - glycosyl transferase, group 1 family protein CYA_1154 183 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 86606411 Common - putative monovalent cation/H+ antiporter subunit C CYA_1756 37 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 86605855 Common rplX ribosomal protein L24 CYA_1167 212 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 86607103 Common - hypothetical protein CYA_2482 10 None None None 86605579 Nonpathogen - hypothetical protein CYA_0875 2 None None None 86606165 Nonpathogen - hypothetical protein CYA_1498 3 None None None 86606910 Nonpathogen - hypothetical protein CYA_2274 1 None None None 86606295 Common mtnN MTA/SAH nucleosidase CYA_1636 87 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 86604972 Common - transcriptional regulator, BlaI/MecI/CopY family CYA_0248 22 COG3682 COG3682, Predicted transcriptional regulator Transcription 86607427 Nonpathogen - hypothetical protein CYA_2825 1 None None None 86605570 Nonpathogen - hypothetical protein CYA_0866 1 None None None 86605007 Common leuC isopropylmalate isomerase large subunit CYA_0286 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 86605201 Common - GGDEF/FHA domain protein CYA_0483 185 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 86606535 Common - small heat shock protein (HSP20) family protein CYA_1888 69 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 86607051 Common psbF cytochrome b559 subunit beta CYA_2429 10 None None None 86605729 Common - polyA polymerase family protein CYA_1032 150 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 86606381 Common lipB lipoyltransferase CYA_1727 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 86605669 Common - hypothetical protein CYA_0968 94 COG2947 COG2947, Uncharacterized conserved protein Function unknown 86606285 Common eda 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase CYA_1625 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 86605670 Common hisH imidazole glycerol phosphate synthase subunit HisH CYA_0969 216 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 86605556 Common accC acetyl-CoA carboxylase biotin carboxylase subunit CYA_0852 229 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 86607219 Common - photosystem II protein, PsbB/PsbC family CYA_2604 10 None None None 86606455 Nonpathogen - hypothetical protein CYA_1802 2 None None None 86606591 Common rbgA ribosomal biogenesis GTPase CYA_1945 149 COG1161 COG1161, Predicted GTPases General function prediction only 86607472 Nonpathogen - hypothetical protein CYA_2872 3 None None None 86605245 Common - taurine uptake ABC transporter (TauT) family, substrate-binding protein CYA_0527 81 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 86607449 Common - antioxidant, AhpC/Tsa family CYA_2849 223 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86605503 Common - hypothetical protein CYA_0797 8 None None None 86605439 Common - ISSoc2, resolvase CYA_0727 24 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605357 Common - iron-sulfur cluster-binding protein CYA_0643 28 COG0633 Fdx, Ferredoxin Energy production and conversion 86606108 Nonpathogen - ISSoc14, transposase, truncation CYA_1440 4 COG1554 ATH1, Trehalose and maltose hydrolases (possible phosphorylases) Carbohydrate transport and metabolism 86604957 Common - peptidase inhibitor, I4 family CYA_0232 31 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 86605869 Common - hypothetical protein CYA_1182 24 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 86605583 Nonpathogen - hypothetical protein CYA_0879 3 None None None 86605112 Nonpathogen - hypothetical protein CYA_0393 2 None None None 86606066 Common - hypothetical protein CYA_1396 8 COG4980 GvpP, Gas vesicle protein General function prediction only 86607395 Common - short chain dehydrogenase CYA_2793 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 86606658 Common - glycosyl transferase, group 4 family protein CYA_2016 143 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 86605613 Common - hypothetical protein CYA_0911 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 86606322 Common - Sua5/YciO/YrdC/YwlC family protein CYA_1666 234 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 86606191 Common - HflC/HflK family protein CYA_1526 215 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 86607371 Common - BioY family protein CYA_2767 37 COG1268 BioY, Uncharacterized conserved protein General function prediction only 86604773 Common - hypothetical protein CYA_0040 8 None None None 86604824 Common - methyltransferase, UbiE/COQ5 family CYA_0094 52 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86606156 Nonpathogen - hypothetical protein CYA_1489 2 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 86607400 Common - putative photosystem II protein CYA_2798 9 None None None 86604755 Common folP dihydropteroate synthase CYA_0022 217 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 86606662 Common - peptidase M3B family, nonpeptidase-like protein CYA_2020 43 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 86605276 Common - hypothetical protein CYA_0560 6 COG1950 COG1950, Predicted membrane protein Function unknown 86606995 Common trpC indole-3-glycerol phosphate synthase CYA_2369 217 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 86605895 Common - putative permease, YjgP/YjgQ family CYA_1211 73 COG0795 COG0795, Predicted permeases General function prediction only 86606978 Common - transcriptional regulator, LuxR family CYA_2351 138 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 86605993 Common - nucleotidyltransferase domain protein CYA_1312 16 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 86607357 Common - cytidine/deoxycytidylate deaminase zinc-binding domain protein CYA_2754 210 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 86607477 Common - zinc carboxypeptidase CYA_2877 34 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 86605685 Common - Rho termination factor, N-terminal domain CYA_0986 20 COG3330 COG3330, Uncharacterized protein conserved in bacteria Function unknown 86605063 Common - DnaK family protein CYA_0343 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 86605277 Common topA DNA topoisomerase I CYA_0561 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 86606887 Common - ISSoc2, resolvase CYA_2250 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86606431 Common secE preprotein translocase subunit SecE CYA_1777 25 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 86604843 Common - PBS lyase HEAT-like repeat protein CYA_0113 26 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86605022 Common - DNA-3-methyladenine glycosylase CYA_0301 83 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 86604969 Common - glycosyl transferase, group 2 family protein CYA_0245 155 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86607178 Common - glycosyl transferase, group 2 family protein CYA_2559 158 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86606277 Common - bacterial microcompartments family protein CYA_1616 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 86605463 Common - dolichyl-phosphate-mannose-protein mannosyltransferase CYA_0756 73 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 86605679 Common - BolA/YrbA family protein CYA_0979 119 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 86605312 Common - ISSoc2, transposase CYA_0596 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607353 Nonpathogen - hypothetical protein CYA_2749 4 None None None 86605860 Common rpsC 30S ribosomal protein S3 CYA_1172 216 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 86606034 Common glnA glutamine synthetase, type I CYA_1363 228 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 86604932 Common - penicillin-binding protein, 1A family CYA_0208 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 86606517 Nonpathogen - hypothetical protein CYA_1868 1 None None None 86607264 Nonpathogen - PBS lyase HEAT-like repeat protein CYA_2652 8 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86606296 Common rpsB ribosomal protein S2 CYA_1638 224 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 86605381 Common zds carotene 7,8-desaturase CYA_0668 64 COG3349 COG3349, Uncharacterized conserved protein Function unknown 86606154 Common - hypothetical protein CYA_1487 9 None None None 86605062 Common - hypothetical protein CYA_0342 9 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 86606715 Nonpathogen - hypothetical protein CYA_2075 1 None None None 86606686 Common - hypothetical protein CYA_2046 10 None None None 86606637 Common - NADH dehydrogenase subunit A CYA_1994 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 86605566 Common proC pyrroline-5-carboxylate reductase CYA_0863 214 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 86604885 Common - ISSoc3, orfA transposase CYA_0156 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606063 Common - DNA-binding response regulator CYA_1392 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86606138 Common - ISSoc2, transposase CYA_1471 10 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605858 Common rpmC 50S ribosomal protein L29 CYA_1170 30 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 86606924 Common - transcriptional regulator, Fur family CYA_2290 117 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 86607144 Nonpathogen - putative lipoprotein CYA_2524 3 None None None 86604783 Common - oligopeptide ABC transporter, permease protein CYA_0051 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 86606575 Common - peptidase S49 (protease IV) family, nonpeptidase-like protein CYA_1928 39 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86605745 Common - ABC transporter, ATP-binding protein CYA_1050 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 86605873 Common metK S-adenosylmethionine synthetase CYA_1186 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 86607348 Common lnt apolipoprotein N-acyltransferase CYA_2744 127 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 86606364 Common - aminotransferase, classes I and II CYA_1709 217 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 86606621 Common - ISSoc7, transposase CYA_1977 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606985 Common psbC photosystem II 44 kDa subunit reaction center protein CYA_2359 10 None None None 86607445 Nonpathogen - hypothetical protein CYA_2844 2 None None None 86605923 Common - cytochrome c assembly protein CYA_1240 128 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 86605942 Common pgl 6-phosphogluconolactonase CYA_1259 130 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 86606843 Common - hypothetical protein CYA_2202 16 COG3937 COG3937, Uncharacterized conserved protein Function unknown 86606824 Common - sensor histidine kinase CYA_2184 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86607382 Common - hydrolase, TatD family CYA_2780 236 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 86604927 Common mutM formamidopyrimidine-DNA glycosylase CYA_0203 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 86606879 Common - hypothetical protein CYA_2241 9 COG5474 COG5474, Uncharacterized conserved protein Function unknown 86605291 Common speE spermidine synthase CYA_0575 116 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 86606599 Nonpathogen - putative lipoprotein CYA_1954 2 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 86605955 Common - glycoprotease family protein CYA_1273 132 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 86605603 Common - hypothetical protein CYA_0901 19 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 86607068 Common - aluminium resistance protein CYA_2446 48 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 86607202 Nonpathogen - hypothetical protein CYA_2583 1 None None None 86605345 Nonpathogen - hypothetical protein CYA_0631 1 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 86606056 Common clpS ATP-dependent Clp protease adaptor CYA_1385 11 COG2127 COG2127, Uncharacterized conserved protein Function unknown 86604745 Nonpathogen - hypothetical protein CYA_0012 1 None None None 86606788 Nonpathogen - hypothetical protein CYA_2148 1 None None None 86607370 Nonpathogen - hypothetical protein CYA_2768 1 None None None 86607301 Nonpathogen - hypothetical protein CYA_2691 1 None None None 86604793 Common - RNA polymerase sigma factor CYA_0061 130 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 86607196 Nonpathogen - hypothetical protein CYA_2577 1 None None None 86605730 Common hemH ferrochelatase CYA_1034 175 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 86606030 Common - ISSoc4, transposase orfB CYA_1360 53 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605160 Common - hypothetical protein CYA_0441 14 COG2510 COG2510, Predicted membrane protein Function unknown 86605808 Nonpathogen - hypothetical protein CYA_1119 1 None None None 86606110 Common - small heat shock protein (HSP20) family protein CYA_1442 157 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 86606522 Nonpathogen - hypothetical protein CYA_1873 1 None None None 86607341 Common - response regulator CYA_2737 219 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 86607055 Common thrS threonyl-tRNA synthetase CYA_2433 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606493 Nonpathogen - hypothetical protein CYA_1842 1 None None None 86606694 Nonpathogen - hypothetical protein CYA_2054 3 None None None 86607101 Common - putative lipoprotein CYA_2480 10 None None None 86607389 Common - hypothetical protein CYA_2787 10 None None None 86607462 Common glyS glycyl-tRNA synthetase subunit beta CYA_2862 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 86605567 Common - pyridine nucleotide-disulfide oxidoreductase CYA_0862 194 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 86604947 Common trpA-1 tryptophan synthase, alpha subunit CYA_0223 219 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 86605246 Common cobA/hemD uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase CYA_0529 201 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 86604872 Common ilvA threonine dehydratase CYA_0143 228 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 86605473 Nonpathogen - hypothetical protein CYA_0766 1 None None None 86605458 Common - hypothetical protein CYA_0748 10 None None None 86607002 Common - Sua5/YciO/YrdC/YwlC family protein CYA_2376 237 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 86606359 Common ileS isoleucyl-tRNA synthetase CYA_1703 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606754 Common atpH F0F1 ATP synthase subunit delta CYA_2114 160 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 86606548 Common kaiB circadian clock protein KaiB CYA_1901 25 None None None 86606962 Common - hypothetical protein CYA_2335 16 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 86604909 Common - hypothetical protein CYA_0183 26 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 86605786 Common - trehalose synthase/putative maltokinase CYA_1097 166 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 86606086 Common - glycerate kinase CYA_1417 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 86606669 Common - iron chelate ABC transporter (FeCT) family, substrate-binding protein CYA_2029 36 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 86605753 Common thiO glycine oxidase ThiO CYA_1058 64 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 86606018 Common ycf3 photosystem I assembly protein Ycf3 CYA_1342 49 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 86605550 Common - base excision DNA repair protein, HhH-GPD family CYA_0846 232 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 86605510 Common rnc ribonuclease III CYA_0804 215 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 86607134 Common - peptidase, M20D family CYA_2514 171 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 86605370 Common - ATP-dependent Clp protease-like protein CYA_0657 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86607158 Nonpathogen - oxidoreductase, 2OG-Fe(II) oxygenase family CYA_2538 9 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 86606834 Common sufD FeS assembly protein SufD CYA_2194 169 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 86606131 Common sppA-2 signal peptide peptidase SppA, 36K type CYA_1463 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86606990 Common - hypothetical protein CYA_2364 2 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 86606419 Common cydB cytochrome d ubiquinol oxidase, subunit II CYA_1766 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 86607163 Nonpathogen - hypothetical protein CYA_2544 2 None None None 86606412 Common - transcriptional regulator, MarR family CYA_1758 153 COG1846 MarR, Transcriptional regulators Transcription 86605039 Common - ABC-2 transporter, permease protein CYA_0319 127 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 86606341 Nonpathogen - hypothetical protein CYA_1685 1 None None None 86604780 Nonpathogen - hypothetical protein CYA_0048 1 None None None 86605158 Common - hypothetical protein CYA_0439 58 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86605620 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase CYA_0918 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 86605427 Nonpathogen - hypothetical protein CYA_0715 1 None None None 86605752 Common thiS thiamine biosynthesis protein ThiS CYA_1057 32 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 86606762 Common - hypothetical protein CYA_2122 8 None None None 86605742 Common - acetyltransferase, GNAT family CYA_1047 20 COG0456 RimI, Acetyltransferases General function prediction only 86606350 Common - iron-sulfur cluster-binding protein CYA_1694 105 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 86607149 Common - hypothetical protein CYA_2530 11 COG5549 COG5549, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 86607139 Common - RecF/RecN/SMC N terminal domain protein CYA_2519 80 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 86605795 Common - putative iron-sulfur cluster-binding protein CYA_1106 29 COG3411 COG3411, Ferredoxin Energy production and conversion 86605251 Common - methyltransferase, UbiE/COQ5 family CYA_0534 96 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86606300 Common - putative transposase, truncation CYA_1642 13 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86604747 Common - GUN4-like family protein CYA_0014 10 None None None 86605191 Common adhE aldehyde-alcohol dehydrogenase CYA_0473 206 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 86607308 Common - DNA-binding response regulator CYA_2699 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86605125 Common pyrR pyrR bifunctional protein CYA_0406 112 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 86606230 Common - cytosine deaminase CYA_1567 67 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 86605361 Common purQ phosphoribosylformylglycinamidine synthase I CYA_0646 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 86604994 Common - hypothetical protein CYA_0273 11 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 86605165 Nonpathogen - hypothetical protein CYA_0446 1 None None None 86604894 Common ubiH 2-octaprenyl-6-methoxyphenyl hydroxylase CYA_0164 133 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 86605134 Common - hypothetical protein CYA_0415 10 None None None 86605213 Common - hypothetical protein CYA_0495 18 None None None 86606443 Common - S4 domain protein CYA_1789 33 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 86604848 Common cbiD cobalt-precorrin-6A synthase CYA_0118 77 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 86607043 Common - conserved hypothetical protein TIGR00247 CYA_2420 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 86605733 Common - hypothetical protein CYA_1038 5 COG5617 COG5617, Predicted integral membrane protein Function unknown 86606801 Common - response regulator CYA_2161 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86605005 Nonpathogen - hypothetical protein CYA_0284 1 None None None 86604980 Nonpathogen psbY photosystem II protein PsbY CYA_0259 1 None None None 86605108 Common - CAB/ELIP/HLIP family protein CYA_0389 8 None None None 86607294 Common - ATPase, arsenite-antimonite (ArsAB) efflux family CYA_2683 96 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 86606317 Common - ISSoc4, transposase orfA CYA_1661 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605172 Common - conserved hypothetical protein TIGR02652 CYA_0454 9 None None None 86606607 Common - hypothetical protein CYA_1962 35 COG3367 COG3367, Uncharacterized conserved protein Function unknown 86605389 Common - mgtC family protein CYA_0677 121 COG1285 SapB, Uncharacterized membrane protein Function unknown 86606143 Common - hydrolase, haloacid dehalogenase family protein CYA_1475 30 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 86605340 Nonpathogen - GDSL-like lipase/acylhydrolase domain protein CYA_0625 3 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 86605580 Nonpathogen - CRISPR-associated RAMP protein CYA_0876 6 COG1337 COG1337, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86606733 Nonpathogen - hypothetical protein CYA_2093 6 None None None 90296797 Nonpathogen - ISSoc3, orfA transposase, interruption-N CYA_2638 1 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86604858 Common speA arginine decarboxylase CYA_0128 69 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 86606850 Nonpathogen - hypothetical protein CYA_2211 4 None None None 86605823 Nonpathogen rpmF 50S ribosomal protein L32 CYA_1135 3 None None None 86607344 Common cheW chemotaxis protein cheW CYA_2740 31 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 86607413 Common rpmI 50S ribosomal protein L35 CYA_2811 157 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 86606070 Nonpathogen - hypothetical protein CYA_1400 1 None None None 86605987 Nonpathogen - hypothetical protein CYA_1306 3 None None None 86605287 Nonpathogen - putative lipoprotein CYA_0571 1 None None None 86605280 Nonpathogen - hypothetical protein CYA_0564 7 COG2433 COG2433, Uncharacterized conserved protein Function unknown 86605377 Common - ICE-like protease (caspase) p20 domain protein CYA_0663 9 None None None 86605645 Nonpathogen - hypothetical protein CYA_0943 2 None None None 86607095 Nonpathogen - hypothetical protein CYA_2472 1 None None None 86605378 Common - CAAX amino terminal protease family protein CYA_0665 8 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 86605328 Common nrtA nitrate ABC transporter, nitrate-binding protein NrtA CYA_0613 85 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 86606037 Common napA transporter, monovalent cation:proton antiporter-2 (CPA2) family CYA_1366 118 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 86606049 Nonpathogen - hypothetical protein CYA_1378 2 None None None 86606217 Common pstC-1 phosphate ABC transporter, permease protein PstC CYA_1553 222 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 86605020 Common - fasciclin domain protein CYA_0299 69 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 86604798 Common - FHA domain protein CYA_0066 9 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 86606226 Common glgC glucose-1-phosphate adenylyltransferase CYA_1562 182 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 86605083 Common - aldehyde dehydrogenase family protein CYA_0364 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 86606908 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ CYA_2272 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 86605202 Common - NAD-dependent epimerase/dehydratase family protein CYA_0484 234 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 86606738 Common gcvP glycine dehydrogenase CYA_2098 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 86605547 Common - hypothetical protein CYA_0843 56 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 86606665 Nonpathogen - helix-turn-helix domain protein CYA_2023 1 None None None 86606164 Common - membrane protein/conserved domain protein CYA_1497 24 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 86607033 Nonpathogen - hypothetical protein CYA_2409 3 None None None 86605414 Common - polyA polymerase family protein CYA_0702 230 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 86605023 Common - hypothetical protein CYA_0302 7 None None None 86606953 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase CYA_2324 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 86607409 Common - CpeS-like protein CYA_2807 10 None None None 86605144 Nonpathogen - hypothetical protein CYA_0425 1 None None None 86606137 Common - hypothetical protein CYA_1470 27 COG4632 EpsL, Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase Carbohydrate transport and metabolism 86607455 Nonpathogen - hypothetical protein CYA_2855 1 None None None 86607017 Common - NAD(P)H-quinone oxidoreductase subunit F CYA_2391 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 86606091 Common - hypothetical protein CYA_1423 9 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606772 Common - hypothetical protein CYA_2132 10 None None None 86607126 Common phoD alkaline phosphatase CYA_2506 58 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 86604763 Common - transcriptional regulator, Fur family CYA_0030 195 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 86606271 Nonpathogen - hypothetical protein CYA_1610 1 None None None 86607396 Common - ferric iron ABC transporter (FeT) family, ATP-binding protein CYA_2794 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 86605223 Nonpathogen - putative phycobilisome linker polypeptide, phycocyanin-associated, rod CYA_0506 1 None None None 86606811 Common - peptidase, M16B family CYA_2171 200 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 86606635 Common - peptidase, S24 (LexA) family CYA_1992 57 COG2932 COG2932, Predicted transcriptional regulator Transcription 86605080 Nonpathogen - hypothetical protein CYA_0361 9 COG1254 AcyP, Acylphosphatases Energy production and conversion 86606372 Common - transporter, arsenical resistance-3 (ACR3) family CYA_1717 128 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 86606946 Common - hypothetical protein CYA_2318 8 None None None 86605698 Common - ISSoc4, transposase orfA CYA_0999 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606941 Common - hypothetical protein CYA_2313 27 COG2251 COG2251, Predicted nuclease (RecB family) General function prediction only 86606239 Nonpathogen - hypothetical protein CYA_1575 1 None None None 86606618 Common folD FolD bifunctional protein CYA_1974 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 86607108 Common secG preprotein translocase subunit SecG CYA_2487 10 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 86607244 Common - cytochrome c family protein CYA_2630 14 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 86605237 Common - NAD(P)H-quinone oxidoreductase subunit D CYA_0520 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 86606934 Common tyrA prephenate dehydrogenase CYA_2300 157 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 86607110 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase CYA_2489 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 86606640 Nonpathogen - hypothetical protein CYA_1997 2 None None None 86606149 Common - peptidylprolyl cis-trans isomerase, cyclophilin-type CYA_1482 198 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 86607000 Nonpathogen - hypothetical protein CYA_2375 1 COG4547 CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) Coenzyme metabolism 86606256 Common - NAD(P)H-quinone oxidoreductase subunit F CYA_1593 208 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 86605722 Common - transporter, lead (Pb2+) uptake porter (PbrT) family CYA_1026 43 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 86605687 Nonpathogen - hypothetical protein CYA_0989 3 None None None 86605964 Common - polar amino amino acid ABC transporter (PAAT) family, permease protein CYA_1282 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 86607186 Nonpathogen - hypothetical protein CYA_2567 1 None None None 86607437 Nonpathogen - hypothetical protein CYA_2835 1 None None None 86605029 Nonpathogen - hypothetical protein CYA_0308 4 None None None 86605668 Common surE-2 acid phosphatase SurE CYA_0967 185 COG0496 SurE, Predicted acid phosphatase General function prediction only 86605800 Common - putative membrane protein, YjgP/YjgQ family CYA_1111 90 COG0795 COG0795, Predicted permeases General function prediction only 86607220 Common - flavodoxin FldA CYA_2605 76 COG0716 FldA, Flavodoxins Energy production and conversion 86606594 Common - ABC1 domain protein CYA_1948 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 86606885 Common - hypothetical protein CYA_2248 9 COG5464 COG5464, Uncharacterized conserved protein Function unknown 86606867 Common - peptidase, S1C (protease Do) family CYA_2229 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 86604990 Common - glycogen debranching enzyme family protein CYA_0269 50 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 86606484 Common - Mo-dependent nitrogenase family protein CYA_1833 9 None None None 86606251 Common - 5-formyltetrahydrofolate cyclo-ligase family protein CYA_1588 24 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 86605893 Common - hydrophobic amino acid uptake transporter (HAAT) ABC transporter family, ATP-binding protein CYA_1209 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 86606438 Common - hypothetical protein CYA_1783 6 None None None 86604757 Common - translation-associated GTPase CYA_0024 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 86604888 Common cax calcium/proton exchanger CYA_0159 22 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 86606237 Common - histidine triad family protein CYA_1573 229 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 86606325 Common - putative cobalamin biosynthesis protein CobW CYA_1669 128 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 86606162 Common - sensor histidine kinase CYA_1494 7 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86605469 Common secA preprotein translocase subunit SecA CYA_0762 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 86605435 Common - hypothetical protein CYA_0723 7 None None None 86605313 Common - RNA polymerase sigma factor SigF CYA_0597 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 86604878 Common - peptide/opine/nickel ABC transporter (PepT) family, substrate-binding protein CYA_0149 200 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 86605204 Common - cation transporter, cation diffusion facilitator (CDF) family CYA_0486 205 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 86607215 Nonpathogen - hypothetical protein CYA_2599 1 None None None 86604954 Common gvpG gas vesicle protein G CYA_0230 5 None None None 86605621 Common sppA-1 signal peptide peptidase SppA, 36K type CYA_0919 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86606192 Nonpathogen - hypothetical protein CYA_1527 1 None None None 86607478 Common - universal stress protein family CYA_2878 138 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 86606728 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type CYA_2088 183 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 86605793 Common - arsenite-antimonite (ArsAB) efflux family transporter, ATP-binding protein CYA_1104 92 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 86605114 Common - hypothetical protein CYA_0396 8 None None None 86605912 Common - ExoD family protein CYA_1229 45 COG3932 COG3932, Uncharacterized ABC-type transport system, permease components General function prediction only 86605307 Common hisD histidinol dehydrogenase CYA_0591 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 86605589 Common cas2-3 CRISPR-associated protein Cas2 CYA_0885 27 COG1343 COG1343, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 86605590 Common - ISSoc1, transposase CYA_0887 65 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605866 Common rplC 50S ribosomal protein L3 CYA_1178 219 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 86605817 Common - ISSoc3, orfA transposase CYA_1128 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607500 Nonpathogen - hypothetical protein CYA_2902 3 None None None 86605041 Common - hypothetical protein CYA_0320 11 None None None 86607119 Nonpathogen - putative lipoprotein CYA_2499 2 None None None 86606329 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein CYA_1673 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 86607297 Common gid tRNA (uracil-5-)-methyltransferase Gid CYA_2686 118 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 86607234 Common pyrD dihydroorotate dehydrogenase 2 CYA_2620 192 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 86606153 Common - S-layer domain protein CYA_1486 8 None None None 86604896 Common metE-2 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase CYA_0167 139 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 86606804 Nonpathogen - hypothetical protein CYA_2164 2 None None None 86607473 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II CYA_2873 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 86605635 Nonpathogen - hypothetical protein CYA_0933 2 None None None 86606006 Common - ABC transporter, permease protein CYA_1329 165 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 86604913 Nonpathogen - hypothetical protein CYA_0187 1 None None None 86605766 Nonpathogen - hypothetical protein CYA_1070 1 None None None 86606368 Common - hypothetical protein CYA_1713 7 None None None 86606189 Common gyrB DNA gyrase subunit B CYA_1523 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 86607153 Common - Fe-S metabolism protein, SufE family CYA_2533 107 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 86605300 Common glyQ glycyl-tRNA synthetase subunit alpha CYA_0584 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 86606450 Common petD cytochrome b6-f complex, subunit IV CYA_1797 45 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 86606547 Common kaiC circadian clock protein KaiC CYA_1900 79 COG0467 RAD55, RecA-superfamily ATPases implicated in signal transduction Signal transduction mechanisms 86605492 Common - coproporphyrinogen III oxidase CYA_0785 206 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 86606287 Common - ABC transporter, ATP-binding protein CYA_1626 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 86607229 Common - hypothetical protein CYA_2615 11 None None None 86605965 Common - polar amino amino acid ABC transporter (PAAT) family, permease protein CYA_1283 172 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 86606766 Common trmE tRNA modification GTPase TrmE CYA_2126 231 COG0486 ThdF, Predicted GTPase General function prediction only 86605833 Common - hypothetical protein CYA_1145 17 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 86606555 Nonpathogen - hypothetical protein CYA_1908 7 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 86606293 Common - biotin/lipoate A/B protein ligase family protein CYA_1633 34 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 86605553 Common - rubredoxin CYA_0849 104 COG1773 COG1773, Rubredoxin Energy production and conversion 86605790 Common hemG protoporphyrinogen oxidase CYA_1101 54 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 86606813 Common - hypothetical protein CYA_2173 37 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 86606567 Common - urea ABC transporter, ATP-binding protein CYA_1921 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 86604825 Nonpathogen - hypothetical protein CYA_0095 3 None None None 86605618 Common - sensor histidine kinase CYA_0916 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86604851 Common - hypothetical protein CYA_0121 10 None None None 86606898 Nonpathogen - hypothetical protein CYA_2260 1 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 86605501 Common - sensor histidine kinase CYA_0795 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86607073 Nonpathogen - hypothetical protein CYA_2451 1 None None None 86607352 Common - ferredoxin-thioredoxin reductase, variable subunit CYA_2750 8 None None None 86606383 Common - hypothetical protein CYA_1728 22 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86607328 Common - ISSoc4, transposase orfA CYA_2722 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605405 Common lipA-1 lipoyl synthase CYA_0692 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 86604829 Common - glycosyl transferase, group 1 CYA_0099 96 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 86607275 Common panC/cmk pantoate--beta-alanine ligase/cytidylate kinase CYA_2663 213 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 86605582 Nonpathogen - hypothetical protein CYA_0878 1 None None None 86606453 Common - peptidase, M61 (glycyl aminopeptidase) family CYA_1800 56 COG3975 COG3975, Predicted protease with the C-terminal PDZ domain General function prediction only 86606093 Nonpathogen - hypothetical protein CYA_1425 1 None None None 86605384 Common - antioxidant, AhpC/Tsa family CYA_0672 230 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 86605845 Common infA translation initiation factor IF-1 CYA_1157 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 86606790 Common - fasciclin domain protein CYA_2150 68 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 86606864 Common apcB-2 allophycocyanin, beta subunit CYA_2226 10 None None None 86607050 Nonpathogen psbL photosystem II reaction center protein PsbL CYA_2428 1 None None None 86606123 Nonpathogen - hypothetical protein CYA_1455 20 COG3391 COG3391, Uncharacterized conserved protein Function unknown 86606958 Common - hypothetical protein CYA_2331 4 None None None 86607420 Common prc-2 C-terminal processing peptidase CYA_2818 185 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 86605508 Common clpX ATP-dependent protease ATP-binding subunit CYA_0802 225 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 86606746 Common - hypothetical protein CYA_2107 22 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86605354 Common - NAD(P)H-quinone oxidoreductase subunit F CYA_0640 208 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 86606539 Common - DNA-binding response regulator RpaA CYA_1892 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86605599 Nonpathogen - hypothetical protein CYA_0897 1 None None None 86606477 Common nifS cysteine desulfurase CYA_1826 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 86605053 Common lysS lysyl-tRNA synthetase CYA_0333 246 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 86606079 Common - inositol-5-monophosphate dehydrogenase CYA_1409 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 86605218 Common - putative glutamate--cysteine ligase CYA_0500 64 COG2170 COG2170, Uncharacterized conserved protein Function unknown 86605538 Nonpathogen - V4R domain protein CYA_0834 4 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 86607335 Nonpathogen - hypothetical protein CYA_2731 1 None None None 86604737 Common - metalloprotease, ATP-dependent, FtsH family CYA_0004 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 86605042 Common - hypothetical protein CYA_0321 88 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 86606976 Common - fatty acid desaturase CYA_2349 70 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 86605070 Common nusB transcription antitermination factor NusB CYA_0350 132 COG0781 NusB, Transcription termination factor Transcription 86605390 Common - hypothetical protein CYA_0678 18 COG2119 COG2119, Predicted membrane protein Function unknown 86605759 Common - NitT/TauT family ABC transporter, ATP-binding protein CYA_1064 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 86605643 Common cobD-2 threonine phosphate decarboxylase CYA_0941 224 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 86605482 Nonpathogen - hypothetical protein CYA_0775 1 None None None 86604864 Common - long-chain-fatty-acid-CoA ligase-like protein CYA_0133 217 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 86606378 Common sulP sulfate permease CYA_1724 160 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 86606530 Common - serine/threonine protein kinase CYA_1882 141 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 86606582 Common chlI magnesium chelatase, ATPase subunit I CYA_1936 74 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 86605037 Common pds phytoene desaturase CYA_0316 35 COG3349 COG3349, Uncharacterized conserved protein Function unknown 86605156 Common - ISSoc6, orfA transposase CYA_0437 69 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605011 Common - hypothetical protein CYA_0290 7 None None None 86607021 Common fni isopentenyl pyrophosphate isomerase CYA_2395 83 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 86607419 Common argF ornithine carbamoyltransferase CYA_2817 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 86607312 Common gltS ferredoxin-dependent glutamate synthase CYA_2704 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 86605713 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CYA_1015 171 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 86604900 Common moaA molybdenum cofactor biosynthesis protein A CYA_0172 196 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 86606224 Nonpathogen - hypothetical protein CYA_1560 1 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 86606677 Common - RNA polymerase sigma factor SigC CYA_2037 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 86604970 Common ilvC ketol-acid reductoisomerase CYA_0246 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 86605529 Common gvpJ gas vesicle protein J CYA_0825 22 None None None 86607492 Common - hypothetical protein CYA_2892 10 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86606878 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase CYA_2240 126 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 86604841 Nonpathogen - hypothetical protein CYA_0111 1 None None None 86605520 Common - hypothetical protein CYA_0814 7 None None None 86605456 Nonpathogen - hypothetical protein CYA_0746 1 None None None 86605673 Common - hypothetical protein CYA_0973 22 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 86607367 Nonpathogen - hypothetical protein CYA_2764 1 None None None 86605440 Common cas2-2 CRISPR-associated protein Cas2 CYA_0728 29 None None None 86606851 Nonpathogen - hypothetical protein CYA_2212 3 None None None 86607262 Common - putative methyltransferase CYA_2649 196 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 86605776 Common - tetratricopeptide repeat protein CYA_1080 6 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 86605519 Nonpathogen - putative membrane proteinprotein CYA_0813 8 COG4241 COG4241, Predicted membrane protein Function unknown 86605981 Common rpsG 30S ribosomal protein S7 CYA_1300 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 86605750 Common - methyltransferase, UbiE/COQ5 family CYA_1055 186 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86605449 Nonpathogen - hypothetical protein CYA_0738 1 None None None 86606388 Common pstC-2 phosphate ABC transporter, permease protein PstC CYA_1733 227 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 86606392 Common - hypothetical protein CYA_1737 15 None None None 86606613 Common - alpha-2-macroglobulin family protein CYA_1968 85 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 86606371 Common - hypothetical protein CYA_1716 10 None None None 86606502 Common - putative phycobilisome 120 kDa linker polypeptide, core CYA_1851 10 None None None 86605078 Common maf Maf-like protein CYA_0360 195 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 86606604 Common - ISSoc3, orfB transposase CYA_1959 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607325 Common - hypothetical protein CYA_2717 10 None None None 86606670 Common - TonB family protein CYA_2030 38 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 86605936 Common pth peptidyl-tRNA hydrolase CYA_1253 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 86607086 Common - dps protein CYA_2464 93 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 86606688 Common - ABC transporter, ATP-binding protein CYA_2048 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 86606845 Nonpathogen - hypothetical protein CYA_2205 1 None None None 86607376 Nonpathogen - putative cyclase/dehydrase CYA_2774 11 None None None 86606667 Common - DNA-binding response regulator CYA_2027 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86606205 Common - hypothetical protein CYA_1540 7 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86606840 Common rrmJ ribosomal RNA large subunit methytransferase J CYA_2199 44 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 86606702 Common glgB glycogen branching enzyme CYA_2062 158 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 86604832 Nonpathogen - hypothetical protein CYA_0101 1 None None None 86604979 Common - oxidoreductase, FAD-binding CYA_0258 38 COG3380 COG3380, Predicted NAD/FAD-dependent oxidoreductase General function prediction only 86606404 Common carB carbamoyl phosphate synthase large subunit CYA_1749 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 86605185 Common msrA methionine-S-sulfoxide reductase CYA_0467 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 86605889 Common - acyltransferase family protein CYA_1204 100 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 86605979 Common - ComF family protein CYA_1298 146 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 86604918 Common - heavy metal ABC transporter (HMT) family, permease/ATP-binding protein CYA_0194 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 86605701 Common - Orn/Lys/Arg decarboxylase CYA_1002 95 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 86607289 Common cobQ cobyric acid synthase CYA_2678 150 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 86605234 Nonpathogen - hypothetical protein CYA_0517 1 None None None 86605978 Common - HflC/HflK family protein CYA_1297 18 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 86606626 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase CYA_1982 210 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 86606120 Common rpsK 30S ribosomal protein S11 CYA_1452 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 86605271 Nonpathogen - hypothetical protein CYA_0555 1 None None None 86605825 Common - ISSoc3, orfA transposase CYA_1137 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605338 Common - glycosyl transferase, group 2 family protein CYA_0623 59 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 86607194 Common - sensor histidine kinase CYA_2575 217 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 86606750 Nonpathogen - hypothetical protein CYA_2110 2 None None None 86606491 Common - ferredoxin, 2Fe-2S CYA_1840 19 COG0633 Fdx, Ferredoxin Energy production and conversion 86605269 Common - putative lipoprotein CYA_0552 7 None None None 86606520 Common - hypothetical protein CYA_1870 8 None None None 86604791 Common - hypothetical protein CYA_0059 10 None None None 86607281 Nonpathogen - hypothetical protein CYA_2669 1 None None None 86606020 Common tynA tyramine oxidase CYA_1346 22 COG3733 TynA, Cu2+-containing amine oxidase Secondary metabolites biosynthesis, transport, and catabolism 86606173 Common amt ammonium transporter CYA_1507 202 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 86605285 Common - hypothetical protein CYA_0569 10 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 86604795 Nonpathogen - hypothetical protein CYA_0063 1 None None None 86606465 Common ruvB Holliday junction DNA helicase B CYA_1812 217 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 86606706 Nonpathogen - RNA polymerase sigma-70 domain protein CYA_2066 7 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 86606731 Nonpathogen - hypothetical protein CYA_2091 1 None None None 86606737 Common psbU photosystem II complex extrinsic protein precursor PsuB CYA_2097 9 None None None 86604860 Common dnaK-1 chaperone protein DnaK CYA_0130 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 86606874 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase CYA_2236 226 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86606955 Common - oxidoreductase, FAD-binding CYA_2328 56 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 86605488 Common - alkaline phosphatase CYA_0781 77 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 86607182 Common - transporter, small conductance mechanosensitive ion channel (MscS) family CYA_2563 195 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 86607161 Nonpathogen cmr6 CRISPR-associated RAMP protein, Cmr6 family CYA_2542 5 COG1604 COG1604, Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) DNA replication, recombination, and repair 86605003 Common - ATPase, AAA family CYA_0283 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 86606836 Common - hypothetical protein CYA_2196 10 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 86605372 Common clpP ATP-dependent Clp protease proteolytic subunit CYA_0659 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 86605248 Common polA DNA polymerase I CYA_0531 218 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 86605784 Common sun ribosomal RNA small subunit methyltransferase B CYA_1094 209 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 86606084 Common gyrA DNA gyrase subunit A CYA_1415 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 86606964 Common - hypothetical protein CYA_2337 10 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 86605950 Common - hypothetical protein CYA_1267 25 COG2105 COG2105, Uncharacterized conserved protein Function unknown 86607132 Common dprA DNA protecting protein DprA CYA_2512 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 86606008 Common - hypothetical protein CYA_1332 57 COG2187 COG2187, Uncharacterized protein conserved in bacteria Function unknown 86605735 Common - transferase hexapaptide repeat protein CYA_1040 184 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 86605531 Nonpathogen gvpC gas vesicle structural protein GvpC CYA_0827 1 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 86606343 Common - cytochrome c550 CYA_1687 10 None None None 86607040 Common - transcriptional regulator, LysR family CYA_2417 193 COG0583 LysR, Transcriptional regulator Transcription 86604739 Nonpathogen - hypothetical protein CYA_0006 1 None None None 86606357 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase CYA_1701 227 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 86605429 Nonpathogen - hypothetical protein CYA_0717 2 None None None 86607009 Common - protochlorophyllide oxidoreductase CYA_2383 120 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 86607156 Common - hypothetical protein CYA_2536 35 COG1371 COG1371, Uncharacterized conserved protein Function unknown 86606384 Common purB adenylosuccinate lyase CYA_1729 240 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 86605875 Common cobO-1 cob(I)alamin adenosyltransferase CYA_1188 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 86606600 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase CYA_1955 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 86605491 Common uvrA excinuclease ABC subunit A CYA_0784 235 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 86607200 Common - ISSoc3, orfB transposase CYA_2581 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605559 Common - hypothetical protein CYA_0855 2 None None None 86605717 Common - hypothetical protein CYA_1021 48 COG0433 COG0433, Predicted ATPase General function prediction only 86604749 Common gvpW gas vesicle protein W CYA_0016 5 None None None 86606983 Nonpathogen petM cytochrome b6f complex subunit PetM CYA_2357 1 None None None 86604965 Common - hypothetical protein CYA_0241 17 COG4872 COG4872, Predicted membrane protein Function unknown 86604883 Common - putative permease CYA_0154 68 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 86605000 Common - hypothetical protein CYA_0279 16 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 86605631 Common cobA uroporphyrin-III C-methyltransferase CYA_0929 204 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 86606513 Common - polyA polymerase family protein CYA_1863 230 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 86605856 Common rplN 50S ribosomal protein L14 CYA_1168 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 86606246 Common - carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein CYA_1583 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 86606541 Common - hypothetical protein CYA_1894 26 COG4398 COG4398, Uncharacterized protein conserved in bacteria Function unknown 86605093 Common - inositol monophosphate family protein CYA_0375 169 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 86606698 Common - HAD-superfamily hydrolase, subfamily IA, variant 3 CYA_2058 172 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 86607255 Common rph ribonuclease PH CYA_2643 208 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 86605387 Common mgtE-1 magnesium transporter CYA_0675 171 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 86606262 Nonpathogen - hypothetical protein CYA_1600 1 None None None 86607394 Common folE GTP cyclohydrolase I CYA_2792 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 86607432 Common tmk thymidylate kinase CYA_2830 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 86607204 Common - urease, beta subunit, truncation CYA_2585 68 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 86605891 Common - putative cysteine synthase B CYA_1206 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 86605934 Common - putative methyl-accepting chemotaxis protein CYA_1250 83 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 86604869 Common - hypothetical protein CYA_0139 15 COG4636 Uma2, Uncharacterized protein conserved in cyanobacteria Function unknown 86604766 Common - hypothetical protein CYA_0034 20 COG2119 COG2119, Predicted membrane protein Function unknown 86606853 Common rpmB 50S ribosomal protein L28 CYA_2214 11 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 86607066 Nonpathogen - hypothetical protein CYA_2443 1 None None None 86606980 Common - oxidoreductase, short chain dehydrogenase/reductase family CYA_2353 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 86606717 Common - hypothetical protein CYA_2077 19 COG5496 COG5496, Predicted thioesterase General function prediction only 86606849 Common - BioY family protein CYA_2210 62 COG1268 BioY, Uncharacterized conserved protein General function prediction only 86606722 Common - ISSoc4, transposase orfA CYA_2082 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605018 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA CYA_0296 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 86605601 Common - hypothetical protein CYA_0899 51 COG2361 COG2361, Uncharacterized conserved protein Function unknown 86605957 Nonpathogen - hypothetical protein CYA_1275 1 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 86605831 Common - HNH endonuclease domain protein CYA_1143 42 COG1403 McrA, Restriction endonuclease Defense mechanisms 86606597 Nonpathogen - putative lipoprotein CYA_1951 1 None None None 86607232 Common - response regulator CYA_2618 218 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 86605549 Common - chloride transporter, chloride channel (ClC) family CYA_0845 93 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 86607035 Common metH methionine synthase CYA_2411 180 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 86605471 Common - putative polysaccharide deacetylase CYA_0764 104 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 86604816 Common - glyoxalase family protein CYA_0086 34 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 86605051 Common - hypothetical protein CYA_0331 9 None None None 86606821 Common - N-acetylmuramoyl-L-alanine amidase CYA_2181 184 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 86606692 Common rplU 50S ribosomal protein L21 CYA_2052 206 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 86605574 Common - phospholipase/carboxylesterase family protein CYA_0870 121 COG0400 COG0400, Predicted esterase General function prediction only 86607453 Common - CAAX amino terminal protease family protein CYA_2853 9 None None None 86606806 Nonpathogen - Piwi domain protein CYA_2166 4 COG1431 COG1431, Uncharacterized protein containing piwi/argonaute domain Translation, ribosomal structure and biogenesis 86605179 Common cobH-1 precorrin-8X methylmutase CYA_0461 118 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 86605651 Common - pentapeptide repeat family protein CYA_0949 11 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86606219 Common pstB-1 phosphate ABC transporter, ATP-binding protein CYA_1555 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 86605675 Common - putative S-layer protein CYA_0975 22 COG3889 COG3889, Predicted solute binding protein General function prediction only 86606040 Common - conserved hypothetical protein TIGR00103 CYA_1369 165 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 86604945 Common cpcB-1 phycocyanin, beta subunit CYA_0221 10 None None None 86606944 Common - DNA-binding response regulator CYA_2316 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 86606681 Common cpcC phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod CYA_2041 10 None None None 86607458 Common sodB superoxide dismutase, Fe CYA_2858 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 86604813 Nonpathogen - hypothetical protein CYA_0083 2 None None None 86607124 Nonpathogen - hypothetical protein CYA_2504 2 None None None 86606051 Common - hypothetical protein CYA_1380 9 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 86607407 Common - glycosyl hydrolase, family 57 CYA_2805 40 COG1449 COG1449, Alpha-amylase/alpha-mannosidase Carbohydrate transport and metabolism 86607045 Nonpathogen - hypothetical protein CYA_2422 2 None None None 86607019 Common - ISSoc2, transposase CYA_2393 11 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605239 Nonpathogen - V4R domain protein CYA_0522 4 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 86605177 Common - hydrolase, alpha/beta fold family CYA_0459 113 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86607387 Common ugpB glycerol-3-phosphate ABC transporter, glycerol-3-phosphate binding protein CYA_2785 88 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 86607246 Nonpathogen - hypothetical protein CYA_2632 1 None None None 86606646 Common - hypothetical protein CYA_2003 38 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 86605627 Common rpsT 30S ribosomal protein S20 CYA_0925 112 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 86605806 Common - GTP-binding protein CYA_1116 10 COG1100 COG1100, GTPase SAR1 and related small G proteins General function prediction only 86606203 Common - creatininase CYA_1538 88 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 86604830 Common - GAF/SpoIIE domain protein CYA_0100 86 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 86604959 Common - bifunctional sterol desaturase/short chain dehydrogenase CYA_0235 7 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 86607106 Common - HAD-superfamily hydrolase, subfamily IA, variant 3 CYA_2485 194 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 86606633 Common - sensor histidine kinase CYA_1989 14 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 86606135 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein CYA_1468 222 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 86607377 Nonpathogen - hypothetical protein CYA_2775 1 None None None 86605754 Common - 5'-nucleotidase family protein CYA_1059 117 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 86605761 Common - hypothetical protein CYA_1066 9 None None None 86605477 Common - conserved hypothetical protein TIGR00730 CYA_0770 108 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 86606414 Nonpathogen - TM2 domain protein CYA_1760 6 COG2314 XynA, Predicted membrane protein Function unknown 86605215 Common - hypothetical protein CYA_0497 7 None None None 86606922 Nonpathogen - hypothetical protein CYA_2288 1 None None None 86605962 Nonpathogen - hypothetical protein CYA_1281 2 None None None 86605342 Common dapA dihydrodipicolinate synthase CYA_0627 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 86605085 Common - hypothetical protein CYA_0366 7 None None None 86604837 Nonpathogen - hypothetical protein CYA_0106 1 None None None 86606014 Common truB tRNA pseudouridine synthase B CYA_1338 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 86605330 Common ntrC-1 nitrate ABC transporter, ATP-binding protein NtrC CYA_0615 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 86605167 Common - CobQ/CobB/MinD/ParA nucleotide binding domain protein CYA_0448 178 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 86605169 Common - hypothetical protein CYA_0450 14 COG4929 COG4929, Uncharacterized membrane-anchored protein Function unknown 86607447 Common - ISSoc4, transposase orfB CYA_2846 55 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606764 Common - tetratricopeptide repeat CYA_2124 59 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 86605150 Common - hypothetical protein CYA_0431 5 None None None 86607435 Common - CAB/ELIP/HLIP family protein CYA_2834 10 None None None 86606016 Common trpS tryptophanyl-tRNA synthetase CYA_1340 230 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606425 Nonpathogen - hypothetical protein CYA_1771 1 None None None 86605229 Common valS valyl-tRNA synthetase CYA_0512 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86606027 Common - hypothetical protein CYA_1355 10 None None None 86605193 Common pflA pyruvate formate-lyase activating enzyme CYA_0475 125 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 86605382 Nonpathogen - hypothetical protein CYA_0669 1 None None None 86607380 Common - hypothetical protein CYA_2778 24 COG1547 COG1547, Uncharacterized conserved protein Function unknown 86606745 Common - anti-anti-sigma factor CYA_2105 68 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 86605412 Common - putative protease CYA_0700 82 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 86606650 Nonpathogen - hypothetical protein CYA_2007 1 None None None 86604951 Common - hypothetical protein CYA_0227 11 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 86606140 Common - putative cob(I)alamin adenosyltransferase CYA_1473 130 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 86606077 Common groEL chaperonin GroEL CYA_1407 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 86606035 Nonpathogen - hypothetical protein CYA_1364 2 None None None 86606906 Common - biotin--acetyl-CoA-carboxylase ligase CYA_2270 100 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 86604801 Nonpathogen - hypothetical protein CYA_0070 1 None None None 86607053 Nonpathogen - S-layer domain protein CYA_2431 12 None None None 86606047 Nonpathogen - hypothetical protein CYA_1376 1 None None None 86607314 Nonpathogen - hypothetical protein CYA_2706 1 None None None 86606672 Common - iron chelate ABC transporter (FeCT) family, ATP-binding protein CYA_2032 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 90296799 Nonpathogen - ISSoc3, orfA transposase, interruption-N CYA_2721 1 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605740 Nonpathogen - hypothetical protein CYA_1045 1 None None None 86605846 Common map-2 methionine aminopeptidase CYA_1158 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 86606151 Common - NAD(P)H-quinone oxidoreductase subunit B CYA_1484 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 86606768 Common - tetratricopeptide repeat protein CYA_2128 80 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 86606125 Common - dolichyl-phosphate-mannose-protein mannosyltransferase CYA_1457 41 COG1928 PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase Posttranslational modification, protein turnover, chaperones 86606289 Common - low molecular weight phosphotyrosine protein phosphatase family protein CYA_1629 136 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 86605507 Common - K+ transporter, Trk family CYA_0801 149 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 86605725 Common - 4Fe-4S binding domain CYA_1029 11 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 86607415 Common - amino acid transporter, amino acid-binding protein CYA_2814 152 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 86605680 Common - ISSoc1, transposase CYA_0981 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606234 Common - ATPase, AAA family CYA_1570 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 86605419 Common - hypothetical protein CYA_0708 142 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 86604853 Common - phycobilisome degradation family protein CYA_0123 5 None None None 86606451 Common leuB 3-isopropylmalate dehydrogenase CYA_1798 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 86607129 Nonpathogen - hypothetical protein CYA_2508 1 None None None 86604827 Common - transporter, major facilitator family CYA_0097 43 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 86604911 Common treZ malto-oligosyltrehalose trehalohydrolase CYA_0184 164 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 86605768 Common - glycosyl transferase, group 2 CYA_1073 132 COG2246 COG2246, Predicted membrane protein Function unknown 86606290 Common - NADH dehydrogenase subunit K CYA_1630 155 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 86606355 Common zwf glucose-6-phosphate 1-dehydrogenase CYA_1699 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 86606299 Common - putative iron-sulfur cluster binding protein CYA_1641 140 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 86607277 Common menE O-succinylbenzoic acid--CoA ligase CYA_2666 217 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 86607151 Common - manganese/zinc/iron chelate ABC ransporter (MZT) family, ATP-binding protein CYA_2531 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 86607079 Nonpathogen - hypothetical protein CYA_2457 1 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 86605403 Nonpathogen - hypothetical protein CYA_0691 1 None None None 86606860 Common - putative N-hydroxyarylamine O-acetyltransferase, truncation CYA_2222 4 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 86605242 Nonpathogen bchJ putative bacteriochlorophyll 4-vinyl reductase CYA_0525 7 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 86606584 Common - ISSoc2, transposase CYA_1938 9 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605399 Common - ISSoc1, transposase CYA_0687 35 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 86607010 Common chlN light-independent protochlorophyllide reductase subunit N CYA_2385 28 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 86605012 Common - RNA methyltransferase, TrmH family, group 3 CYA_0291 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 86606212 Common - circadian phase modifier CpmA-like protein CYA_1548 64 COG1691 COG1691, NCAIR mutase (PurE)-related proteins General function prediction only 86606095 Nonpathogen - hypothetical protein CYA_1427 1 None None None 86604846 Common - hypothetical protein CYA_0116 11 COG4371 COG4371, Predicted membrane protein Function unknown 86606577 Common - fatty acid desaturase CYA_1931 32 COG3239 DesA, Fatty acid desaturase Lipid metabolism 86606998 Common - copper-translocating P-type ATPase CYA_2372 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 86605356 Nonpathogen psbM photosystem II reaction center protein PsbM CYA_0642 2 None None None 86606792 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha CYA_2152 175 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 86607422 Common proA gamma-glutamyl phosphate reductase CYA_2820 187 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 86607287 Common - inositol monophosphatase family protein CYA_2675 211 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 86605116 Common - ISSoc2, resolvase CYA_0397 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86607484 Common - rare lipoprotein A family protein CYA_2884 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 86605467 Common purU formyltetrahydrofolate deformylase CYA_0760 216 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 86606883 Common - hypothetical protein CYA_2246 20 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 86604820 Nonpathogen - hypothetical protein CYA_0090 1 None None None 86607392 Common apcD allophycocyanin alpha, B subunit CYA_2790 10 None None None 86606082 Common - hypothetical protein CYA_1413 11 None None None 86605406 Common - hypothetical protein CYA_0694 8 None None None 86605027 Nonpathogen - hypothetical protein CYA_0306 7 None None None 86605266 Common - ISSoc3, orfA transposase CYA_0549 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606661 Nonpathogen - hypothetical protein CYA_2019 1 None None None 86606592 Common - iron-sulfur cluster-binding protein CYA_1946 34 COG0633 Fdx, Ferredoxin Energy production and conversion 86605587 Common cas6 CRISPR-associated protein Cas6 CYA_0883 10 COG5551 COG5551, Uncharacterized conserved protein Function unknown 86606302 Common - ISSoc2, resolvase CYA_1645 23 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86605921 Common tig trigger factor CYA_1238 213 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 86604992 Nonpathogen - hypothetical protein CYA_0271 1 None None None 86605600 Common - mo-dependent nitrogenase family protein CYA_0898 9 None None None 86605887 Common - haloacid dehalogenase, IA family protein CYA_1203 56 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 86605850 Common rpsE 30S ribosomal protein S5 CYA_1162 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 86607072 Nonpathogen - S-layer domain protein CYA_2450 6 None None None 86606436 Common rplJ 50S ribosomal protein L10 CYA_1782 204 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 86605919 Common - hypothetical protein CYA_1236 10 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 86606147 Nonpathogen - hypothetical protein CYA_1480 1 None None None 86605689 Common - heptosyltransferase family protein CYA_0990 84 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 86607405 Common - PDZ domain protein CYA_2803 21 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 86607333 Common aroE shikimate 5-dehydrogenase CYA_2729 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 86605451 Common ppsA phosphoenolpyruvate synthase CYA_0741 236 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 86604759 Common - O-antigen polymerase family protein CYA_0026 13 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 86606974 Common lipA-3 lipoyl synthase CYA_2347 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 86605990 Nonpathogen - hypothetical protein CYA_1309 1 None None None 86606115 Common rpsI 30S ribosomal protein S9 CYA_1447 246 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 86607179 Common - proton extrusion protein PcxA CYA_2560 9 None None None 86605136 Nonpathogen - hypothetical protein CYA_0417 1 None None None 86607399 Common - sensor histidine kinase CYA_2797 54 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86605395 Nonpathogen - hypothetical protein CYA_0683 6 None None None 86606337 Common aspS aspartyl-tRNA synthetase CYA_1681 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 86605324 Common - hypothetical protein CYA_0609 6 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 86607174 Common eno phosphopyruvate hydratase CYA_2554 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 86606104 Nonpathogen - peptidase, M8 (leishmanolysin) family CYA_1436 5 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 86605494 Common dnaJ chaperone protein DnaJ CYA_0788 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 86607222 Nonpathogen - hypothetical protein CYA_2607 1 None None None 86604934 Nonpathogen - hypothetical protein CYA_0210 1 None None None 86606327 Nonpathogen - hypothetical protein CYA_1672 1 None None None 86606556 Common - hypothetical protein CYA_1909 82 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 86605864 Common rplW 50S ribosomal protein L23 CYA_1176 178 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 86605666 Common - hydrolase, alpha/beta fold family CYA_0964 157 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86606195 Nonpathogen - hypothetical protein CYA_1530 1 None None None 86605410 Nonpathogen - hypothetical protein CYA_0698 1 None None None 86606620 Common xseA exodeoxyribonuclease VII large subunit CYA_1976 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 86606258 Common - CO2 hydration protein CYA_1595 9 None None None 86607112 Nonpathogen - hypothetical protein CYA_2491 5 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 86605928 Nonpathogen - TonB family protein CYA_1245 9 COG5373 COG5373, Predicted membrane protein Function unknown 86607502 Common rnpA ribonuclease P CYA_2904 3 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 86606972 Nonpathogen - hypothetical protein CYA_2345 1 None None None 86605799 Common - pentapeptide repeat family protein CYA_1110 28 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 86605592 Nonpathogen csx3 CRISPR-associated protein, Csx3 family CYA_0890 7 None None None 86605989 Common - oxidoreductase, FAD-dependent CYA_1308 100 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 86607130 Common - transporter, solute:sodium symporter (SSS) family CYA_2510 151 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 86605076 Nonpathogen - hypothetical protein CYA_0357 1 None None None 86606775 Common - hydrolase, NUDIX family CYA_2135 173 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 86606394 Common - methylcitrate synthase CYA_1739 194 COG0372 GltA, Citrate synthase Energy production and conversion 86607098 Common ppk polyphosphate kinase CYA_2477 162 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 86607323 Common gltX glutamyl-tRNA synthetase CYA_2715 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 86606112 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase CYA_1444 220 COG1049 AcnB, Aconitase B Energy production and conversion 86605447 Common cas3 CRISPR-associated helicase Cas3 CYA_0735 76 COG1203 COG1203, Predicted helicases General function prediction only 86605497 Common - hypothetical protein CYA_0791 5 None None None 86605703 Nonpathogen - peptidase propeptide/YPEB domain protein CYA_1004 1 COG3212 COG3212, Predicted membrane protein Function unknown 86606896 Common - hypothetical protein CYA_2259 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 86606058 Common - hypothetical protein CYA_1388 9 None None None 86606565 Common - carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein CYA_1919 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 86606241 Common - GTP-binding protein CYA_1577 222 COG2262 HflX, GTPases General function prediction only 86606272 Common ccmK-1 carbon dioxide concentrating mechanism protein CcmK CYA_1611 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 86606615 Common - hydrolase, alpha/beta fold family CYA_1971 150 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 86605945 Common - hypothetical protein CYA_1263 10 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 86607241 Common hisB imidazoleglycerol-phosphate dehydratase CYA_2626 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 86606406 Common - hypothetical protein CYA_1751 9 COG1563 COG1563, Predicted subunit of the Multisubunit Na+/H+ antiporter Inorganic ion transport and metabolism 86605034 Common - ATPase, AAA family CYA_0313 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 86607350 Nonpathogen - hypothetical protein CYA_2747 1 None None None 86605236 Common - dehydrogenase E1 component, alpha subunit CYA_0519 157 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 86605653 Common - peroxisomal fatty acyl CoA ABC transporter (P-FAT) family, transmembrane ATP-binding protein CYA_0951 249 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 86605445 Nonpathogen cse2 CRISPR-associated protein, Cse2 family CYA_0733 9 None None None 86606810 Common - peptidase, M50B family CYA_2170 45 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 86604761 Common - putative mannose-6-phosphate isomerase CYA_0028 121 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 86605641 Common - penicillin-binding protein CYA_0939 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 86607184 Common - hypothetical protein CYA_2565 10 None None None 86605904 Common era GTP-binding protein Era CYA_1220 216 COG1159 Era, GTPase General function prediction only 86605453 Nonpathogen - putative lipoprotein CYA_0743 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 86605183 Common sfsA sugar fermentation stimulation protein CYA_0465 108 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 86605972 Common - ISSoc4, transposase orfA CYA_1291 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86605593 Common ntrD-2 nitrate ABC transporter, ATP-binding protein NtrD CYA_0891 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 86604768 Common psaI photosystem I reaction center subunit VIII CYA_0036 5 None None None 86607081 Nonpathogen - hypothetical protein CYA_2459 1 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 86606268 Common - hypothetical protein CYA_1607 10 None None None 86606441 Common - hypothetical protein CYA_1787 10 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 86605944 Common - hypothetical protein CYA_1262 5 COG1503 eRF1, Peptide chain release factor 1 (eRF1) Translation, ribosomal structure and biogenesis 86606463 Common - hypothetical protein CYA_1810 48 COG1615 COG1615, Uncharacterized conserved protein Function unknown 86606893 Common - radical SAM domain protein CYA_2256 59 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 86606187 Common - hypothetical protein CYA_1522 12 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 86607468 Nonpathogen - hypothetical protein CYA_2868 10 None None None 86605564 Common - conserved hypothetical protein TIGR00044 CYA_0860 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 86607167 Nonpathogen - CRISPR-associated protein, TM1812 family CYA_2548 16 None None None 86606475 Common nifH nitrogenase iron protein CYA_1824 70 COG1348 NifH, Nitrogenase subunit NifH (ATPase) Inorganic ion transport and metabolism 86607464 Common - hypothetical protein CYA_2864 4 None None None 86604977 Common - sensory box histidine kinase CYA_0253 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 86605055 Common radA DNA repair protein RadA CYA_0335 218 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 86605536 Nonpathogen - hypothetical protein CYA_0832 1 None None None 86604779 Common - PBS lyase HEAT-like repeat protein CYA_0047 39 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 86606345 Common - dolichyl-phosphate-mannose-protein mannosyltransferase CYA_1689 44 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 86605392 Common - hypothetical protein CYA_0680 139 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 86604943 Nonpathogen - hypothetical protein CYA_0219 1 None None None 86605711 Common - macrocin-O-methyltransferase domain protein CYA_1012 25 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 86606872 Nonpathogen - hypothetical protein CYA_2234 3 None None None 86605481 Nonpathogen - hypothetical protein CYA_0774 2 None None None 86606482 Common dpsA nutrient-stress induced DNA binding protein CYA_1831 48 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 86604871 Common - CAB/ELIP/HLIP family protein CYA_0142 10 None None None 86605527 Common rnhB ribonuclease HII CYA_0822 205 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 86605514 Common - ISSoc2, resolvase CYA_0808 24 COG2452 COG2452, Predicted site-specific integrase-resolvase DNA replication, recombination, and repair 86604891 Common - hypothetical protein CYA_0162 10 None None None 86605044 Common - cyclic nucleotide-binding protein, trunction CYA_0323 29 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 86605102 Nonpathogen - hypothetical protein CYA_0382 1 None None None 86607299 Nonpathogen - hypothetical protein CYA_2689 1 None None None 86605757 Common - HupE/UreJ family protein CYA_1062 48 COG2370 HupE, Hydrogenase/urease accessory protein Posttranslational modification, protein turnover, chaperones 86605068 Common - HAD hydrolase, IIB family CYA_0348 128 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 86607490 Common - putative rod shape-determining protein RodA CYA_2890 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 86606708 Nonpathogen - hypothetical protein CYA_2068 1 None None None 86607417 Common - proton transporter, MotA/TolQ/ExbB proton channel family CYA_2815 151 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 86606500 Common psbA-4 photosystem II protein D1 CYA_1849 15 None None None 86605421 Common ahcY S-adenosyl-L-homocysteine hydrolase CYA_0709 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 86606679 Nonpathogen - hypothetical protein CYA_2039 1 COG1422 COG1422, Predicted membrane protein Function unknown 86606509 Common potA spermidine/putrescine ABC transporter, ATP-binding protein CYA_1859 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 86607007 Common - site-specific recombinase, resolvase family CYA_2381 15 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 86605778 Common nrdR hypothetical protein CYA_1083 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 86606416 Common - drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein CYA_1762 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 86605815 Common - ISSoc4, transposase orfA CYA_1126 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 86606929 Common - antibiotic biosynthesis monooxygenase domain protein CYA_2294 5 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 86607369 Nonpathogen - putative lipoprotein CYA_2766 1 None None None