Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305, complete genome NC_007350 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 73662390 Common - primosomal protein DnaI SSP1081 39 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 73663686 Common - putative small-conductance mechanosensitive channel SSP2377 125 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 73663514 Common - 2-amino-3-ketobutyrate coenzyme A ligase SSP2205 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 73661722 Common - putative truncated 2 deoxy-D-gluconate 3-dehydrogenase SSP0413 3 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73662997 Common - ABC-type spermidine putrescine transport system permease component II SSP1688 137 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 73662414 Common - putative DNA repair protein SSP1105 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 73661978 Common rpsC 30S ribosomal protein S3 SSP0669 247 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 73663170 Common - putative Iron-regulated ABC transporter ATPase component SSP1861 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 73661719 Common - gluconate operon transcriptional repressor SSP0410 115 COG1802 GntR, Transcriptional regulators Transcription 73663446 Pathogen - hypothetical protein SSP2137 1 None None None 73662986 Common - hypothetical protein SSP1677 7 COG4838 COG4838, Uncharacterized protein conserved in bacteria Function unknown 73661513 Common - teichoic acid biosynthesis protein SSP0204 152 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 73661539 Common - L-lactate permease SSP0230 105 COG1620 LldP, L-lactate permease Energy production and conversion 73662308 Common - proline dehydrogenase SSP0999 130 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 73661865 Common - isopentenyl pyrophosphate isomerase SSP0556 87 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 73662818 Common - ribosome recycling factor SSP1509 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 73661618 Pathogen - hypothetical protein SSP0309 1 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 73663125 Common - glycerophosphoryl diester phosphodiesterase SSP1816 165 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 73662489 Common - hypothetical protein SSP1180 200 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 73662659 Common - diaminopimelate decarboxylase SSP1350 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 73662604 Common recU Holliday junction-specific endonuclease SSP1295 17 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 73662712 Common - DNA topoisomerase IV subunit A SSP1403 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 73662225 Common - hypothetical protein SSP0916 7 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 73662829 Common - succinyl-CoA synthetase subunit alpha SSP1520 214 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 73663549 Common - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase SSP2240 203 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 73661331 Common - two-component sensor histidine kinase SSP0022 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 73662316 Common - hypothetical protein SSP1007 84 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 73662145 Common - sucrose operon repressor SSP0836 126 COG1609 PurR, Transcriptional regulators Transcription 73662673 Common - ABC-type phosphate transport system ATPase component SSP1364 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 73662138 Common - O-sialoglycoprotein endopeptidase SSP0829 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 73663424 Common - putative phosphohydrolase SSP2115 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 73662950 Common - transposase IS431 SSP1641 45 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 73663072 Common - putative serine protease SSP1763 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 73661853 Common - hypothetical protein SSP0544 66 COG1434 COG1434, Uncharacterized conserved protein Function unknown 73661345 Common - cassette chromosome recombinase A SSP0036 105 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 73663208 Common - putative truncated hydrolase SSP1899 28 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 73663436 Common - hypothetical protein SSP2127 40 COG2966 COG2966, Uncharacterized conserved protein Function unknown 73663590 Common - putative glycosyl hydrolase SSP2281 171 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 73662033 Common - phosphoglucosamine-mutase SSP0724 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 73663519 Common rpsL 30S ribosomal protein S12 SSP2210 238 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 73662811 Common nusA transcription elongation factor NusA SSP1502 220 COG0195 NusA, Transcription elongation factor Transcription 73662157 Common groEL chaperonin GroEL SSP0848 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 73663431 Common - mevalonate kinase SSP2122 77 COG1577 ERG12, Mevalonate kinase Lipid metabolism 73663116 Common - hypothetical protein SSP1807 54 COG2311 COG2311, Predicted membrane protein Function unknown 73663201 Common - putative lactoylglutathione lyase SSP1892 33 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73663145 Common - hypothetical protein SSP1836 4 COG4844 COG4844, Uncharacterized protein conserved in bacteria Function unknown 73663232 Common - ATP-dependent Clp protease proteolytic subunit SSP1923 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 73662545 Common - truncated phosphotransacetylase SSP1236 63 COG0280 Pta, Phosphotransacetylase Energy production and conversion 73661349 Common - hypothetical protein SSP0040 10 None None None 73662681 Common - putative intracellular protease amidase SSP1372 94 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 73663056 Common - putative hydrolase SSP1747 89 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 73662957 Common - succinate dehydrogenase cytochrome b subunit SSP1648 32 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 73663186 Common - putative H+ citrate symporter SSP1877 35 COG2851 CitM, H+/citrate symporter Energy production and conversion 73663142 Common - putative leucyl aminopeptidase SSP1833 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 73662515 Common - putative 5-formyltetrahydrofolate cyclo-ligase SSP1206 85 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 73661496 Common - 4-aminobutyrate aminotransferase SSP0187 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 73663177 Common - hypothetical protein SSP1868 8 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 73661321 Common - putative homoserine-o-acetyltransferase SSP0012 125 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 73661726 Pathogen - hypothetical protein SSP0417 1 None None None 73662478 Common - putative dCMP deaminase SSP1169 96 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 73662200 Common - glutamyl-tRNAGln amidotransferase subunit A SSP0891 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 73661739 Common hisG ATP phosphoribosyltransferase catalytic subunit SSP0430 202 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 73662536 Common - biotin carboxyl carrier protein of acetyl-CoA carboxylase SSP1227 174 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 73662425 Common - hypothetical protein SSP1116 14 COG4492 PheB, ACT domain-containing protein General function prediction only 73663229 Pathogen - hypothetical protein SSP1920 1 None None None 73661902 Common - putative transcriptional regulator SSP0593 93 COG1737 RpiR, Transcriptional regulators Transcription 73661816 Common - putative truncated proton sodium-glutamate symport protein SSP0507 4 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 73662105 Common - hypothetical protein SSP0796 108 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 73662937 Common - truncated transcriptional regulator SSP1628 111 COG1733 COG1733, Predicted transcriptional regulators Transcription 73662578 Common - cytidylate kinase SSP1269 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 73661559 Common - putative transcriptional regulator SSP0250 64 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 73662871 Common - guanylate kinase SSP1562 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 73663315 Common - putative para-aminobenzoate synthase component SSP2006 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 73662322 Common - D-alanine aminotransferase SSP1013 190 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 73661629 Common - putative truncated permease of the major facilitator superfamily SSP0320 114 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 73663612 Common - putative carboxylesterase SSP2303 16 COG1647 COG1647, Esterase/lipase General function prediction only 73661821 Common - PTS system sucrose-specific IIBC component SSP0512 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73661703 Common - putative amidase related to nicotinamidase SSP0394 100 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 73663725 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SSP2416 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 73663637 Pathogen - hypothetical protein SSP2328 1 COG5022 COG5022, Myosin heavy chain Cytoskeleton 73661565 Common - putative transcriptional regulator SSP0256 78 COG1309 AcrR, Transcriptional regulator Transcription 73662440 Common - hypothetical protein SSP1131 220 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 73663346 Pathogen - hypothetical protein SSP2037 1 None None None 73661395 Common - putative truncated permease of the major facilitator superfamily SSP0086 40 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662271 Common - ABC-type multidrug transport system ATPase component SSP0962 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73662661 Common - putative peptidase SSP1352 170 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 73662901 Common - putative methyltransferase SSP1592 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 73662417 Pathogen - hypothetical protein SSP1108 1 None None None 73661662 Common - 4-aminobutyrate aminotransferase SSP0353 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 73662380 Common - methylcitrate synthase SSP1071 194 COG0372 GltA, Citrate synthase Energy production and conversion 73663597 Common - putative ammonium transporter SSP2288 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 73663281 Common - hypothetical protein SSP1972 17 COG3610 COG3610, Uncharacterized conserved protein Function unknown 73662720 Common - putative exonuclease SSP1411 169 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 73662205 Common - putative nucleotidyltransferase DNA polymerase involved in DNA repair SSP0896 184 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 73661467 Common - truncated biofilm-associated surface protein SSP0158 7 None None None 73662045 Common - putative repressor protein SSP0736 146 COG0640 ArsR, Predicted transcriptional regulators Transcription 73662066 Common - DNA-directed RNA polymerase subunit delta SSP0757 14 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 73663286 Pathogen - hypothetical protein SSP1977 2 COG2320 GrpB, Uncharacterized conserved protein Function unknown 73663335 Pathogen - hypothetical protein SSP2026 1 None None None 73662841 Common - signal recognition particle SSP1532 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 73662668 Common - ATPase component of ABC transporter with duplicated ATPase domains SSP1359 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 73662886 Common - glyoxalase family protein SSP1577 39 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 73663374 Common - putative lipase SSP2065 122 COG0657 Aes, Esterase/lipase Lipid metabolism 73663310 Common - putative sulfatase SSP2001 57 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 73662916 Pathogen - hypothetical protein SSP1607 1 None None None 73662463 Common - putative allophanate hydrolase subunit 2 SSP1154 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 73661746 Common - putative peptidase SSP0437 91 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 73662220 Pathogen - hypothetical protein SSP0911 1 None None None 73662310 Common - L-lactate dehydrogenase SSP1001 178 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 73662787 Pathogen - hypothetical protein SSP1478 1 None None None 73663029 Common - phosphoribosylpyrophosphate amidotransferase SSP1720 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 73663679 Pathogen - hypothetical protein SSP2370 1 None None None 73662077 Common - putative translation factor SSP0768 241 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 73661699 Common - putative transcriptional regulator SSP0390 131 COG1846 MarR, Transcriptional regulators Transcription 73661683 Common - putative ROK family protein SSP0374 126 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 73661404 Common - putative acetyltransferase SSP0095 64 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 73662092 Common - hypothetical protein SSP0783 6 COG4836 COG4836, Predicted membrane protein Function unknown 73662492 Common - hypothetical protein SSP1183 18 COG4864 COG4864, Uncharacterized protein conserved in bacteria Function unknown 73663254 Common - hypothetical protein SSP1945 2 None None None 73661584 Common - putative glyoxalase SSP0275 30 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 73662839 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase SSP1530 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73662801 Common rpsO 30S ribosomal protein S15 SSP1492 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 73663239 Pathogen - hypothetical protein SSP1930 1 None None None 73661483 Common - hypothetical protein SSP0174 64 COG1641 COG1641, Uncharacterized conserved protein Function unknown 73661982 Common rplN 50S ribosomal protein L14 SSP0673 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 73661532 Common - putative acetylglutamate kinase SSP0223 216 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 73661770 Common - antiholin-like protein LrgB SSP0461 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 73662239 Common - putative peroxiredoxin SSP0930 227 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 73663414 Pathogen - hypothetical protein SSP2105 1 None None None 73663245 Pathogen - hypothetical protein SSP1936 1 None None None 73663308 Common - putative ATPase component of ABC transporter with duplicated ATPase domains SSP1999 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 73662399 Common clpX ATP-dependent protease ATP-binding subunit SSP1090 209 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 73663099 Common - ABC-type dipeptide oligopeptide nickel transport system periplasmic component SSP1790 193 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 73663712 Common - hypothetical protein SSP2403 101 COG0730 COG0730, Predicted permeases General function prediction only 73663105 Common - putative permease of the major facilitator superfamily SSP1796 60 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 73661777 Common - hypothetical protein SSP0468 28 COG3819 COG3819, Predicted membrane protein Function unknown 73661524 Common - putative ABC transporter ATP-binding protein SSP0215 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73662252 Pathogen - hypothetical protein SSP0943 1 None None None 73663491 Common - hypothetical protein SSP2182 233 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 73662195 Common - ATP-dependent DNA helicase SSP0886 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 73663503 Common - putative nucleoside-diphosphate-sugar epimerase SSP2194 99 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 73661383 Common - hypothetical protein SSP0074 49 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 73662468 Common - 5'-methylthioadenosine S-adenosylhomocysteine nucleosidase SSP1159 93 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 73663635 Pathogen - hypothetical protein SSP2326 1 None None None 73662696 Common - prephenate dehydrogenase SSP1387 155 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 73661362 Common - putative type I restriction-modification system methyltransferase subunit SSP0053 159 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 73663016 Common - phosphoenolpyruvate-protein phosphotransferase SSP1707 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 73663042 Common - quinol oxidase polypeptide IV SSP1733 55 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 73662401 Common hemA glutamyl-tRNA reductase SSP1092 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 73661674 Common - putative sugar kinase SSP0365 185 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 73661966 Common - putative glucose uptake protein SSP0657 13 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 73661850 Common - response regulator SSP0541 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 73662777 Common - putative 2-methylthioadenine synthetase SSP1468 234 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 73662798 Common - putative DNA translocase SSP1489 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 73663471 Pathogen - hypothetical protein SSP2162 1 None None None 73662762 Common - hypothetical protein SSP1453 30 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 73663302 Common - hypothetical protein SSP1993 104 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 73663714 Common - hypothetical protein SSP2405 82 COG2138 COG2138, Uncharacterized conserved protein Function unknown 73663478 Pathogen - hypothetical protein SSP2169 1 None None None 73661780 Common - pyrrolidone-carboxylate peptidase SSP0471 53 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 73661928 Common - putative ABC-type amino acid transport system permease component SSP0619 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 73663644 Common - hypothetical protein SSP2335 2 None None None 73662019 Common - putative ABC-type cobalamin Fe3+-siderophores transport system permease component SSP0710 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 73662057 Common - pyrimidine-nucleoside phosphorylase SSP0748 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 73663452 Pathogen - hypothetical protein SSP2143 1 None None None 73662099 Common - phosphomethylpyrimidine kinase SSP0790 221 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 73661876 Common - hypothetical protein SSP0567 79 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 73662122 Common - truncated RNA polymerase sigma-B factor SSP0813 3 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 73662768 Common - aerobic glycerol-3-phosphate dehydrogenase SSP1459 148 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 73663290 Common - putative ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP1981 79 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 73661844 Pathogen - putative lipoprotein SSP0535 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73661883 Common - putative sulfate permease SSP0574 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 73662393 Common infC translation initiation factor IF-3 SSP1084 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 73663079 Common - putative RNA ligase SSP1770 9 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 73662524 Common - putative competence protein SSP1215 3 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 73662561 Common - putative oxidoreductase SSP1252 203 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 73663417 Common - putative hydrolase SSP2108 117 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 73661575 Common - hypothetical protein SSP0266 20 COG4413 Utp, Urea transporter Amino acid transport and metabolism 73662050 Common - hypothetical protein SSP0741 119 COG2855 COG2855, Predicted membrane protein Function unknown 73662022 Common - heme-degrading monooxygenase IsdG SSP0713 5 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 73662325 Common - putative Zn-dependent hydrolase SSP1016 79 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 73662794 Common - putative short chain dehydrogenase SSP1485 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73662932 Common - alcohol dehydrogenase SSP1623 204 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 162319807 Common - hypothetical protein SSP1618 61 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 73661797 Pathogen - hypothetical protein SSP0488 1 None None None 73661975 Common rplB 50S ribosomal protein L2 SSP0666 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 73661478 Pathogen - hypothetical protein SSP0169 1 None None None 73663570 Common - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase SSP2261 203 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 73662303 Common - hypothetical protein SSP0994 28 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 73662080 Common - serine hydroxymethyltransferase SSP0771 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 73662131 Common - ketol-acid reductoisomerase SSP0822 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 73663542 Common - hypothetical protein SSP2233 18 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 73661859 Common - putative permease of the major facilitator superfamily SSP0550 211 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73661916 Common - putative SMR-type multidrug efflux transporter SSP0607 101 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 73662595 Common - putative glycosyltransferase SSP1286 222 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 73662450 Common - hypothetical protein SSP1141 132 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 73663575 Common - methionyl-tRNA synthetase SSP2266 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663506 Pathogen - hypothetical protein SSP2197 1 None None None 73662490 Common rpsU 30S ribosomal protein S21 SSP1181 101 None None None 73662726 Common - hypothetical protein SSP1417 15 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 73661311 Common - DNA polymerase III subunit beta SSP0002 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 73661923 Common - putative oxidoreductase SSP0614 89 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73662616 Common - hypothetical protein SSP1307 105 COG1738 COG1738, Uncharacterized conserved protein Function unknown 73661957 Common - putative transcriptional regulator SSP0648 20 COG1846 MarR, Transcriptional regulators Transcription 73663603 Common - putative acetyltransferase SSP2294 43 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73661592 Common - putative transcriptional regulator SSP0283 23 COG1309 AcrR, Transcriptional regulator Transcription 73661316 Common - hypothetical protein SSP0007 203 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 73663567 Common - regulatory protein SpoVG SSP2258 24 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 73662286 Common - hypothetical protein SSP0977 3 None None None 73661563 Common - putative truncated sugar phosphate permease SSP0254 7 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662717 Common - aconitate hydratase SSP1408 222 COG1048 AcnA, Aconitase A Energy production and conversion 73663558 Common - putative cell-division initiation protein SSP2249 2 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 73662576 Common - putative thioredoxin reductase SSP1267 183 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 73662551 Common - hypothetical protein SSP1242 9 COG4129 COG4129, Predicted membrane protein Function unknown 73662447 Common - putative truncated ABC-type transport system ATPase component SSP1138 248 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 73662432 Common - putative single-strand DNA-specific exonuclease SSP1123 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 73663621 Common - cold shock protein SSP2312 182 COG1278 CspC, Cold shock proteins Transcription 73662770 Common - glycerol uptake facilitator SSP1461 134 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 73663288 Common - hypothetical protein SSP1979 14 COG4357 COG4357, Uncharacterized conserved protein Function unknown 73663707 Common - putative adenosine deaminase SSP2398 111 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 73661435 Common - putative arginase SSP0126 19 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 73663092 Common - hypothetical protein SSP1783 9 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 73661364 Pathogen - hypothetical protein SSP0055 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73662531 Common - putative lipoate protein ligase SSP1222 87 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 73663536 Common - serine acetyltransferase SSP2227 201 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 73662646 Common - putative ABC transporter permease protein SSP1337 3 None None None 73661789 Common - hypothetical protein SSP0480 8 COG2246 COG2246, Predicted membrane protein Function unknown 73661806 Common - putative truncated Beta-glucosidase SSP0497 34 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 73663261 Common - hypothetical protein SSP1952 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 73663327 Common - fructose 1-phosphate kinase SSP2018 109 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 73663297 Common - putative permease SSP1988 84 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 73663176 Common - putative thioredoxin SSP1867 7 None None None 73662908 Common - putative glycosyltransferase SSP1599 173 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73662637 Common - transporter LysE family SSP1328 35 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 73662000 Common - putative ABC transporter ATP-binding protein SSP0691 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 73662277 Common - hypothetical protein SSP0968 14 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 73662830 Common sucC succinyl-CoA synthetase subunit beta SSP1521 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 73661441 Common - transcriptional regulator SSP0132 27 COG1309 AcrR, Transcriptional regulator Transcription 73661322 Common - hypothetical protein SSP0013 5 COG4241 COG4241, Predicted membrane protein Function unknown 73662822 Common - transcriptional repressor CodY SSP1513 20 COG4465 CodY, Pleiotropic transcriptional repressor Transcription 73662234 Common - putative A G-specific DNA glycosylase SSP0925 220 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 73663498 Common - putative gluconate transporter SSP2189 81 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 73662150 Pathogen - AgrD SSP0841 1 None None None 73662419 Common - putative cell-shape determining protein SSP1110 140 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 73661692 Common - putative glyoxalase bleomycin resistance protein SSP0383 43 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 73663268 Common - excinuclease ABC subunit B SSP1959 234 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 73663207 Pathogen - hypothetical protein SSP1898 1 None None None 73661411 Common - transcriptional regulator SSP0102 123 COG1733 COG1733, Predicted transcriptional regulators Transcription 73662178 Common - hypothetical protein SSP0869 55 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 73661748 Common - glutamate synthase SSP0439 202 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 73663672 Common - hypothetical protein SSP2363 4 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 73661656 Pathogen - hypothetical protein SSP0347 1 None None None 73663062 Pathogen - hypothetical protein SSP1753 1 None None None 73661462 Common - 2-dehydropantoate 2-reductase SSP0153 102 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 73663107 Common - 3-oxoacyl-(acyl carrier protein) synthase III SSP1798 226 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 73661485 Common - ATP-utilizing enzyme of the PP-loop superfamily SSP0176 65 COG1606 COG1606, ATP-utilizing enzymes of the PP-loop superfamily General function prediction only 73663561 Common - putative polysaccharide biosynthesis protein SSP2252 37 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 73663212 Common - hypothetical protein SSP1903 79 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73662459 Common - uridine kinase SSP1150 79 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 73661841 Common - putative permease of the major facilitator superfamily SSP0532 187 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662029 Common - putative ATPase involved in chromosome partitioning SSP0720 234 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 73663273 Common - putative ribosome-associated protein Y SSP1964 154 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 73662487 Common - chaperone protein dnaJ SSP1178 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 73663521 Common - DNA-directed RNA polymerase subunit beta' SSP2212 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 73662574 Common - putative ATP-dependent DNA helicase SSP1265 236 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 73663184 Common - hypothetical protein SSP1875 8 None None None 73661837 Common - hypothetical protein SSP0528 9 None None None 73663007 Common def peptide deformylase SSP1698 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 73663626 Pathogen - hypothetical protein SSP2317 1 None None None 73662978 Common - hypothetical protein SSP1669 7 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 73661959 Pathogen - hypothetical protein SSP0650 1 None None None 73663659 Common - hypothetical protein SSP2350 14 COG3832 COG3832, Uncharacterized conserved protein Function unknown 73663368 Common - putative phosphate transport protein SSP2059 167 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 73662379 Common - D-serine D-alanine glycine transporter SSP1070 156 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 73661663 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SSP0354 175 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 73662375 Common - acetyl-CoA carboxylase subunit beta SSP1066 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 73662007 Common - putative oxidoreductase SSP0698 103 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73662740 Common - truncated transposase SSP1431 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 73663222 Common - phosphoglyceromutase SSP1913 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 73662476 Common - putative methyltransferase SSP1167 72 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 73663181 Common - putative nitroreductase SSP1872 50 COG0778 NfnB, Nitroreductase Energy production and conversion 73662971 Common - hypothetical protein SSP1662 27 COG1323 COG1323, Predicted nucleotidyltransferase General function prediction only 73662861 Common - putative protein kinase SSP1552 156 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 73662896 Common - cell division septal protein SSP1587 19 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 73662438 Common aspS aspartyl-tRNA synthetase SSP1129 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73662943 Common - putative alcohol dehydrogenase SSP1634 216 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 73661390 Common - malate:quinone oxidoreductase SSP0081 58 COG0579 COG0579, Predicted dehydrogenase General function prediction only 73662804 Common rbfA ribosome-binding factor A SSP1495 198 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 73661892 Common - PTS system arbutin-like IIBC component SSP0583 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73663354 Pathogen - putative acetyltransferase SSP2045 2 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 73661455 Common - putative choloylglycine hydrolase SSP0146 42 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 73662266 Common - putative HD-superfamily hydrolase SSP0957 45 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 73663660 Common - hypothetical protein SSP2351 7 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 73662127 Common - 3-isopropylmalate dehydratase small subunit SSP0818 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 73663243 Pathogen - hypothetical protein SSP1934 1 None None None 73662173 Common - hypothetical protein SSP0864 11 COG4709 COG4709, Predicted membrane protein Function unknown 73662404 Common - uroporphyrinogen III synthase SSP1095 66 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 73662730 Common rpsN 30S ribosomal protein S14 SSP1421 212 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 73662181 Common - putative manganese-dependent inorganic pyrophosphatase SSP0872 59 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 73661877 Common - putative ribose 5-phosphate isomerase SSP0568 164 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 73661752 Common - putative transporter SSP0443 188 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662243 Pathogen - truncated aspartate 1-decarboxylase precursor SSP0934 1 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 73662853 Common - putative L-serine deaminase alpha subunit SSP1544 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 73663458 Common - putative glucosamine-6-phosphate isomerase SSP2149 85 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 73661555 Common - 2-dehydropantoate 2-reductase SSP0246 90 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 73661635 Common - 3-hydroxy-3-methylglutaryl-coenzyme A reductase SSP0326 45 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 73661640 Common - holin-like protein SSP0331 30 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 73661647 Common - D-cysteine desulfhydrase SSP0338 78 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 73662701 Common - ribose ABC transporter SSP1392 117 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 73661427 Common - hypothetical protein SSP0118 2 None None None 73663197 Pathogen - hypothetical protein SSP1888 1 None None None 73662257 Common - putative proton glutamate symporter SSP0948 162 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 73662749 Pathogen - hypothetical protein SSP1440 1 None None None 73663486 Common - hypothetical protein SSP2177 8 COG3832 COG3832, Uncharacterized conserved protein Function unknown 73662508 Common - endonuclease IV SSP1199 106 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 73663734 Common - putative acyl-CoA dehydrogenase SSP2425 155 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 73661893 Pathogen - hypothetical protein SSP0584 1 None None None 73663407 Pathogen - hypothetical protein SSP2098 1 None None None 73662929 Common - putative transcriptional regulator SSP1620 133 COG1733 COG1733, Predicted transcriptional regulators Transcription 73663216 Common - exoribonuclease SSP1907 203 COG0557 VacB, Exoribonuclease R Transcription 73662922 Pathogen - hypothetical protein SSP1613 1 None None None 73662024 Common - hypothetical protein SSP0715 36 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 73663143 Common - putative NADH dehydrogenase FAD-containing subunit SSP1834 195 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 73662079 Common - hypothetical protein SSP0770 16 COG4475 COG4475, Uncharacterized protein conserved in bacteria Function unknown 73661603 Common - putative aminotransferase SSP0294 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 73661569 Common - urease accessory protein ureG SSP0260 151 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 73663438 Common - putative permease of the major facilitator superfamily SSP2129 181 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662894 Common - cell division protein FtsZ SSP1585 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 73663090 Common - hypothetical protein SSP1781 9 COG4116 COG4116, Uncharacterized protein conserved in bacteria Function unknown 73662517 Pathogen - hypothetical protein SSP1208 1 COG4483 COG4483, Uncharacterized protein conserved in bacteria Function unknown 73662248 Common - putative iron-sulphur protein SSP0939 137 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 73662155 Common - hypothetical protein SSP0846 8 None None None 73661402 Common - hypothetical protein SSP0093 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 73661453 Common - anaerobic ribonucleoside triphosphate reductase SSP0144 97 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 73663140 Common - hypothetical protein SSP1831 84 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 73663372 Common - hypothetical protein SSP2063 5 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 73661339 Common - putative replication protein RepA SSP0030 10 COG5527 COG5527, Protein involved in initiation of plasmid replication DNA replication, recombination, and repair 73662070 Common - putative transcriptional regulator SSP0761 97 COG1733 COG1733, Predicted transcriptional regulators Transcription 73662855 Common - hypothetical protein SSP1546 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 73663234 Common - hypothetical protein SSP1925 6 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73662148 Common - accessory gene regulator A SSP0839 24 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 73661347 Common - hypothetical protein SSP0038 24 COG5519 COG5519, Superfamily II helicase and inactivated derivatives DNA replication, recombination, and repair 73663058 Common - putative menaquinone-specific isochorismate synthase SSP1749 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73661343 Pathogen - hypothetical protein SSP0034 1 None None None 73662362 Common - putative adenine-specific DNA methylase SSP1053 13 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 73661312 Common - hypothetical protein SSP0003 28 COG2501 COG2501, Uncharacterized conserved protein Function unknown 73663114 Common - hypothetical protein SSP1805 3 None None None 73662216 Common - hypothetical protein SSP0907 8 COG4758 COG4758, Predicted membrane protein Function unknown 73661996 Common rpsM 30S ribosomal protein S13 SSP0687 248 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 73663531 Common - putative RNA polymerase sigma factor SSP2222 13 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 73662124 Common - putative RNA binding protein SSP0815 145 COG2183 Tex, Transcriptional accessory protein Transcription 73661944 Common - putative metal-dependent hydrolase SSP0635 5 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 73662538 Common - hypothetical protein SSP1229 30 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 73661961 Common - putative cation multidrug efflux pump SSP0652 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 73661633 Common - 3-hydroxy-3-methylglutaryl CoA synthase SSP0324 76 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 73663161 Common - putative permease SSP1852 41 COG0730 COG0730, Predicted permeases General function prediction only 73663386 Common - penicillin binding protein 4 SSP2077 145 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 73663210 Common - hypothetical protein SSP1901 14 None None None 73661611 Common - hypothetical protein SSP0302 3 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 73662193 Common - putative D-alanyl-D-alanine carboxypeptidase SSP0884 39 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 73661870 Common - putative 3-methylpurine glycosylase SSP0561 78 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 73663038 Common - hypothetical protein SSP1729 9 None None None 73661332 Common - hypothetical protein SSP0023 7 COG4863 COG4863, Uncharacterized protein conserved in bacteria Function unknown 73662995 Pathogen - hypothetical protein SSP1686 1 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 73663129 Common - putative S1 RNA binding domain protein SSP1820 214 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 73663020 Pathogen - hypothetical protein SSP1711 1 None None None 73663123 Common - argininosuccinate synthase SSP1814 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 73661571 Common ureE urease accessory protein UreE SSP0262 45 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 73661717 Common - putative truncated transcriptional regulator SSP0408 4 COG0789 SoxR, Predicted transcriptional regulators Transcription 73662550 Common - hypothetical protein SSP1241 11 None None None 73663723 Common - cystathionine beta-lyase cystathionine gamma-synthase SSP2414 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 73663664 Common - transcriptional regulator SSP2355 104 COG1522 Lrp, Transcriptional regulators Transcription 73662991 Common - inositol monophosphatase family protein SSP1682 207 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 73662714 Common - hypothetical protein SSP1405 170 COG0344 COG0344, Predicted membrane protein Function unknown 73661936 Common - formate dehydrogenase accessory protein SSP0627 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 73661828 Common - putative oxidoreductase SSP0519 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73662606 Common - hypothetical protein SSP1297 11 COG4474 COG4474, Uncharacterized protein conserved in bacteria Function unknown 73663591 Common - phosphotransferase system trehalose-specific enzyme IIBC component SSP2282 43 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73661879 Common - putative arginase family protein SSP0570 21 None None None 73663394 Common - putative metalloregulator SSP2085 98 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 73661863 Common - hypothetical protein SSP0554 27 COG0824 FcbC, Predicted thioesterase General function prediction only 73662761 Common - glutamine synthetase repressor SSP1452 13 COG0789 SoxR, Predicted transcriptional regulators Transcription 73662207 Common - ferritin-like protein SSP0898 84 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 73662678 Pathogen - hypothetical protein SSP1369 1 COG3247 HdeD, Uncharacterized conserved protein Function unknown 73662227 Common - putative intracellular protease amidase SSP0918 152 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 73661549 Common - phosphotransferase system cellobiose-specific component IIB SSP0240 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 73662756 Common - signal transduction histidine kinase SSP1447 124 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 73663135 Common - putative monovalent cation/H+ antiporter subunit D SSP1826 208 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 73661511 Common - hypothetical protein SSP0202 10 COG4334 COG4334, Uncharacterized protein conserved in bacteria Function unknown 73662542 Common - geranylgeranyl pyrophosphate synthase SSP1233 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 73661328 Common - putative transcriptional regulator SSP0019 2 COG1846 MarR, Transcriptional regulators Transcription 73661744 Common - putative p-aminobenzoyl-glutamate transporter SSP0435 38 COG2978 AbgT, Putative p-aminobenzoyl-glutamate transporter Coenzyme metabolism 73662614 Common - putative RNase H SSP1305 16 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 73662686 Common - anthranilate phosphoribosyltransferase SSP1377 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 73662392 Common - lysine-specific permease SSP1083 84 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 73662270 Common - HIT-family protein SSP0961 234 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 73663074 Common prfC peptide chain release factor 3 SSP1765 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 73661980 Common - 50S ribosomal protein L29 SSP0671 94 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 73662314 Common - putative permease of the major facilitator superfamily SSP1005 133 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662586 Common - nucleoside diphosphate kinase SSP1277 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 73662930 Common - putative transcriptional regulator SSP1621 171 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 73662671 Common - ABC-type phosphate transport system permease component SSP1362 226 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 73661353 Common - hypothetical protein SSP0044 13 COG3378 COG3378, Predicted ATPase General function prediction only 73661987 Common rplF 50S ribosomal protein L6 SSP0678 243 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 73662471 Common - shikimate 5-dehydrogenase SSP1162 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 73662100 Common - hydroxyethylthiazole kinase SSP0791 77 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 73662884 Common - putative pseudouridylate synthase SSP1575 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 73662844 Common - chromosome segregation SMC protein SSP1535 232 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 73661689 Common - truncated beta-glucosidase SSP0380 90 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 73662133 Common - acetolactate synthase large subunit SSP0824 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 73662579 Common rpsA 30S ribosomal protein S1 SSP1270 221 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 73662837 Common - RimM protein required for 16S rRNA processing SSP1528 187 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 73661646 Common - putative acetyltransferase SSP0337 85 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73663051 Common - putative transcriptional regulator SSP1742 15 COG1846 MarR, Transcriptional regulators Transcription 73663097 Common spxA transcriptional regulator Spx SSP1788 44 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 73662494 Common - phosphate starvation-inducible protein PhoH SSP1185 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 73661775 Common - putative peptidase SSP0466 11 COG4187 RocB, Arginine degradation protein (predicted deacylase) Amino acid transport and metabolism 73661682 Common - putative transcriptional regulator SSP0373 92 COG1737 RpiR, Transcriptional regulators Transcription 73663027 Common - phosphoribosylglycinamide formyltransferase SSP1718 228 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 73662185 Common - putative prephenate dehydratase SSP0876 211 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 73661526 Common - putative truncated gluconate transporter SSP0217 60 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 73663014 Common - cytochrome bd-type quinol oxidase subunit 1 SSP1705 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 73663155 Common - putative sugar phosphatase SSP1846 108 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 73662412 Common - hypothetical protein SSP1103 29 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 73663247 Pathogen - hypothetical protein SSP1938 1 None None None 73661971 Common rpsJ 30S ribosomal protein S10 SSP0662 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 73661738 Common - putative histidinol dehydrogenase SSP0429 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 73661885 Common - putative short chain dehydrogenase SSP0576 216 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73661904 Common murQ N-acetylmuramic acid-6-phosphate etherase SSP0595 86 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 73662323 Common - putative choline kinase SSP1014 9 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 73663311 Common - putative allophanate hydrolase subunit 2 SSP2002 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 73663317 Common - hypothetical protein SSP2008 176 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 73662423 Common rpmA 50S ribosomal protein L27 SSP1114 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 73662064 Common - pantothenate kinase SSP0755 4 COG5146 PanK, Pantothenate kinase, acetyl-CoA regulated Coenzyme metabolism 73661494 Common - putative cardiolipin synthase SSP0185 155 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 73661381 Pathogen - truncated capsular polysaccharide synthesis protein SSP0072 1 None None None 73661393 Common - putative L-lactate permease 2 SSP0084 104 COG1620 LldP, L-lactate permease Energy production and conversion 73663064 Common - putative regulatory protein SSP1755 3 COG4903 ComK, Genetic competence transcription factor Transcription 73662889 Common - hypothetical protein SSP1580 30 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 73662751 Pathogen - hypothetical protein SSP1442 1 None None None 73661705 Common - hypothetical protein SSP0396 12 COG3949 COG3949, Uncharacterized membrane protein Function unknown 73661676 Common - putative 2-haloalkanoic acid dehalogenase SSP0367 85 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 73662386 Common - putative dephospho-CoA kinase SSP1077 211 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 73662873 Common - hypothetical protein SSP1564 53 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 73661502 Common - choline transporter SSP0193 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 73661623 Common - putative regulatory protein SSP0314 105 COG3664 XynB, Beta-xylosidase Carbohydrate transport and metabolism 73662461 Pathogen - hypothetical protein SSP1152 1 None None None 73661413 Common - melibiose:sodium symporter SSP0104 79 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 73661465 Common - malate:quinone oxidoreductase SSP0156 57 COG0579 COG0579, Predicted dehydrogenase General function prediction only 73661810 Pathogen - truncated lipase precursor SSP0501 1 None None None 73662708 Common - hypothetical protein SSP1399 31 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 73662914 Common - putative transposase SSP1605 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 73662959 Common - thioredoxin SSP1650 235 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 73663337 Common - hypothetical protein SSP2028 178 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 73663283 Common - putative glycerate kinase SSP1974 80 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 73663448 Common - hypothetical protein SSP2139 36 COG4405 COG4405, Uncharacterized protein conserved in bacteria Function unknown 73663610 Pathogen - hypothetical protein SSP2301 1 None None None 73662952 Common - hypothetical protein SSP1643 36 COG0622 COG0622, Predicted phosphoesterase General function prediction only 73663309 Common - putative divalent heavy-metal cations transporter SSP2000 88 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 73662583 Pathogen - hypothetical protein SSP1274 1 None None None 73662666 Common - aspartokinase II SSP1357 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 73662320 Pathogen - hypothetical protein SSP1011 1 None None None 73662062 Common - hypothetical protein SSP0753 3 COG0439 AccC, Biotin carboxylase Lipid metabolism 73662129 Common - 3-isopropylmalate dehydrogenase SSP0820 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 73661590 Common - hypothetical protein SSP0281 55 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73661509 Common - hypothetical protein SSP0200 67 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 73663496 Pathogen - hypothetical protein SSP2187 1 None None None 73662785 Common - putative pyruvate flavodoxin ferredoxin oxidoreductase alpha subunit SSP1476 112 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 73663548 Common lysS lysyl-tRNA synthetase SSP2239 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 73662090 Common - F0F1 ATP synthase subunit beta SSP0781 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 73662599 Common asnC asparaginyl-tRNA synthetase SSP1290 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 73662533 Pathogen - hypothetical protein SSP1224 1 None None None 73662434 Common - GTP pyrophosphokinase SSP1125 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 73661318 Common - seryl-tRNA synthetase SSP0009 246 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 73661846 Common - putative L-lactate permease SSP0537 104 COG1620 LldP, L-lactate permease Energy production and conversion 73663730 Common - hypothetical protein SSP2421 3 None None None 73663601 Common - putative arylamine N-acetyltransferase SSP2292 44 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 73662449 Common - putative tRNA methyltransferase SSP1140 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 73663608 Common - putative branched-chain amino acid permease SSP2299 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 73662906 Pathogen - putative antibacterial protein SSP1597 1 None None None 73661448 Common - transcriptional regulator SSP0139 6 COG1846 MarR, Transcriptional regulators Transcription 73662213 Common - hypothetical protein SSP0904 10 COG4129 COG4129, Predicted membrane protein Function unknown 73662553 Common - 6-phosphogluconate dehydrogenase SSP1244 170 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 73663321 Common - hypothetical protein SSP2012 12 COG2261 COG2261, Predicted membrane protein Function unknown 73662832 Common rbgA ribosomal biogenesis GTPase SSP1523 185 COG1161 COG1161, Predicted GTPases General function prediction only 73662899 Common - penicillin-binding protein 1 SSP1590 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 73663328 Common - transcription repressor of fructose operon SSP2019 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 73662357 Common - putative thiamine biosynthesis ATP pyrophosphatase SSP1048 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 73663538 Common - hypothetical protein SSP2229 50 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 73662980 Common - putative truncated excinuclease ABC subunit A SSP1671 241 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 73663292 Common - putative ABC-type cobalamin Fe3+-siderophores transport system permease component SSP1983 156 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 73662275 Common hemH ferrochelatase SSP0966 109 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 73662743 Pathogen - hypothetical protein SSP1434 1 None None None 73661367 Common - hypothetical protein SSP0058 2 COG4086 COG4086, Predicted secreted protein Function unknown 73662331 Common - putative DNA segregation ATPase FtsK SpoIIIE family protein SSP1022 204 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 73662635 Common - dihydrolipoamide acetyltransferase SSP1326 197 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 73662719 Common - large-conductance mechanosensitive channel SSP1410 139 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 73661654 Common - putative transcriptional regulator SSP0345 124 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73661464 Common panC pantoate--beta-alanine ligase SSP0155 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 73663556 Common - hypothetical protein SSP2247 197 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 73662072 Common rho transcription termination factor Rho SSP0763 212 COG1158 Rho, Transcription termination factor Transcription 73663199 Pathogen - hypothetical protein SSP1890 1 None None None 73663577 Common - putative endonuclease SSP2268 90 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 73661660 Pathogen - hypothetical protein SSP0351 1 None None None 73662017 Common - putative amino acid racemase SSP0708 17 COG3457 COG3457, Predicted amino acid racemase Amino acid transport and metabolism 73663299 Common - putative di-tripeptide permease SSP1990 83 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 73662059 Common - hypothetical protein SSP0750 19 COG4270 COG4270, Predicted membrane protein Function unknown 73661476 Common - transcriptional regulator SSP0167 189 COG0583 LysR, Transcriptional regulator Transcription 73662169 Common - ABC-type multidrug transport system ATPase component SSP0860 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73663410 Common - hypothetical protein SSP2101 59 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 73662366 Common - alanine dehydrogenase SSP1057 166 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 73661423 Common - short chain dehydrogenase SSP0114 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73663304 Common - putative aminotransferase SSP1995 240 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 73662796 Common - putative peptidase SSP1487 136 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 73661678 Pathogen - putative truncated succinyl-diaminopimelate desuccinylase SSP0369 1 None None None 73662199 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C SSP0890 154 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 73663164 Common - hypothetical protein SSP1855 217 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 73662293 Pathogen - hypothetical protein SSP0984 1 None None None 73661720 Common - gluconokinase SSP0411 181 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 73663646 Common - putative phosphoglycerate mutase SSP2337 113 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 73662052 Common - hypothetical protein SSP0743 16 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 73661910 Common - putative formate dehydrogenase SSP0601 217 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 73663426 Common - hypothetical protein SSP2117 18 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 73662089 Common - F0F1 ATP synthase subunit gamma SSP0780 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 73661924 Pathogen - hypothetical protein SSP0615 1 None None None 73663650 Common - putative LysE type transporter SSP2341 83 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 73661546 Common - putative Zn-dependent alcohol dehydrogenase SSP0237 205 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 73661795 Pathogen - hypothetical protein SSP0486 1 COG4043 COG4043, Uncharacterized conserved protein Function unknown 73662116 Common - alanine racemase SSP0807 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 73662082 Common - UDP-GlcNAc 2-epimerase SSP0773 155 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 73662863 Common - hypothetical protein SSP1554 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 73663084 Common - putative cation transport protein SSP1775 64 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 73662792 Common - hypothetical protein SSP1483 43 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 73661669 Common - ABC-type cobalt transport system ATPase component SSP0360 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 73663586 Common - hypothetical protein SSP2277 57 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 73663571 Common - hypothetical protein SSP2262 18 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 73663744 Common - hypothetical protein SSP2435 3 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 73662395 Common rplT 50S ribosomal protein L20 SSP1086 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 73663476 Common - putative permease of the major facilitator superfamily SSP2167 71 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662567 Common - putative transcriptional regulator SSP1258 137 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 73661773 Common - signal transduction histidine kinase SSP0464 106 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 73663000 Common - putative transcriptional regulator SSP1691 56 COG1396 HipB, Predicted transcriptional regulators Transcription 73662525 Pathogen - hypothetical protein SSP1216 1 COG4940 ComGF, Competence protein ComGF Intracellular trafficking and secretion 73661973 Common rplD 50S ribosomal protein L4 SSP0664 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 73661370 Common - capsular polysaccharide synthesis protein SSP0061 172 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 73661919 Common - hypothetical protein SSP0610 20 COG3296 COG3296, Uncharacterized protein conserved in bacteria Function unknown 73662047 Common - putative transcriptional regulator SSP0738 144 COG2186 FadR, Transcriptional regulators Transcription 73662594 Common - putative pyrophosphatase SSP1285 25 COG1694 MazG, Predicted pyrophosphatase General function prediction only 73663508 Common - succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B SSP2199 101 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 73663711 Common sat sulfate adenylyltransferase SSP2402 64 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 73663278 Common - putative glycosyl transferase SSP1969 229 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 73662255 Common - signal transduction histidine kinase SSP0946 147 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 73662250 Pathogen - hypothetical protein SSP0941 2 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 73662698 Common - putative 4-oxalocrotonate tautomerase SSP1389 21 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 73663718 Common - 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase SSP2409 163 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 73663421 Common argS arginyl-tRNA synthetase SSP2112 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663409 Pathogen - hypothetical protein SSP2100 1 None None None 73662346 Common - PTS system N-acetylglucosamine-specific IIBC component SSP1037 53 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73663662 Common - putative Trk-type K+ transport system membrane component SSP2353 95 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 73662192 Common - hypothetical protein SSP0883 20 COG4496 COG4496, Uncharacterized protein conserved in bacteria Function unknown 73662241 Common - transcriptional regulator SSP0932 210 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 73663456 Common - putative 6-phospho-3-hexuloisomerase SSP2147 70 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 73662501 Common - hypothetical protein SSP1192 22 COG0517 COG0517, FOG: CBS domain General function prediction only 73663044 Common - ribonucleoside hydrolase RihC SSP1735 87 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 73662590 Common - hypothetical protein SSP1281 39 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 73661425 Pathogen - putative truncated intercellular adhesion protein C SSP0116 1 COG3936 COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation Carbohydrate transport and metabolism 73662431 Common - bifunctional preprotein translocase subunit SecD/SecF SSP1122 213 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 73663693 Common - putative arsenical resistance operon repressor SSP2384 105 COG0640 ArsR, Predicted transcriptional regulators Transcription 73663401 Common - putative monovalent cation/H+ antiporter subunit E SSP2092 37 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 73661690 Common - putative truncated transcription antiterminator SSP0381 21 COG3711 BglG, Transcriptional antiterminator Transcription 73663214 Common - hypothetical protein SSP1905 3 None None None 73661782 Common - truncated lipoprotein precursor SSP0473 118 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 73662407 Common - hypothetical protein SSP1098 34 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 73662920 Common - transposase IS431 SSP1611 46 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 73662691 Common - putative ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP1382 40 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 73662160 Common - putative acetyltransferase SSP0851 11 COG0456 RimI, Acetyltransferases General function prediction only 73661839 Common - putative thioredoxin reductase SSP0530 245 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 73663463 Common - hypothetical protein SSP2154 42 COG0431 COG0431, Predicted flavoprotein General function prediction only 73663684 Common - translation-associated GTPase SSP2375 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 73662268 Common - hypothetical protein SSP0959 4 None None None 73661761 Common - ABC-type proline glycine betaine transport system permease component SSP0452 168 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 73663399 Common - putative monovalent cation/H+ antiporter subunit G SSP2090 5 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 73662348 Common - D-3-phosphoglycerate dehydrogenase SSP1039 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 73663356 Common - putative sugar transport protein SSP2047 176 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663669 Common - hypothetical protein SSP2360 4 None None None 73663271 Common - peptide chain release factor 2 SSP1962 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 73661706 Common - Na+ H+ exchanger SSP0397 145 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 73661578 Common - putative ABC-type oligopeptide transport system permease component SSP0269 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 73661601 Common - putative regulatory protein SSP0292 14 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 73662457 Common - putative protease SSP1148 130 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 73662973 Common - putative N6-adenine-specific methylase SSP1664 215 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 73663205 Pathogen - hypothetical protein SSP1896 1 None None None 73662961 Common - hypothetical protein SSP1652 73 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 73662377 Common - 6-phosphofructokinase SSP1068 157 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 73663340 Common - putative cobalamin synthesis protein SSP2031 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 73662097 Common - hypothetical protein SSP0788 2 None None None 73661946 Common - putative molybdopterin synthase sulfurylase SSP0637 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 73661710 Common - putative permease of the major facilitator superfamily SSP0401 154 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 73662702 Common - ribose ABC transporter SSP1393 120 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 73663553 Common - disulfide bond chaperone of the HSP33 family SSP2244 136 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 73662319 Common - RNA pseudouridine synthase SSP1010 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 73661731 Common - ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP0422 17 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 73663523 Common - hypothetical protein SSP2214 114 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 73662373 Common - DNA polymerase III alpha chain SSP1064 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 73663361 Common - putative methionine synthase II SSP2052 46 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 73663009 Common - hypothetical protein SSP1700 10 COG5503 COG5503, Uncharacterized conserved small protein Function unknown 73663563 Common - peptidyl-tRNA hydrolase SSP2254 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 73662005 Common rpsI 30S ribosomal protein S9 SSP0696 244 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 73663100 Common - ABC-type dipeptide oligopeptide nickel transport system ATPase component SSP1791 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 73662625 Common - methionine sulfoxide reductase B SSP1316 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 73663751 Common gidB glucose-inhibited division protein B SSP2442 184 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 73661557 Common - ABC-type uncharacterized transport system periplasmic component SSP0248 101 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 73662305 Common - riboflavin synthase subunit alpha SSP0996 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 73662484 Common - Heat-inducible transcriptional repressor SSP1175 149 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 73661831 Common - hypothetical protein SSP0522 38 COG1288 COG1288, Predicted membrane protein Function unknown 73661755 Common - hypothetical protein SSP0446 11 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 73662945 Common - putative dehydrogenase SSP1636 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 73663248 Pathogen - hypothetical protein SSP1939 1 None None None 73661399 Common - hypothetical protein SSP0090 6 COG3272 COG3272, Uncharacterized conserved protein Function unknown 73661721 Common - gluconate permease SSP0412 84 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 73661908 Common - putative inositol monophosphatase family protein SSP0599 192 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 73662384 Common - DNA polymerase I SSP1075 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 73662753 Common - thermonuclease SSP1444 73 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 73661582 Common - putative transcriptional regulator SSP0273 22 COG1846 MarR, Transcriptional regulators Transcription 73663060 Common - hypothetical protein SSP1751 14 COG0456 RimI, Acetyltransferases General function prediction only 73663191 Pathogen - hypothetical protein SSP1882 1 None None None 73661366 Common - hypothetical protein SSP0057 11 COG4086 COG4086, Predicted secreted protein Function unknown 73663339 Common - putative aldo keto reductase SSP2030 183 COG4989 COG4989, Predicted oxidoreductase General function prediction only 73663616 Common - hypothetical protein SSP2307 39 COG2320 GrpB, Uncharacterized conserved protein Function unknown 73661501 Common - putative SAM-dependent methyltransferase SSP0192 189 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 73663342 Common - putative ABC-type transport system ATPase component SSP2033 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 73662870 Common - putative DNA-directed RNA polymerase subunit K omega SSP1561 10 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 73662360 Common - hypothetical protein SSP1051 16 COG1714 COG1714, Predicted membrane protein/domain Function unknown 73662933 Common - excinuclease ATPase subunit SSP1624 242 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 73661774 Common - putative permease of the major facilitator superfamily SSP0465 179 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 73661606 Common - copper-transporting ATPase SSP0297 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 73661818 Pathogen - hypothetical protein SSP0509 1 None None None 73661471 Common - hypothetical protein SSP0162 22 None None None 73663690 Common - hypothetical protein SSP2381 46 COG2966 COG2966, Uncharacterized conserved protein Function unknown 73661801 Pathogen - hypothetical protein SSP0492 1 None None None 73662324 Common - putative methyltransferase SSP1015 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 73662030 Common - arginase SSP0721 160 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 73662988 Common - hypothetical protein SSP1679 3 COG4896 COG4896, Uncharacterized protein conserved in bacteria Function unknown 73662664 Common - dihydrodipicolinate synthase SSP1355 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 73662201 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B SSP0892 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 73662467 Common - putative transporter SSP1158 24 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 73662881 Common pyrB aspartate carbamoyltransferase catalytic subunit SSP1572 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 73661709 Common - putative alkaline phosphatase SSP0400 168 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 73662041 Common - putative hydrolase SSP0732 99 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73662349 Common - putative aminotransferase SSP1040 158 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 73661493 Common - putative transporter SSP0184 90 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 73662724 Pathogen - hypothetical protein SSP1415 1 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 73661742 Common - polyphosphate kinase SSP0433 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 73663357 Common - hypothetical protein SSP2048 26 COG2839 COG2839, Uncharacterized protein conserved in bacteria Function unknown 73663314 Common - putative para-aminobenzoate synthetase component SSP2005 24 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 73662289 Common - CrcB-like protein SSP0980 182 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 73663187 Pathogen - hypothetical protein SSP1878 1 None None None 73661901 Common - alkaline phosphatase III precursor SSP0592 86 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 73661906 Pathogen - hypothetical protein SSP0597 1 None None None 73663611 Pathogen - hypothetical protein SSP2302 1 None None None 73661808 Common - putative formate nitrite family of transporter SSP0499 45 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 73663689 Common - NADH dehydrogenase subunit 5 SSP2380 204 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 73663727 Common - sulfite reductase flavoprotein subunit SSP2418 105 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 73662588 Common - 3-dehydroquinate synthase SSP1279 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 73661521 Common - hypothetical protein SSP0212 2 None None None 73661695 Common - ABC-type multidrug protein lipid transport system ATPase component SSP0386 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 73663153 Pathogen - hypothetical protein SSP1844 1 None None None 73663258 Common - hypothetical protein SSP1949 53 COG1284 COG1284, Uncharacterized conserved protein Function unknown 73661359 Pathogen - hypothetical protein SSP0050 1 None None None 73662235 Common - hypothetical protein SSP0926 15 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 73661507 Common - putative transcriptional regulator SSP0198 191 COG0583 LysR, Transcriptional regulator Transcription 73661372 Common - capsular polysaccharide biosynthesis protein SSP0063 190 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 73662388 Common - hypothetical protein SSP1079 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 73662496 Common - diacylglycerol kinase SSP1187 70 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 73663013 Common - cytochrome bd-type quinol oxidase subunit 2 SSP1704 9 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 73662329 Common - hypothetical protein SSP1020 6 COG4848 COG4848, Uncharacterized protein conserved in bacteria Function unknown 73663675 Pathogen - hypothetical protein SSP2366 1 None None None 73662627 Common - hypothetical protein SSP1318 12 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 73662297 Common - putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase SSP0988 5 COG4193 LytD, Beta- N-acetylglucosaminidase Carbohydrate transport and metabolism 73663053 Common - putative aminotransferase SSP1744 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 73663109 Common - putative ATPase subunit of an ATP-dependent protease SSP1800 222 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 73662589 Common - 3-phosphoshikimate 1-carboxyvinyltransferase SSP1280 232 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 73663180 Common - putative thioredoxin SSP1871 168 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 73661986 Common rpsH 30S ribosomal protein S8 SSP0677 248 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 73662063 Pathogen - hypothetical protein SSP0754 1 None None None 73662183 Common - hypothetical protein SSP0874 6 COG5434 PGU1, Endopygalactorunase Cell envelope biogenesis, outer membrane 73663151 Common - putative activated D-alanine transport protein SSP1842 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 73662693 Common - putative peptidase SSP1384 83 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 73663704 Common - hypothetical protein SSP2395 3 COG5609 COG5609, Uncharacterized conserved protein Function unknown 73661860 Pathogen - hypothetical protein SSP0551 1 None None None 73663031 Common - phosphoribosylformylglycinamidine synthase glutamine amidotransferase domain SSP1722 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 73663241 Pathogen - hypothetical protein SSP1932 1 None None None 73663251 Pathogen - hypothetical protein SSP1942 1 None None None 73663440 Common - putative amino acid transporter SSP2131 55 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 73662806 Pathogen - hypothetical protein SSP1497 1 None None None 73663419 Common - putative iron compound ABC transporter periplasmic component SSP2110 167 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 73663482 Common - putative amino acid permease SSP2173 175 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 73663721 Common - putative transcriptional regulator SSP2412 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 73662343 Common - tyrosyl-tRNA synthetase SSP1034 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663332 Common - fluoroquinolone resistance protein SSP2023 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662436 Common - N-acetylmuramoyl-L-alanine amidase SSP1127 176 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 73662738 Common - putative 23-cyclic-nucleotide 2-phosphodiesterase SSP1429 127 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 73663432 Common - putative lipoate-protein ligase A SSP2123 8 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 73662875 Pathogen - hypothetical protein SSP1566 1 None None None 73661620 Common - 1-pyrroline-5-carboxylate dehydrogenase SSP0311 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73663121 Common - hypothetical protein SSP1812 9 COG0398 COG0398, Uncharacterized conserved protein Function unknown 73662954 Common - glutamate racemase SSP1645 189 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 73662004 Common rplM 50S ribosomal protein L13 SSP0695 221 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 73662306 Common - riboflavin biosynthesis protein SSP0997 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 73661614 Common - hypothetical protein SSP0305 24 COG5505 COG5505, Predicted integral membrane protein Function unknown 73661784 Common - putative NhaP-type Na+ H+ and K+ H+ antiporter SSP0475 102 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 73662993 Pathogen - hypothetical protein SSP1684 1 None None None 73661420 Common - hypothetical protein SSP0111 3 None None None 73663545 Common - putative glutamine amidotransferase family protein SSP2236 86 COG0311 PDX2, Predicted glutamine amidotransferase involved in pyridoxine biosynthesis Coenzyme metabolism 73662364 Common - hypothetical protein SSP1055 25 COG4222 COG4222, Uncharacterized protein conserved in bacteria Function unknown 73662474 Common - hypothetical protein SSP1165 43 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 73662544 Common - DNA repair protein SSP1235 210 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 73661408 Common - putative truncated amidohydrolase SSP0099 97 COG0388 COG0388, Predicted amidohydrolase General function prediction only 73662912 Common - cadmium resistance protein SSP1603 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 73662485 Common - GrpE protein SSP1176 233 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 73662068 Common - fructose-bisphosphate aldolase SSP0759 179 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 73661334 Common - putative metal-dependent hydrolase SSP0025 65 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 73663279 Common - hypothetical protein SSP1970 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 73661579 Common - putative ABC-type oligopeptide transport system ATPase component SSP0270 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 73662677 Common - ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP1368 54 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 73661535 Common - putative FMN reductase NADPH-dependent SSP0226 56 COG0431 COG0431, Predicted flavoprotein General function prediction only 73663132 Common - putative monovalent cation/H+ antiporter subunit A SSP1823 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 73663133 Common - putative monovalent cation/H+ antiporter subunit B SSP1824 43 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 73662141 Common - ATPase component of ABC transporter with duplicated ATPase domains SSP0832 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 73662144 Common - hypothetical protein SSP0835 11 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 73663383 Common - hypothetical protein SSP2074 47 COG1284 COG1284, Uncharacterized conserved protein Function unknown 73662152 Common - putative amidohydrolase SSP0843 202 COG0388 COG0388, Predicted amidohydrolase General function prediction only 73662609 Common - putative permease SSP1300 104 COG2962 RarD, Predicted permeases General function prediction only 73663139 Common - hypothetical protein SSP1830 7 None None None 73662229 Common recX recombination regulator RecX SSP0920 27 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 73661869 Common - Na+ H+ antiporter SSP0560 27 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 73662027 Common - putative permease of the major facilitator superfamily SSP0718 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663518 Common - 30S ribosomal protein S7 SSP2209 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 73661896 Pathogen - hypothetical protein SSP0587 1 None None None 73662684 Common - phosphoriborylanthranilate isomerase SSP1375 186 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 73662766 Common - tRNA delta-isopentenylpyrophosphate transferase SSP1457 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 73662230 Common - hypothetical protein SSP0921 4 None None None 73662102 Common - putative preprotein translocase subunit SSP0793 178 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 73662420 Common - putative cell-shape determining protein SSP1111 4 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 73661825 Common - hypothetical protein SSP0516 3 None None None 73662337 Common - acetoin utilization protein SSP1028 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 73663204 Common - hypothetical protein SSP1895 14 COG4815 COG4815, Uncharacterized protein conserved in bacteria Function unknown 73661337 Common - putative DNA modification methylase SSP0028 77 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 73662117 Pathogen - hypothetical protein SSP0808 1 None None None 73663737 Common - putative truncated glycine betaine transporter SSP2428 19 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 73663112 Common - putative hydrolase SSP1803 118 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73662167 Common - truncated ABC-type multidrug transport system ATPase component SSP0858 7 None None None 73661964 Common - hypothetical protein SSP0655 28 COG0679 COG0679, Predicted permeases General function prediction only 73663128 Common - NADH:flavin oxidoreductase SSP1819 177 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 73662919 Pathogen - hypothetical protein SSP1610 1 None None None 73662519 Common - hypothetical protein SSP1210 24 COG0011 COG0011, Uncharacterized conserved protein Function unknown 73662642 Common - putative lipopolysaccharide biosynthesis protein SSP1333 171 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 73661947 Common - molybdenum cofactor biosynthesis protein B SSP0638 170 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 73663351 Common - putative acetyltransferase SSP2042 96 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73661994 Common - translation initiation factor IF-1 SSP0685 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 73662656 Common - putative acylphosphatase SSP1347 53 COG1254 AcyP, Acylphosphatases Energy production and conversion 73662892 Common - hypothetical protein SSP1583 198 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 73661340 Pathogen - hypothetical protein SSP0031 2 COG4333 COG4333, Uncharacterized protein conserved in bacteria Function unknown 73662549 Common - lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex SSP1240 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 73663743 Pathogen - hypothetical protein SSP2434 1 None None None 73663224 Common pgk phosphoglycerate kinase SSP1915 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 73663047 Common - putative transcriptional regulator SSP1738 63 COG1316 LytR, Transcriptional regulator Transcription 73661517 Common - putative nitroreductase SSP0208 88 COG0778 NfnB, Nitroreductase Energy production and conversion 73662410 Common valS valyl-tRNA synthetase SSP1101 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663682 Common rpsF 30S ribosomal protein S6 SSP2373 201 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 73662219 Common - hypothetical protein SSP0910 118 COG1295 Rbn, Predicted membrane protein Function unknown 73663397 Common - putative ABC-type Mn Zn transport system periplasmic Mn Zn-binding protein SSP2088 160 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 73662214 Common - methionine aminopeptidase SSP0905 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 73661736 Common - imidazoleglycerol-phosphate dehydratase SSP0427 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 73662783 Common - hypothetical protein SSP1474 9 COG4195 COG4195, Phage-related replication protein General function prediction only 73663323 Common - putative aldo keto reductase SSP2014 170 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 73663377 Common - hypothetical protein SSP2068 24 COG3412 COG3412, Uncharacterized protein conserved in bacteria Function unknown 73662600 Common - putative chromosome replication initiation protein SSP1291 20 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 73662107 Pathogen - hypothetical protein SSP0798 1 None None None 73662868 Common - primosomal protein SSP1559 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 73663089 Common - hypothetical protein SSP1780 3 None None None 73662974 Common - hypothetical protein SSP1665 3 None None None 73663625 Common - putative proton sodium-glutamate symport protein SSP2316 162 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 73662318 Common - putative membrane protein involved in the export of teichoic acid SSP1009 30 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 73663461 Common - hypothetical protein SSP2152 69 COG1469 COG1469, Uncharacterized conserved protein Function unknown 73663628 Pathogen - hypothetical protein SSP2319 1 None None None 73662240 Common - putative phosphoglycerate dehydrogenase SSP0931 224 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 73662224 Common - hypothetical protein SSP0915 137 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 73663363 Common - hypothetical protein SSP2054 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 73663468 Common - hypothetical protein SSP2159 3 None None None 73661897 Pathogen - hypothetical protein SSP0588 1 None None None 73661452 Pathogen - hypothetical protein SSP0143 1 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 73662675 Common - putative oligoendopeptidase SSP1366 84 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 73662613 Common - putative 5'-3' exonuclease SSP1304 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 73663162 Common - hypothetical protein SSP1853 76 COG1801 COG1801, Uncharacterized conserved protein Function unknown 73662408 Common - truncated proline betaine transporter SSP1099 39 None None None 73663697 Pathogen - hypothetical protein SSP2388 1 None None None 73662518 Common - glucose kinase SSP1209 151 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 73661567 Pathogen - hypothetical protein SSP0258 1 None None None 73662435 Common - D-tyrosyl-tRNA deacylase SSP1126 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 73663358 Common - putative permease of the major facilitator superfamily SSP2049 28 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73661481 Common - putative indole-3-pyruvate decarboxylase SSP0172 221 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 73663193 Pathogen - hypothetical protein SSP1884 1 None None None 73662274 Common hemE uroporphyrinogen decarboxylase SSP0965 180 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 73661833 Common - putative dehydrogenase SSP0524 211 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 73662815 Common - putative protease SSP1506 210 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 73663539 Common - DNA repair protein RadA SSP2230 217 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 73661459 Common - hypothetical protein SSP0150 31 COG2311 COG2311, Predicted membrane protein Function unknown 73662267 Common - peptidyl-prolyl cis trans isomerase SSP0958 122 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 73662963 Common - hypothetical protein SSP1654 9 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 73663716 Common - putative sulfite reductase hemoprotein beta-component SSP2407 157 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 73662261 Common - hypothetical protein SSP0952 4 COG1476 COG1476, Predicted transcriptional regulators Transcription 73662245 Common - truncated ABC-type amino acid transport system periplasmic component SSP0936 12 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 73662735 Common - ABC-type phosphate phosphonate transport system ATPase component SSP1426 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 73663171 Common - hypothetical protein SSP1862 50 COG2035 COG2035, Predicted membrane protein Function unknown 73663740 Common - putative hydrolase SSP2431 108 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73662800 Common - polynucleotide phosphorylase/polyadenylase SSP1491 238 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 73662527 Common - putative glycine cleavage system T protein SSP1218 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 73661753 Common - putative amino acid transporter SSP0444 167 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 73662866 Common - putative N-formylmethionyl-tRNA deformylase SSP1557 200 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 73662371 Common - hypothetical protein SSP1062 60 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 73661551 Common - ABC-type amino acid transport system periplasmic component SSP0242 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 73661548 Common - hypothetical protein SSP0239 12 None None None 73663408 Pathogen - hypothetical protein SSP2099 1 None None None 73662969 Common rpmF 50S ribosomal protein L32 SSP1660 34 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 73661733 Common - cyclase-like protein hisF SSP0424 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 73662705 Common - putative transcriptional repressor of ribose operon SSP1396 126 COG1609 PurR, Transcriptional regulators Transcription 73662184 Common - putative sodium:sulfate symporter SSP0875 111 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 73663305 Common - putative periplasmic glycine betaine choline-binding protein of an ABC-type transport system SSP1996 159 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 73662807 Pathogen - hypothetical protein SSP1498 1 None None None 73662926 Pathogen - hypothetical protein SSP1617 1 None None None 73662649 Common - hypothetical protein SSP1340 4 None None None 73661687 Common - hypothetical protein SSP0378 56 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73661377 Common - putative UDP-glucose 6-dehydrogenase SSP0068 202 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 73662025 Common - putative UDP-N-acetylglucosamine pyrophosphorylase SSP0716 9 COG4284 COG4284, UDP-glucose pyrophosphorylase Carbohydrate transport and metabolism 73662897 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SSP1588 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 73662745 Common - homoserine kinase SSP1436 123 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 73662838 Common rpsP 30S ribosomal protein S16 SSP1529 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 73661840 Common - hypothetical protein SSP0531 27 COG0456 RimI, Acetyltransferases General function prediction only 73661680 Common - sortase A SSP0371 11 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 73663665 Pathogen - hypothetical protein SSP2356 1 None None None 73662947 Common - putative lipase SSP1638 131 COG0657 Aes, Esterase/lipase Lipid metabolism 73662935 Common - putative hexulose-6-phosphate synthase SSP1626 60 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 73662455 Common - hypothetical protein SSP1146 11 COG3906 COG3906, Uncharacterized protein conserved in bacteria Function unknown 73661758 Common - putative 3-hydroxyacyl-CoA dehydrogenase SSP0449 146 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 73661643 Common - hypothetical protein SSP0334 39 COG1288 COG1288, Predicted membrane protein Function unknown 73663428 Common - hypothetical protein SSP2119 3 None None None 73663722 Common - cystathionine beta-lyase cystathionine gamma-synthase SSP2413 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 73661491 Common - ferrichrome ABC transporter SSP0182 62 COG4594 FecB, ABC-type Fe3+-citrate transport system, periplasmic component Inorganic ion transport and metabolism 73663285 Common - hypothetical protein SSP1976 4 None None None 73661531 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein SSP0222 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 73662981 Common - hypothetical protein SSP1672 8 COG2322 COG2322, Predicted membrane protein Function unknown 73661855 Common - hypothetical protein SSP0546 5 COG4640 COG4640, Predicted membrane protein Function unknown 73663652 Common - putative truncated membrane transporter of cations and cationic drugs SSP2343 102 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 73663413 Common - putative lipase SSP2104 173 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 73662354 Common - hypothetical protein SSP1045 81 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 73662709 Pathogen - hypothetical protein SSP1400 1 None None None 73663574 Common - putative deoxyribonuclease SSP2265 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 73662480 Common holA DNA polymerase III subunit delta SSP1171 76 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 73661823 Common - putative transcriptional regulator SSP0514 26 COG1309 AcrR, Transcriptional regulator Transcription 73661940 Common - galactose-1-phosphate uridylyltransferase SSP0631 14 COG4468 GalT, Galactose-1-phosphate uridyltransferase Carbohydrate transport and metabolism 73661950 Common - putative molybdopterin-guanine dinucleotide biosynthesis protein B SSP0641 31 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 73662413 Common - putative signal peptidase SSP1104 18 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 73661766 Common - putative ABC-type nitrate sulfonate taurine bicarbonate transport system permease component SSP0457 193 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 73663082 Common - putative permease SSP1773 176 COG0628 PerM, Predicted permease General function prediction only 73661473 Common - putative permease of the major facilitator superfamily SSP0164 79 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662084 Common - F0F1 ATP synthase subunit A SSP0775 135 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 73662790 Common - putative competence-damage inducible protein SSP1481 159 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 73663551 Common - dihydropteroate synthase SSP2242 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 73661434 Common - beta-glucosidase SSP0125 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 73662904 Common - putative acetyltransferase SSP1595 3 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 73663580 Common - putative signal peptidase SSP2271 58 COG1774 COG1774, Uncharacterized homolog of PSP1 Function unknown 73662054 Common - starvation-inducible DNA-binding protein SSP0745 145 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 73663579 Common - DNA replication intiation control protein YabA SSP2270 13 COG4467 COG4467, Uncharacterized protein conserved in bacteria Function unknown 73663581 Common - DNA polymerase III delta' subunit SSP2272 216 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 73661962 Pathogen - hypothetical protein SSP0653 1 None None None 73661912 Pathogen - hypothetical protein SSP0603 1 None None None 73662015 Common - putative permease of the major facilitator superfamily SSP0706 149 None None None 73663174 Common - putative ABC transporter permease component SSP1865 112 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 73663298 Common - 7-cyano-7-deazaguanine reductase SSP1989 145 COG0780 COG0780, Enzyme related to GTP cyclohydrolase I General function prediction only 73661523 Pathogen - hypothetical protein SSP0214 2 None None None 73661793 Pathogen - hypothetical protein SSP0484 2 None None None 73662940 Common - truncated arsenic efflux pump protein SSP1631 41 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 73661915 Common - putative dehydrogenase SSP0606 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 73663267 Common - excinuclease ABC subunit A SSP1958 243 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 73662555 Common - alpha-D-14-glucosidase SSP1246 165 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 73663349 Common - putative lysine efflux permease SSP2040 75 COG1279 COG1279, Lysine efflux permease General function prediction only 73663002 Common - dihydrolipoamide dehydrogenase SSP1693 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 73663474 Common - putative fibronectin-binding protein SSP2165 7 None None None 73662175 Common - hypothetical protein SSP0866 12 COG4927 COG4927, Predicted choloylglycine hydrolase General function prediction only 73662443 Common - hypothetical protein SSP1134 14 None None None 73663502 Common - hypothetical protein SSP2193 18 None None None 73663169 Common - hypothetical protein SSP1860 184 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 73662334 Pathogen - hypothetical protein SSP1025 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73661927 Common - ABC-type amino acid transport system permease component SSP0618 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 73663236 Pathogen - hypothetical protein SSP1927 1 None None None 73661596 Common - putative inosine-uridine preferring nucleoside hydrolase SSP0287 87 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 73661313 Common recF recombination protein F SSP0004 163 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 73663632 Common - IMP dehydrogenase SSP2323 240 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 73662398 Common tig trigger factor SSP1089 215 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 73662203 Common - putative RNA methyltransferase SSP0894 199 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 73663277 Common - hypothetical protein SSP1968 130 COG1739 COG1739, Uncharacterized conserved protein Function unknown 73663606 Pathogen - truncated lipase precursor SSP2297 1 None None None 73663067 Common - hypothetical protein SSP1758 4 COG4873 COG4873, Uncharacterized protein conserved in bacteria Function unknown 73662619 Common - hypothetical protein SSP1310 10 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 73661446 Common - ABC-type multidrug transport system ATPase component SSP0137 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73662765 Common - hypothetical protein SSP1456 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 73661749 Common - hypothetical protein SSP0440 23 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 73662633 Common - signal transduction histidine kinase arlS SSP1324 218 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 73661602 Common - similar to immunodominant antigen A SSP0293 5 None None None 73663494 Common - transcriptional regulator SSP2185 190 COG0583 LysR, Transcriptional regulator Transcription 73661541 Common - ornithine carbamoyltransferase SSP0232 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 73662291 Common - putative translaldolase SSP0982 100 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 73663654 Pathogen - hypothetical protein SSP2345 1 None None None 73663640 Common - putative nitroreductase SSP2331 86 COG0778 NfnB, Nitroreductase Energy production and conversion 73662773 Common - DNA mismatch repair protein SSP1464 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 73662037 Common - phosphotransferase system mannitol-specific IIBC component SSP0728 41 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 73662826 Common - tRNA (uracil-5-)-methyltransferase Gid SSP1517 194 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 73663203 Common - putative lysophospholipase SSP1894 127 COG2267 PldB, Lysophospholipase Lipid metabolism 73662126 Common - threonine dehydratase SSP0817 212 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 73662112 Common - hypothetical protein SSP0803 4 COG3402 COG3402, Uncharacterized conserved protein Function unknown 73663534 Common - hypothetical protein SSP2225 38 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 73661934 Common - putative biotin biosynthesis protein SSP0625 59 COG1268 BioY, Uncharacterized conserved protein General function prediction only 73662284 Common - phosphoenolpyruvate carboxykinase SSP0975 96 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 73663593 Common - glutamate synthase large subunit SSP2284 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 73662843 Common - signal recognition particle GTPase SSP1534 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 73661326 Common - adenylosuccinate synthase SSP0017 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 73662650 Common - hypothetical protein SSP1341 148 COG0714 COG0714, MoxR-like ATPases General function prediction only 73663319 Common - putative radical activating enzyme SSP2010 116 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 73661374 Common - putative glycosyl transferase SSP0065 157 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 73661811 Common - truncated lipase precursor SSP0502 7 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 73663078 Common - putative permease of the major facilitator superfamily SSP1769 37 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662500 Common - glycyl-tRNA synthetase SSP1191 88 COG0423 GRS1, Glycyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 73662381 Common - isocitrate dehydrogenase SSP1072 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 73661671 Common - putative transcriptional regulator SSP0362 130 COG1609 PurR, Transcriptional regulators Transcription 73661386 Common - hypothetical protein SSP0077 2 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 73662237 Common - hypothetical protein SSP0928 12 COG4129 COG4129, Predicted membrane protein Function unknown 73663370 Common - signal transduction histidine kinase SSP2061 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 73661406 Common - putative truncated beta-mannosidase precursor SSP0097 30 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 73662327 Common - putative aminopeptidase SSP1018 78 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 73662330 Common - putative tRNA-binding protein SSP1021 178 COG0073 ARC1, EMAP domain General function prediction only 73663677 Pathogen - hypothetical protein SSP2368 1 None None None 73662851 Common - putative zinc metalloprotease SSP1542 47 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 73663022 Common - hypothetical protein SSP1713 24 COG4721 COG4721, Predicted membrane protein Function unknown 73662917 Pathogen - hypothetical protein SSP1608 1 None None None 73661952 Common - molybdopterin converting factor small subunit SSP0643 17 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 73661498 Common - putative cationic amino acid transporter SSP0189 179 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 73662179 Pathogen - hypothetical protein SSP0870 1 None None None 73663442 Pathogen - hypothetical protein SSP2133 1 None None None 73662498 Common era GTP-binding protein Era SSP1189 231 COG1159 Era, GTPase General function prediction only 73662483 Common - coproporphyrinogen III oxidase SSP1174 214 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 73661589 Common - hypothetical protein SSP0280 14 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 73661515 Common - putative truncated permease of the major facilitator superfamily SSP0206 26 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 73661779 Common - hypothetical protein SSP0470 28 COG3817 COG3817, Predicted membrane protein Function unknown 73663642 Common - putative alkyl hydroperoxide reductase subunit C SSP2333 215 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 73663024 Common - putative ABC-type cobalt transport system permease component SSP1715 33 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 73662170 Pathogen - hypothetical protein SSP0861 1 None None None 73662282 Common - hypothetical protein SSP0973 6 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 73663071 Common - putative cation transport protein SSP1762 99 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 73663018 Common - hypothetical protein SSP1709 4 None None None 73661368 Common - UTP-glucose-1-phosphate uridyltransferase SSP0059 234 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 73661984 Common rplE 50S ribosomal protein L5 SSP0675 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 73661450 Pathogen - hypothetical protein SSP0141 1 None None None 73661649 Common - thioredoxin SSP0340 16 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 73661361 Common - putative restriction endonuclease S subunit SSP0052 67 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 73661999 Common rplQ 50S ribosomal protein L17 SSP0690 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 73663614 Common - hypothetical protein SSP2305 9 COG4195 COG4195, Phage-related replication protein General function prediction only 73661397 Common - putative ABC transporter permease SSP0088 79 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 73663221 Common - enolase SSP1912 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 73662572 Common - ferredoxin SSP1263 8 COG1141 Fer, Ferredoxin Energy production and conversion 73661814 Common - putative transcriptional regulator SSP0505 76 COG1846 MarR, Transcriptional regulators Transcription 73662465 Common - biotin carboxylase SSP1156 224 COG0439 AccC, Biotin carboxylase Lipid metabolism 73663512 Pathogen - hypothetical protein SSP2203 1 None None None 73661560 Common - O-acetylhomoserine sulfhydrylase SSP0251 207 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 73661715 Common - hypothetical protein SSP0406 9 COG4876 COG4876, Uncharacterized protein conserved in bacteria Function unknown 73662341 Common - truncated formyltetrahydrofolate synthetase SSP1032 87 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 73661457 Common - truncated transcriptional regulator SSP0148 74 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 73663639 Pathogen - hypothetical protein SSP2330 2 None None None 73662190 Common - hypothetical protein SSP0881 3 None None None 73663102 Common - ABC-type dipeptide oligopeptide nickel transport system permease component SSP1793 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 73662095 Common - hypothetical protein SSP0786 4 None None None 73661989 Common rpsE 30S ribosomal protein S5 SSP0680 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 73663395 Common - putative ABC-type Mn Zn transport system ATPase component SSP2086 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 73662018 Common - putative ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP0709 93 COG4594 FecB, ABC-type Fe3+-citrate transport system, periplasmic component Inorganic ion transport and metabolism 73662888 Common - putative cell-division initiation protein SSP1579 25 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 73661903 Common - PTS system sucrose-specific IIBC component SSP0594 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73663093 Common - hypothetical protein SSP1784 57 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 73662872 Common - putative fibrinogen binding protein SSP1563 87 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 73662722 Common - hypothetical protein SSP1413 6 COG4846 CcdC, Membrane protein involved in cytochrome C biogenesis Posttranslational modification, protein turnover, chaperones 73661580 Common - putative ABC-type oligopeptide transport system ATPase component SSP0271 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 73662429 Common tgt queuine tRNA-ribosyltransferase SSP1120 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 73662827 Common - DNA topoisomerase I SSP1518 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 73662669 Common - hypothetical protein SSP1360 43 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 73662662 Common - tetrahydrodipicolinate acetyltransferase SSP1353 145 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 73662557 Common - glucose-6-phosphate 1-dehydrogenase SSP1248 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 73663715 Common - uroporphyrin-III C-methyltransferase SSP2406 206 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 73662755 Common - response regulator SSP1446 213 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 73663011 Pathogen - hypothetical protein SSP1702 1 None None None 73661488 Common - putative transcriptional regulator SSP0179 40 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 73662877 Common - orotidine-5-phosphate decarboxylase SSP1568 162 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 73662136 Common - putative glycoprotease SSP0827 199 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 73661700 Common - putative dioxygenase SSP0391 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73662165 Common - putative transcriptional regulator SSP0856 142 COG1725 COG1725, Predicted transcriptional regulators Transcription 73661505 Common - choline dehydrogenase SSP0196 95 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 73662312 Common - hypothetical protein SSP1003 29 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 73661351 Common - hypothetical protein SSP0042 2 None None None 73662232 Pathogen - putative ABC-type polysaccharide polyol phosphate export system permease component SSP0923 1 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73663049 Common - putative acetyltransferase SSP1740 92 COG2153 ElaA, Predicted acyltransferase General function prediction only 73662074 Common - thymidine kinase SSP0765 89 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 73661325 Common - replicative DNA helicase SSP0016 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 73661632 Common - glycine betaine transporter SSP0323 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 73662682 Common trpA tryptophan synthase subunit alpha SSP1373 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 73662212 Common - putative truncated transposase SSP0903 118 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 73661693 Pathogen - hypothetical protein SSP0384 1 None None None 73663110 Common - putative acyltransferase SSP1801 95 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 73662035 Common - phosphotransferase system mannitol-specific IIA domain SSP0726 73 COG4668 MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain Carbohydrate transport and metabolism 73662159 Common - transcriptional regulator SSP0850 25 COG1846 MarR, Transcriptional regulators Transcription 73663050 Common - bifunctional autolysin precursor SSP1741 80 COG4193 LytD, Beta- N-acetylglucosaminidase Carbohydrate transport and metabolism 73663226 Common - glycolytic operon regulator SSP1917 43 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 73662514 Common - 50S ribosomal protein L33 type 2 SSP1205 83 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 73661544 Common - putative truncated glucosamine-6-phosphate isomerase SSP0235 81 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 73661604 Common - D-lactate dehydrogenase SSP0295 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 73663040 Common - quinol oxidase polypeptide I SSP1731 168 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 73661728 Common - putative short chain dehydrogenase SSP0419 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 73662339 Common - acetyl-CoA synthetase SSP1030 224 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 73663118 Common - putative ATP-dependent nuclease subunit B SSP1809 61 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 73662890 Common - hypothetical protein SSP1581 9 COG0762 COG0762, Predicted integral membrane protein Function unknown 73663670 Common - hypothetical protein SSP2361 13 None None None 73663324 Common - hypothetical protein SSP2015 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 73662197 Common - hypothetical protein SSP0888 9 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 73663148 Common - hypothetical protein SSP1839 109 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 73661608 Common - ABC-type transport system involved in lipoprotein release ATPase component SSP0299 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 73663166 Common - hypothetical protein SSP1857 186 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 73662654 Common - hypothetical protein SSP1345 35 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 73663680 Common rpsR 30S ribosomal protein S18 SSP2371 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 73661829 Common - putative oxidoreductase SSP0520 110 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73662061 Common - putative metal-dependent amidase SSP0752 155 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 73661357 Pathogen - hypothetical protein SSP0048 1 None None None 73661803 Common - hypothetical protein SSP0494 7 None None None 73663375 Common - hypothetical protein SSP2066 28 COG3949 COG3949, Uncharacterized membrane protein Function unknown 73662931 Common - putative permease SSP1622 119 COG2962 RarD, Predicted permeases General function prediction only 73662472 Common - hypothetical protein SSP1163 96 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 73661622 Common - putative drug exporter of the RND superfamily SSP0313 95 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 73662351 Common - putative glycerophosphoryl diester phosphodiesterase SSP1042 156 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 73662710 Common - transcription antiterminator SSP1401 30 COG3711 BglG, Transcriptional antiterminator Transcription 73663004 Common - pyruvate dehydrogenase E1 component beta subunit SSP1695 188 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 73663087 Common ppnK inorganic polyphosphate/ATP-NAD kinase SSP1778 236 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 73662620 Common - hypothetical protein SSP1311 11 None None None 73662563 Common - ferric uptake regulator-like protein SSP1254 206 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 73661528 Common - putative amino acid transporter SSP0219 177 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 73663033 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase SSP1724 172 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 73661939 Common - UDP-glucose 4-epimerase SSP0630 233 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 73663749 Common - carbon starvation protein CstA SSP2440 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 73661798 Common - putative protein-disulfide isomerase SSP0489 37 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 73662602 Pathogen - hypothetical protein SSP1293 1 None None None 73663526 Common rplA 50S ribosomal protein L1 SSP2217 243 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 73661724 Common - hypothetical protein SSP0415 23 COG3949 COG3949, Uncharacterized membrane protein Function unknown 73661856 Common - putative permease of the major facilitator superfamily SSP0547 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662984 Common - pyruvate carboxylase SSP1675 240 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 73661976 Common rpsS 30S ribosomal protein S19 SSP0667 240 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 73663701 Common - putative truncated carboxypeptidase SSP2392 138 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 73662992 Common - hypothetical protein SSP1683 9 COG4493 COG4493, Uncharacterized protein conserved in bacteria Function unknown 73663387 Common - teichoic acid biosynthesis protein SSP2078 111 COG0615 TagD, Cytidylyltransferase Cell envelope biogenesis, outer membrane / Lipid metabolism 73663434 Common - putative heme peroxidase SSP2125 35 COG3253 COG3253, Uncharacterized conserved protein Function unknown 73662146 Common - sucrose-6-phosphate hydrolase SSP0837 52 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 73663381 Common - ABC-type cobalamin Fe3+-siderophores transport system permease component SSP2072 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 73662043 Common - hypothetical protein SSP0734 69 COG0622 COG0622, Predicted phosphoesterase General function prediction only 73661772 Common - two-component response regulator SSP0463 156 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 73661851 Common - ABC-type transport system involved in lipoprotein release permease component SSP0542 41 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 73663035 Common - phosphoribosylcarboxyaminoimidazole mutase SSP1726 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 73661537 Common - hypothetical protein SSP0228 13 None None None 73661616 Common - putative regulatory protein SSP0307 8 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 73663080 Common - putative esterase SSP1771 7 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 73661512 Common - putative permease of the major facilitator superfamily SSP0203 158 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662521 Common - putative late competence protein SSP1212 191 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 73661867 Pathogen - hypothetical protein SSP0558 2 COG4709 COG4709, Predicted membrane protein Function unknown 73661437 Pathogen - hypothetical protein SSP0128 1 None None None 73662288 Common - CrcB-like protein SSP0979 157 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 73662104 Common - putative cardiolipin synthetase SSP0795 155 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 73661665 Common - putative glycosyl glycerophosphate transferase involved in teichoic acid biosynthesis SSP0356 32 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 73663459 Common - hypothetical protein SSP2150 5 None None None 73662402 Common - hemA concentration negative effector SSP1093 4 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 73663528 Common - transcription antitermination factor SSP2219 215 COG0250 NusG, Transcription antiterminator Transcription 73662196 Common - NAD-dependent DNA ligase SSP0887 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 73663218 Common secG preprotein translocase subunit SecG SSP1909 46 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 73661610 Common - putative dehydrogenase SSP0301 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73663295 Common - ribonucleotide-diphosphate reductase subunit alpha SSP1986 216 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 73663739 Pathogen - putative truncated transcriptional regulator SSP2430 1 None None None 73662924 Common - hypothetical protein SSP1615 3 None None None 73663509 Common - succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A SSP2200 95 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 73662809 Common - putative ribosomal protein SSP1500 20 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 73662253 Common fumC fumarate hydratase SSP0944 233 COG0114 FumC, Fumarase Energy production and conversion 73661686 Common - putative NADPH-quinone reductase SSP0377 72 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 73661379 Common - capsular polysaccharide synthesis protein SSP0070 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 73662820 Common tsf elongation factor Ts SSP1511 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 73661553 Common - ABC-type polar amino acid transport system ATPase component SSP0244 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 73662512 Common - superoxide dismutase SSP1203 206 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 73661429 Common - hypothetical protein SSP0120 66 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 73662845 Common - dsRNA-specific ribonuclease RNase III SSP1536 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 73663560 Common - putative tetrapyrrole methylase SSP2251 154 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 73662689 Pathogen - hypothetical protein SSP1380 1 None None None 73663159 Common - lipoyl synthase SSP1850 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 73663488 Common - putative dehydrogenase SSP2179 45 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 73662736 Common - putative phosphate phosphonate-binding protein SSP1427 89 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 73662949 Common - replication initiator protein A SSP1640 9 None None None 73663405 Common - putative monovalent cation/H+ antiporter subunit A SSP2096 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 73663623 Pathogen - hypothetical protein SSP2314 1 None None None 73661874 Common - ABC-type Na+ efflux pump permease component SSP0565 31 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 73661385 Common - putative glycosyl transferase SSP0076 168 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73662611 Common - putative extracellular amidase SSP1302 6 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 73662848 Common - malonyl CoA-acyl carrier protein transacylase SSP1539 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 73661786 Common - hypothetical protein SSP0477 5 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 73661587 Common - dihydroorotate dehydrogenase 2 SSP0278 232 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 73662967 Common - rRNA methylase SSP1658 212 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 73663466 Common - putative deoxyadenosine kinase SSP2157 39 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 73662976 Common - putative glycerophosphoryl diester phosphodiesterase SSP1667 138 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 73662109 Common ddl D-alanyl-alanine synthetase A SSP0800 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 73662009 Common - putative zinc-binding dehydrogenase SSP0700 181 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 73661942 Common - putative ABC-type sulfate molybdate transport system permease component SSP0633 232 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 73661835 Common - Dihydroxyacetone kinase SSP0526 75 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 73663365 Common - putative transcriptional regulator SSP2056 4 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73663263 Common - hypothetical protein SSP1954 9 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 73661627 Common - putative esterase SSP0318 38 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 73663275 Common - putative helicase SSP1966 19 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 73661899 Common - putative formate nitrite transporter SSP0590 51 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 73662779 Common - hypothetical protein SSP1470 13 COG0011 COG0011, Uncharacterized conserved protein Function unknown 73662424 Common obgE GTPase ObgE SSP1115 249 COG0536 Obg, Predicted GTPase General function prediction only 73662263 Common - hypothetical protein SSP0954 16 COG3679 COG3679, Uncharacterized conserved protein Function unknown 73663228 Pathogen - hypothetical protein SSP1919 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73663256 Common - integrase SSP1947 145 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 73663447 Pathogen - hypothetical protein SSP2138 1 None None None 73663195 Common - putative efflux pump SSP1886 75 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 73661638 Common - Na+ H+ antiporter SSP0329 59 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 73662629 Common - putative acetyltransferase SSP1320 20 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73662503 Common - DNA primase SSP1194 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 73662631 Common - putative phospholipid phosphatase SSP1322 127 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 73663353 Pathogen - hypothetical protein SSP2044 1 None None None 73663695 Pathogen - putative truncated transcriptional regulator SSP2386 2 None None None 73663747 Common - putative transcriptional regulator SSP2438 120 COG0789 SoxR, Predicted transcriptional regulators Transcription 73661890 Common - putative truncated transposase SSP0581 70 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 73661430 Common - hypothetical protein SSP0121 2 COG1737 RpiR, Transcriptional regulators Transcription 73663104 Pathogen - hypothetical protein SSP1795 1 None None None 73662301 Pathogen - hypothetical protein SSP0992 1 None None None 73663667 Pathogen - hypothetical protein SSP2358 1 None None None 73663390 Common - teichoic acid ABC transporter permease protein SSP2081 105 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73663069 Pathogen - hypothetical protein SSP1760 1 None None None 73663167 Common - NifU homolog involved in Fe-S cluster formation SSP1858 165 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 73662910 Common - putative truncated adenylate kinase SSP1601 23 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 73661594 Common - hypothetical protein SSP0285 8 None None None 73663492 Common - putative 2-dehydro-3-deoxyphosphogluconate aldolase SSP2183 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 73663544 Common - nucleoside permease SSP2235 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 73663307 Common - ATP-dependent DNA helicase SSP1998 235 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 73663504 Common - putative teichoic acid translocation permease SSP2195 98 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73663604 Common - truncated lipase precursor SSP2295 5 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 73661444 Common - cell wall-anchored protein SSP0135 14 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73661658 Common - poly-gamma-glutamate synthesis protein PgsC SSP0349 11 None None None 73662336 Common - catabolite control protein SSP1027 131 COG1609 PurR, Transcriptional regulators Transcription 73662177 Common - hypothetical protein SSP0868 3 None None None 73662965 Common - putative phenylalanyl-tRNA synthetase beta subunit SSP1656 248 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 73662597 Common - putative Biotin-acetyl-CoA carboxylase ligase SSP1288 224 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 73661730 Common - putative glyoxalase family protein SSP0421 18 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73662445 Common - putative oxidoreductase SSP1136 109 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73661598 Common - putative DNA-3-methyladenine glycosidase SSP0289 92 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 73663630 Pathogen - hypothetical protein SSP2321 1 None None None 73662833 Common - hypothetical protein SSP1524 10 COG4485 COG4485, Predicted membrane protein Function unknown 73661573 Common ureB urease subunit beta SSP0264 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 73662218 Common - two-component response regulator SSP0909 200 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 73661750 Common - ABC transport system ATPase component SSP0441 249 COG4619 COG4619, ABC-type uncharacterized transport system, ATPase component General function prediction only 73662530 Common - putative sulfurtransferase SSP1221 104 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 73661881 Common - urocanate hydratase SSP0572 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 73662093 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SSP0784 209 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 73661354 Pathogen - hypothetical protein SSP0045 1 None None None 73663454 Common - putative acetyl-CoA c-acetyltransferase SSP2145 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 73663499 Common - putative oxidoreductase SSP2190 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 73661439 Pathogen - putative antibacterial peptide SSP0130 1 None None None 73662119 Common - serine phosphatase RsbU regulator of sigma subunit SSP0810 105 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 73663076 Common - UDP-N-acetylmuramyl tripeptide synthase SSP1767 215 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 73662290 Pathogen - hypothetical protein SSP0981 1 None None None 73663656 Pathogen - hypothetical protein SSP2347 1 None None None 73661969 Common - putative xanthine uracil permease SSP0660 149 COG2252 COG2252, Permeases General function prediction only 73662728 Common - hypothetical protein SSP1419 64 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 73663095 Common - putative competence protein SSP1786 12 COG4469 CoiA, Competence protein General function prediction only 73661651 Common - putative esterase SSP0342 75 COG0657 Aes, Esterase/lipase Lipid metabolism 73661315 Common - DNA gyrase subunit A SSP0006 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 73661543 Common - truncated phosphotransferase system glucose maltose N-acetylglucosamine-specific IIC component SSP0234 50 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73663484 Common - putative agmatinase SSP2175 136 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 73661847 Common - putative glycosyltransferase SSP0538 188 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 73662644 Common - putative dihydrofolate reductase family SSP1335 78 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 73662652 Common - branched-chain amino acid carrier protein SSP1343 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 73662295 Pathogen - putative DNA-binding protein SSP0986 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 73661992 Common secY preprotein translocase subunit SecY SSP0683 245 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 73662114 Common - hypothetical protein SSP0805 13 COG3402 COG3402, Uncharacterized conserved protein Function unknown 73662086 Common - F0F1-type ATP synthase b subunit' SSP0777 117 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 73661533 Common - succinyl-diaminopimelate desuccinylase SSP0224 206 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 73662548 Common - branched-chain alpha-keto acid dehydrogenase E1 beta subunit SSP1239 217 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 73662056 Common - deoxyribose-phosphate aldolase SSP0747 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 73663702 Common - formate dehydrogenase SSP2393 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 73662188 Common nadE NAD synthetase SSP0879 162 COG0171 NadE, NAD synthase Coenzyme metabolism 73663415 Pathogen - hypothetical protein SSP2106 1 None None None 73661642 Common - pyruvate oxidase SSP0333 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 73661932 Common - putative ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP0623 46 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 73663423 Common - hypothetical protein SSP2114 4 None None None 73661418 Pathogen - hypothetical protein SSP0109 1 None None None 73661917 Common - putative SMR-type multidrug efflux transporter SSP0608 93 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 73663752 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA SSP2443 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 73662638 Common - truncated transcriptional regulator SSP1329 117 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73662013 Common - alkaline shock protein 23 SSP0704 37 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 73662356 Common - putative aminotransferase SSP1047 236 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 73661388 Pathogen - hypothetical protein SSP0079 2 None None None 73663300 Common - putative di-tripepride permease SSP1991 80 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 73662020 Common - putative ABC-type cobalamin Fe3+-siderophores transport system permease component SSP0711 191 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 73661768 Common - putative ABC-type nitrate sulfonate taurine bicarbonate transport system ATPase component SSP0459 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 73662002 Common - putative ABC-type cobalt transport system permease component SSP0693 70 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 73662858 Common - putative thiamine pyrophosphokinase SSP1549 46 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 73662272 Common - putative transporter protein SSP0963 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 73663160 Common - hypothetical protein SSP1851 79 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 73661577 Common - putative ABC-type oligopeptide transport system permease component SSP0268 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 73663265 Common - prolipoprotein diacylglyceryl transferase SSP1956 198 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 73663472 Common - branched-chain amino acid aminotransferase SSP2163 215 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 73661791 Common - hypothetical protein SSP0482 2 None None None 73662707 Common - putative permease SSP1398 169 COG0628 PerM, Predicted permease General function prediction only 73661921 Common - putative Na+ H+ antiporter SSP0612 52 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 73663565 Common - phosphoribosylpyrophosphate synthetase SSP2256 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 73661886 Common - hypothetical protein SSP0577 85 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 73662733 Common - ABC-type phosphate phosphonate transport system permease component SSP1424 94 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 73662206 Common - putative exonuclease SSP0897 181 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 73663583 Common - thymidylate kinase SSP2274 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 73662802 Common - riboflavin kinase; FAD synthase SSP1493 211 COG0196 RibF, FAD synthase Coenzyme metabolism 73661432 Common - putative phosphotransferase system IIABC component SSP0123 53 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73661930 Common - putative ABC-type polar amino acid transport system ATPase component SSP0621 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 73662023 Common - hypothetical protein SSP0714 2 None None None 73661547 Common - phosphotransferase system cellobiose-specific component IIC SSP0238 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 73662593 Common - putative Zn-dependent protease SSP1284 42 COG2738 COG2738, Predicted Zn-dependent protease General function prediction only 73662358 Common - hypothetical protein SSP1049 115 COG0730 COG0730, Predicted permeases General function prediction only 73663585 Common recR recombination protein RecR SSP2276 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 73661796 Common - fmhA protein SSP0487 17 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 73661788 Common - putative permease of the major facilitator superfamily SSP0479 140 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663541 Common - ATP:guanido phosphotransferase SSP2232 25 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 73661593 Common - hypothetical protein SSP0284 11 None None None 73662596 Common - tRNA CCA-pyrophosphorylase SSP1287 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 73662302 Common - periplasmic glycine betaine choline-binding protein of an ABC-type transport system osmoprotectant binding protein SSP0993 88 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 73661967 Common - putative acetyltransferase SSP0658 4 None None None 73661974 Common rplW 50S ribosomal protein L23 SSP0665 198 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 73663746 Pathogen - hypothetical protein SSP2437 1 None None None 73662617 Common - hypothetical protein SSP1308 3 None None None 73663568 Common - putative translation initiation inhibitor SSP2259 199 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 73661438 Common - methionine sulfoxide reductase A SSP0129 203 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 73662763 Common - putative GTPase SSP1454 218 COG2262 HflX, GTPases General function prediction only 73663485 Common - putative Mn2+ Fe2+ transporter SSP2176 103 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 73663645 Pathogen - hypothetical protein SSP2336 1 None None None 73661679 Common - putative acetyltransferase SSP0370 126 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 73663713 Common - precorrin-2 dehydrogenase SSP2404 141 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 73662540 Common xseA exodeoxyribonuclease VII large subunit SSP1231 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 73661943 Common - putative ABC-type sulfate molybdate transport system ATPase component SSP0634 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 73662788 Common - hypothetical protein SSP1479 76 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 73662128 Common - isopropylmalate isomerase large subunit SSP0819 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 73661759 Common - hypothetical protein SSP0450 29 COG0824 FcbC, Predicted thioesterase General function prediction only 73661929 Common - putative ABC-type amino acid transport system periplasmic component SSP0620 61 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 73662008 Common - putative NADP-dependent oxidoreductase SSP0699 107 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 73663470 Pathogen - hypothetical protein SSP2161 1 None None None 73662394 Common rpmI 50S ribosomal protein L35 SSP1085 172 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 73662088 Common - F0F1 ATP synthase subunit alpha SSP0779 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 73662001 Common - putative ABC transporter ATP-binding protein SSP0692 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 73662559 Common - putative pyrroline-5-carboxylate reductase SSP1250 215 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 73662879 Common - carbamoyl phosphate synthase small subunit SSP1570 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 73663287 Common - UDP-N-acetylenolpyruvoylglucosamine reductase SSP1978 185 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 73662842 Common - hypothetical protein SSP1533 28 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 73661323 Common - hypothetical protein SSP0014 86 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 73662523 Common - putative exogenous DNA-binding protein SSP1214 8 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 73662928 Common - putative hexulose-6-phosphate synthase SSP1619 58 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 73661442 Common - ABC-type multidrug transport system ATPase component SSP0133 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73663609 Common - hypothetical protein SSP2300 6 COG5646 COG5646, Uncharacterized conserved protein Function unknown 73663673 Pathogen - hypothetical protein SSP2364 1 None None None 73662729 Common - guanosine 5'-monophosphate oxidoreductase SSP1420 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 73661412 Common - Lactose operon transcription activator SSP0103 60 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73661655 Common - succinyl-diaminopimelate desuccinylase SSP0346 215 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 73661574 Common ureA urease subunit gamma SSP0265 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 73662081 Common - uracil phosphoribosyltransferase SSP0772 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 73662233 Common - hypothetical protein SSP0924 16 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 73663477 Common - putative alkylphosphonate uptake protein SSP2168 103 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 73663733 Common - putative fatty oxidation complex protein SSP2424 162 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 73662771 Common - putative MccC family protein SSP1462 77 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 73663427 Common - putative oxidoreductase SSP2118 207 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 73662151 Common - accessory gene regulator B SSP0842 7 COG4512 AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription 73662430 Common - putative preprotein translocase subunit SSP1121 83 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 73662716 Common - putative thioesterase SSP1407 89 COG0824 FcbC, Predicted thioesterase General function prediction only 73662915 Common - putative transposase SSP1606 13 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 73661747 Common - hypothetical protein SSP0438 8 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 73661419 Common - putative glycosyltransferase SSP0110 108 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 73662864 Common - putative tRNA and rRNA cytosine-C5-methylase SSP1555 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 73661440 Pathogen - immunodominant antigen SSP0131 1 None None None 73663530 Common rpmG 50S ribosomal protein L33 SSP2221 47 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 73663602 Common - dihydroxyacid dehydratase phosphogluconate dehydratase SSP2293 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 73663260 Common - hypothetical protein SSP1951 102 COG0391 COG0391, Uncharacterized conserved protein Function unknown 73661661 Common - putative gamma-glutamyltranspeptidase precursor SSP0352 145 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 73661858 Common - hypothetical protein SSP0549 105 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 73662552 Common - putative peptidase SSP1243 188 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 73662365 Common - putative universal stress protein UspA and related nucleotide-binding protein SSP1056 132 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 73662446 Common - putative truncated ABC-type transport system ATPase component SSP1137 10 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 73661990 Common rpmD 50S ribosomal protein L30 SSP0681 153 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 73662532 Pathogen - hypothetical protein SSP1223 1 None None None 73662433 Common - adenine phosphoribosyltransferase SSP1124 181 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 73661805 Pathogen - hypothetical protein SSP0496 1 None None None 73663451 Common - proline betaine transporter SSP2142 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663522 Common rpoB DNA-directed RNA polymerase subunit beta SSP2213 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 73663326 Common - PTS system fructose-specific IIABC component SSP2017 141 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 73663291 Common - putative ABC-type cobalamin Fe3+-siderophores transport system ATPase component SSP1982 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 73662902 Common - hypothetical protein SSP1593 142 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 73662416 Pathogen - hypothetical protein SSP1107 1 None None None 73663535 Common cysS cysteinyl-tRNA synthetase SSP2226 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73661882 Common - imidazolonepropionase SSP0573 110 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 73662280 Common - O-succinylbenzoic acid synthetase SSP0971 26 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 73662795 Common - putative protease SSP1486 187 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 73661954 Common - molybdenum cofactor biosynthesis protein A SSP0645 198 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 73661317 Common - histidine ammonia-lyase SSP0008 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 73662909 Common - putative truncated adenylate kinase SSP1600 8 None None None 73661365 Common - hypothetical protein SSP0056 3 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 73663008 Pathogen - hypothetical protein SSP1699 1 None None None 73663175 Common - Uncharacterized ABC-type transport system ATPase component SSP1866 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 73663289 Pathogen - hypothetical protein SSP1980 1 None None None 73663163 Common - putative dioxygenase SSP1854 145 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 73662769 Common glpK glycerol kinase SSP1460 180 COG0554 GlpK, Glycerol kinase Energy production and conversion 73662622 Common - dihydrofolate reductase SSP1313 148 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 73661769 Common - hypothetical protein SSP0460 5 None None None 73663406 Common - putative recombinase SSP2097 44 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 73663464 Common - putative hydrolase SSP2155 132 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73661891 Common - putative transcriptional regulator SSP0582 49 COG1737 RpiR, Transcriptional regulators Transcription 73661391 Common - acetolactate synthase SSP0082 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 73663223 Common - triosephosphate isomerase SSP1914 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 73661562 Common - cystathionine gamma-synthase SSP0253 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 73662376 Common - acetyl-CoA carboxylase carboxyltransferase subunit alpha SSP1067 178 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 73663620 Common - putative sugar transporter SSP2311 153 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662278 Common - hypothetical protein SSP0969 75 COG2128 COG2128, Uncharacterized conserved protein Function unknown 73662568 Common - ribosomal large subunit pseudouridine synthase B SSP1259 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 73661554 Common - putative truncated transcriptional antiterminator SSP0245 12 COG3711 BglG, Transcriptional antiterminator Transcription 73662458 Common - putative protease SSP1149 141 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 73662942 Common - arsenate reductase SSP1633 145 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 73662439 Pathogen - hypothetical protein SSP1130 1 None None None 73662921 Common - truncated sorbitol dehydrogenase SSP1612 159 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 73661830 Common - putative oxidoreductase SSP0521 71 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73662279 Common - O-succinylbenzoic acid-CoA ligase SSP0970 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73661760 Common - ABC-type proline glycine betaine transport system ATPase component SSP0451 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 73661486 Common - hypothetical protein SSP0177 29 COG3875 COG3875, Uncharacterized conserved protein Function unknown 73661838 Common - ABC-type cobalamin Fe3+-siderophores transport system periplasmic component SSP0529 43 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 73663557 Common - hypothetical protein SSP2248 231 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 73662970 Common - hypothetical protein SSP1661 10 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 73663190 Pathogen - hypothetical protein SSP1881 1 None None None 73662285 Common - S-adenosylmethionine synthetase SSP0976 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 73661475 Common - putative permease of the major facilitator superfamily SSP0166 119 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663430 Common - mevalonate diphosphate decarboxylase SSP2121 27 COG3407 MVD1, Mevalonate pyrophosphate decarboxylase Lipid metabolism 73662249 Common - putative rRNA methylase SSP0940 157 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 73663719 Common - flavohemoprotein SSP2410 124 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 73662486 Common - chaperone protein dnaK SSP1177 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 73662453 Common - hypothetical protein SSP1144 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 73662680 Common - factor essential for methicillin resistance FEMA SSP1371 18 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 73663550 Common - dihydroneopterin aldolase SSP2241 111 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 73662977 Common - hypothetical protein SSP1668 7 COG3679 COG3679, Uncharacterized conserved protein Function unknown 73661767 Common - putative ABC-type nitrate sulfonate taurine bicarbonate transport system periplasmic component SSP0458 58 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 73661911 Common - hypothetical protein SSP0602 5 COG2427 COG2427, Uncharacterized conserved protein Function unknown 73663183 Common - OsmC-like protein SSP1874 90 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 73661842 Common - putative zinc-binding dehydrogenase SSP0533 174 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 73663085 Common - putative divalent cation transport protein SSP1776 170 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 73662700 Common - methionine sulfoxide reductase A SSP1391 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 73663217 Common - putative lipase SSP1908 52 COG1647 COG1647, Esterase/lipase General function prediction only 73662427 Common ruvB Holliday junction DNA helicase B SSP1118 234 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 73662690 Pathogen - hypothetical protein SSP1381 1 None None None 73661426 Common - hypothetical protein SSP0117 2 None None None 73663294 Common nrdF ribonucleotide-diphosphate reductase subunit beta SSP1985 133 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 73661648 Common - hypothetical protein SSP0339 14 COG0824 FcbC, Predicted thioesterase General function prediction only 73662741 Common - catalase SSP1432 125 COG0753 KatE, Catalase Inorganic ion transport and metabolism 73662332 Common murC UDP-N-acetylmuramate--L-alanine ligase SSP1023 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 73662507 Common - putative helicase SSP1198 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 73663213 Common - putative haloacid dehalogenase-like hydrolase SSP1904 108 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 73663444 Common - putative phosphomethylpyrimidine kinase SSP2135 215 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 73662403 Common hemC porphobilinogen deaminase SSP1094 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 73661424 Common - similar to ica operon transcriptional regulator IcaR SSP0115 67 COG1309 AcrR, Transcriptional regulator Transcription 73663576 Common - tetrapyrrole methylase family protein SSP2267 214 COG0313 COG0313, Predicted methyltransferases General function prediction only 73662645 Common - putative ABC transporter ATP-binding protein SSP1336 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73662502 Common - hypothetical protein SSP1193 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 73663198 Pathogen - hypothetical protein SSP1889 1 None None None 73662731 Common rpmG 50S ribosomal protein L33 SSP1422 92 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 73663489 Common - putative alpha-ketoglutarate permease SSP2180 61 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662746 Common - threonine synthase SSP1437 151 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 73662161 Common - hypothetical protein SSP0852 2 None None None 73662172 Pathogen - hypothetical protein SSP0863 1 None None None 73663661 Common - hypothetical protein SSP2352 9 COG4195 COG4195, Phage-related replication protein General function prediction only 73661389 Common - hypothetical protein SSP0080 56 COG0439 AccC, Biotin carboxylase Lipid metabolism 73662258 Pathogen - hypothetical protein SSP0949 1 None None None 73663157 Common - hypothetical protein SSP1848 3 None None None 73661920 Common - hypothetical protein SSP0611 26 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 73662780 Common - putative transcriptional regulator SSP1471 124 COG1959 COG1959, Predicted transcriptional regulator Transcription 73662180 Common - aldehyde dehydrogenase SSP0871 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73661878 Common - hypothetical protein SSP0569 2 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 73663065 Pathogen - hypothetical protein SSP1756 1 None None None 73663708 Pathogen - hypothetical protein SSP2399 1 None None None 73661617 Common - hypothetical protein SSP0308 41 COG4336 COG4336, Uncharacterized conserved protein Function unknown 73662244 Common - hypothetical protein SSP0935 15 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 73663668 Common - transcriptional regulator SSP2359 60 COG2808 PaiB, Transcriptional regulator Transcription 73662703 Common - ribose transport ATP-binding protein rbsA SSP1394 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 73663513 Common - hypothetical protein SSP2204 12 COG0645 COG0645, Predicted kinase General function prediction only 73661519 Common - putative inosine-uridine preferring nucleoside hydrolase SSP0210 80 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 73662869 Common - putative phosphopantothenoylcysteine synthetase decarboxylase SSP1560 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 73661864 Common - putative Mg2+ transporter protein SSP0555 186 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 73661447 Common - hypothetical protein SSP0138 29 COG1511 COG1511, Predicted membrane protein Function unknown 73661630 Common - hypothetical protein SSP0321 6 None None None 73662605 Pathogen - hypothetical protein SSP1296 1 None None None 73661624 Common - putative permease of the major facilitator superfamily SSP0315 115 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 73661983 Common rplX 50S ribosomal protein L24 SSP0674 214 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 73663144 Common - hypothetical protein SSP1835 167 COG0316 IscA, Uncharacterized conserved protein Function unknown 73661997 Common - 30S ribosomal protein S11 SSP0688 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 73662520 Common - putative Zn-dependent hydrolase SSP1211 218 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 73661636 Common - Drp35 SSP0327 34 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 73661329 Common - putative permease of the major facilitator superfamily SSP0020 175 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662422 Common - hypothetical protein SSP1113 15 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 73663137 Common - putative monovalent cation/H+ antiporter subunit F SSP1828 12 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 73663425 Common - putative acetyltransferase SSP2116 28 COG0456 RimI, Acetyltransferases General function prediction only 73662226 Common - hypothetical protein SSP0917 2 None None None 73663380 Common - ABC-type cobalamin Fe3+-siderophores transport system permease component SSP2071 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 73662687 Common - anthranilate synthase component II SSP1378 235 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 73661832 Common - putative transcriptional regulator of sugar metabolism SSP0523 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 73662479 Common - hypothetical protein SSP1170 121 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 73663126 Common - NAD-specific glutamate dehydrogenase SSP1817 180 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 73662076 Common - putative rRNA or tRNA methylase SSP0767 217 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 73662140 Common - putative DNA mismatch repair protein SSP0831 196 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 73662011 Pathogen - hypothetical protein SSP0702 1 None None None 73662695 Common - putative phosphoglycerate dehydrogenase SSP1386 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 73661320 Common - hypothetical protein SSP0011 10 COG4392 COG4392, Predicted membrane protein Function unknown 73662156 Common groES co-chaperonin GroES SSP0847 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 73663345 Pathogen - hypothetical protein SSP2036 1 None None None 73661672 Pathogen - putative truncated permease of the major facilitator superfamily SSP0363 1 None None None 73662985 Common - putative cell division protein SSP1676 206 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 73663006 Common - hypothetical protein SSP1697 36 None None None 73662998 Common - ABC-type spermidine putrescine transport system permease component I SSP1689 210 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 73661979 Common rplP 50S ribosomal protein L16 SSP0670 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 73661570 Common - urease accessory protein UreF SSP0261 82 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 73661718 Common - putative truncated transcriptional regulator SSP0409 3 None None None 73662817 Common - undecaprenyl pyrophosphate synthetase SSP1508 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 73662672 Common - ABC-type phosphate transport system permease component SSP1363 229 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 73663754 Common rnpA ribonuclease P SSP2445 106 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 73662854 Common - putative L-serine dehydratase beta subunit SSP1545 127 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 73661723 Common - putative truncated 2 deoxy-D-gluconate 3-dehydrogenase SSP0414 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73663106 Common - 3-oxoacyl-[acyl-carrier-protein] synthase II SSP1797 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73662309 Common - putative lysophospholipase SSP1000 38 COG2267 PldB, Lysophospholipase Lipid metabolism 73663457 Common - putative hexulose-6-phosphate synthase SSP2148 57 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 73661958 Common - hypothetical protein SSP0649 6 None None None 73663393 Pathogen - hypothetical protein SSP2084 1 None None None 73663200 Common - putative acetyltransferase SSP1891 72 COG2153 ElaA, Predicted acyltransferase General function prediction only 73662535 Common - elongation factor P SSP1226 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 73662215 Pathogen - hypothetical protein SSP0906 1 None None None 73663130 Common - putative peptidyl-prolyl cis-trans isomerase SSP1821 201 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 73663272 Common secA preprotein translocase subunit SecA SSP1963 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 73661510 Common - putative oxidoreductase SSP0201 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 73663055 Common - naphthoate synthase SSP1746 180 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 73661968 Common - DNA topoisomerase III SSP0659 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 73662835 Common rplS 50S ribosomal protein L19 SSP1526 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 73663511 Common - putative acetyltransferase SSP2202 100 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73661527 Common - putative truncated gluconate transporter SSP0218 79 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 73661888 Common - hypothetical protein SSP0579 2 COG3832 COG3832, Uncharacterized conserved protein Function unknown 73661612 Pathogen - hypothetical protein SSP0303 1 None None None 73662956 Common sdhA succinate dehydrogenase flavoprotein subunit SSP1647 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 73663037 Common - putative flavohemoprotein SSP1728 120 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 73661727 Pathogen - hypothetical protein SSP0418 1 None None None 73662194 Common - geranylgeranylglyceryl phosphate synthase-like protein SSP0885 27 COG1646 COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold General function prediction only 73662210 Pathogen - putative truncated transposase SSP0901 1 None None None 73663178 Common - glycine cleavage system protein H SSP1869 188 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 73661344 Common - cassette chromosome recombinase B SSP0035 147 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 73663687 Common - hypothetical protein SSP2378 6 COG5609 COG5609, Uncharacterized conserved protein Function unknown 73663385 Common - ABC-type transport system ATPase component SSP2076 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 73662071 Common - putative aldehyde dehydrogenase SSP0762 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73662368 Common - putative Xaa-Pro dipeptidase SSP1059 246 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 73663562 Common - transcription-repair coupling factor SSP2253 233 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 73662810 Common - hypothetical protein SSP1501 36 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 73663156 Common - hypothetical protein SSP1847 9 COG2445 COG2445, Uncharacterized conserved protein Function unknown 73661827 Common - putative Na+ Pi-cotransporter protein SSP0518 90 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 73662113 Common - hypothetical protein SSP0804 28 COG3428 COG3428, Predicted membrane protein Function unknown 73661352 Common - hypothetical protein SSP0043 18 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 73662313 Common - putative Fe-S oxidoreductase SSP1004 83 COG1242 COG1242, Predicted Fe-S oxidoreductase General function prediction only 73662713 Common - DNA topoisomerase IV subunit B SSP1404 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 73661937 Common - putative transcriptional regulator SSP0628 121 COG1609 PurR, Transcriptional regulators Transcription 73661348 Common - hypothetical protein SSP0039 8 None None None 73662208 Common - putative UDP-N-acetylmuramyl tripeptide synthase SSP0899 61 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 73662723 Pathogen - hypothetical protein SSP1414 1 None None None 73662491 Common - hypothetical protein SSP1182 12 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 73661468 Common - truncated biofilm-associated surface protein SSP0159 2 None None None 73662067 Common - CTP synthetase SSP0758 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 73662679 Common - FemB protein SSP1370 17 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 73663334 Common - hypothetical protein SSP2025 16 COG4330 COG4330, Predicted membrane protein Function unknown 73661497 Common - succinate-semialdehyde dehydrogenase SSP0188 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73662340 Common - truncated formyltetrahydrofolate synthetase SSP1031 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 73663373 Common - putative acetyltransferase SSP2064 43 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73662546 Common - putative dihydrolipoamide dehydrogenase SSP1237 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 73663671 Pathogen - hypothetical protein SSP2362 1 None None None 73661778 Common - hypothetical protein SSP0469 9 COG3819 COG3819, Predicted membrane protein Function unknown 73663015 Common - putative glutaredoxin SSP1706 3 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 73661713 Common - hypothetical protein SSP0404 7 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 73662636 Common - predicted transcriptional regulator SSP1327 79 COG1396 HipB, Predicted transcriptional regulators Transcription 73663376 Pathogen - hypothetical protein SSP2067 1 None None None 73662757 Common - ABC-type transport system permease component SSP1448 49 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 73663063 Common - putative general stress protein SSP1754 94 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 73663615 Common - putative truncated ABC transporter permease SSP2306 76 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 73663316 Common - glutamine amidotransferase class-I protein SSP2007 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 73662106 Pathogen - hypothetical protein SSP0797 1 None None None 73661449 Pathogen - hypothetical protein SSP0140 1 COG3476 COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) Signal transduction mechanisms 73662577 Common - L-asparaginase SSP1268 136 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 73662582 Common - bacterial nucleoid DNA-binding protein HU SSP1273 212 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 73661394 Common - truncated transcriptional regulator SSP0085 83 COG0583 LysR, Transcriptional regulator Transcription 73661822 Common - putative cationic transporter SSP0513 28 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 73663115 Common - fumarylacetoacetate hydrolase family protein SSP1806 178 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 73662821 Common rpsB 30S ribosomal protein S2 SSP1512 246 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 73662016 Common - hypothetical protein SSP0707 42 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 73661585 Common - putative hydrolase SSP0276 106 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73661702 Common - putative phospholipase SSP0393 31 COG0400 COG0400, Predicted esterase General function prediction only 73661503 Common - putative transcriptional regulator SSP0194 18 COG1510 COG1510, Predicted transcriptional regulators Transcription 73663379 Common - putative dihydroxyacetone kinase SSP2070 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 73663596 Common - hypothetical protein SSP2287 32 COG5438 COG5438, Predicted multitransmembrane protein Function unknown 73661673 Common - putative truncated permease of the major facilitator superfamily SSP0364 23 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 73662132 Common - acetolactate synthase small subunit SSP0823 156 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 73661538 Common - hypothetical protein SSP0229 5 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 73662044 Common - Co Zn Cd efflux system component SSP0735 192 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 73663449 Common - putative Na+-driven multidrug efflux pump SSP2140 157 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 73663028 Common - phosphoribosylaminoimidazole synthetase SSP1719 233 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 73663527 Common rplK 50S ribosomal protein L11 SSP2218 247 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 73662849 Common - fatty acid/phospholipid synthesis protein SSP1540 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 73663244 Pathogen - hypothetical protein SSP1935 1 None None None 73662799 Common - putative hydrolase SSP1490 149 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 73663301 Pathogen - hypothetical protein SSP1992 1 None None None 73662326 Common - hypothetical protein SSP1017 2 COG5584 COG5584, Predicted small secreted protein Function unknown 73663634 Common - xanthine phosphoribosyltransferase SSP2325 51 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 73662505 Common - putative methyltransferase SSP1196 30 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 73661815 Pathogen - hypothetical protein SSP0506 1 None None None 73662251 Pathogen - hypothetical protein SSP0942 1 None None None 73662462 Common - putative allophanate hydrolase subunit 1 SSP1153 98 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 73663320 Pathogen - hypothetical protein SSP2011 1 None None None 73662231 Common - putative ABC-type polysaccharide polyol phosphate transport system ATPase component SSP0922 211 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73661745 Common - short chain dehydrogenase SSP0436 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73663678 Pathogen - hypothetical protein SSP2369 1 None None None 73661380 Common - truncated capsular polysaccharide synthesis protein SSP0071 44 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 73662034 Common - mannitol-1-phosphate 5-dehydrogenase SSP0725 84 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 73662874 Common - hypothetical protein SSP1565 47 COG1284 COG1284, Uncharacterized conserved protein Function unknown 73663255 Common - hypothetical protein SSP1946 4 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 73663238 Pathogen - hypothetical protein SSP1929 1 None None None 73662585 Common - putative heptaprenyl diphosphate syntase component II SSP1276 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 73661403 Common - transcriptional regulator SSP0094 23 COG1309 AcrR, Transcriptional regulator Transcription 73663231 Pathogen - hypothetical protein SSP1922 1 None None None 73661684 Common - N-acetylneuraminate lyase SSP0375 233 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 73662883 Common - pyrimidine regulatory protein PyrR SSP1574 114 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 73663206 Common - hypothetical protein SSP1897 11 None None None 73662115 Common - phosphopantetheinyl transferase SSP0806 155 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 73662276 Common - protoporphyrinogen oxidase SSP0967 67 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 73663699 Pathogen - hypothetical protein SSP2390 1 None None None 73662900 Common - putative cell division protein SSP1591 3 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 73662110 Common - UDP-N-acetylmuramyl pentapeptide synthase SSP0801 213 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 73661414 Common - beta-D-galactosidase SSP0105 68 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 73662051 Pathogen - hypothetical protein SSP0742 1 COG2947 COG2947, Uncharacterized conserved protein Function unknown 73663706 Common - putative methyltransferase SSP2397 44 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 73662073 Common rpmE2 50S ribosomal protein L31 type B SSP0764 146 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 73663578 Common - putative methyltransferase SSP2269 96 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 73662554 Common - transcriptional regulator SSP1245 127 COG1609 PurR, Transcriptional regulators Transcription 73661740 Pathogen hisZ ATP phosphoribosyltransferase regulatory subunit SSP0431 1 None None None 73661416 Common - putative glucosyl transferase SSP0107 184 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73662748 Common - aspartate kinase SSP1439 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 73662039 Common - hypothetical protein SSP0730 24 COG4898 COG4898, Uncharacterized protein conserved in bacteria Function unknown 73662727 Common - LexA repressor SSP1418 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 73662797 Common - putative transcriptional regulator SSP1488 46 COG2188 PhnF, Transcriptional regulators Transcription 73663330 Common - UTP-glucose-1-phosphate uridyltransferase SSP2021 234 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 73662065 Common - putative acetyltransferase SSP0756 9 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73662299 Common - putative truncated transposase SSP0990 3 None None None 73662907 Pathogen - putative antibacterial protein SSP1598 1 None None None 73663555 Common - putative hypoxanthine-guanine phosphoribosyltransferase SSP2246 157 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 73663480 Common - putative D-serine D-alanine glycine transporter SSP2171 121 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 73663607 Common - putative Na+-dependent transporter of the SNF family SSP2298 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 73663600 Common - hypothetical protein SSP2291 87 COG3942 COG3942, Surface antigen General function prediction only 73662448 Common - putative cysteine desulfurase SSP1139 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 73661884 Common - putative amino acid amidohydrolase SSP0575 170 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 73661319 Common - putative branched-chain amino acid permease SSP0010 110 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 73662139 Common - hypothetical protein SSP0830 8 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 73662294 Pathogen - hypothetical protein SSP0985 1 None None None 73663537 Common - glutamyl-tRNA synthetase SSP2228 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 73662534 Common - putative peptidase SSP1225 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 73662767 Common - putative lysophospholipase SSP1458 83 COG2267 PldB, Lysophospholipase Lipid metabolism 73663572 Common ksgA dimethyladenosine transferase SSP2263 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 73663280 Common - hypothetical protein SSP1971 23 COG2966 COG2966, Uncharacterized conserved protein Function unknown 73663587 Common - DNA polymerase III gamma and tau subunits SSP2278 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 73661668 Common - ABC-type cobalt transport system permease component SSP0359 25 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 73663182 Common - putative 3-dehydroquinate dehydratase SSP1873 49 COG0710 AroD, 3-dehydroquinate dehydratase Amino acid transport and metabolism 73662734 Common - ABC-type phosphate phosphonate transport system permease component SSP1425 131 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 73663717 Common - sulfite reductase flavoprotein subunit SSP2408 103 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 73662493 Pathogen - hypothetical protein SSP1184 1 None None None 73662048 Common - putative mannose-6-phosphate isomerase SSP0739 49 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 73662634 Common kgd alpha-ketoglutarate decarboxylase SSP1325 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 73663479 Common - hypothetical protein SSP2170 5 COG3832 COG3832, Uncharacterized conserved protein Function unknown 73661913 Common - putative glucosaminidase SSP0604 6 COG4193 LytD, Beta- N-acetylglucosaminidase Carbohydrate transport and metabolism 73661776 Common - hypothetical protein SSP0467 4 COG3152 COG3152, Predicted membrane protein Function unknown 73661922 Common - putative secretory antigen precursor SSP0613 7 COG3942 COG3942, Surface antigen General function prediction only 73663490 Common - transcriptional regulator SSP2181 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 73661972 Common rplC 50S ribosomal protein L3 SSP0663 236 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 73661918 Common - putative secretory antigen precursor SSP0609 7 COG3942 COG3942, Surface antigen General function prediction only 73662591 Common - hypothetical protein SSP1282 3 COG5582 COG5582, Uncharacterized conserved protein Function unknown 73663411 Common - hypothetical protein SSP2102 6 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 73662776 Common - hypothetical protein SSP1467 9 COG4550 COG4550, Predicted membrane protein Function unknown 73662786 Common - hypothetical protein SSP1477 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 73661688 Common - putative flavin oxidoreductase SSP0379 95 COG0778 NfnB, Nitroreductase Energy production and conversion 73662168 Pathogen - hypothetical protein SSP0859 1 None None None 73663303 Common - hypothetical protein SSP1994 8 COG4502 COG4502, Uncharacterized protein conserved in bacteria Function unknown 73662058 Common - phosphopentomutase SSP0749 71 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 73661422 Pathogen - hypothetical protein SSP0113 1 None None None 73663547 Common - transcriptional regulator SSP2238 169 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 73662718 Common - glycine betaine transporter SSP1409 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 73663647 Common - hypothetical protein SSP2338 2 None None None 73661849 Common - signal transduction histidine kinase SSP0540 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 73661436 Common - hypothetical protein SSP0127 112 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 73663658 Common - hypothetical protein SSP2349 21 COG1959 COG1959, Predicted transcriptional regulator Transcription 73661677 Common - succinyl-diaminopimelate desuccinylase SSP0368 207 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 73662121 Common - serine-protein kinase RsbW SSP0812 22 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 73661925 Pathogen - staphylococcal accessory regulator R SSP0616 2 COG1846 MarR, Transcriptional regulators Transcription 73663296 Common nrdI ribonucleotide reductase stimulatory protein SSP1987 39 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 73663651 Common - putative truncated membrane transporter of cations and cationic drugs SSP2342 118 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 73662647 Pathogen - hypothetical protein SSP1338 1 None None None 73663569 Common - purine operon repressor SSP2260 29 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 73663735 Common - putative acyl-CoA synthetase SSP2426 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73663141 Common - putative permease SSP1832 40 COG2056 COG2056, Predicted permease General function prediction only 73661751 Common - hypothetical protein SSP0442 70 COG0390 COG0390, ABC-type uncharacterized transport system, permease component General function prediction only 73663270 Common - hypothetical protein SSP1961 8 COG3942 COG3942, Surface antigen General function prediction only 73662699 Common - peptide methionine sulfoxide reductase regulator MsrR SSP1390 63 COG1316 LytR, Transcriptional regulator Transcription 73663497 Pathogen - hypothetical protein SSP2188 1 None None None 73663108 Pathogen - hypothetical protein SSP1799 1 None None None 73663269 Common - putative phosphohydrolase SSP1960 30 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 73663403 Common - putative monovalent cation/H+ antiporter subunit C SSP2094 104 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 73661781 Common - putative acetyltransferase SSP0472 22 COG0456 RimI, Acetyltransferases General function prediction only 73662692 Pathogen - hypothetical protein SSP1383 1 None None None 73661691 Common - putative truncated beta-glucoside operon antiterminator SSP0382 19 None None None 73663215 Common smpB SsrA-binding protein SSP1906 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 73662406 Common - glutamate-1-semialdehyde aminotransferase SSP1097 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 73663475 Common - transcriptional regulator SSP2166 192 COG0583 LysR, Transcriptional regulator Transcription 73662813 Common - DNA polymerase III alpha chain PolC-type SSP1504 220 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 73662163 Pathogen - hypothetical protein SSP0854 1 None None None 73663253 Common - putative prophage antirepressor SSP1944 25 COG3617 COG3617, Prophage antirepressor Transcription 73662615 Common - putative esterase SSP1306 17 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 73662803 Common - tRNA pseudouridine 5S synthase SSP1494 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 73661894 Common - putative sodium-dependent transporter SSP0585 123 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 73663043 Pathogen - hypothetical protein SSP1734 1 None None None 73661456 Common - putative dioxygenase SSP0147 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73663529 Pathogen secE preprotein translocase subunit SecE SSP2220 1 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 73661461 Common - hypothetical protein SSP0152 9 None None None 73661956 Common - putative permease of the major facilitator superfamily SSP0647 34 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73661600 Common - putative 6-pyruvoyl tetrahydrobiopterin synthase SSP0291 12 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 73662960 Common - recombination and DNA strand exchange inhibitor protein SSP1651 201 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 73663745 Common - hypothetical protein SSP2436 2 None None None 73663524 Common rplL 50S ribosomal protein L7/L12 SSP2215 212 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 73663663 Common - hypothetical protein SSP2354 6 COG2128 COG2128, Uncharacterized conserved protein Function unknown 73662345 Common - putative 1-acyl-sn-glycerol-3-phosphate acyltransferase SSP1036 119 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 73663367 Common - secretory antigen SsaA-like protein SSP2058 33 COG3942 COG3942, Surface antigen General function prediction only 73662793 Common - hypothetical protein SSP1484 5 None None None 73661843 Common - putative acetyltransferase SSP0534 34 COG0456 RimI, Acetyltransferases General function prediction only 73663400 Common - putative monovalent cation/H+ antiporter subunit F SSP2091 22 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 73663710 Common - putative adenylylsulfate kinase SSP2401 144 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 73662242 Common - aspartate alpha-decarboxylase SSP0933 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 73663369 Common - hypothetical protein SSP2060 69 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 73663450 Common - transcriptional regulator SSP2141 7 COG1846 MarR, Transcriptional regulators Transcription 73663360 Common - hypothetical protein SSP2051 7 COG2306 COG2306, Uncharacterized conserved protein Function unknown 73662944 Common - transcriptional regulator SSP1635 118 COG1846 MarR, Transcriptional regulators Transcription 73663001 Common - hypothetical protein SSP1692 11 COG4476 COG4476, Uncharacterized protein conserved in bacteria Function unknown 73661711 Common - hypothetical protein SSP0402 40 COG1359 COG1359, Uncharacterized conserved protein Function unknown 73662979 Common - putative truncated excinuclease ABC subunit A SSP1670 227 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 73663564 Common - 50S ribosomal protein L25/general stress protein Ctc SSP2255 172 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 73662972 Common - putative phosphopantetheine adenyltransferase SSP1663 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 73662222 Common - hypothetical protein SSP0913 3 COG4840 COG4840, Uncharacterized protein conserved in bacteria Function unknown 73662566 Common - hypothetical protein SSP1257 141 COG1354 COG1354, Uncharacterized conserved protein Function unknown 73661756 Common - putative transcriptional regulator SSP0447 53 COG1309 AcrR, Transcriptional regulator Transcription 73662304 Common - riboflavin specific deaminase SSP0995 225 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 73661871 Common - hypothetical protein SSP0562 41 COG3152 COG3152, Predicted membrane protein Function unknown 73662091 Common - F0F1-type ATP synthase epsilon subunit SSP0782 149 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 73663750 Common - putative transcriptional regulator SSP2441 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 73663189 Common - hypothetical protein SSP1880 18 COG2314 XynA, Predicted membrane protein Function unknown 73663211 Common - hypothetical protein SSP1902 22 None None None 73662374 Common - NAD-dependent malic enzyme SSP1065 202 COG0281 SfcA, Malic enzyme Energy production and conversion 73662265 Common - hypothetical protein SSP0956 102 COG4717 COG4717, Uncharacterized conserved protein Function unknown 73661762 Common - periplasmic glycine betaine choline-binding protein of an ABC-type transport system SSP0453 89 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 73661568 Common - urease accessory protein UreD SSP0259 54 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 73662451 Common - ATP-dependent exonuclease V alpha subunit SSP1142 138 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 73663462 Pathogen - putative transcriptional regulator sarA paralog SSP2153 1 COG1846 MarR, Transcriptional regulators Transcription 73663362 Common - hypothetical protein SSP2053 57 COG3542 COG3542, Uncharacterized conserved protein Function unknown 73662405 Common - delta-aminolevulinic acid dehydratase SSP1096 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 73661707 Common - fructose-bisphosphatase SSP0398 18 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 73663469 Common - putative phosphatase SSP2160 117 COG0546 Gph, Predicted phosphatases General function prediction only 73663355 Common - hypothetical protein SSP2046 4 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 73663192 Pathogen - hypothetical protein SSP1883 1 None None None 73662378 Common - pyruvate kinase SSP1069 234 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 73662347 Common - hypothetical protein SSP1038 6 COG0546 Gph, Predicted phosphatases General function prediction only 73662098 Common - putative transcriptional regulator SSP0789 51 COG0819 TenA, Putative transcription activator Transcription 73662456 Common - putative O-methyltransferase SSP1147 114 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 73663692 Common - putative arsenical pump membrane protein SSP2383 141 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 73663627 Pathogen - hypothetical protein SSP2318 1 None None None 73663729 Common - hypothetical protein SSP2420 5 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 73662014 Common - hypothetical protein SSP0705 48 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 73661445 Pathogen - hypothetical protein SSP0136 3 None None None 73661732 Common - histidine biosynthesis bifunctional protein HisIE SSP0423 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 73663455 Common - putative acyl-CoA synthetase AMP-acid ligase II SSP2146 208 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73663083 Common - enoyl-(acyl carrier protein) reductase SSP1774 230 COG0623 FabI, Enoyl- acyl-carrier-protein 73663516 Common - elongation factor Tu SSP2207 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 73663554 Common - ATP-dependent Zn metallopeptidase SSP2245 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 73662913 Common - putative transcriptional regulator SSP1604 58 COG0640 ArsR, Predicted transcriptional regulators Transcription 73662958 Common uvrC excinuclease ABC subunit C SSP1649 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 73662537 Common - acetyl-CoA carboxylase biotin carboxylase subunit SSP1228 234 COG0439 AccC, Biotin carboxylase Lipid metabolism 73662658 Common - cold shock protein SSP1349 181 COG1278 CspC, Cold shock proteins Transcription 73662361 Common - putative peroxiredoxin SSP1052 119 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 73661945 Common - putative transcriptional regulator SSP0636 32 COG1510 COG1510, Predicted transcriptional regulators Transcription 73663113 Common - coenzyme A disulfide reductase SSP1804 239 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 73662541 Common - exodeoxyribonuclease small subunit SSP1232 97 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 73663532 Common - hypothetical protein SSP2223 30 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 73662123 Common - truncated RNA polymerase sigma-B factor SSP0814 209 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 73662624 Common - methionine sulfoxide reductase A SSP1315 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 73663540 Common - putative stress response-related Clp ATPase SSP2231 237 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 73662400 Common - GTPase EngB SSP1091 194 COG0218 COG0218, Predicted GTPase General function prediction only 73661619 Common - similar to intercellular adhesion protein C SSP0310 5 COG3936 COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation Carbohydrate transport and metabolism 73661346 Pathogen - hypothetical protein SSP0037 1 None None None 73663685 Common - hypothetical protein SSP2376 26 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 73662078 Common - putative low molecular weight protein-tyrosine-phosphatase SSP0769 61 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 73663091 Common - putative hemoglobin-like protein SSP1782 67 COG2346 COG2346, Truncated hemoglobins General function prediction only 73663154 Common - putative dehydrogenase SSP1845 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 73661454 Common - putative anaerobic ribonucleotide reductase activating protein SSP0145 56 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 73662147 Common - putative fructokinase SSP0838 194 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 73662260 Common - putative formyltetrahydrofolate hydrolase SSP0951 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 73661862 Pathogen - hypothetical protein SSP0553 1 None None None 73663500 Common - hypothetical protein SSP2191 19 None None None 73661342 Pathogen - hypothetical protein SSP0033 1 None None None 73663098 Common - tryptophanyl-tRNA synthetase SSP1789 224 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663057 Common - menaquinone biosynthesis bifunctional protein SSP1748 94 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 73661338 Common - putative modification methylase SSP0029 43 COG1041 COG1041, Predicted DNA modification methylase DNA replication, recombination, and repair 73663136 Common - putative monovalent cation/H+ antiporter subunit E SSP1827 93 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 73663441 Common - hypothetical protein SSP2132 66 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 73662951 Common - probable truncated integrase SSP1642 77 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 73661988 Common rplR 50S ribosomal protein L18 SSP0679 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 73662202 Common - putative lipid kinase SSP0893 122 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 73663030 Common - phosphoribosylformylglycinamidine synthase synthetase domain SSP1721 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 73663045 Common - autolysis and methicillin resistant-related protein SSP1736 91 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 73662142 Common - redox-sensing transcriptional repressor Rex SSP0833 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 73662415 Pathogen - hypothetical protein SSP1106 1 None None None 73662760 Common - glutamine synthase SSP1451 228 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 73661764 Common - putative esterase SSP0455 27 COG0627 COG0627, Predicted esterase General function prediction only 73662228 Common - monofunctional glycosyltransferase SSP0919 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 73661556 Common - putative metal-dependent membrane protease SSP0247 7 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 73661960 Common - peptidoglycan pentaglycine interpeptide biosynthesis protein SSP0651 27 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 73661626 Pathogen - hypothetical protein SSP0317 1 None None None 73661948 Common moaC molybdenum cofactor biosynthesis protein C SSP0639 194 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 73662477 Common - putative DNA uptake protein and related DNA-binding protein SSP1168 132 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 73661852 Common - ABC-type transport system involved in lipoprotein release ATPase component SSP0543 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 73661794 Common - putative permease of the major facilitator superfamily SSP0485 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73661737 Common - putative histidinol-phosphate aminotransferase SSP0428 225 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 73663439 Common - transcriptional regulator SSP2130 21 COG1846 MarR, Transcriptional regulators Transcription 73662999 Common - ABC-type spermidine putrescine transport system ATPase component SSP1690 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 73662856 Common - hypothetical protein SSP1547 33 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 73662247 Common - ABC-type polar amino acid transport system ATPase component SSP0938 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 73663124 Common - argininosuccinate lyase SSP1815 238 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 73661716 Common - hypothetical protein SSP0407 66 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 73661330 Common - response regulator SSP0021 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 73661634 Common - acetyl-CoA acetyltransferase SSP0325 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 73661333 Common - hypothetical protein SSP0024 7 COG4853 COG4853, Uncharacterized protein conserved in bacteria Function unknown 73662895 Common - cell division protein SSP1586 177 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 73662391 Common - threonyl-tRNA synthetase SSP1082 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73662994 Common - putative manganese transport protein SSP1685 104 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 73662996 Common - spermidine putrescine-binding periplasmic protein SSP1687 133 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 73663233 Common - putative aminoglycoside adenyltransferase SSP1924 10 None None None 73662819 Common - uridylate kinase SSP1510 242 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 73662670 Common - ABC-type phosphate transport system periplasmic component SSP1361 144 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 73662006 Common - hypothetical protein SSP0697 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 73663598 Common - hypothetical protein SSP2289 33 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 73661645 Common - glucose-specific PTS transporter protein IIABC component SSP0336 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73662046 Common - hypothetical protein SSP0737 63 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 73662516 Common - hypothetical protein SSP1207 148 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 73661484 Common - putative NCAIR mutase SSP0175 70 COG1691 COG1691, NCAIR mutase (PurE)-related proteins General function prediction only 73663039 Common - quinol oxidase polypeptide II SSP1730 116 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 73661743 Common - exopolyphosphatase SSP0434 179 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 73662526 Common - putative shikimate kinase SSP1217 200 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 73661675 Common - sorbitol dehydrogenase SSP0366 216 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 73662389 Common - chromosome replication initiation membrane attachment protein SSP1080 17 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 73663026 Common - phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase SSP1717 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 73663282 Common - peptidase T SSP1973 60 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 73662697 Common - putative DNA-damage repair protein SSP1388 178 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 73661371 Common - capsular polysaccharide biosynthesis protein SSP0062 40 COG4464 CapC, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73661516 Common - putative truncated permease of the major facilitator superfamily SSP0207 43 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 73663246 Pathogen - hypothetical protein SSP1937 1 None None None 73663322 Common - putative glucosyl transferase SSP2013 181 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73661358 Common - hypothetical protein SSP0049 4 COG4333 COG4333, Uncharacterized protein conserved in bacteria Function unknown 73662587 Common - chorismate synthase SSP1278 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 73662660 Common - alanine racemase 2 SSP1351 175 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 73662032 Common - hypothetical protein SSP0723 16 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 73662396 Common - hypothetical protein SSP1087 8 COG4112 COG4112, Predicted phosphoesterase (MutT family) General function prediction only 73662470 Common - putative GTPase SSP1161 64 COG1161 COG1161, Predicted GTPases General function prediction only 73661905 Common - hypothetical protein SSP0596 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 73662824 Common - ATP-dependent protease peptidase subunit SSP1515 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 73661995 Common - 50S ribosomal protein L36 SSP0686 137 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 73663152 Common - D-alanine--D-alanyl carrier protein ligase SSP1843 183 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 73663724 Common - bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein SSP2415 177 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 73662715 Common - hypothetical protein SSP1406 7 COG4841 COG4841, Uncharacterized protein conserved in bacteria Function unknown 73662607 Common - putative cell division initiation protein SSP1298 6 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 73662876 Common - orotate phosphoribosyltransferase SSP1567 169 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 73662134 Common - dihydroxy-acid dehydratase SSP0825 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 73662812 Common - hypothetical protein SSP1503 173 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 73662721 Common - putative exonuclease SSP1412 123 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 73663416 Common - putative hydrolase SSP2107 170 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 73661466 Common - hypothetical protein SSP0157 2 None None None 73663649 Common - hypothetical protein SSP2340 46 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 73663194 Pathogen - hypothetical protein SSP1885 1 None None None 73662775 Common - hypothetical protein SSP1466 16 COG4732 COG4732, Predicted membrane protein Function unknown 73662667 Common - putative aldo keto reductase SSP1358 172 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 73661981 Common rpsQ 30S ribosomal protein S17 SSP0672 228 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 73662460 Common - transcription elongation factor SSP1151 204 COG0782 GreA, Transcription elongation factor Transcription 73661704 Common - putative di- and tricarboxylate transporter SSP0395 98 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 73663731 Common - hypothetical protein SSP2422 8 None None None 73663371 Common - response regulator SSP2062 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 73661820 Pathogen - hypothetical protein SSP0511 2 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 73663293 Common - putative ABC-type cobalamin Fe3+-siderophores transport system permease component SSP1984 187 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 73662759 Pathogen - hypothetical protein SSP1450 1 None None None 73663618 Common - truncated transcriptional regulator SSP2309 7 None None None 73663059 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase SSP1750 99 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 73663336 Common - malate dehydrogenase SSP2027 205 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 73663073 Common - putative toxic anion resistance protein SSP1764 33 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 73662469 Common - hypothetical protein SSP1160 44 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 73662584 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase SSP1275 228 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 73663312 Common - putative allophanate hydrolase subunit 1 SSP2003 94 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 73663505 Common - ornithine cyclodeaminase SSP2196 101 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 73661401 Common - NAD-dependent deacetylase SSP0092 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 73661508 Common - hypothetical protein SSP0199 75 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 73661558 Common - lactate dehydrogenase SSP0249 163 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 73661591 Common - glutamyl endopeptidase precursor SSP0282 18 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 73662154 Common - hypothetical protein SSP0845 26 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73661495 Common - putative transcriptional regulator SSP0186 168 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 73663347 Common - hypothetical protein SSP2038 86 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 73662685 Common - indole-3-glycerol phosphate synthase SSP1376 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 73663613 Pathogen - hypothetical protein SSP2304 1 None None None 73663350 Common - putative bifunctional protein: transcriptional regulator; aminotransferase SSP2041 217 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 73662385 Common - putative formamidopyrimidine-DNA glycosylase SSP1076 178 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 73661698 Common - putative aldehyde dehydrogenase SSP0389 223 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73661392 Common - alpha-acetolactate decarboxylase SSP0083 40 COG3527 AlsD, Alpha-acetolactate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 73663318 Common - putative 6-pyruvoyl tetrahydropterin synthase SSP2009 108 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 73662750 Pathogen - hypothetical protein SSP1441 1 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 73663391 Common - teichoic acid ABC transporter ATP-binding protein SSP2082 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73662938 Common - putative aldehyde dehydrogenase SSP1629 225 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73661564 Common - putative truncated sugar phosphate permease SSP0255 76 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 73661845 Common - putative glycosyl glycerophosphate transferase involved in teichoic acid biosynthesis SSP0536 27 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 73662962 Common - hypothetical protein SSP1653 8 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 73661834 Common - dihydroxyacetone kinase SSP0525 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 73662632 Common - response regulator ArlR SSP1323 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 73661763 Common - ABC-type proline glycine betaine transport system permease component SSP0454 144 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 73662860 Common - putative GTPase SSP1551 163 COG1162 COG1162, Predicted GTPases General function prediction only 73661949 Common - molybdopterin biosynthesis protein SSP0640 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 73663225 Common - glyceraldehyde-3-phosphate dehydrogenase SSP1916 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 73663736 Common - putative acetyl-CoA transferase SSP2427 55 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 73662262 Common - hypothetical protein SSP0953 25 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 73663003 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 SSP1694 196 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 73662372 Common - hypothetical protein SSP1063 84 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 73661463 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase SSP0154 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 73662564 Common - site-specific recombinase SSP1255 231 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 73662732 Common - transposase SSP1423 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 73662816 Common - phosphatidate cytidylyltransferase SSP1507 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 73663741 Common - putative amino acid transporter SSP2432 178 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 73663507 Common - 3-hydroxybutyrate dehydrogenase SSP2198 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73661644 Common - transposase SSP0335 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 73663666 Common - putative extracellular amidase SSP2357 99 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 73661666 Common - putative glycosyltransferase SSP0357 187 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73662101 Common - thiamine monophosphate synthase SSP0792 204 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 73663276 Common - hypothetical protein SSP1967 55 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 73663088 Common - hypothetical protein SSP1779 75 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 73663364 Pathogen - hypothetical protein SSP2055 1 None None None 73661895 Common - putative phosphatase phosphohexomutase SSP0586 193 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 73663624 Common - hypothetical protein SSP2315 15 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73661754 Common - hypothetical protein SSP0445 11 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 73662648 Common - hypothetical protein SSP1339 18 None None None 73662223 Common - leucyl aminopeptidase SSP0914 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 73662454 Common - putative endonuclease involved in recombination SSP1145 159 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 73662711 Common - Na+ alanine symporter SSP1402 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 73663753 Common trmE tRNA modification GTPase TrmE SSP2444 231 COG0486 ThdF, Predicted GTPase General function prediction only 73661639 Common - putative transcriptional regulator SSP0330 191 COG0583 LysR, Transcriptional regulator Transcription 73661566 Common - hypothetical protein SSP0257 28 COG0824 FcbC, Predicted thioesterase General function prediction only 73663696 Pathogen - hypothetical protein SSP2387 1 COG3152 COG3152, Predicted membrane protein Function unknown 73663467 Common - putative deoxyadenosine kinase SSP2158 40 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 73661451 Common - putative permease SSP0142 46 COG0679 COG0679, Predicted permeases General function prediction only 73663257 Common - hypothetical protein SSP1948 11 None None None 73661625 Common - putative metal-dependent amidase SSP0316 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 73661734 Common - putative phosphoribosylformimino-5- aminoimidazole carboxamide ribotide isomerase SSP0425 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 73662612 Common - hypothetical protein SSP1303 39 COG1160 COG1160, Predicted GTPases General function prediction only 73662317 Common - putative flavoprotein SSP1008 144 COG2081 COG2081, Predicted flavoproteins General function prediction only 73662865 Common - methionyl-tRNA formyltransferase SSP1556 224 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 73662504 Common - RNA polymerase sigma factor RpoD SSP1195 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 73662641 Common - hypothetical protein SSP1332 11 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 73662742 Common - amino acid transporter SSP1433 100 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 73662053 Common - ribokinase SSP0744 211 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 73661489 Common - pyruvate phosphate dikinase SSP0180 234 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 73662946 Common - putative truncated glutathione peroxidase SSP1637 109 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 73661534 Common - hypothetical protein SSP0225 7 COG5562 COG5562, Phage envelope protein General function prediction only 73662026 Common - hypothetical protein SSP0717 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 73661376 Common - putative glycosyl transferase SSP0067 11 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 73663495 Common - similar to beta-lactamase precursor SSP2186 55 COG2367 PenP, Beta-lactamase class A Defense mechanisms 73662808 Common infB translation initiation factor IF-2 SSP1499 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 73661783 Common - truncated lipoprotein precursor SSP0474 2 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 73663460 Common - hypothetical protein SSP2151 55 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 73661550 Common - phosphotransferase system cellobiose-specific component IIA SSP0241 30 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 73662968 Common - hypothetical protein SSP1659 84 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 73662784 Common - 2-oxoglutarate ferredoxin oxidoreductase subunit beta SSP1475 109 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 73663402 Common - putative monovalent cation/H+ antiporter subunit D SSP2093 209 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 73662925 Pathogen - hypothetical protein SSP1616 1 None None None 73662739 Pathogen - hypothetical protein SSP1430 1 None None None 73661963 Common - hypothetical protein SSP0654 2 None None None 73663329 Common - hypothetical protein SSP2020 115 COG2606 EbsC, Uncharacterized conserved protein Function unknown 73663046 Common - putative phosphomannomutase SSP1737 238 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 73663582 Common - hypothetical protein SSP2273 20 COG3870 COG3870, Uncharacterized protein conserved in bacteria Function unknown 73661433 Common - putative phosphotransferase system IIA component SSP0124 53 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 73663266 Common - HPr kinase/phosphorylase SSP1957 64 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 73663705 Common - putative phospholipid phosphatase SSP2396 5 None None None 73661792 Common - putative phosphoglycerate mutase SSP0483 155 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 73661914 Common - hypothetical protein SSP0605 72 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 73663533 Common - SpoU rRNA Methylase family protein SSP2224 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 73661421 Common - putative transcriptional regulator SSP0112 29 COG1476 COG1476, Predicted transcriptional regulators Transcription 73662298 Common - transposase SSP0989 132 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 73661800 Common - hypothetical protein SSP0491 113 COG2353 COG2353, Uncharacterized conserved protein Function unknown 73662369 Common - hypothetical protein SSP1060 96 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 73662283 Common - putative peptidase SSP0974 13 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 73663588 Common - putative acetyltransferase SSP2279 90 COG3153 COG3153, Predicted acetyltransferase General function prediction only 73661597 Common - putative peptidase SSP0288 180 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 73661854 Common - putative transcriptional regulator SSP0545 11 COG1846 MarR, Transcriptional regulators Transcription 73663392 Common - teichoic acid biosynthesis protein SSP2083 108 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 73662174 Common - hypothetical protein SSP0865 4 COG3595 COG3595, Uncharacterized conserved protein Function unknown 73663653 Pathogen - hypothetical protein SSP2344 1 None None None 73663481 Common mmuM homocysteine methyltransferase SSP2172 163 COG2040 MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Amino acid transport and metabolism 73661659 Common - poly-gamma-glutamate synthesis protein PgsA SSP0350 28 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 73661935 Common - hypothetical protein SSP0626 3 None None None 73662639 Common - truncated transcriptional regulator SSP1330 2 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 73661474 Common - hypothetical protein SSP0165 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 73662096 Common - putative single strand DNA binding protein SSP0787 102 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 73661887 Common - putative Na+ H+ antiporter SSP0578 70 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 73663641 Common - putative transcriptional regulator SSP2332 29 COG1476 COG1476, Predicted transcriptional regulators Transcription 73661873 Common - ABC-type multidrug transport system ATPase component SSP0564 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 73661951 Common - molybdopterin converting factor large subunit SSP0642 150 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 73662353 Common rpsD 30S ribosomal protein S4 SSP1044 239 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 73662085 Common - F0F1 ATP synthase subunit C SSP0776 15 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 73661443 Common - ABC-type multidrug transport system permease component SSP0134 132 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 73662592 Common - hypothetical protein SSP1283 16 COG4347 COG4347, Predicted membrane protein Function unknown 73662758 Common - ABC-type transport system ATPase component SSP1449 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73662905 Common - putative hydrolase SSP1596 65 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 73661540 Common - putative permease of the major facilitator superfamily SSP0231 30 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 73662556 Common - transcriptional regulator SSP1247 69 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73662859 Common - putative ribulose-phosphate 3-epimerase SSP1550 218 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 73662292 Common - hypothetical protein SSP0983 34 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 73662846 Common - acyl carrier protein SSP1537 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73661652 Common - putative truncated permease of the drug metabolite transporter SSP0343 8 None None None 73661415 Common - hypothetical protein SSP0106 32 None None None 73663473 Common - putative nucleoside-diphosphate-sugar epimerase SSP2164 181 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 73662774 Common - DNA mismatch repair protein SSP1465 205 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 73661807 Common - hypothetical protein SSP0498 22 COG1959 COG1959, Predicted transcriptional regulator Transcription 73662246 Common - truncated ABC-type amino acid transport system periplasmic component SSP0937 179 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 73663589 Common - putative transcriptional regulator SSP2280 99 COG2188 PhnF, Transcriptional regulators Transcription 73662333 Common - hypothetical protein SSP1024 5 COG4768 COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain General function prediction only 73662882 Common - uracil permease SSP1573 124 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 73663594 Common - putative transcription activator of glutamate synthase operon SSP2285 181 COG0583 LysR, Transcriptional regulator Transcription 73662823 Common hslU ATP-dependent protease ATP-binding subunit SSP1514 211 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 73663655 Common - hypothetical protein SSP2346 39 COG3053 CitC, Citrate lyase synthetase Energy production and conversion 73661327 Common - putative glycosyltransferase SSP0018 44 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 73662111 Common - putative ATP-dependent RNA helicase SSP0802 242 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 73662640 Common - putative sugar phosphate isomerase epimerase SSP1331 30 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 73662651 Common - hypothetical protein SSP1342 11 COG4548 NorD, Nitric oxide reductase activation protein Inorganic ion transport and metabolism 73663237 Common - hypothetical protein SSP1928 2 None None None 73661314 Common - DNA gyrase subunit B SSP0005 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 73662189 Common - hypothetical protein SSP0880 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 73661583 Common - putative amino acid transporter SSP0274 172 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 73662834 Common - hypothetical protein SSP1525 11 COG4485 COG4485, Predicted membrane protein Function unknown 73663605 Common - truncated lipase precursor SSP2296 4 None None None 73662791 Common - phosphatidylglycerophosphate synthase SSP1482 205 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 73663173 Common - ABC-type uncharacterized transport system periplasmic component SSP1864 101 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 73663633 Common - xanthine uracil permease SSP2324 126 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 73663066 Common - putative lipoate-protein ligase A SSP1757 81 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 73663648 Pathogen - hypothetical protein SSP2339 1 None None None 73661909 Common - putative transcriptional regulator SSP0600 63 COG1316 LytR, Transcriptional regulator Transcription 73661708 Common - high affinity proline permease SSP0399 173 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 73662482 Common - GTP-binding protein LepA SSP1173 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 73662665 Common - aspartate semialdehyde dehydrogenase SSP1356 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 73663443 Common - uracil-DNA glycosylase SSP2134 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 73661697 Common - putative ABC-type Mn Zn transport system periplasmic Mn Zn-binding protein SSP0388 153 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 73661506 Pathogen - hypothetical protein SSP0197 1 None None None 73661492 Common - putative transcriptional regulator SSP0183 105 COG1396 HipB, Predicted transcriptional regulators Transcription 73663619 Common - truncated transcriptional regulator SSP2310 193 COG0583 LysR, Transcriptional regulator Transcription 73663691 Common - hypothetical protein SSP2382 24 COG3610 COG3610, Uncharacterized conserved protein Function unknown 73662204 Common - hypothetical protein SSP0895 3 None None None 73662466 Common - hypothetical protein SSP1157 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 73662953 Common - hypothetical protein SSP1644 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 73661817 Common - putative proton sodium-glutamate symport protein SSP0508 164 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 73661826 Pathogen - hypothetical protein SSP0517 1 None None None 73661520 Common - putative proline betaine transporter SSP0211 147 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662752 Pathogen - hypothetical protein SSP1443 1 None None None 73663048 Pathogen - hypothetical protein SSP1739 1 None None None 73661696 Common - putative acetyltransferase SSP0387 49 COG2388 COG2388, Predicted acetyltransferase General function prediction only 73662887 Common ileS isoleucyl-tRNA synthetase SSP1578 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663728 Common - hypothetical protein SSP2419 24 None None None 73663698 Common - acetate-CoA ligase SSP2389 223 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 73663348 Common - hypothetical protein SSP2039 124 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 73662560 Common - putative short chain dehydrogenase SSP1251 37 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 73661667 Common - hypothetical protein SSP0358 11 None None None 73662118 Common - hypothetical protein SSP0809 57 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 73661336 Pathogen - hypothetical protein SSP0027 1 None None None 73662442 Common - putative transcriptional regulator SSP1133 170 COG1959 COG1959, Predicted transcriptional regulator Transcription 73663341 Common - putative transcriptional regulator SSP2032 110 COG1846 MarR, Transcriptional regulators Transcription 73663592 Common gltD glutamate synthase subunit beta SSP2283 198 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 73661398 Common - ABC-type transport system ATPase component SSP0089 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 73663235 Common - fosfomycin resistance protein FosB SSP1926 21 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73661500 Common - fructose-1,6-bisphosphate aldolase SSP0191 30 COG3588 COG3588, Fructose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 73663188 Pathogen - hypothetical protein SSP1879 1 None None None 73661771 Common - murein hydrolase regulator LrgA SSP0462 17 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 73662706 Common - oxacillin resistance-related FmtC protein SSP1397 71 COG2898 COG2898, Uncharacterized conserved protein Function unknown 73662383 Common - alkaline phosphatase synthesis sensor protein SSP1074 223 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 73663338 Pathogen - hypothetical protein SSP2029 1 None None None 73662893 Common - hypothetical protein SSP1584 174 COG1496 COG1496, Uncharacterized conserved protein Function unknown 73662049 Pathogen - hypothetical protein SSP0740 1 None None None 73663061 Common - hypothetical protein SSP1752 16 COG2314 XynA, Predicted membrane protein Function unknown 73662149 Common - accessory gene regulator C SSP0840 26 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 73661529 Common - putative ornithine aminotransferase precursor SSP0220 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 73662543 Common - arginine repressor SSP1234 80 COG1438 ArgR, Arginine repressor Transcription 73663240 Pathogen - hypothetical protein SSP1931 1 COG5577 COG5577, Spore coat protein Cell envelope biogenesis, outer membrane 73661701 Common - putative glyoxalase bleomycin resistance protein SSP0392 40 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 73661588 Common - hypothetical protein SSP0279 70 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 73662987 Common - hypothetical protein SSP1678 4 None None None 73662209 Common - putative glutamine amidotransferase SSP0900 64 COG3442 COG3442, Predicted glutamine amidotransferase General function prediction only 73663546 Common - pyridoxine biosynthesis protein SSP2237 99 COG0214 SNZ1, Pyridoxine biosynthesis enzyme Coenzyme metabolism 73662311 Common - repressor of toxins SSP1002 4 None None None 73663510 Common - putative acetyltransferase SSP2201 28 COG3981 COG3981, Predicted acetyltransferase General function prediction only 73662382 Common - alkaline phosphatase synthesis transcriptional regulatory protein SSP1073 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 73662359 Common - putative protease SSP1050 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 73663418 Common - putative iron compound ABC transporter permease component SSP2109 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 73661741 Common - D-serine dehydratase SSP0432 50 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 73662060 Common - S-ribosylhomocysteinase SSP0751 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 73662344 Common - putative proteinase SSP1035 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 73662256 Common - two-component response regulator SSP0947 218 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 73662805 Pathogen - hypothetical protein SSP1496 1 COG2378 COG2378, Predicted transcriptional regulator Transcription 73662509 Common - putative ABC transport system ATPase component SSP1200 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 73662982 Common - protoheme IX farnesyltransferase SSP1673 169 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 73662236 Common - ABC-type multidrug protein lipid transport system ATPase component SSP0927 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 73661373 Common - putative glycosyltransferase SSP0064 127 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73662031 Common - hypothetical protein SSP0722 68 COG1624 COG1624, Uncharacterized conserved protein Function unknown 73662038 Common - D-fructose-6-phosphate amidotransferase SSP0729 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 73661812 Common - putative small heat shock protein SSP0503 139 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 73663674 Pathogen - hypothetical protein SSP2365 1 None None None 73663010 Common - putative hydrolase SSP1701 156 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 73663259 Common - hypothetical protein SSP1950 54 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 73663025 Common - phosphoribosylamine-glycine ligase SSP1716 232 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 73662387 Common - glyceraldehyde 3-phosphate dehydrogenase 2 SSP1078 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 73663012 Common - putative K+ transport system NAD-binding component SSP1703 154 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 73663599 Pathogen - hypothetical protein SSP2290 1 None None None 73662040 Common - putative ABC transporter ATP-binding protein SSP0731 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 73662162 Common - hypothetical protein SSP0853 145 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 73662191 Common - adenylosuccinate lyase SSP0882 240 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 73662495 Common - hypothetical protein SSP1186 155 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 73662570 Common - staphylococcal respiratory response protein SrrB SSP1261 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 73663101 Common - ABC-type dipeptide oligopeptide nickel transport system ATPase component SSP1792 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 73662918 Pathogen - hypothetical protein SSP1609 2 None None None 73662850 Common - fatty acid biosynthesis transcriptional regulator SSP1541 16 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 73663389 Common - teichoic acid biosynthesis protein SSP2080 20 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 73661400 Common - putative monooxygenase SSP0091 65 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73661613 Common - putative di- and tricarboxylate transporter SSP0304 113 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 73662083 Pathogen - putative ATP synthase protein I SSP0774 1 None None None 73662143 Common - putative transporter component SSP0834 76 COG2391 COG2391, Predicted transporter component General function prediction only 73663420 Common - putative endonuclease III SSP2111 67 COG2231 COG2231, Uncharacterized protein related to Endonuclease III DNA replication, recombination, and repair 73661872 Common - ribulokinase SSP0563 108 COG1069 AraB, Ribulose kinase Energy production and conversion 73662676 Pathogen - hypothetical protein SSP1367 1 None None None 73662428 Common - S-adenosylmethionine tRNA ribosyltransferase SSP1119 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 73663032 Common - phosphoribosylformylglycinamidine synthase PurS component SSP1723 90 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 73663122 Common pgi glucose-6-phosphate isomerase SSP1813 206 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 73662135 Common - hypothetical protein SSP0826 209 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 73661868 Common - hypothetical protein SSP0559 7 None None None 73663429 Common - phosphomevalonate kinase SSP2120 11 COG1577 ERG12, Mevalonate kinase Lipid metabolism 73661631 Common - putative 6-O-methylguanine DNA methyltransferase SSP0322 219 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 73663384 Common - putative nucleoside transporter SSP2075 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 73663134 Common - putative monovalent cation/H+ antiporter subunit C SSP1825 93 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 73662621 Common thyA thymidylate synthase SSP1312 145 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 73663075 Pathogen - hypothetical protein SSP1766 1 None None None 73662370 Common - putative universal stress protein SSP1061 39 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 73662601 Common - putative endonuclease SSP1292 240 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 73661350 Common - hypothetical protein SSP0041 4 None None None 73662936 Common - putative dehydrogenase SSP1627 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 73662704 Common - High affinity ribose transport protein rbsD SSP1395 44 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 73662683 Common - tryptophan synthase subunit beta SSP1374 227 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 73661735 Common hisH imidazole glycerol phosphate synthase subunit HisH SSP0426 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 73662363 Common - acetate kinase SSP1054 162 COG0282 ackA, Acetate kinase Energy production and conversion 73662069 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase SSP0760 215 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 73662211 Pathogen - putative truncated transposase SSP0902 1 None None None 73662350 Common - OsmC-like protein SSP1041 32 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 73662744 Common - hypothetical protein SSP1435 133 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73661335 Common - hypothetical protein orfX SSP0026 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 73663742 Common - aldo keto reductase family protein SSP2433 145 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 73663252 Common - hypothetical protein SSP1943 3 COG4707 COG4707, Uncharacterized protein conserved in bacteria Function unknown 73662565 Common - hypothetical protein SSP1256 5 COG1547 COG1547, Uncharacterized conserved protein Function unknown 73663352 Pathogen - hypothetical protein SSP2043 1 None None None 73662475 Common - hypothetical protein SSP1166 193 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 73662990 Pathogen - hypothetical protein SSP1681 1 None None None 73663433 Common eutD phosphotransacetylase SSP2124 166 COG0280 Pta, Phosphotransacetylase Energy production and conversion 73663331 Pathogen - hypothetical protein SSP2022 1 None None None 73661482 Pathogen - hypothetical protein SSP0173 1 None None None 73663149 Common - poly D-alanine transfer protein SSP1840 13 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 73662511 Common - zinc-specific metalloregulatory protein SSP1202 146 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 73662831 Common - ribonuclease HII SSP1522 229 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 73663683 Common - putative 14-beta-N-acetylmuramidase SSP2374 14 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 73662198 Common - high affinity proline permease SSP0889 171 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 73662108 Common - cell division membrane protein SSP0799 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 73663284 Common - hypothetical protein SSP1975 9 None None None 73661514 Common - putative acetyltransferase SSP0205 5 COG0456 RimI, Acetyltransferases General function prediction only 73661356 Pathogen - hypothetical protein SSP0047 1 None None None 73663052 Common - hypothetical protein SSP1743 17 COG3594 NolL, Fucose 4-O-acetylase and related acetyltransferases Carbohydrate transport and metabolism 73663515 Common - putative peptidase SSP2206 167 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 73663398 Common - putative NhaP-type Na+ H+ and K+ H+ antiporter SSP2089 101 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 73662075 Common prfA peptide chain release factor 1 SSP0766 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 73662421 Common rplU 50S ribosomal protein L21 SSP1112 213 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 73662657 Common - hypothetical protein SSP1348 4 COG4699 COG4699, Uncharacterized protein conserved in bacteria Function unknown 73661907 Common - hypothetical protein SSP0598 28 COG2378 COG2378, Predicted transcriptional regulator Transcription 73661970 Common - hypothetical protein SSP0661 2 None None None 73662221 Common - low molecular weight phosphotyrosine protein phosphatase SSP0912 132 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 73661369 Common - capsular polysaccharide biosynthesis protein SSP0060 26 COG3944 COG3944, Capsular polysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 73661653 Common - putative truncated permease of the drug metabolite transporter SSP0344 22 None None None 73663111 Common - hypothetical protein SSP1802 145 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 73662539 Common nusB transcription antitermination protein NusB SSP1230 186 COG0781 NusB, Transcription termination factor Transcription 73662166 Common - truncated ABC-type multidrug transport system ATPase component SSP0857 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 73662338 Common - acetoin utilization protein SSP1029 8 None None None 73661681 Common - N-acetylmannosamine-6-phosphate 2-epimerase SSP0372 43 COG3010 NanE, Putative N-acetylmannosamine-6-phosphate epimerase Carbohydrate transport and metabolism 73663150 Common - D-alanine--poly(phosphoribitol) ligase subunit 2 SSP1841 11 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 73661607 Common - sulfate permease SSP0298 160 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 73662814 Common - prolyl-tRNA synthetase SSP1505 244 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663096 Common - adaptor protein SSP1787 7 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 73662911 Common - putative transporter SSP1602 126 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 73663196 Pathogen - hypothetical protein SSP1887 1 None None None 73662643 Common - putative lipopolysaccharide biosynthesis protein SSP1334 176 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 73662898 Common - phospho-N-muramic acid-pentapeptide translocase SSP1589 220 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 73661576 Common - putative ABC-type dipeptide oligopeptide nickel transport system periplasmic component SSP0267 164 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 73663086 Common - putative RNA pseudouridylate synthase SSP1777 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 73663487 Common - ribulokinase SSP2178 103 COG1069 AraB, Ribulose kinase Energy production and conversion 73662694 Pathogen - hypothetical protein SSP1385 1 None None None 73662825 Common - putative integrase recombinase SSP1516 231 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 73661378 Pathogen - putative polysaccharide polymerase SSP0069 1 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 73663636 Pathogen - hypothetical protein SSP2327 1 None None None 73662452 Common - alanyl-tRNA synthetase SSP1143 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73662737 Common - hypothetical protein SSP1428 6 None None None 73661477 Pathogen - putative RNA binding protein SSP0168 2 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73662867 Common - putative acetyltransferase SSP1558 88 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73663404 Common - putative monovalent cation/H+ antiporter subunit B SSP2095 7 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 73661785 Common - hypothetical protein SSP0476 11 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 73662948 Pathogen - hypothetical protein SSP1639 1 None None None 73662618 Common - hypothetical protein SSP1309 5 None None None 73662575 Pathogen - putative elastin binding protein SSP1266 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73663103 Common - ABC-type dipeptide oligopeptide nickel transport system permease component SSP1794 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 73662966 Common pheS phenylalanyl-tRNA synthetase subunit alpha SSP1657 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 73661310 Common dnaA chromosomal replication initiation protein SSP0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 73662562 Common - putative ADP-ribose pyrophosphatase SSP1253 186 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 73662782 Pathogen - hypothetical protein SSP1473 1 None None None 73662598 Common - putative ATP-dependent DNA helicase SSP1289 201 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 73662259 Common - teichoic acid translocation permease protein SSP0950 62 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 73662603 Common - penicillin-binding protein 2 SSP1294 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 73663501 Common - putative periplasmic secreted protein SSP2192 14 COG3477 COG3477, Predicted periplasmic/secreted protein Function unknown 73662506 Common - hypothetical protein SSP1197 104 COG0327 COG0327, Uncharacterized conserved protein Function unknown 73661428 Common - putative dihydrofolate reductase SSP0119 71 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 73663119 Common - type-I signal peptidase B SSP1810 177 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 73662569 Common - staphylococcal respiratory response protein SrrA SSP1260 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 73661898 Pathogen - hypothetical protein SSP0589 1 None None None 73661545 Common - similar to quorum-quenching N-acyl homoserine lactonase SSP0236 45 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 73663520 Common - putative ribosomal protein HS6-type SSP2211 12 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 73662254 Common - putative pseudouridylate synthase SSP0945 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 73663005 Common - pyruvate dehydrogenase E1 component alpha subunit SSP1696 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 73662630 Common murG N-acetylglucosaminyl transferase SSP1321 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 73662367 Common - putative copper homeostasis protein SSP1058 55 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 73662628 Common - carboxy-terminal processing protease SSP1319 184 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 73662441 Common - recombination factor protein RarA SSP1132 242 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 73662840 Common - putative monooxygenase SSP1531 69 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 73661765 Common - putative acyl-CoA dehydrogenase SSP0456 49 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 73661637 Common - putative secretory antigen precursor SSP0328 9 COG3942 COG3942, Surface antigen General function prediction only 73661757 Common - hypothetical protein SSP0448 62 COG3246 COG3246, Uncharacterized conserved protein Function unknown 73663738 Pathogen - hypothetical protein SSP2429 1 None None None 73663694 Common - putative truncated transcriptional regulator SSP2385 13 COG1476 COG1476, Predicted transcriptional regulators Transcription 73662300 Common - putative truncated transposase SSP0991 7 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 73662528 Common - glycine dehydrogenase subunit 1 SSP1219 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 73661595 Common - D-serine D-alanine glycine transporter SSP0286 174 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 73663412 Pathogen - staphylococcal accessory regulator A SSP2103 1 None None None 73662941 Common - truncated arsenic efflux pump protein SSP1632 47 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 73663465 Common - putative cytosine adenosine deaminase SSP2156 207 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 73661941 Common - ABC-type molybdate transport system periplasmic component SSP0632 156 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 73662186 Common - putative nitric oxide synthase SSP0877 11 COG4362 COG4362, Nitric oxide synthase, oxygenase domain Inorganic ion transport and metabolism / Amino acid transport and metabolism 73663274 Common - hypothetical protein SSP1965 52 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 73661586 Common - hypothetical protein SSP0277 4 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 73662975 Common - hypothetical protein SSP1666 8 COG4471 COG4471, Uncharacterized protein conserved in bacteria Function unknown 73662103 Common - putative HD superfamily hydrolase SSP0794 59 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 73663219 Pathogen - hypothetical protein SSP1910 1 None None None 73662269 Pathogen - hypothetical protein SSP0960 1 COG4980 GvpP, Gas vesicle protein General function prediction only 73663629 Common - hypothetical protein SSP2320 2 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 73661384 Pathogen - hypothetical protein SSP0075 1 None None None 73662287 Common - aldo keto reductase family protein SSP0978 147 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 73661628 Common - putative truncated permease of the major facilitator superfamily SSP0319 24 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663366 Common - hypothetical protein SSP2057 8 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 73662418 Pathogen - hypothetical protein SSP1109 1 None None None 73663755 Common rpmH 50S ribosomal protein L34 SSP2446 7 None None None 73661470 Common - hypothetical protein SSP0161 2 None None None 73662409 Common - DNA-3-methyladenine glycosidase SSP1100 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 73661685 Common - sodium:solute symporter family protein SSP0376 112 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 73661875 Common - putative aldose 1-epimerase SSP0566 87 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 73661889 Common - putative truncated transposase SSP0580 7 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 73663359 Common - transcriptional regulator SSP2050 187 COG0583 LysR, Transcriptional regulator Transcription 73663622 Common - hypothetical protein SSP2313 55 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 73662764 Common - glutathione peroxidase SSP1455 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 73662772 Common - glycerol-3-phosphate responsive antiterminator SSP1463 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 73662878 Common carB carbamoyl phosphate synthase large subunit SSP1569 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 73662989 Common - putative GTPase SSP1680 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 73662558 Common - hypothetical protein SSP1249 108 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 73662903 Common - hypothetical protein SSP1594 20 COG4365 COG4365, Uncharacterized protein conserved in bacteria Function unknown 73663453 Pathogen - hypothetical protein SSP2144 1 None None None 73661407 Common - putative truncated beta-D-mannosidase SSP0098 36 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 73661542 Common - truncated phosphotransferase system glucose maltose N-acetylglucosamine-specific IIC component SSP0233 14 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 73663631 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein SSP2322 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 73663657 Common - putative pyridine nucleotide-disulphide oxidoreductase protein SSP2348 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 73661880 Common - putative transcriptional regulator SSP0571 186 COG0583 LysR, Transcriptional regulator Transcription 73661650 Common - putative acetyltransferase SSP0341 44 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73661848 Common - malate:quinone oxidoreductase SSP0539 56 COG0579 COG0579, Predicted dehydrogenase General function prediction only 73662653 Common - putative osmoprotectant transporter SSP1344 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 73661410 Common - putative metal-dependent hydrolase SSP0101 79 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 73661417 Common - hypothetical protein SSP0108 3 None None None 73663230 Common - putative nucleoside-diphosphate sugar epimerase SSP1921 105 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 73661993 Common - adenylate kinase SSP0684 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 73662828 Common - DprA SMF protein putative DNA processing factor SSP1519 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 73663094 Common - putative oligopeptidase SSP1785 85 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 73663220 Pathogen - hypothetical protein SSP1911 1 None None None 73661657 Common - poly-gamma-glutamate synthesis protein PgsB SSP0348 11 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 73661599 Common - hypothetical protein SSP0290 76 COG3189 COG3189, Uncharacterized conserved protein Function unknown 73662444 Pathogen - hypothetical protein SSP1135 1 None None None 73663068 Pathogen - hypothetical protein SSP1759 1 None None None 73661809 Common - putative acetyltransferase SSP0500 7 COG3153 COG3153, Predicted acetyltransferase General function prediction only 73662573 Common - hypothetical protein SSP1264 4 COG4955 COG4955, Uncharacterized protein conserved in bacteria Function unknown 73662510 Common - putative ABC transport system permease component SSP1201 188 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 73663543 Common - transcriptional regulator of class III stress genes SSP2234 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 73661460 Common - putative permease SSP0151 54 COG0730 COG0730, Predicted permeases General function prediction only 73662547 Common - branched-chain alpha-keto acid dehydrogenase E1 alpha subunit SSP1238 155 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 73661836 Common - putative ribose 5-phosphate isomerase SSP0527 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 73662028 Pathogen - hypothetical protein SSP0719 1 None None None 73663262 Common - thioredoxin reductase SSP1953 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 73661926 Common - putative regulatory protein SSP0617 13 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 73662836 Common - tRNA guanine-N1-mehtyltransferase SSP1527 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 73662964 Common - ribonuclease HIII SSP1655 22 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 73662264 Common - putative metallophosphoesterase SSP0955 79 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 73661479 Common - glycerophosphoryl diester phosphodiesterase SSP0170 157 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 73662397 Common - hypothetical protein SSP1088 3 None None None 73662176 Pathogen - hypothetical protein SSP0867 1 None None None 73663209 Pathogen - hypothetical protein SSP1900 1 None None None 73663202 Pathogen - hypothetical protein SSP1893 1 None None None 73663306 Common - putative ABC-type proline glycine betaine transport system ATPase component SSP1997 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 73663179 Common - hypothetical protein SSP1870 31 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 73663437 Common - hypothetical protein SSP2128 21 COG3610 COG3610, Uncharacterized conserved protein Function unknown 73663168 Common - putative selenocysteine lyase SSP1859 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 73662857 Common rpmB 50S ribosomal protein L28 SSP1548 77 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 73662217 Common - signal transduction histidine kinase SSP0908 147 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 73663643 Common - putative alkyl hydroperoxide reductase subunit F SSP2334 249 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 73662273 Common - signal transduction protein SSP0964 4 None None None 73661953 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A SSP0644 39 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 73663552 Common - cysteine synthase SSP2243 224 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 73663344 Common - undecaprenyl pyrophosphate phosphatase SSP2035 199 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 73661712 Common - hypothetical protein SSP0403 8 COG1289 COG1289, Predicted membrane protein Function unknown 73663264 Common - putative acetyltransferase SSP1955 184 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 73663595 Common - hypothetical protein SSP2286 31 COG5438 COG5438, Predicted multitransmembrane protein Function unknown 73661552 Common - ABC-type amino acid transport system permease component SSP0243 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 73662862 Common - putative protein phosphatase SSP1553 128 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 73662296 Pathogen - hypothetical protein SSP0987 1 None None None 73662281 Common - hypothetical protein SSP0972 183 COG0759 COG0759, Uncharacterized conserved protein Function unknown 73663483 Common - NAD-specific glutamate dehydrogenase SSP2174 180 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 73661799 Common - putative ABC-type Mn Zn transport system periplasmic Mn Zn-binding protein SSP0490 165 COG3443 COG3443, Predicted periplasmic or secreted protein General function prediction only 73663584 Common - Orn Lys Arg decarboxylase family protein SSP2275 37 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 73662010 Common - putative glycine betaine transporter SSP0701 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 73663566 Common - UDP-N-acetylglucosamine pyrophosphorylase SSP2257 237 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 73662125 Common - hypothetical protein SSP0816 12 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 73661431 Common - putative truncated transcriptional regulator SSP0122 5 COG1737 RpiR, Transcriptional regulators Transcription 73663573 Common - hypothetical protein SSP2264 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 73662355 Common - septation ring formation regulator EzrA SSP1046 61 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 73662087 Common - F0F1-type ATP synthase delta subunit SSP0778 120 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 73663703 Pathogen - hypothetical protein SSP2394 1 COG5609 COG5609, Uncharacterized conserved protein Function unknown 73661409 Common - putative truncated amidohydrolase SSP0100 70 COG0388 COG0388, Predicted amidohydrolase General function prediction only 73661933 Pathogen - hypothetical protein SSP0624 1 None None None 73662021 Common - hypothetical protein SSP0712 20 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 73661664 Common - putative zinc-binding dehydrogenase SSP0355 26 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 73662499 Common - putative recombination protein O SSP1190 28 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 73663559 Common - hypothetical protein SSP2250 40 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 73661802 Common - putative transcriptional regulator SSP0493 50 COG1695 COG1695, Predicted transcriptional regulators Transcription 73663422 Common - hypothetical protein SSP2113 7 COG4506 COG4506, Uncharacterized protein conserved in bacteria Function unknown 73662055 Common deoD purine nucleoside phosphorylase SSP0746 94 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 73661472 Common - hypothetical protein SSP0163 22 None None None 73662003 Common truA tRNA pseudouridine synthase A SSP0694 234 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 73663396 Common - putative ABC-type Mn2+ Zn2+ transport system permease component SSP2087 190 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 73661360 Pathogen - hypothetical protein SSP0051 1 None None None 73663185 Pathogen - hypothetical protein SSP1876 1 None None None 73662880 Common pyrC dihydroorotase SSP1571 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 73661955 Pathogen - hypothetical protein SSP0646 1 None None None 73663023 Common - putative ABC-type cobalt transport system ATPase component SSP1714 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 73662042 Pathogen - hypothetical protein SSP0733 1 None None None 73663720 Common - hypothetical protein SSP2411 7 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 73662171 Common - hypothetical protein SSP0862 10 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 73662182 Common - putative amidase related to nicotinamidase SSP0873 75 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 73663070 Common - putative nucleotidase SSP1761 84 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 73663709 Pathogen - hypothetical protein SSP2400 1 None None None 73661561 Common - cysteine synthase SSP0252 225 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 73663250 Pathogen - hypothetical protein SSP1941 1 None None None 73662529 Common - glycine dehydrogenase subunit 2 SSP1220 173 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 73663617 Common - putative permease of the major facilitator superfamily SSP2308 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73663333 Common - hypothetical protein SSP2024 34 COG1661 COG1661, Predicted DNA-binding protein with PD1-like DNA-binding motif General function prediction only 73663313 Pathogen - hypothetical protein SSP2004 1 None None None 73663041 Common - quinol oxidase polypeptide III SSP1732 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 73662522 Common - putative DNA transport machinery protein SSP1213 90 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 73663021 Pathogen - hypothetical protein SSP1712 1 None None None 73663688 Common - hypothetical protein SSP2379 40 COG3002 COG3002, Uncharacterized protein conserved in bacteria Function unknown 73663242 Common - hypothetical protein SSP1933 13 COG3747 COG3747, Phage terminase, small subunit DNA replication, recombination, and repair 73661931 Common - putative acyl-CoA dehydrogenase SSP0622 148 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 73662328 Common - putative thioredoxin SSP1019 65 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 73661900 Common - putative amino acid permease SSP0591 170 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 73663017 Common - phosphocarrier protein HPr SSP1708 147 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 73661641 Common - holin-like protein SSP0332 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 73661387 Common - hypothetical protein SSP0078 135 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 73662187 Common - nicotinate phosphoribosyltransferase SSP0878 115 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 73662315 Common leuS leucyl-tRNA synthetase SSP1006 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73663019 Common - putative methyltransferase SSP1710 136 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 73661714 Common - hypothetical protein SSP0405 7 None None None 73662012 Pathogen - hypothetical protein SSP0703 1 COG5547 COG5547, Small integral membrane protein Function unknown 73663676 Pathogen - hypothetical protein SSP2367 1 None None None 73661991 Common rplO 50S ribosomal protein L15 SSP0682 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 73662497 Common - cytidine deaminase SSP1188 118 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 73662036 Common - putative transcriptional antiterminator SSP0727 32 COG3711 BglG, Transcriptional antiterminator Transcription 73661405 Common - putative truncated monooxygenase SSP0096 12 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 73661938 Common - galactokinase SSP0629 89 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 73661480 Common - putative transcriptional regulator SSP0171 39 COG1846 MarR, Transcriptional regulators Transcription 73662130 Common - 2-isopropylmalate synthase SSP0821 214 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 73662626 Common - PTS system glucose-specific IIA component SSP1317 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 73663493 Common - transcriptional regulator SSP2184 121 COG1609 PurR, Transcriptional regulators Transcription 73662488 Common - putative ribosomal protein L11 methylase SSP1179 181 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 73662437 Common hisS histidyl-tRNA synthetase SSP1128 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 73661985 Common rpsN 30S ribosomal protein S14 SSP0676 196 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 73661487 Common - glycerate kinase SSP0178 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 73661499 Common - hypothetical protein SSP0190 16 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 73663726 Common - hypothetical protein SSP2417 59 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 73663077 Common - putative UDP-N-acetylglucosamine transferase SSP1768 32 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 73661998 Common - DNA-directed RNA polymerase subunit alpha SSP0689 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 73662120 Common - anti-anti-sigma regulatory factor SSP0811 41 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 73662581 Common - glycerol-3-phosphate dehydrogenase SSP1272 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 73662885 Common - lipoprotein signal peptidase SSP1576 183 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 73662137 Common - putative acetyltransferase SSP0828 175 COG0456 RimI, Acetyltransferases General function prediction only 73662663 Common - dihydrodipicolinate reductase SSP1354 214 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 73661522 Common - hypothetical protein SSP0213 2 None None None 73662754 Pathogen - hypothetical protein SSP1445 1 None None None 73662342 Common - putative monofunctional glycosyltransferase SSP1033 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 73663249 Common - putative primase SSP1940 44 COG3378 COG3378, Predicted ATPase General function prediction only 73661819 Common - putative transcriptional regulator SSP0510 63 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73663517 Common - elongation factor G SSP2208 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 73662580 Common engA GTP-binding protein EngA SSP1271 223 COG1160 COG1160, Predicted GTPases General function prediction only 73662335 Common - bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase SSP1026 189 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 73662725 Common - transketolase SSP1416 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 73661581 Common - putative ferrichrome-binding lipoprotein precursor SSP0272 47 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 73661490 Common - hypothetical protein SSP0181 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 73662623 Common - hypothetical protein SSP1314 51 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 73662610 Common - putative NADH-flavin reductase SSP1301 36 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 73661813 Common - putative small heat shock protein SSP0504 78 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 73663343 Common - putative ABC-type transport system ATPase component SSP2034 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 73662321 Common - dipeptidase PepV SSP1012 95 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 73662481 Common rpsT 30S ribosomal protein S20 SSP1172 109 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 73661458 Pathogen - hypothetical protein SSP0149 2 COG2311 COG2311, Predicted membrane protein Function unknown 73661572 Common ureC urease subunit alpha SSP0263 97 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 73661396 Common - putative truncated permease of the major facilitator superfamily SSP0087 24 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73661694 Common - ABC-type multidrug protein lipid transport system ATPase component SSP0385 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 73663146 Common - putative NADH dehydrogenase FAD-containing subunit SSP1837 204 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 73662934 Common - hypothetical protein SSP1625 153 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 73663638 Common - putative sodium:dicarboxylate symporter protein SSP2329 145 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 73662789 Common recA recombinase A SSP1480 224 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 73662571 Common - hypothetical protein SSP1262 25 COG3601 COG3601, Predicted membrane protein Function unknown 73661504 Common - glycine betaine aldehyde dehydrogenase SSP0195 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 73662094 Common - hydroxymyristoyl-acyl carrier protein dehydratase SSP0785 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 73662891 Common - hypothetical protein SSP1582 51 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 73661725 Pathogen - hypothetical protein SSP0416 1 None None None 73661609 Common - ABC-type transport system involved in lipoprotein release permease component SSP0300 19 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 73663054 Common - putative transcriptional regulator SSP1745 108 COG1846 MarR, Transcriptional regulators Transcription 73661804 Common - hypothetical protein SSP0495 30 COG3832 COG3832, Uncharacterized conserved protein Function unknown 73662158 Pathogen - hypothetical protein SSP0849 1 None None None 73663325 Common - N-acetylglucosamine-6-phosphate deacetylase SSP2016 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 73662513 Common - penicillin-binding protein 3 SSP1204 191 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 73662153 Common - nitroreductase family protein SSP0844 28 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 73663117 Common - putative ATP-dependent nuclease subunit A SSP1808 228 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 73661861 Common - putative lipase SSP0552 54 COG0657 Aes, Esterase/lipase Lipid metabolism 73661536 Common - putative transcriptional regulator SSP0227 17 COG1309 AcrR, Transcriptional regulator Transcription 73661729 Common - putative acetyltransferase SSP0420 32 COG0456 RimI, Acetyltransferases General function prediction only 73661469 Common - truncated biofilm-associated surface protein SSP0160 42 None None None 73662464 Common - putative biotin carboxyl carrier protein of acetyl-CoA carboxylase SSP1155 180 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 73661530 Common argC N-acetyl-gamma-glutamyl-phosphate reductase SSP0221 215 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 73662608 Common - putative N6-adenine-specific DNA methylase SSP1299 134 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 73661518 Common - putative enzyme of poly-gamma-glutamate biosynthesis SSP0209 65 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 73661525 Common - putative truncated gluconate transporter SSP0216 62 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 73663681 Common - single-strand DNA-binding protein SSP2372 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 73661382 Common - putative restriction endonuclease SSP0073 17 None None None 73663147 Common - hypothetical protein SSP1838 5 COG4837 COG4837, Uncharacterized protein conserved in bacteria Function unknown 73661670 Common - putative transcriptional regulator SSP0361 29 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 73662847 Common - 3-oxoacyl-[acyl-carrier protein] reductase SSP1538 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73661363 Common - putative type I site-specific restriction-modification system restriction subunit SSP0054 151 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 73661605 Common - putative copper chaperone SSP0296 91 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 73661824 Pathogen - hypothetical protein SSP0515 1 COG1511 COG1511, Predicted membrane protein Function unknown 73661621 Common - putative transcriptional regulator SSP0312 18 COG1309 AcrR, Transcriptional regulator Transcription 73662955 Common sdhB succinate dehydrogenase iron-sulfur subunit SSP1646 207 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 73663120 Common - type-I signal peptidase A SSP1811 62 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 73662164 Pathogen - hypothetical protein SSP0855 1 None None None 73662778 Pathogen - hypothetical protein SSP1469 1 None None None 73661615 Common - putative acetyltransferase SSP0306 201 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 73663127 Common rocD ornithine--oxo-acid transaminase SSP1818 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 73663165 Pathogen - hypothetical protein SSP1856 1 None None None 73662781 Common - hypothetical protein SSP1472 3 COG4195 COG4195, Phage-related replication protein General function prediction only 73661965 Common - glucose-1-dehydrogenase SSP0656 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 73662655 Common - hypothetical protein SSP1346 4 COG4915 XpaC, 5-bromo-4-chloroindolyl phosphate hydrolysis protein General function prediction only 73663732 Common - putative acetyl-CoA acetyltransferase SSP2423 187 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 73663227 Pathogen - hypothetical protein SSP1918 1 None None None 73662747 Common - homoserine dehydrogenase SSP1438 216 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 73661324 Common rplI 50S ribosomal protein L9 SSP0015 212 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 73663036 Common - Methenyl tetrahydrofolate cyclohydrolase SSP1727 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 73661341 Pathogen - hypothetical protein SSP0032 1 None None None 73663158 Common - hypothetical protein SSP1849 11 COG4470 COG4470, Uncharacterized protein conserved in bacteria Function unknown 73662674 Common - putative phosphate uptake regulator SSP1365 196 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 73662939 Common - truncated arsenic efflux pump protein SSP1630 35 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 73663131 Common - hypothetical protein SSP1822 3 None None None 73663388 Common - teichoic acid biosynthesis protein SSP2079 179 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 73662688 Common - anthranilate synthase component I SSP1379 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 73663081 Common - putative Na+ alanine symporter SSP1772 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 73661866 Common - putative sodium glutamate symporter SSP0557 51 COG0786 GltS, Na+/glutamate symporter Amino acid transport and metabolism 73663445 Pathogen - hypothetical protein SSP2136 1 None None None 73662238 Common - glutamate-1-semialdehyde aminotransferase SSP0929 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 73662352 Common - spermidine acetyltransferase SSP1043 87 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 73663034 Common - phosphoribosylaminoimidazole carboxylase ATPase subunit SSP1725 203 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 73663172 Common - hypothetical protein SSP1863 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 73663378 Common - putative dihydroxyacetone kinase SSP2069 71 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 73661375 Pathogen - capsular polysaccharide synthesis protein SSP0066 1 None None None 73662411 Common - folylpolyglutamate synthase SSP1102 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 73661355 Common - cassette chromosome recombinase C SSP0046 128 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 73661977 Common rplV 50S ribosomal protein L22 SSP0668 225 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 73662852 Common - ATP-dependent DNA helicase SSP1543 213 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 73662426 Common - Holliday junction DNA helicase SSP1117 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 73661787 Common - hypothetical protein SSP0478 11 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 73661790 Common - putative cation efflux family protein SSP0481 176 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 73662983 Common - putative cytochrome aa3 controlling protein SSP1674 35 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 73661857 Common - putative transcriptional regulator SSP0548 12 COG1309 AcrR, Transcriptional regulator Transcription 73663525 Common rplJ 50S ribosomal protein L10 SSP2216 212 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 73662307 Common - riboflavin synthase beta-chain SSP0998 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 73663382 Common - ABC-type cobalamin Fe3+-siderophores transport system ATPase component SSP2073 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 73663138 Common - putative monovalent cation/H+ antiporter subunit G SSP1829 4 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 73662473 Common - putative nicotinic acid mononucleotide adenylyltransferase SSP1164 173 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 73663700 Common - putative permease of the major facilitator superfamily SSP2391 208 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 73662923 Pathogen - hypothetical protein SSP1614 1 None None None 73663435 Pathogen - hypothetical protein SSP2126 1 None None None 73663748 Common - putative transcriptional regulator SSP2439 8 COG1476 COG1476, Predicted transcriptional regulators Transcription