Symbiobacterium thermophilum IAM 14863, complete genome NC_006177 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 51894194 Common rplR 50S ribosomal protein L18 STH3059 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 51893612 Common - hypothetical protein STH2474 32 None None None 51893925 Common - endonuclease III STH2787 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 51891153 Common recR recombination protein STH15 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 51894430 Common - formate dehydrogenase-like protein STH3296 185 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51891665 Common - hypothetical protein STH527 15 None None None 51892579 Common - hypothetical protein STH1441 64 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 51892921 Common - ribosomal large subunit pseudouridine synthase B STH1783 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 51891593 Common - putative DNA-binding protein STH455 119 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 51893809 Nonpathogen - hypothetical protein STH2671 1 None None None 51891599 Common - putative chromate reductase STH461 42 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 51891592 Common - hypothetical protein STH454 39 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 51894417 Common - aldehyde ferredoxin oxidoreductase STH3283 59 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 51892990 Common - putative alkaline-shock protein STH1852 43 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 51894402 Nonpathogen - hypothetical protein STH3268 1 None None None 51893673 Common - fumarate hydratase subunit B STH2535 148 COG1838 FumA, Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain Energy production and conversion 51891563 Common - hypothetical protein STH425 10 None None None 51893051 Common - putative amidohydrolase STH1913 48 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 51893133 Common - hypothetical protein STH1995 96 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 51894081 Common - hypothetical protein STH2945 24 None None None 51892506 Common - UDP-N-acetyl-D-mannosamine dehydrogenase STH1368 147 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 51894450 Common - Lon-like ATP-dependent protease STH3316 237 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 51893280 Nonpathogen - hypothetical protein STH2142 1 None None None 51893316 Nonpathogen - hypothetical protein STH2178 1 None None None 51891654 Common - putative ferredoxin STH516 60 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 51892941 Common - hypothetical protein STH1803 134 COG1354 COG1354, Uncharacterized conserved protein Function unknown 51893441 Common - putative gluconate dehydrogenase STH2303 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51893002 Common - translation elongation factor P STH1864 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 51893028 Common - putative oxidoreductase STH1890 122 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 51891286 Common - oligopeptide ABC transporter permease protein STH148 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51892635 Common - phosphatidate cytidylyltransferase STH1497 208 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 51893804 Common - putative endonuclease III STH2666 227 COG2231 COG2231, Uncharacterized protein related to Endonuclease III DNA replication, recombination, and repair 51891975 Common - 6-phosphofructokinase STH837 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 51893959 Common - glutamyl-tRNA(Gln) amidotransferase subunit A STH2821 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 51891648 Common - hypothetical protein STH510 41 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 51892006 Common - efflux transporter protein STH868 112 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 51893179 Nonpathogen - hypothetical protein STH2041 3 None None None 51892697 Nonpathogen - hypothetical protein STH1559 1 None None None 51893112 Common - ABC transporter ATP-binding protein variant STH1974 166 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 51893434 Nonpathogen - hypothetical protein STH2296 7 None None None 51894209 Common rplD 50S ribosomal protein L4 STH3074 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 51891343 Common - putative superoxide dismutase STH205 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 51893115 Common - hypothetical protein STH1977 119 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 51894299 Common - aconitate hydratase STH3164 223 COG1048 AcnA, Aconitase A Energy production and conversion 51892257 Common - glycosyltransferase, group I STH1119 35 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51891499 Common - Lon protease STH361 227 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 51894184 Common - 30S ribosomal protein S11 STH3049 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 51892056 Nonpathogen napD nitrate reductase component STH918 1 COG3062 NapD, Uncharacterized protein involved in formation of periplasmic nitrate reductase Inorganic ion transport and metabolism 51893798 Common - arginase-family protein STH2660 139 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 51892963 Common - hypothetical protein STH1825 135 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51894356 Common - two-component sensor histidine kinase STH3221 155 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51892001 Common - hypothetical protein STH863 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 51891843 Common - branched-chain amino acid ABC transporter permease protein STH705 145 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51894223 Nonpathogen - hypothetical protein STH3088 1 None None None 51893609 Nonpathogen - putative acetyltransferase STH2471 6 COG0456 RimI, Acetyltransferases General function prediction only 51894107 Nonpathogen - hypothetical protein STH2971 8 COG2119 COG2119, Predicted membrane protein Function unknown 51892522 Common - ATP-dependent DNA helicase STH1384 223 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 51894247 Nonpathogen - conserved domain protein , histidine- and aspartate-rich STH3112 1 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 51891734 Common - hypothetical protein STH596 16 None None None 51891507 Nonpathogen - hypothetical protein STH369 4 None None None 51893332 Common - ABC transporter ATP-binding protein STH2194 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51891481 Common - ribonuclease PH (tRNA nucleotidyltransferase) STH343 179 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 51892315 Common - transcriptional regulator STH1177 80 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51891544 Nonpathogen - hypothetical protein STH406 1 None None None 51892582 Common - putative acetyltransferase STH1444 13 COG0456 RimI, Acetyltransferases General function prediction only 51893323 Common - heat-shock protein Hsp33 STH2185 79 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 51894099 Common - transcriptional regulator STH2963 131 COG1396 HipB, Predicted transcriptional regulators Transcription 51891696 Common - putative transport system permease protein STH558 11 None None None 51892450 Common - sugar ABC transporter permease protein STH1312 147 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 51892175 Common - oligopeptide ABC transporter permease protein STH1037 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891254 Nonpathogen - hypothetical protein STH116 1 COG0316 IscA, Uncharacterized conserved protein Function unknown 51893960 Common - glutamyl-tRNA(Gln) amidotransferase subunit C STH2822 112 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 51891988 Nonpathogen - hypothetical protein STH850 1 None None None 51892459 Common - putative S-layer associated protein STH1321 25 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 51892067 Nonpathogen - hypothetical protein STH929 1 None None None 51893042 Common - putative methyltransferase STH1904 68 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51892929 Nonpathogen - hypothetical protein STH1791 1 None None None 51893859 Nonpathogen - hypothetical protein STH2721 6 None None None 51894321 Common - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase STH3186 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 51892690 Common - hypothetical protein STH1552 6 COG0456 RimI, Acetyltransferases General function prediction only 51892233 Common - potassium uptake system protein STH1095 84 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51893869 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate ligase STH2731 209 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 51892685 Common - aspartate-semialdehyde dehydrogenase STH1547 221 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 51893899 Common - hypothetical protein STH2761 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 51892806 Common - cytidylate kinase STH1668 205 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 51891765 Common - hypothetical protein STH627 42 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 51892496 Common - heat-shock protein Hsp33 STH1358 107 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 51891915 Common - glucose-1-phosphate thymidylyltransferase STH777 231 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 51891957 Common - hypothetical protein STH819 33 COG1427 COG1427, Predicted periplasmic solute-binding protein General function prediction only 51892212 Nonpathogen - transcriptional regulator, CheY-like STH1074 4 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51894112 Common fliS flagellar protein STH2976 70 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 51892915 Common - hypothetical protein STH1777 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 51891726 Common rpoD RNA polymerase sigma factor RpoD STH588 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 51892421 Common - iron-siderophore uptake ABC system ATP-binding component STH1283 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 51891820 Nonpathogen - hypothetical protein STH682 2 None None None 51893366 Common - hypothetical protein STH2228 76 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 51891580 Common tnaT sodium- and chloride-dependent transporter, TnaT STH442 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 51892867 Common - hypothetical protein STH1729 6 None None None 51893058 Common - glycine dehydrogenase subunit 1 STH1920 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 51891546 Common - putative chromate reductase STH408 123 COG0431 COG0431, Predicted flavoprotein General function prediction only 51894200 Common rplN 50S ribosomal protein L14 STH3065 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 51891168 Common - putative lipoprotein STH30 128 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 51892353 Nonpathogen - putative cell division protein STH1215 18 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 51892536 Nonpathogen - putative heat shock protein STH1398 2 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 51892384 Common - tagatose-6-phosphate kinase STH1246 109 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 51893421 Nonpathogen - hypothetical protein STH2283 1 None None None 51892288 Common - hypothetical protein STH1150 30 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 51893890 Common - ABC transporter ATP-binding protein STH2752 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51892275 Common - cysteine synthase STH1137 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 51893473 Common - Fe-S oxidoreductase STH2335 123 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 51894106 Nonpathogen - hypothetical protein STH2970 1 None None None 51893766 Common - glycine betaine/carnitine/choline ABC transporter permease protein STH2628 162 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 51893654 Common - ABC transporter permease protein STH2516 188 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51893415 Nonpathogen - hypothetical protein STH2277 5 None None None 51892060 Nonpathogen - hypothetical protein STH922 1 None None None 51893717 Nonpathogen - hypothetical protein STH2579 1 None None None 51891941 Common - putative branched chain amino acid ABC transporter substrate-binding protein STH803 134 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51893242 Common gerKC2 spore germination protein KC STH2104 15 None None None 51892366 Common - hypothetical protein STH1228 48 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 51891701 Common - GntR family transcriptional regulator STH563 132 COG2188 PhnF, Transcriptional regulators Transcription 51893149 Common - manganese transport transcriptional regulator STH2011 84 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 51894141 Common flgC flagella basal body rod protein STH3005 123 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 51892443 Common - hypothetical protein STH1305 23 None None None 51892409 Common - glycine-rich RNA-binding protein STH1271 63 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 51892114 Common - ABC transporter ATP-binding protein STH976 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51891911 Common - ribose ABC transporter ATP-binding protein STH773 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 51893989 Common - MutT-like protein STH2851 91 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51892918 Nonpathogen - hypothetical protein STH1780 1 None None None 51891581 Nonpathogen - hypothetical protein STH443 1 None None None 51893388 Common - hypothetical protein STH2250 6 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893887 Common - hypothetical protein STH2749 35 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 51893984 Common - hypothetical protein STH2846 86 COG2968 COG2968, Uncharacterized conserved protein Function unknown 51891372 Common - diaminopimelate epimerase STH234 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 51893728 Common - selenophosphate synthetase STH2590 141 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 51893087 Common - shikimate kinase STH1949 194 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 51894473 Common - putative alpha-hemolysin STH3339 185 COG0759 COG0759, Uncharacterized conserved protein Function unknown 51891473 Nonpathogen - hypothetical protein STH335 1 None None None 51893547 Nonpathogen - hypothetical protein STH2409 1 None None None 51891789 Common - iron ABC transporter substrate-binding protein STH651 160 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 51892030 Nonpathogen - hypothetical protein STH892 1 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51892671 Common - putative dUTPase STH1533 142 COG0756 Dut, dUTPase Nucleotide transport and metabolism 51893753 Nonpathogen - hypothetical protein STH2615 1 None None None 51891773 Common - putative beta-lactamase STH635 146 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 51894385 Common - hypothetical protein STH3250 22 COG3583 COG3583, Uncharacterized protein conserved in bacteria Function unknown 51893191 Nonpathogen - hypothetical protein STH2053 1 None None None 51893683 Common - conserved hypothetical protein containing LPG-repeat STH2545 5 COG5180 PBP1, Protein interacting with poly(A)-binding protein RNA processing and modification 51891557 Nonpathogen - small acid-soluble spore protein STH419 1 None None None 51892077 Nonpathogen - hypothetical protein STH939 1 None None None 51891948 Common - transcriptional regulator STH810 65 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 51893563 Common - coproporphyrinogen III oxidase STH2425 188 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 51891572 Common - putative nicotinate mononucleotide adenylyltransferase STH434 188 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 51893329 Common - hypothetical protein STH2191 189 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 51893289 Nonpathogen - hypothetical protein STH2151 1 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51891392 Common - ABC transporter permease protein STH254 100 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 51891829 Common - two-component sensor histidine kinase STH691 215 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51894022 Common - aldehyde ferredoxin oxidoreductase STH2886 57 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 51892848 Common - hypothetical protein STH1710 16 COG3679 COG3679, Uncharacterized conserved protein Function unknown 51891510 Common mreB cell shape determining protein STH372 229 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 51892977 Nonpathogen - hypothetical protein STH1839 1 None None None 51892151 Common - polysaccharide deacetylase STH1013 112 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51891796 Common - oxidoreductase STH658 186 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 51891983 Common - RNA polymerase ECF-type sigma factor STH845 177 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51893556 Nonpathogen - hypothetical protein STH2418 1 None None None 51894001 Common - hypothetical protein STH2863 25 COG2108 COG2108, Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme General function prediction only 51892142 Common - hypothetical protein STH1004 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 51891193 Common - hypothetical protein STH55 69 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 51892824 Common - aspartokinase II STH1686 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 51893880 Common - putative transporter STH2742 146 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51892228 Common - hypothetical protein STH1090 14 None None None 51894334 Common - cell cycle protein STH3199 223 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 51892324 Common - methylmalonyl-CoA mutase, N-terminal domain STH1186 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 51893037 Nonpathogen - hypothetical protein STH1899 2 None None None 51892944 Common - phosphoribosylaminoimidazole carboxylase I STH1806 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 51893977 Common hisS2 histidyl-tRNA synthetase STH2839 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892972 Nonpathogen - hypothetical protein STH1834 1 None None None 51891896 Common - ABC transporter permease protein STH758 154 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51892127 Common - D-alanyl-D-alanine carboxypeptidase-like protein STH989 157 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51894360 Nonpathogen - hypothetical protein STH3225 1 None None None 51892599 Nonpathogen - hypothetical protein STH1461 1 None None None 51891755 Nonpathogen - hypothetical protein STH617 1 None None None 51891333 Nonpathogen - hypothetical protein, alanine-rich STH195 5 COG5401 COG5401, Spore germination protein General function prediction only 51892158 Nonpathogen - hypothetical protein STH1020 1 COG0316 IscA, Uncharacterized conserved protein Function unknown 51892903 Common - glycine-rich RNA-binding protein STH1765 64 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 51893373 Common - pyridoxal phosphate biosynthetic protein variant STH2235 149 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 51894232 Common - two-component sensor histidine kinase STH3097 84 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51891634 Common - mutT/nudix family protein STH496 8 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893455 Nonpathogen - hypothetical protein STH2317 1 None None None 51891753 Nonpathogen - hypothetical protein STH615 2 None None None 51893351 Nonpathogen - hypothetical protein STH2213 1 None None None 51891873 Common - cytochrome C biogenesis protein STH735 44 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 51892418 Common - N-acetylglucosamine-6-phosphate deacetylase STH1280 119 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 51893850 Common - putative glycosyl transferase STH2712 229 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51894318 Common - putative transcriptional regulator similar to Bvg accessory factor STH3183 114 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 51893734 Common - hypothetical protein STH2596 25 COG3879 COG3879, Uncharacterized protein conserved in bacteria Function unknown 51894396 Common - putative chromosome replication initiation protein STH3261 13 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 51892703 Common - 4-hydroxybenzoate octaprenyltransferase STH1565 148 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 51892048 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase STH910 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 51893392 Common - hypothetical protein STH2254 83 None None None 51892564 Common - ABC transporter ATP-binding protein STH1426 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51893080 Common - PTS system fructose/mannose-specific IIC component STH1942 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 51891930 Nonpathogen - hypothetical protein STH792 2 None None None 51893409 Common - DNA polymerase III-like protein STH2271 109 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 51894404 Common - conserved membrane-associated protein STH3270 33 COG2323 COG2323, Predicted membrane protein Function unknown 51892784 Common mgsA methylglyoxal synthase STH1646 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 51892721 Common - pyrazinamidase/nicotinamidase STH1583 17 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 51892788 Common - hypothetical protein STH1650 46 COG0730 COG0730, Predicted permeases General function prediction only 51892669 Common - polynucleotide phosphorylase/polyadenylase STH1531 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 51891434 Common - oligoeptide ABC transporter ATP-binding protein STH296 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 51891256 Common - S-adenosylmethionine synthetase STH118 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 51894024 Nonpathogen - hypothetical protein STH2888 2 None None None 51892662 Common - exopolyphosphatase-related protein STH1524 76 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 51894160 Common - ABC transporter substrate-binding protein STH3024 58 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 51891202 Common - hypothetical protein STH64 63 COG3246 COG3246, Uncharacterized conserved protein Function unknown 51893799 Nonpathogen - hypothetical protein STH2661 1 None None None 51892713 Common - hypothetical protein STH1575 35 None None None 51892169 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase STH1031 210 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 51894306 Common - glycine-rich RNA-binding protein STH3171 63 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 51893416 Nonpathogen - hypothetical protein STH2278 3 None None None 51891188 Common - putative transposase subunit STH50 29 None None None 51891294 Common - phosphomethylpyrimidine kinase STH156 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 51894239 Nonpathogen - hypothetical protein STH3104 1 None None None 51892730 Common nuoG1 NADH dehydrogenase I subunit G STH1592 205 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51894394 Common - arginine/lysine/ornithine decarboxylase STH3259 89 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 51893943 Common - glutamate/leucine dehydrogenase STH2805 174 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 51893218 Common - hypothetical protein STH2080 3 None None None 51893789 Common - putative oxidoreductase STH2651 111 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 51892374 Common - sugar ABC transporter substrate-binding protein STH1236 104 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 51892725 Common nuoB1 NADH dehydrogenase I subunit B STH1587 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 51892186 Nonpathogen - hypothetical protein STH1048 1 None None None 51893101 Common - hypothetical protein STH1963 5 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 51892199 Common - glutamine ABC transporter permease protein STH1061 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51893106 Common - PTS system glucose-specific IIA component STH1968 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 51893832 Common spoVB stage V sporulation protein B STH2694 31 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 51892652 Common - haloacid dehalogenase-like hydrolase STH1514 127 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 51894372 Common - hypothetical protein STH3237 19 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 51891418 Nonpathogen - hypothetical protein STH280 1 COG4194 COG4194, Predicted membrane protein General function prediction only 51892398 Common - dihydroorotate dehydrogenase catalytic subunit STH1260 225 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 51893918 Nonpathogen - hypothetical protein STH2780 1 None None None 51891311 Common - thioredoxin family protein STH173 158 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 51891900 Common - phosphate ABC transporter permease protein STH762 223 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51893562 Common - hypothetical protein STH2424 121 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 51891148 Common serS seryl-tRNA synthetase STH10 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 51893071 Common - iron ABC transporter ATP-binding protein STH1933 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 51893484 Common - hypothetical protein STH2346 36 None None None 51893236 Common - cytochrome C oxidase subunit III STH2098 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 51892607 Common - 16S rRNA processing protein STH1469 194 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 51892137 Nonpathogen - hypothetical protein STH999 1 None None None 51894253 Common - hypothetical protein STH3118 39 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 51891505 Common - folylpolyglutamate synthase STH367 218 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 51891426 Nonpathogen - hypothetical protein STH288 1 None None None 51892104 Nonpathogen - hypothetical protein STH966 1 None None None 51893185 Common - cytochrome C peroxidase STH2047 95 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 51892109 Common - SrfB or ComAB STH971 109 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 51891522 Common - tungstate ABC transporter permease STH384 62 COG2998 TupB, ABC-type tungstate transport system, permease component Coenzyme metabolism 51892897 Common - 2-methylthioadenine synthetase STH1759 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 51892615 Nonpathogen - hypothetical protein STH1477 1 None None None 51892550 Common - indole-3-glycerol-phosphate synthase STH1412 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 51894448 Common - adenylosuccinate synthetase STH3314 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 51891215 Common - ribose 5-phosphate isomerase STH77 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 51892641 Nonpathogen - hypothetical protein STH1503 1 None None None 51893991 Common - phosphoribosylaminoimidazole synthetase STH2853 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 51891966 Common - putative Xaa-Pro dipeptidase STH828 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 51894347 Common - ABC transporter ATP-binding protein STH3212 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51892779 Common gerKC2 spore germination protein KC STH1641 14 None None None 51891235 Common - GntR family transcriptional regulator STH97 158 COG2186 FadR, Transcriptional regulators Transcription 51892014 Common - death on curing protein STH876 75 COG3654 Doc, Prophage maintenance system killer protein General function prediction only 51892620 Common gidA2 tRNA (uracil-5-)-methyltransferase Gid STH1482 194 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 51893229 Nonpathogen - hypothetical protein STH2091 1 None None None 51893153 Common - ABC transporter ATP-binding protein STH2015 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51893596 Common - glycerophosphodiester phosphodiesterase STH2458 180 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 51892023 Common - putative methyl transferase STH885 194 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51891210 Common - hypothetical protein STH72 31 COG3872 COG3872, Predicted metal-dependent enzyme General function prediction only 51893147 Common - hypothetical protein STH2009 104 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 51892873 Common - hypothetical protein STH1735 8 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 51893528 Common - cysteine desulfurase STH2390 238 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 51893624 Common paaA phenylacetic acid degradation protein STH2486 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 51891411 Common - transposase subunit STH273 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51893098 Common - ABC-transporter ATP-binding protein STH1960 247 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893948 Common - ubiquinone/menaquinone biosynthesis methyltransferase STH2810 169 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51893763 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type STH2625 197 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 51892246 Common - oligopeptide ABC transporter permease protein STH1108 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893034 Nonpathogen - hypothetical protein STH1896 1 None None None 51893864 Common - group II intron-encoding maturase, N-terminally truncated STH2726 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51891394 Common - hypothetical protein STH256 8 None None None 51894323 Common - dihydropteroate synthase STH3188 217 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 51892235 Common - rRNA methyltransferase STH1097 45 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 51891476 Common - inorganic pyrophosphatase STH338 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 51892740 Common - ferrichrome ABC transporter permease protein STH1602 170 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 51893534 Nonpathogen - hypothetical protein STH2396 1 None None None 51893001 Common - hypothetical protein STH1863 10 None None None 51893663 Common - type II restriction-modification system DNA methylase STH2525 136 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 51893782 Common - hypothetical protein STH2644 7 None None None 51893998 Common - adenylosuccinate lyase STH2860 238 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 51892814 Nonpathogen - hypothetical protein STH1676 1 None None None 51891246 Common - hypothetical protein STH108 129 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51894016 Common - hypothetical protein STH2880 71 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51893247 Nonpathogen - hypothetical protein STH2109 7 None None None 51893220 Common - molybdopterin oxidoreductase membrane subunit STH2082 50 COG5557 COG5557, Polysulphide reductase Energy production and conversion 51892349 Common - UDP-N-acetylenolpyruvoylglucosamine reductase STH1211 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 51893955 Common - putative glycosyl transferase STH2817 178 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51892755 Common - branched chain amino acid ABC transporter ATP-binding protein STH1617 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51893493 Common - hypothetical protein STH2355 167 COG0467 RAD55, RecA-superfamily ATPases implicated in signal transduction Signal transduction mechanisms 51892339 Common - putative S-adenosylmethionine-dependent methyltransferase STH1201 216 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 51894212 Common - elongation factor Tu STH3077 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 51894136 Common fliI flagellar-specific ATP synthase STH3000 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 51893631 Common - hypothetical protein STH2493 3 None None None 51892301 Common - hypothetical protein STH1163 11 COG5651 COG5651, PPE-repeat proteins Cell motility and secretion 51894010 Common - argininosuccinate synthase STH2874 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 51892079 Nonpathogen - hypothetical protein STH941 1 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51891457 Common - hypothetical protein STH319 31 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51891862 Common spoVR stage V sporulation protein R STH724 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 51893828 Common - two-component response regulator variant STH2690 123 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 51893811 Common - GntR family transcriptional regulator STH2673 121 COG1725 COG1725, Predicted transcriptional regulators Transcription 51893394 Nonpathogen - hypothetical protein STH2256 9 None None None 51892858 Nonpathogen - small acid-soluble spore protein STH1720 5 None None None 51893489 Common - hypothetical protein STH2351 3 None None None 51891326 Common - sugar isomerase STH188 140 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 51891699 Common - lipoate-protein ligase STH561 85 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 51893744 Nonpathogen - putative acetyltransferase STH2606 4 COG3153 COG3153, Predicted acetyltransferase General function prediction only 51893187 Common - iron-containing alcohol dehydrogenase STH2049 175 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51894441 Common - two-component sensor histidine kinase STH3307 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51893647 Nonpathogen - hypothetical protein STH2509 1 None None None 51892050 Nonpathogen - hypothetical protein STH912 1 None None None 51893745 Common - hypothetical protein STH2607 56 COG2968 COG2968, Uncharacterized conserved protein Function unknown 51892851 Common - ATP-dependent DNA helicase STH1713 200 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 51892480 Common - primosomal replication factor Y STH1342 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 51893777 Common - succinate dehydrogenase flavoprotein subunit STH2639 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 51894056 Common - acetyltransferase STH2920 159 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 51894249 Common - hypothetical protein STH3114 38 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 51894256 Common - group II intron-encoding maturase STH3121 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51891228 Common - F0F1 ATP synthase subunit gamma STH90 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 51892980 Common - 1-deoxy-D-xylulose-5-phosphate synthase STH1842 229 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 51893008 Nonpathogen - hypothetical protein STH1870 2 COG0170 SEC59, Dolichol kinase Lipid metabolism 51891628 Common - amino acid ABC transporter substrate-binding protein STH490 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51891730 Common - ketoreductase STH592 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51891310 Common - polysaccharide deacetylase STH172 110 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51891745 Common - putative ABC transporter permease protein STH607 132 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51893678 Common - gamma-glutamyl kinase STH2540 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 51891265 Common - sodium-dependent transporter STH127 139 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 51893254 Common - isopropylmalate isomerase large subunit STH2116 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 51893325 Common - hypothetical protein STH2187 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 51893905 Common nuoN2 NADH dehydrogenase I subunit N STH2767 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 51893138 Common alaS1 alanyl-tRNA synthetase STH2000 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51891207 Common - penicillin amidase STH69 79 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 51891514 Common minD1 septum site-determining protein STH376 153 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 51894271 Common - transcriptional repressor of class III stress genes STH3136 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 51893127 Nonpathogen - hypothetical protein STH1989 1 None None None 51893922 Common - hypothetical protein STH2784 8 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51891166 Common - RNA polymerase ECF-type sigma factor STH28 162 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51894017 Common - N-acetylornithine aminotransferase STH2881 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 51892382 Common - orotidine-5-phosphate decarboxylase STH1244 69 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 51893172 Common - ABC transporter ATP-binding protein STH2034 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 51894075 Nonpathogen - hypothetical protein STH2939 1 None None None 51893517 Nonpathogen - hypothetical protein STH2379 1 None None None 51894170 Nonpathogen - hypothetical protein STH3034 6 COG3874 COG3874, Uncharacterized conserved protein Function unknown 51893726 Nonpathogen - putative pyrroline-5-carboxylate reductase STH2588 4 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 51891305 Common - excinuclease ABC subunit A STH167 243 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 51892129 Nonpathogen - hypothetical protein STH991 11 COG4911 COG4911, Uncharacterized conserved protein Function unknown 51891341 Common - stage V sporulation protein AD STH203 15 None None None 51891405 Nonpathogen - hypothetical protein STH267 1 None None None 51891851 Common dmsA2 anaerobic dimethyl sulfoxide reductase subunit A STH713 180 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51893806 Common gluS glutamyl-tRNA synthetase STH2668 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 51891867 Common - cytochrome C nitrite reductase catalytic subunit STH729 41 COG3303 NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit Inorganic ion transport and metabolism 51891834 Common - ABC transporter permease protein STH696 8 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 51892392 Common - hypothetical protein STH1254 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 51893448 Common - transketolase C-terminal subunit STH2310 199 COG3958 COG3958, Transketolase, C-terminal subunit Carbohydrate transport and metabolism 51892478 Common rpoZ RNA polymerase omega subunit STH1340 26 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 51892168 Common - aspartate aminotransferase STH1030 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 51892333 Common - glycerol kinase STH1195 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 51894315 Common - molybdopterin converting factor-like protein STH3180 160 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 51894292 Common greA2 transcription elongation factor STH3157 204 COG0782 GreA, Transcription elongation factor Transcription 51893992 Common - phosphoribosylpyrophosphate amidotransferase STH2854 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 51892464 Common - heat shock protein STH1326 100 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 51892835 Common - S-adenosyl-L-homocysteine hydrolase STH1697 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 51892657 Common nusA transcription elongation factor NusA STH1519 220 COG0195 NusA, Transcription elongation factor Transcription 51891978 Common - putative ATPase involved in chromosome partitioning STH840 231 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51891498 Common - Lon-like ATP-dependent protease STH360 243 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 51892889 Common - putative transporter protein STH1751 157 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 51891805 Common - hypothetical protein STH667 42 None None None 51892653 Nonpathogen - hypothetical protein STH1515 1 None None None 51891739 Common - putative oxidoreductase STH601 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51891529 Common - putative sercretion system protein STH391 37 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 51894358 Common - hypothetical protein STH3223 12 COG1787 COG1787, Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes Defense mechanisms 51893629 Common - hypothetical protein STH2491 36 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 51894207 Common rplB 50S ribosomal protein L2 STH3072 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 51893124 Common - anaerobic sn-glycerol-3-phosphate dehydrogenase subunit A STH1986 135 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 51893686 Nonpathogen - hypothetical protein STH2548 1 None None None 51892939 Common - hypothetical protein STH1801 17 COG0546 Gph, Predicted phosphatases General function prediction only 51894444 Common - hypothetical protein STH3310 5 COG5582 COG5582, Uncharacterized conserved protein Function unknown 51891768 Common - Mut-like protein STH630 4 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51891713 Common glySB glycyl-tRNA synthetase beta chain STH575 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 51892082 Common - hypothetical protein STH944 2 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 51894078 Common - aminopeptidase-like protein STH2942 47 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51893934 Nonpathogen - hypothetical protein STH2796 1 COG1694 MazG, Predicted pyrophosphatase General function prediction only 51892518 Common - N-acetylmuramoyl-L-alanine amidase-like protein STH1380 8 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 51891387 Common - enolase STH249 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 51892927 Common - polysaccharide deacetylase STH1789 94 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51893318 Common - glycerol-3-phosphate ABC transporter permease protein STH2180 154 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 51892294 Common - ABC transporter ATP-binding protein STH1156 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51893342 Nonpathogen - hypothetical protein STH2204 5 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 51891741 Nonpathogen - hypothetical protein STH603 1 None None None 51893423 Nonpathogen - hypothetical protein STH2285 9 None None None 51894174 Common - Thymidine kinase STH3038 54 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 51892503 Common - putative surface adhesion STH1365 4 COG3936 COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation Carbohydrate transport and metabolism 51893330 Common - putative ABC transporter substrate-binding protein STH2192 119 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51892524 Common - putative cell division control protein STH1386 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 51892090 Common - PTS system cellobiose-specific IIC component STH952 34 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 51893774 Common - 2-oxoglutarate/malate translocator STH2636 90 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 51894332 Common - MutT-like protein STH3197 185 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893979 Common - Na+/H+ antiporter STH2841 84 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51894119 Nonpathogen - hypothetical protein, proline-rich STH2983 1 COG5373 COG5373, Predicted membrane protein Function unknown 51892173 Nonpathogen - hypothetical protein, glycine-rich STH1035 1 None None None 51891905 Nonpathogen - hypothetical protein STH767 19 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 51891483 Common - putative phosphoesterase STH345 63 COG0622 COG0622, Predicted phosphoesterase General function prediction only 51892032 Common - group II intron-encoding maturase STH894 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51891248 Common - polysulfide reductase subunit A, C-terminal domain STH110 154 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51891959 Common - branched chain amino acid ABC transporter substrate-binding protein STH821 142 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51892707 Common - hypothetical protein STH1569 14 None None None 51891927 Common - hypothetical protein STH789 21 COG1787 COG1787, Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes Defense mechanisms 51892387 Common agaB PTS system N-acetylgalactosamine-specific IIB component STH1249 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 51892268 Common - transposase STH1130 85 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892457 Common - malate oxidoreductase STH1319 202 COG0281 SfcA, Malic enzyme Energy production and conversion 51894003 Common - glycine reductase complex C STH2865 9 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 51892428 Nonpathogen - hypothetical protein STH1290 2 None None None 51893276 Nonpathogen feoA ferrous ion uptake protein A STH2138 6 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 51894425 Common - copper homeostasis protein STH3291 59 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 51893021 Common - LytR family transcriptional regulator STH1883 63 COG1316 LytR, Transcriptional regulator Transcription 51891763 Common - hypothetical protein STH625 32 COG2966 COG2966, Uncharacterized conserved protein Function unknown 51891174 Common - hypothetical protein STH36 7 None None None 51891368 Common - glutamate synthase large subunit STH230 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 51893386 Nonpathogen - hypothetical protein STH2248 1 None None None 51891963 Common - branched chain amino acid ABC transporter ATP-binding protein STH825 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51892427 Nonpathogen - hypothetical protein STH1289 1 None None None 51893041 Common - ABC transporter substrate-binding protein STH1903 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51892683 Common - dipicolinate synthase subunit A STH1545 14 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 51891366 Common - putative polyferredoxin STH228 47 COG1148 HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins Energy production and conversion 51893593 Nonpathogen - hypothetical protein STH2455 1 None None None 51893291 Common - lipoyl synthase STH2153 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 51891284 Common - oligopeptide ABC transporter permease protein STH146 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893265 Common - penicillin-binding protein STH2127 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 51891542 Common - putative NADH-ubiquinone oxidoreductase STH404 207 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892252 Common - hypothetical protein STH1114 29 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 51891724 Common - pyruvate phosphate dikinase STH586 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 51893194 Common narB nitrate reductase STH2056 196 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51892869 Common - cytochrome C biogenesis protein STH1731 53 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 51891791 Common - iron ABC transporter ATP-binding protein STH653 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 51893581 Common - protein translocase subunit STH2443 217 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 51891674 Nonpathogen - hypothetical protein STH536 1 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 51892355 Common - small basic protein STH1217 25 COG3856 Sbp, Uncharacterized conserved protein (small basic protein) Function unknown 51892509 Common - mannose-1-phosphate guanyltransferase STH1371 205 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 51892748 Common - peptidase T STH1610 62 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 51893056 Common - putative lipoate protein ligase STH1918 73 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 51893962 Common - oligopeptide ABC transporter ATP-binding protein STH2824 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891986 Common - DNA polymerase I STH848 217 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 51893167 Common - ribonuclease HII STH2029 208 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 51894130 Common fliL flagellar synthesis protein STH2994 19 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 51891663 Common lysS1 lysyl-tRNA synthetase STH525 247 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 51893892 Common - class I aminotransferase protein STH2754 226 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 51891864 Common - putative molecular chaperone STH726 147 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 51894219 Common rpoC DNA-directed RNA polymerase subunit beta' STH3084 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 51894285 Nonpathogen - hypothetical protein STH3150 1 None None None 51891494 Common - putative pyridine nucleotide-disulphide oxidoreductase STH356 243 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 51892584 Common - fatty acid biosynthesis transcriptional regulator STH1446 21 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 51894344 Common - iron hydrogenase STH3209 183 COG4624 COG4624, Iron only hydrogenase large subunit, C-terminal domain General function prediction only 51894376 Common spoVG stage V sporulation protein G STH3241 23 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 51894415 Common - hypothetical protein STH3281 35 COG3382 COG3382, Uncharacterized conserved protein Function unknown 51891597 Common - putative endonuclease IV STH459 98 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 51891991 Nonpathogen - hypothetical protein STH853 1 None None None 51893524 Nonpathogen - hypothetical protein STH2386 1 None None None 51893775 Common - succinate dehydrogenase membrane subunit STH2637 28 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 51893131 Nonpathogen - hypothetical protein STH1993 6 None None None 51893607 Nonpathogen - hypothetical protein STH2469 1 None None None 51891607 Common - spermidine/putrescine ABC transporter permease protein STH469 213 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 51891922 Nonpathogen - hypothetical protein, glycine-rich STH784 1 COG4278 COG4278, Uncharacterized conserved protein Function unknown 51892441 Common - putative DNA helicase STH1303 206 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51894452 Common - hypothetical protein STH3318 6 COG4241 COG4241, Predicted membrane protein Function unknown 51892633 Nonpathogen - hypothetical protein STH1495 1 None None None 51892054 Common napG nitrate reductase component, ferredoxin-type protein STH916 59 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 51893927 Nonpathogen - hypothetical protein STH2789 1 None None None 51892155 Nonpathogen - hypothetical protein STH1017 1 None None None 51893379 Nonpathogen - hypothetical protein STH2241 1 None None None 51893443 Common - hypothetical protein STH2305 39 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 51892099 Common - TetR family transcriptional regulator STH961 153 COG1309 AcrR, Transcriptional regulator Transcription 51891533 Nonpathogen - pilus subunit protein STH395 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 51891587 Common - putative acetyltransferase GNAT family STH449 2 COG0456 RimI, Acetyltransferases General function prediction only 51894093 Common - hypothetical protein STH2957 13 COG3859 COG3859, Predicted membrane protein Function unknown 51893742 Common - LysR-family transcriptional regulator STH2604 187 COG0583 LysR, Transcriptional regulator Transcription 51892803 Common recA multifunctional protein involved in homologous recombination STH1665 228 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 51893399 Common - putative DNA modification methylase STH2261 17 COG1041 COG1041, Predicted DNA modification methylase DNA replication, recombination, and repair 51892775 Nonpathogen - hypothetical protein STH1637 1 None None None 51891817 Nonpathogen - hypothetical protein STH679 1 None None None 51893911 Common nuoH2 NADH dehydrogenase I subunit H STH2773 189 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 51892644 Common - ABC transporter permease protein STH1506 167 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 51891590 Common - ABC transporter ATP-binding protein STH452 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51893538 Nonpathogen - hypothetical protein STH2400 1 None None None 51891996 Nonpathogen - hypothetical protein STH858 1 None None None 51894328 Common - urocanate hydratase STH3193 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 51893957 Common - putative oxidoreductase STH2819 209 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892122 Common - group II intron-encoding maturase STH984 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893885 Common - hypothetical protein STH2747 24 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 51894365 Common - non-specific DNA-binding protein STH3230 213 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 51891636 Nonpathogen - hypothetical protein STH498 1 COG4129 COG4129, Predicted membrane protein Function unknown 51893117 Common - uracil-DNA glycosylase STH1979 129 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 51891656 Common - putative molybdopterin oxidoreductase STH518 189 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51892008 Nonpathogen - hypothetical protein STH870 1 None None None 51893214 Common - putative transcriptional regulator STH2076 25 COG1695 COG1695, Predicted transcriptional regulators Transcription 51894125 Common fliR flagellar biosynthetic protein STH2989 122 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 51893610 Common - hypothetical protein STH2472 11 None None None 51894313 Common - class-V aminotransferase STH3178 179 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 51892281 Common sat sulfate adenylyltransferase STH1143 65 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 51893436 Common - DeoR-family transcriptional regulator STH2298 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 51893930 Common - putative proteinase IV STH2792 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51893671 Common - succinyl-CoA synthetase beta subunit STH2533 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 51892495 Nonpathogen - hypothetical protein STH1357 1 None None None 51893303 Nonpathogen - hypothetical protein STH2165 1 None None None 51891973 Nonpathogen - hypothetical protein STH835 1 None None None 51891694 Common - putative transcriptional antiterminator STH556 10 COG3711 BglG, Transcriptional antiterminator Transcription 51893017 Common - ABC transporter permease protein STH1879 188 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 51893619 Nonpathogen - hypothetical protein STH2481 1 None None None 51891841 Common - ABC transporter ATP-binding protein STH703 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51892041 Common - hypothetical protein STH903 15 COG4769 COG4769, Predicted membrane protein Function unknown 51892322 Common - hypothetical protein, aspartate-rich STH1184 17 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 51894362 Nonpathogen - hypothetical protein STH3227 2 None None None 51892448 Common - site-specific DNA-methyltransferase STH1310 125 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 51891798 Nonpathogen - hypothetical protein STH660 3 COG2312 COG2312, Erythromycin esterase homolog General function prediction only 51891565 Common - glycerol-3-phosphate dehydrogenase STH427 148 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 51894439 Nonpathogen - hypothetical protein STH3305 4 None None None 51891205 Common glpX fructose 1,6-bisphosphatase II STH67 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 51893039 Common - hypothetical protein STH1901 7 COG4684 COG4684, Predicted membrane protein Function unknown 51893849 Common - UDP-glucose 4-epimerase STH2711 231 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 51891894 Nonpathogen - hypothetical protein STH756 1 None None None 51891269 Common - hypothetical protein STH131 7 None None None 51891751 Common - hypothetical protein STH613 31 COG2316 COG2316, Predicted hydrolase (HD superfamily) General function prediction only 51892597 Nonpathogen - hypothetical protein STH1459 2 None None None 51893935 Common - lysophospholipase STH2797 155 COG2267 PldB, Lysophospholipase Lipid metabolism 51892070 Common - 4-oxalocrotonate tautomerase STH932 41 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 51891642 Common dnaK Chaperone protein, DnaK STH504 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 51891681 Nonpathogen - oligopeptide ABC transporter permease protein STH543 2 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894411 Common - ABC transporter ATP-binding protein STH3277 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51894268 Common - class III stress response-related ATPase STH3133 229 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 51894288 Common - cytochrome C oxidase heme b and copper-binding subunit STH3153 155 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 51892705 Common - gamma-D-glutamyl-L-diamino acid endopeptidase I STH1567 63 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 51892144 Nonpathogen - hypothetical protein STH1006 1 None None None 51892674 Common cheW3 chemotaxis signal transduction protein STH1536 136 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 51893471 Common - hypothetical protein STH2333 25 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 51894090 Nonpathogen - putative aminopeptidase STH2954 32 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 51892917 Common - hypothetical protein STH1779 77 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 51892042 Common - hypothetical protein STH904 17 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 51892540 Nonpathogen - hypothetical protein STH1402 2 COG0456 RimI, Acetyltransferases General function prediction only 51893407 Nonpathogen - hypothetical protein STH2269 1 None None None 51894406 Common - putative membrane efflux protein STH3272 6 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51891875 Common - oligoendopeptidase STH737 87 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 51892909 Nonpathogen - hypothetical protein STH1771 1 None None None 51891336 Common - glutamine synthetase STH198 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 51892557 Common - 3-phosphoshikimate 1-carboxyvinyltransferase STH1419 216 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 51892739 Common - ferrichrome ABC transporter permease protein STH1601 191 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 51893450 Common - putative PTS system, IIA component STH2312 81 COG3711 BglG, Transcriptional antiterminator Transcription 51893487 Common - 3-deoxy-7-phosphoheptulonate synthase STH2349 186 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 51893848 Nonpathogen - putative transposase STH2710 1 None None None 51894110 Common fliC flagellin STH2974 123 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 51891226 Common - ATP synthase delta subunit STH88 189 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 51893871 Nonpathogen - hypothetical protein STH2733 1 COG3296 COG3296, Uncharacterized protein conserved in bacteria Function unknown 51892222 Common - hypothetical protein STH1084 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 51892229 Common - translation initiation factor IF-3 STH1091 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 51892545 Common - anthranilate synthetase component I STH1407 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 51891448 Common - hypothetical protein STH310 26 None None None 51893193 Common - oxidoreductase similar to anaerobic dimethyl sulfoxide reductase subunit B STH2055 162 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51892966 Common - phosphotransacetylase STH1828 127 COG0280 Pta, Phosphotransacetylase Energy production and conversion 51894048 Common - 3-hydroxybutyryl-CoA dehydrogenase STH2912 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 51892039 Common - ferredoxin STH901 113 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 51893255 Common - LysR family transcriptional regulator STH2117 177 COG0583 LysR, Transcriptional regulator Transcription 51893860 Nonpathogen - hypothetical protein STH2722 1 None None None 51891358 Common - hypothetical protein STH220 14 None None None 51892590 Common - acyl carrier protein STH1452 211 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51893554 Common - catalase/peroxidase STH2416 98 COG0376 KatG, Catalase (peroxidase I) Inorganic ion transport and metabolism 51894230 Common - putative methyl-accepting chemotaxis protein STH3095 14 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51892368 Common divIVA cell-division initiation protein STH1230 46 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 51892407 Common - bacterial luciferase-like monooxygenase STH1269 116 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 51894471 Common jag SpoIIIJ-associated RNA-binding protein STH3337 70 COG1847 Jag, Predicted RNA-binding protein General function prediction only 51893413 Common - transposase STH2275 44 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891913 Common - Xaa-Pro dipeptidase STH775 150 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 51892969 Common - transcriptional regulator STH1831 188 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51893785 Common - membrane transporter similar to multidrug efflux protein STH2647 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51892116 Common - hypothetical protein STH978 14 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 51892981 Common - hypothetical protein STH1843 12 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 51891616 Common - spore peptidoglycan hydrolase STH478 36 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 51894083 Common - putative cyclic nucleotide-binding transcriptional regulator STH2947 168 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51894192 Common rpmD 50S ribosomal protein L30 STH3057 91 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 51891415 Nonpathogen - hypothetical protein STH277 6 None None None 51891579 Common tnaA tryptophanase STH441 45 COG3033 TnaA, Tryptophanase Amino acid transport and metabolism 51892943 Common - putative poly A polymerase STH1805 230 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 51893085 Common - hypothetical protein STH1947 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 51893986 Common - hypothetical protein STH2848 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 51891686 Common - ABC transporter ATP-binding protein STH548 246 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893656 Common - putative thiamine biosynthesis protein STH2518 80 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51893751 Common - cation-transporting ATPase STH2613 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 51892412 Common - putative sphingosine-1-phosphate lyase STH1274 94 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 51891376 Common - phosphate ABC transporter ATP-binding protein STH238 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 51893857 Common - hypothetical protein STH2719 70 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 51893048 Common - type I restriction-modification system DNA methylase STH1910 162 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 51892565 Common - ABC transporter ATP-binding protein STH1427 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51892856 Common - polysaccharide deacetylase STH1718 62 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51892347 Common spoVE stage V sporulation protein E STH1209 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 51891195 Common - putative middle wall protein precursor STH57 80 None None None 51893478 Common - D-allose transporter subunit STH2340 108 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 51893761 Common - amino acid ABC transporter substrate-binding protein STH2623 186 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51893588 Common - alpha-galactosidase/6-phospho-beta-glucosidase STH2450 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 51891827 Common - ABC transporter ATP-binding protein STH689 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51892361 Common spoIIR pro-sigma-E processing factor SpoIIR STH1223 15 None None None 51893061 Common - hypothetical protein STH1923 19 COG1430 COG1430, Uncharacterized conserved protein Function unknown 51891846 Common - branched-chain amino acid ABC transporter ATP-binding protein STH708 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51893466 Common - putative PadR family transcriptional regulator STH2328 30 COG1695 COG1695, Predicted transcriptional regulators Transcription 51893507 Common arsM arsenite S-adenosylmethyltransferase STH2369 205 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51891374 Common - phosphate ABC transporter permease protein STH236 223 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51894159 Common - ABC transporter ATP-binding protein STH3023 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 51893750 Nonpathogen - hypothetical protein STH2612 6 None None None 51893626 Nonpathogen - hypothetical protein STH2488 1 None None None 51891520 Common - tungstate ABC transporter ATP binding protein STH382 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51892871 Common - cytochrome C biogenesis protein STH1733 185 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51894276 Common - phosphoglycolate phosphatase STH3141 124 COG0546 Gph, Predicted phosphatases General function prediction only 51891212 Common - putative protoporphyrinogen oxidase STH74 233 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 51891639 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein STH501 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 51891141 Common - hypothetical protein STH3 52 COG2501 COG2501, Uncharacterized conserved protein Function unknown 51892622 Common - transcriptional repressor CodY STH1484 20 COG4465 CodY, Pleiotropic transcriptional repressor Transcription 51892248 Common - oligopeptide ABC transporter ATP-binding protein STH1110 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893122 Common glpC sn-glycerol-3-phosphate dehydrogenase subunit C STH1984 173 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51892746 Nonpathogen - hypothetical protein STH1608 1 None None None 51894060 Common - group II intron-encoding maturase STH2924 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893536 Common - two-component hybrid sensor and regulator STH2398 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51891217 Common upp uracil phosphoribosyltransferase STH79 166 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 51892816 Nonpathogen - hypothetical protein STH1678 2 None None None 51892979 Common - putative rRNA methylase STH1841 135 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 51891139 Common dnaA chromosomal replication initiation protein STH1 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 51893695 Common - threonine synthase STH2557 148 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 51891467 Common - sporulation specific N-acetylmuramoyl-L-alanine amidase STH329 39 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 51894038 Common - RNA polymerase ECF-type sigma factor variant STH2902 11 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892766 Nonpathogen - hypothetical protein STH1628 3 COG4219 MecR1, Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component Transcription / Signal transduction mechanisms 51892757 Common - heme biosynthesis protein STH1619 139 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 51891455 Nonpathogen - hypothetical protein STH317 1 None None None 51893661 Nonpathogen - conserved domain protein, histidine-rich STH2523 4 None None None 51893552 Nonpathogen - hypothetical protein STH2414 1 None None None 51893638 Common - 5-methyltetrahydrofolate S-homocysteine methyltransferase STH2500 177 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 51892860 Common - cyanophycinase STH1722 20 COG4242 CphB, Cyanophycinase and related exopeptidases Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 51891417 Nonpathogen - hypothetical protein STH279 1 None None None 51891976 Common - pyruvate kinase STH838 240 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 51892559 Common - putative aerotaxis receptor protein STH1421 162 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51891439 Common - hypothetical protein STH301 67 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 51891771 Common - ABC transporter ATP-binding protein STH633 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51891737 Common - oligopeptide ABC transporter ATP-binding protein STH599 240 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893893 Common - ferredoxin-like protein STH2755 20 COG0633 Fdx, Ferredoxin Energy production and conversion 51894014 Nonpathogen - hypothetical protein STH2878 3 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51892475 Common - hypothetical protein STH1337 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 51893222 Common - transposase STH2084 48 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893340 Common - hypothetical protein STH2202 11 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 51892618 Common - hypothetical protein STH1480 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 51892986 Common - O-sialoglycoprotein endopeptidase STH1848 245 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 51894029 Nonpathogen - hypothetical protein STH2893 1 None None None 51891233 Common - glycolate oxidase STH95 166 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51894128 Common fliO flagellar assembly protein STH2992 2 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 51892080 Common - putative nucleotidyltransferase STH942 2 None None None 51894392 Common - hypothetical protein STH3257 20 COG3870 COG3870, Uncharacterized protein conserved in bacteria Function unknown 51892340 Nonpathogen - hypothetical protein STH1202 1 None None None 51891423 Common - transposase, partial STH285 29 None None None 51894153 Common - hypothetical protein STH3017 6 COG2221 DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits Energy production and conversion 51893287 Common - ArsR family transcriptional regulator STH2149 22 COG0640 ArsR, Predicted transcriptional regulators Transcription 51894031 Nonpathogen - hypothetical protein STH2895 1 None None None 51894054 Common - UDP-N-acetylmuramate-alanine ligase STH2918 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 51893141 Nonpathogen - hypothetical protein STH2003 2 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 51891960 Common - branched-chain amino acid ABC transporter permease protein STH822 150 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51892711 Nonpathogen - hypothetical protein STH1573 1 None None None 51893573 Common - oligoendopeptidase STH2435 85 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 51891200 Common - putative serine protease STH62 74 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 51892106 Common - 3-oxoacyl-(acyl-carrier protein) reductase STH968 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51894237 Common - putative formate dehydrogenase formation protein STH3102 42 COG3058 FdhE, Uncharacterized protein involved in formate dehydrogenase formation Posttranslational modification, protein turnover, chaperones 51892627 Nonpathogen - hypothetical protein STH1489 1 None None None 51893301 Common - branched-chain alpha-keto acid dehydrogenase E3 STH2163 239 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 51894162 Common - serine proteinase inhibitor STH3026 29 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 51894067 Nonpathogen - hypothetical protein STH2931 4 None None None 51892786 Nonpathogen - hypothetical protein STH1648 1 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 51893216 Common - hypothetical protein STH2078 13 None None None 51894290 Common - hypothetical protein STH3155 17 COG4454 COG4454, Uncharacterized copper-binding protein Inorganic ion transport and metabolism 51894297 Common - two-component response regulator STH3162 217 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892197 Nonpathogen - hypothetical protein, alanine-rich STH1059 1 None None None 51891869 Common - two-component response regulator STH731 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51892825 Nonpathogen - hypothetical protein STH1687 3 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 51893249 Common - hypothetical protein STH2111 50 COG2510 COG2510, Predicted membrane protein Function unknown 51893792 Common - oligopeptide ABC transporter permease protein STH2654 222 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894228 Common rpmG 50S ribosomal protein L33 STH3093 83 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 51893878 Common - ATP-dependent helicase STH2740 128 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 51894304 Common - hypothetical protein STH3169 92 COG2947 COG2947, Uncharacterized conserved protein Function unknown 51891158 Common - group II intron-encoding maturase STH20 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51892396 Common - dihydroorotase STH1258 213 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 51892002 Common - cell wall hydrolase STH864 6 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 51891622 Nonpathogen - hypothetical protein STH484 1 None None None 51894374 Common - ribose-phosphate pyrophosphokinase STH3239 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 51892313 Common - RNA polymerase ECF-type sigma factor STH1175 170 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51893565 Common - MarR family transcriptional regulator STH2427 4 COG1846 MarR, Transcriptional regulators Transcription 51893830 Common - chorismate mutase/prephenate dehydratase STH2692 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 51892946 Common - ABC transporter permease protein STH1808 187 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 51891446 Common - transposase STH308 80 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892880 Common - ABC transporter permease protein STH1742 5 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 51894251 Common - dihydrofolate reductase STH3116 146 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 51892072 Common - ferredoxin STH934 122 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 51891403 Common - hypothetical protein STH265 64 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 51892135 Common - molybdenum ABC transporter permease protein STH997 211 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 51892901 Nonpathogen - hypothetical protein STH1763 3 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 51891356 Common - ABC transporter ATP-binding protein STH218 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51891283 Common - oligopeptide ABC transporter permease protein STH145 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893884 Common - hypothetical protein STH2746 5 None None None 51893578 Common - magnesium chelatase STH2440 53 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 51892044 Common - acylaminoacyl-peptidase STH906 193 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51892696 Common - ATP-dependent clp protease proteolytic subunit STH1558 16 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51891409 Nonpathogen - hypothetical protein STH271 1 None None None 51891313 Nonpathogen - hypothetical protein STH175 1 None None None 51892592 Common spoVS stage V sporulation protein S STH1454 24 COG2359 SpoVS, Uncharacterized protein conserved in bacteria Function unknown 51893104 Nonpathogen - hypothetical protein STH1966 1 None None None 51893189 Common - aldehyde ferredoxin oxidoreductase STH2051 57 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 51892609 Common rplS 50S ribosomal protein L19 STH1471 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 51894418 Common - hypothetical protein STH3284 64 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 51891906 Common - putative class-III aminotransferase STH768 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 51894046 Common - hypothetical protein STH2910 13 None None None 51891432 Nonpathogen - putative acetyltransferase STH294 3 COG0456 RimI, Acetyltransferases General function prediction only 51892663 Common - tRNA pseudouridine 55 synthase STH1525 244 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 51892782 Common - transcriptional repressor STH1644 174 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 51892573 Common - site-specific DNA-methyltransferase STH1435 18 COG3392 COG3392, Adenine-specific DNA methylase DNA replication, recombination, and repair 51894387 Common metS1 methionyl-tRNA synthetase STH3252 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51891832 Common - ABC transporter ATP-binding protein STH694 237 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893707 Nonpathogen - hypothetical protein STH2569 3 None None None 51892292 Common - putative hydrolase STH1154 87 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51893223 Common - hypothetical protein STH2085 3 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 51891380 Common - phosphoglycerate kinase STH242 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 51892434 Common - transposase-like protein STH1296 31 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891660 Nonpathogen - hypothetical protein STH522 1 None None None 51891722 Common - hypothetical protein STH584 194 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 51893526 Common - hypothetical protein STH2388 8 COG3881 COG3881, Uncharacterized protein conserved in bacteria Function unknown 51892025 Nonpathogen - hypothetical protein STH887 1 None None None 51893994 Common - phosphoribosylformylglycinamidine synthase STH2856 231 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 51891277 Common ftsE cell-division ATP-binding protein STH139 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 51893482 Common - tartrate dehydrogenase STH2344 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 51894463 Nonpathogen - hypothetical protein STH3329 1 None None None 51893965 Common - murein transglycosylase-like protein STH2827 167 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51893688 Common - hypothetical protein STH2550 119 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 51894028 Common - putative N-acetyl-gamma-glutamyl-phosphate reductase STH2892 214 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 51892489 Common - hypothetical protein STH1351 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 51893096 Common sigK sporulation sigma factor SigK STH1958 215 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51892655 Nonpathogen - hypothetical protein STH1517 1 None None None 51892462 Nonpathogen - hypothetical protein STH1324 1 None None None 51893320 Common - pyruvate carboxylase STH2182 239 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 51891308 Nonpathogen - hypothetical protein STH170 1 None None None 51893208 Common - hypothetical protein STH2070 14 None None None 51892166 Common - hydroxylamine reductase STH1028 75 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 51892837 Common - hypothetical protein STH1699 192 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 51892882 Nonpathogen - putative transcription elongation factor STH1744 1 COG0782 GreA, Transcription elongation factor Transcription 51894464 Common - transposase STH3330 44 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893784 Common - GNAT family acetyltransferase STH2646 14 COG3393 COG3393, Predicted acetyltransferase General function prediction only 51893491 Common - hypothetical protein STH2353 142 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 51892330 Common - 5-formyltetrahydrofolate cyclo-ligase STH1192 85 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 51892709 Common - acyl-CoA dehydrogenase, short-chain specific STH1571 166 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 51892951 Common spoIIAB anti-sigma F factor STH1813 26 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 51893019 Common - ABC transporter substrate-binding protein STH1881 180 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 51891348 Common - transcriptional regulatory protein STH210 57 COG2345 COG2345, Predicted transcriptional regulator Transcription 51894104 Common - putative ATP-dependent DNA helicase STH2968 224 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51893347 Common - ABC-type transport permease protein STH2209 44 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 51891527 Common minD2 septum site-determining protein STH389 116 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51891711 Common - hypothetical protein STH573 24 COG4124 ManB, Beta-mannanase Carbohydrate transport and metabolism 51893711 Nonpathogen - hypothetical protein, alanine-rich STH2573 1 None None None 51893498 Common - ABC transporter permease protein STH2360 150 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51891858 Common - acetyl-CoA acetyltransferase STH720 181 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 51893953 Nonpathogen - hypothetical protein STH2815 6 None None None 51894179 Common - ABC-type cobalt transport system ATPase component STH3044 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 51892792 Common - transposase STH1654 6 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 51894422 Common - hypothetical protein STH3288 3 None None None 51892084 Common - Hsp20 family heat shock protein STH946 128 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 51892659 Common - L7AE family 50S ribosomal protein STH1521 19 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 51893404 Common - hypothetical protein STH2266 70 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 51892097 Common - putative Zn-dependent protease STH959 101 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 51893345 Common - hypothetical protein STH2207 101 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 51892530 Common - putative hydrolase STH1392 115 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51893645 Common - hypothetical protein STH2507 22 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 51893010 Common - 2-amino-3-ketobutyrate coenzyme A ligase STH1872 190 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 51892337 Common - hypothetical protein STH1199 21 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 51893006 Common - hypothetical protein STH1868 93 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 51891389 Common - putative esterase STH251 59 COG1647 COG1647, Esterase/lipase General function prediction only 51891492 Common thiH thiamine biosynthesis protein ThiH STH354 64 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 51892482 Common - 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase STH1344 220 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 51893311 Common - ATP-dependent deoxyribonuclease subunit A STH2173 141 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 51891258 Common - putative competence protein ComF STH120 174 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 51892111 Nonpathogen - hypothetical protein STH973 1 None None None 51891550 Common - pyruvate dehydrogenase E1 beta subunit STH412 219 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 51891320 Nonpathogen - hypothetical protein STH182 1 None None None 51892930 Common - hypothetical protein STH1792 4 None None None 51892203 Nonpathogen - hypothetical protein STH1065 1 None None None 51892525 Nonpathogen - hypothetical protein STH1387 4 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 51891889 Common - phosphate ABC transporter phosphate-binding protein STH751 110 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 51891172 Common - Zn-dependent alcohol dehydrogenase and related dehydrogenase STH34 15 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 51894469 Common gidA1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA STH3335 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 51892391 Common - acyl-CoA dehydrogenase, short-chain specific STH1253 158 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 51893067 Common - iron ABC transporter substrate-binding protein STH1929 186 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 51894051 Common - UDP-N-acetylglucosamine enolpyruvyl transferase STH2915 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 51893732 Common - hypothetical protein STH2594 13 COG4997 COG4997, Uncharacterized conserved protein Function unknown 51891803 Common - hypothetical protein STH665 17 None None None 51892842 Common - ABC transporter ATP-binding protein STH1704 248 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51891164 Common - two-component response regulator variant STH26 138 COG4566 TtrR, Response regulator Signal transduction mechanisms 51894446 Common - hypothetical protein STH3312 145 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51894172 Common - hypothetical protein STH3036 36 COG5496 COG5496, Predicted thioesterase General function prediction only 51892511 Common - alpha 1,2 N-acetylglucosamine transferase STH1373 134 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51891262 Nonpathogen - hypothetical protein STH124 1 None None None 51893073 Common - iron ABC transporter substrate-binding protein STH1935 166 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 51891567 Common rplU 50S ribosomal protein L21 STH429 215 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 51892362 Common - hypothetical protein STH1224 14 COG1873 COG1873, Uncharacterized conserved protein Function unknown 51891921 Common - spore coat protein STH783 10 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 51891512 Nonpathogen mreD rod shape-determining protein STH374 2 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 51893032 Common - putative Sec-independent protein translocase STH1894 83 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 51892876 Common - aluminum resistance protein STH1738 69 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 161899036 Common rpsR 30S ribosomal protein S18 STH3319 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 51893903 Common - methyl-accepting chemotaxis protein STH2765 131 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51892879 Common - RNA polymerase sigma factor SigY STH1741 152 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892016 Common - hypothetical protein STH878 82 COG0824 FcbC, Predicted thioesterase General function prediction only 51894273 Nonpathogen - hypothetical protein STH3138 1 None None None 51893594 Common - hypothetical protein STH2456 80 COG1284 COG1284, Uncharacterized conserved protein Function unknown 51891884 Common - phosphate ABC transporter ATP-binding protein STH746 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 51891743 Common - N-acetylglucosamine-6-phosphate deacetylase STH605 119 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 51891729 Nonpathogen - transposase-like protein STH591 1 None None None 51893031 Common - transcriptional regulator STH1893 63 COG1316 LytR, Transcriptional regulator Transcription 51891732 Common - hypothetical protein STH594 10 None None None 51891784 Common - 1-pyrroline-5-carboxylate dehydrogenase STH646 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51894182 Common rpoA DNA-directed RNA polymerase subunit alpha STH3047 217 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 51891454 Nonpathogen - hypothetical protein STH316 1 None None None 51893724 Common - transposase STH2586 55 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893545 Nonpathogen - hypothetical protein STH2407 8 COG2259 COG2259, Predicted membrane protein Function unknown 51892476 Common - hypothetical protein STH1338 33 COG2052 COG2052, Uncharacterized protein conserved in bacteria Function unknown 51892254 Common - putative phosphohydrolase STH1116 86 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 51891705 Common - hypothetical protein STH567 15 None None None 51892736 Common nuoN1 NADH dehydrogenase I subunit N STH1598 206 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 51893932 Nonpathogen - hypothetical protein STH2794 1 None None None 51893725 Common - D-alanyl-D-alanine carboxypeptidase STH2587 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51893502 Common - hypothetical protein STH2364 19 None None None 51892179 Common - two-component response regulator STH1041 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51893543 Nonpathogen - hypothetical protein STH2405 1 None None None 51893842 Common - polysaccharide biosynthesis protein STH2704 56 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 51891825 Common - sugar transport system permease protein STH687 141 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 51892910 Nonpathogen - hypothetical protein STH1772 1 None None None 51893586 Common - PTS system N-acetylglucosamine-specific enzyme IIABC component STH2448 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 51892003 Common - hypothetical protein STH865 5 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 51892405 Common gldA glycerol dehydrogenase STH1267 146 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 51891190 Common - putative transposase subunit STH52 42 None None None 51891149 Common - putative Cu-binding protein STH11 218 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 51893046 Common - type I restriction-modification system endonuclease STH1908 134 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 51894265 Nonpathogen - hypothetical protein STH3130 7 None None None 51892433 Nonpathogen - hypothetical protein STH1295 1 None None None 51894252 Common thyA thymidylate synthase STH3117 143 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 51891352 Common - 3-hydroxybutyryl-CoA dehydrogenase STH214 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 51893022 Common - hypothetical protein STH1884 85 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 51893980 Common - tyrosine phenol-lyase STH2842 44 COG3033 TnaA, Tryptophanase Amino acid transport and metabolism 51892801 Nonpathogen - hypothetical protein STH1663 1 None None None 51891970 Common - cystathionine gamma-lyase STH832 211 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 51893730 Common - DNA helicase-like protein STH2592 3 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 51892365 Common - hypothetical protein STH1227 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 51893825 Common - 2-isopropylmalate synthase STH2687 212 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 51891250 Common - formate dehydrogenase gamma subunit STH112 62 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 51893470 Common dmsA1 anaerobic dimethyl sulfoxide reductase subunit A STH2332 180 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51892118 Common - putative beta-lactamase STH980 80 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51893713 Common - peptidase STH2575 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 51894367 Common spoVB stage V sprulation protein B STH3232 37 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 51892147 Common - glycine-rich RNA-binding protein STH1009 64 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 51893285 Nonpathogen - hypothetical protein STH2147 1 None None None 51894045 Common - hypothetical protein STH2909 2 None None None 51892329 Common - biotin carboxylase STH1191 225 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 51894263 Common radA DNA repair protein RadA STH3128 220 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 51893788 Common - hypothetical protein STH2650 15 COG3595 COG3595, Uncharacterized conserved protein Function unknown 51892531 Common - hypothetical protein STH1393 49 COG2703 COG2703, Hemerythrin Inorganic ion transport and metabolism 51894071 Common - hypothetical protein STH2935 13 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 51894339 Common - hypothetical protein STH3204 29 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 51892732 Common nuoI1 NADH dehydrogenase I subunit I STH1594 188 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 51891700 Common - tagatose-6-phosphate aldose/ketose isomerase STH562 50 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 51891584 Common - hypothetical protein STH446 22 None None None 51892948 Common - diaminopimelate decarboxylase STH1810 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 51893883 Common - oligopeptide ABC transporter substrate-binding protein STH2745 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51894123 Common flhA flagellar biosynthesis protein STH2987 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 51893156 Nonpathogen - hypothetical protein STH2018 1 None None None 51893861 Common - ABC transporter ATP-binding protein STH2723 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51892493 Common - ribulose-5-phosphate 3-epimerase STH1355 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 51891297 Common - medium-chain fatty-acid-CoA ligase STH159 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51891259 Common - carbon storage regulator STH121 77 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 51891204 Common - putative translaldolase STH66 163 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 51891877 Common - multidrug efflux protein STH739 30 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51891631 Common - two-component sensor histidine kinase STH493 155 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51893468 Common dmsC1 anaerobic dimethyl sulfoxide reductase subunit C STH2330 21 COG3302 DmsC, DMSO reductase anchor subunit General function prediction only 51893458 Common - LuxR family transcriptional regulator STH2320 22 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 51891844 Common - branched-chain amino acid ABC transporter permease protein STH706 154 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51893451 Common - oligopeptide ABC transporter permease protein STH2313 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894168 Nonpathogen - hypothetical protein STH3032 2 COG4630 XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A Nucleotide transport and metabolism 51892345 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase STH1207 209 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 51892403 Common - hypothetical protein STH1265 82 COG0393 COG0393, Uncharacterized conserved protein Function unknown 51891638 Common - hypoxanthine-guanine phosphoribosyltransferase STH500 154 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 51893658 Nonpathogen - hypothetical protein STH2520 3 None None None 51894080 Common - hypothetical protein STH2944 143 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 51893973 Common hisH imidazole glycerol phosphate synthase subunit STH2835 215 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 51892958 Common - phosphopentomutase STH1820 74 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 51891947 Common - hypothetical protein STH809 179 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51891339 Common - hypothetical protein STH201 7 None None None 51891445 Nonpathogen - hypothetical protein STH307 1 None None None 51891536 Common - putative secretion ATPase STH398 173 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 51891613 Common - hypothetical protein STH475 80 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 51893966 Nonpathogen - glycine-rich cell wall protein STH2828 1 COG4907 COG4907, Predicted membrane protein Function unknown 51893772 Common - two-component sensor histidine kinase STH2634 151 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51892568 Common - small acid-soluble spore protein STH1430 15 None None None 51892700 Nonpathogen - hypothetical protein STH1562 1 None None None 51893356 Nonpathogen - hypothetical protein STH2218 1 None None None 51894437 Common - hypothetical protein STH3303 162 COG1576 COG1576, Uncharacterized conserved protein Function unknown 51892096 Common - putative hemolysin STH958 215 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 51894423 Common - two-component sensor histidine kinase STH3289 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51892501 Common - glycosyltransferase-like protein STH1363 70 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51893084 Common - 3-isopropylmalate dehydrogenase STH1946 221 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 51893278 Common - two-component response regulator STH2140 202 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51893403 Common - transposase STH2265 80 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891350 Common - enoyl-CoA hydratase/isomerase family protein STH212 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 51891859 Common - putative beta-lactamase STH721 21 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51893143 Common - hypothetical protein STH2005 7 COG5401 COG5401, Spore germination protein General function prediction only 51892968 Common - leucine dehydrogenase STH1830 112 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 51892907 Common - hypothetical protein STH1769 49 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 51894458 Common - hypothetical protein STH3324 51 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 51893718 Nonpathogen - hypothetical protein STH2580 3 None None None 51893263 Common - putative lipase STH2125 143 COG0657 Aes, Esterase/lipase Lipid metabolism 51891179 Common - hypothetical protein STH41 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 51892425 Nonpathogen - hypothetical protein, histidine-rich STH1287 1 None None None 51891944 Nonpathogen - hypothetical protein STH806 1 None None None 51892595 Common - signal recognition particle STH1457 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 51891891 Nonpathogen - hypothetical protein STH753 1 None None None 51892446 Common - putative DNA helicase STH1308 168 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51892542 Common bioY biotin synthesis BioY protein STH1404 8 COG1268 BioY, Uncharacterized conserved protein General function prediction only 51894145 Common fliM flagellar motor switch protein STH3009 108 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 51891460 Common - ribonucleoside-diphosphate reductase alpha subunit STH322 221 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 51892415 Common - PTS system mannose-specific IIA component STH1277 86 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 51894330 Common - putative peptidase STH3195 153 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 51892373 Common - sugar ABC transporter ATP-binding protein STH1235 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 51892689 Common - group II intron-encoding maturase STH1551 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51892976 Nonpathogen - hypothetical protein, proline-rich STH1838 1 None None None 51891338 Nonpathogen - hypothetical protein STH200 3 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 51893511 Nonpathogen - hypothetical protein STH2373 1 None None None 51891671 Common - cytidine deaminase STH533 117 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 51891290 Nonpathogen - hypothetical protein STH152 1 COG3326 COG3326, Predicted membrane protein Function unknown 51892217 Common - endo-1,4-beta-glucanase STH1079 75 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 51893808 Common - Snf2 family helicase-like protein STH2670 117 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 51893794 Nonpathogen - hypothetical protein, serine-rich STH2656 1 None None None 51894181 Common rplQ 50S ribosomal protein L17 STH3046 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 51892646 Common - ABC transporter permease protein STH1508 141 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 51893136 Common - hypothetical protein STH1998 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 51891614 Common rpsT 30S ribosomal protein S20 STH476 77 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 51894283 Common - menaquinol-cytochrome C reductase STH3148 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 51891464 Nonpathogen - hypothetical protein STH326 1 None None None 51892153 Nonpathogen - hypothetical protein STH1015 1 None None None 51891899 Common - phosphate ABC transporter ATP-binding protein STH761 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 51893921 Common - hypothetical protein STH2783 16 COG1728 COG1728, Uncharacterized protein conserved in bacteria Function unknown 51892053 Common - beta-lactamase STH915 41 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51891197 Nonpathogen - hypothetical protein STH59 1 None None None 51892838 Nonpathogen - hypothetical protein STH1700 1 None None None 51893579 Common - putative chelatase STH2441 69 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 51893297 Common - cobalt ABC transporter ATP-binding protein STH2159 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 51894085 Nonpathogen - hypothetical protein STH2949 1 None None None 51893461 Common - hypothetical protein STH2323 51 COG4327 COG4327, Predicted membrane protein Function unknown 51893605 Nonpathogen - hypothetical protein, glycine-rich STH2467 1 None None None 51891740 Common - putative glucose kinase STH602 73 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 51891596 Nonpathogen - hypothetical protein STH458 1 None None None 51891155 Common - spermidine synthase STH17 132 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 51892576 Common - putative RNA methylase STH1438 211 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 51894190 Common secY preprotein translocase subunit SecY STH3055 235 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 51891150 Common - ABC-type dipeptide/oligopeptide/nickel transport systems periplasmic components STH12 119 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 51893817 Common - DNA polymerase I STH2679 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 51891609 Common - spermidine/putrescine ABC transporter ATP-binding protein STH471 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51892995 Nonpathogen spoIIIAF stage III sporulation protein AF STH1857 1 None None None 51891600 Common - hypothetical protein STH462 113 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 51892773 Common - hypothetical protein STH1635 4 COG2234 Iap, Predicted aminopeptidases General function prediction only 51892526 Common - putative permease STH1388 89 COG2391 COG2391, Predicted transporter component General function prediction only 51892999 Common spoIIIAB stage III sporulation protein SpoAB STH1861 12 None None None 51892200 Common - glutamine ABC transporter ATP-binding protein STH1062 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51892455 Common - 2-oxoacid:ferredoxin oxidoreductase alpha subunit STH1317 118 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51894161 Nonpathogen - hypothetical protein STH3025 1 COG2259 COG2259, Predicted membrane protein Function unknown 51894199 Common rplX 50S ribosomal protein L24 STH3064 160 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 51891961 Common - branched-chain amino acid ABC transporter permease protein STH823 137 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51892693 Common - hypothetical protein STH1555 27 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51893509 Nonpathogen - hypothetical protein STH2371 1 None None None 51891658 Common - hypothetical protein STH520 18 COG4864 COG4864, Uncharacterized protein conserved in bacteria Function unknown 51891361 Common - 2-oxoglutarate oxidoreductase beta subunit STH223 111 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 51891502 Common - permeases of drug/metabolite transporter superfamily STH364 108 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 51893480 Common - D-allose transporter subunit STH2342 121 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 51891300 Common - putative hydrolase STH162 32 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51894117 Nonpathogen - hypothetical protein, glutamate-rich STH2981 1 None None None 51891907 Common - transposase STH769 54 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892681 Common cheX1 chemotaxis protein STH1543 28 COG1406 COG1406, Predicted inhibitor of MCP methylation, homolog of CheC Cell motility and secretion 51892631 Common - uridylate kinase STH1493 226 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 51893116 Nonpathogen - hypothetical protein STH1978 1 None None None 51893335 Common - putative S-layer associated protein STH2197 71 None None None 51891271 Common - potassium channel TrkA variant STH133 10 COG0490 COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels Inorganic ion transport and metabolism 51893162 Nonpathogen - hypothetical protein STH2024 2 None None None 51893616 Common - PhoU-family transcriptional regulator STH2478 196 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 51891281 Nonpathogen - hypothetical protein STH143 5 None None None 51894156 Nonpathogen - hypothetical protein STH3020 1 None None None 51893014 Common - acyl-CoA thioester hydrolase STH1876 137 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 51894412 Common - ABC transporter ATP-binding protein STH3278 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51893677 Common - gamma-glutamyl phosphate reductase STH2539 189 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 51894296 Common - hypothetical protein STH3161 52 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 51893570 Common - putative beta-lactamase STH2432 52 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51892666 Common - 30S ribosomal protein S15 STH1528 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 51892461 Nonpathogen - hypothetical protein STH1323 1 None None None 51891769 Common - methyl-accepting chemotaxis protein STH631 132 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51893810 Nonpathogen - hypothetical protein STH2672 1 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 51892230 Common - 50S ribosomal protein L35 STH1092 15 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 51892237 Nonpathogen - hypothetical protein STH1099 2 None None None 51891566 Nonpathogen - hypothetical protein STH428 1 None None None 51893837 Common - transposase STH2699 85 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893896 Nonpathogen - hypothetical protein STH2758 1 None None None 51892800 Nonpathogen - hypothetical protein, glutamate-rich STH1662 1 None None None 51891676 Common - putative esterase STH538 77 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51892987 Common - transcription termination factor STH1849 197 COG0781 NusB, Transcription termination factor Transcription 51893709 Common - putative enoyl-(acyl-carrier-protein) reductase STH2571 140 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 51891577 Common tnaA tryptophanase STH439 44 COG3033 TnaA, Tryptophanase Amino acid transport and metabolism 51893553 Common - UDP-glucose:sterol glucosyltransferase STH2415 33 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 51892172 Common - elongation factor family GTP-binding protein STH1034 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 51893425 Common - IS21 family transposase STH2287 104 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51893696 Common thrS threonyl-tRNA synthetase STH2558 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51894131 Common flgE flagellar hook protein STH2995 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 51891987 Common - formamidopyrimidine-DNA glycosidase STH849 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 51891585 Common - hypothetical protein STH447 8 None None None 51891543 Common - hypothetical protein STH405 18 COG3439 COG3439, Uncharacterized conserved protein Function unknown 51894066 Common - hypothetical protein STH2930 7 COG4848 COG4848, Uncharacterized protein conserved in bacteria Function unknown 51892319 Common - spore coat protein STH1181 3 None None None 51891980 Nonpathogen - hypothetical protein STH842 1 None None None 51891478 Common smpB SsrA-binding protein STH340 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 51891570 Common obgE GTPase ObgE STH432 249 COG0536 Obg, Predicted GTPase General function prediction only 51893262 Common - hypothetical protein STH2124 5 None None None 51893500 Common - cystathionine beta-lyase STH2362 100 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 51894442 Common - two-component response regulator STH3308 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51892035 Common - Na+-transporting NADH-quinone reductase subunit 2 STH897 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 51891661 Common - multidrug efflux protein STH523 29 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51894204 Common rpsC 30S ribosomal protein S3 STH3069 241 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 51894116 Common flgK flagellar hook-associated protein STH2980 120 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 51892263 Nonpathogen - hypothetical protein STH1125 1 None None None 51891785 Common - ABC transporter permease protein STH647 124 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 51891860 Common - succinate-semialdehyde dehydrogenase STH722 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51892028 Common - multidrug efflux protein STH890 214 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51894226 Common - transcriptional antiterminator STH3091 215 COG0250 NusG, Transcription antiterminator Transcription 51892274 Nonpathogen - transposase-like protein STH1136 1 None None None 51893865 Common - hypothetical protein STH2727 2 None None None 51892065 Common - hypothetical protein STH927 54 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 51894102 Common - methyl-accepting chemotaxis protein STH2966 107 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51891999 Nonpathogen - hypothetical protein STH861 1 None None None 51891485 Common - hypothetical protein STH347 12 None None None 51892500 Common - glycosyl transferase STH1362 218 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51893970 Common hisI histidine biosynthesis bifunctional protein STH2832 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 51893757 Nonpathogen - hypothetical protein STH2619 1 None None None 51891272 Common - Na+/H+ antiporter STH134 19 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51891649 Nonpathogen - hypothetical protein STH511 1 None None None 51892284 Common - ABC transporter substrate-binding protein STH1146 102 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 51893054 Nonpathogen - hypothetical protein STH1916 1 None None None 51893196 Common - hypothetical protein STH2058 102 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 51891396 Nonpathogen - methionine synthase I, cobalamin-binding domain STH258 7 None None None 51893995 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase STH2857 156 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 51891668 Common - hypothetical protein STH530 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 51893856 Nonpathogen - hypothetical protein STH2718 1 None None None 51894063 Common - enoyl-(acyl-carrier protein) reductase STH2927 234 COG0623 FabI, Enoyl- acyl-carrier-protein 51892438 Common - transposase-like protein STH1300 44 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893901 Nonpathogen - hypothetical protein STH2763 1 None None None 51891806 Common - hypothetical protein STH668 37 None None None 51891323 Nonpathogen - histidinol phosphatase and related hydrolase of PHP family STH185 3 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 51891780 Common - cytochrome D ubiquinol oxidase subunit I STH642 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 51892935 Common - ATP-dependent DNA ligase STH1797 109 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 51891322 Nonpathogen - hypothetical protein STH184 1 None None None 51891718 Common - putative anthranilate synthase component I STH580 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 51892629 Common rpsB 30S ribosomal protein S2 STH1491 243 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 51892132 Nonpathogen - hypothetical protein STH994 1 None None None 51892747 Common - hypothetical protein STH1609 4 COG3339 COG3339, Uncharacterized conserved protein Function unknown 51894158 Common - ABC transporter permease protein STH3022 80 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 51891688 Common - putative oxidoreductase STH550 98 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 51891568 Common - hypothetical protein STH430 14 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 51891749 Common - ATP-dependent DNA helicase STH611 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51891381 Nonpathogen - hypothetical protein STH243 1 None None None 51892984 Common - exodeoxyribonuclease VII large subunit STH1846 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 51892074 Nonpathogen - hypothetical protein STH936 1 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 51894044 Common - hypothetical protein STH2908 4 None None None 51892370 Common - putative Sec-independent protein translocase STH1232 4 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 51891444 Nonpathogen - transposase-like protein STH306 1 None None None 51891383 Common - hypothetical protein STH245 73 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 51891169 Common - sigma-54-dependent transcriptional regulator variant STH31 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51893646 Common - putative potassium channel beta subunit STH2508 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 51891923 Common - UDP-glucose dehydrogenase STH785 202 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 51893642 Nonpathogen - hypothetical protein STH2504 1 COG4449 COG4449, Predicted protease of the Abi (CAAX) family General function prediction only 51892087 Common - sugar fermentation stimulation protein STH949 109 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 51892026 Common - ABC-transporter ATP-binding protein STH888 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893121 Common - mannnose-6 phospate isomerase STH1983 51 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 51891624 Common - argininosuccinate lyase STH486 231 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 51893030 Common - acetoin dehydrogenase STH1892 126 COG0517 COG0517, FOG: CBS domain General function prediction only 51892586 Common - 3-oxoacyl-(acyl carrier protein) synthase III STH1448 204 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 51892386 Common agaC PTS system N-acetylgalactosamine-specific IIC component STH1248 39 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 51892933 Common - hypothetical protein STH1795 66 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 51891787 Common - two-component response regulator STH649 221 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 161899038 Common - tryptophan synthase subunit beta STH1414 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 51892553 Common - tryptophan synthase alpha subunit STH1415 219 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 51893390 Nonpathogen - hypothetical protein STH2252 1 None None None 51893741 Nonpathogen - hypothetical protein STH2603 1 None None None 51893539 Common - recombination factor protein RarA STH2401 242 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 51893094 Common - ABC transporter permease protein STH1956 187 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893052 Common - transcriptional regulator STH1914 92 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 51893801 Nonpathogen - hypothetical protein STH2663 1 None None None 51893723 Common - acetate kinase STH2585 162 COG0282 ackA, Acetate kinase Energy production and conversion 51893076 Common - hypothetical protein STH1938 14 None None None 51892514 Common - hypothetical protein STH1376 49 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51894466 Common - ParBc, ParB-like nuclease domain STH3332 187 COG1475 Spo0J, Predicted transcriptional regulators Transcription 51893128 Common - short chain dehydrogenase STH1990 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51892528 Common - hypothetical protein STH1390 141 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 51894345 Common - hypothetical protein STH3210 18 None None None 51894379 Common - purine operon repressor STH3244 41 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 51891143 Nonpathogen - hypothetical protein STH5 8 None None None 51893206 Common - translation initiation factor IF-2B subunit alpha STH2068 130 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 51894278 Nonpathogen - hypothetical protein STH3143 1 None None None 51892164 Common - putative DNA-methyltransferase STH1026 139 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 51894221 Common rplL 50S ribosomal protein L7/L12 STH3086 208 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 51892377 Common - oligopeptide ABC transporter substrate-binding protein STH1239 204 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51892422 Common - iron ABC transporter permease protein STH1284 186 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 51891958 Nonpathogen - hypothetical protein STH820 4 None None None 51892768 Nonpathogen - hypothetical protein STH1630 1 None None None 51892224 Common - pyrroline-5-carboxylate reductase STH1086 213 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 51892923 Common - hypothetical protein STH1785 100 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51891241 Common spoIIID stage III sporulation protein D STH103 15 None None None 51891644 Nonpathogen - hypothetical protein STH506 1 None None None 51891863 Common - acetyl-CoA acetyltransferase STH725 175 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 51891882 Common - group II intron-encoding maturase STH744 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893175 Common - nitrogen fixation protein STH2037 148 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 51893485 Common - hypothetical protein STH2347 16 None None None 51892953 Common - D-alanyl-D-alanine carboxypeptidase STH1815 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51891934 Common - PTS system fructose-specific IIBC component STH796 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 51892184 Common - uridine kinase STH1046 94 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 51892431 Common - hypothetical protein STH1293 21 COG1700 COG1700, Uncharacterized conserved protein Function unknown 51891224 Nonpathogen - ATP synthase C subunit STH86 1 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 51894244 Common - hypothetical protein STH3109 47 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 51891629 Common - amino acid ABC transporter ATP-binding protein STH491 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51891742 Common murQ N-acetylmuramic acid-6-phosphate etherase STH604 88 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 51892831 Nonpathogen - hypothetical protein STH1693 1 None None None 51891830 Common - UDP-N-acetylpyruvoylglucosamine reductase STH692 186 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 51892675 Common cheA two-component sensor histidine kinase involved in chemotaxis, CheA STH1537 160 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 51892854 Common - phosphatidylserine synthase STH1716 152 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 51892298 Common ruvA Holliday junction DNA helicase RuvA STH1160 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 51891309 Common uvrC excinuclease ABC subunit C STH171 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 51891735 Common - hypothetical protein STH597 29 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 51893383 Nonpathogen - transposase-like protein STH2245 1 None None None 51894454 Common - single-strand DNA-binding protein STH3320 216 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 51891838 Common - putative low temperature requirement C protein STH700 13 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 51894301 Common - gamma-glutamyltranspeptidase STH3166 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 51892242 Nonpathogen - hypothetical protein STH1104 1 None None None 51891452 Nonpathogen - hypothetical protein STH314 1 None None None 51891459 Common - ribonucleoside-diphosphate reductase beta subunit STH321 157 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 51894004 Common - glycine reductase complex selenoprotein B STH2867 12 None None None 51891178 Common - CTP synthetase STH40 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 51891558 Nonpathogen - hypothetical protein STH420 2 None None None 51894355 Common - two-component response regulator STH3220 210 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51893064 Common - cobalamin-5-phosphate synthase STH1926 17 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 51892885 Common - tRNA isopentenylpyrophosphate transferase STH1747 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 51894026 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein STH2890 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 51894150 Common - electron transfer flavoprotein beta subunit STH3014 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 51891472 Common - DNA modification methylase M.SthI STH334 136 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 51892751 Common - spermidine synthase STH1613 127 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 51891655 Common - molybdopterin biosynthesis protein STH517 75 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51893161 Common - peptide-chain-release factor 3 STH2023 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 51893680 Common - type I citrate synthase STH2542 190 COG0372 GltA, Citrate synthase Energy production and conversion 51892195 Nonpathogen - hypothetical protein STH1057 1 None None None 51891553 Common - two-component response regulator STH415 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51891186 Nonpathogen - hypothetical protein STH48 6 None None None 51892108 Nonpathogen - hypothetical protein STH970 1 None None None 51893947 Nonpathogen - hypothetical protein STH2809 1 None None None 51891509 Common radC DNA repair protein STH371 177 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 51891801 Common - hypothetical protein STH663 59 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 51891438 Common - putative beta-N-acetylglucosaminidase STH300 181 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 51894163 Common - serine proteinase inhibitor STH3027 29 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 51892120 Common - hypothetical protein STH982 38 COG0730 COG0730, Predicted permeases General function prediction only 51893230 Common - hypothetical protein STH2092 23 COG2322 COG2322, Predicted membrane protein Function unknown 51891500 Common - GTP-binding protein STH362 175 COG0218 COG0218, Predicted GTPase General function prediction only 51893102 Nonpathogen - hypothetical protein STH1964 1 None None None 51894390 Common - putative signal peptidase II STH3255 58 COG1774 COG1774, Uncharacterized homolog of PSP1 Function unknown 51891887 Common - two-component sensor kinase, probably involved in phosphate sensing STH749 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51893822 Common - acetolactate synthase large subunit STH2684 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 51893701 Common - hypothetical protein STH2563 15 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 51891810 Nonpathogen - hypothetical protein STH672 1 None None None 51891315 Common - hypothetical protein STH177 61 COG1950 COG1950, Predicted membrane protein Function unknown 51891422 Nonpathogen - transposase-like protein STH284 1 None None None 51893069 Common - hypothetical protein STH1931 10 None None None 51893576 Common - adenine phosphoribosyltransferase STH2438 189 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 51893938 Common - hypothetical protein STH2800 7 None None None 51891429 Common - hypothetical protein STH291 41 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 51891819 Common - arsenic transporting ATPase STH681 84 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 51892687 Common - dihydrodipicolinate synthase STH1549 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 51892570 Common - small acid-soluble spore protein STH1432 14 None None None 51893950 Common - exodeoxyribonuclease-like protein STH2812 141 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 51892623 Common - putative flagellar protein STH1485 24 COG1582 FlgEa, Uncharacterized protein, possibly involved in motility Cell motility and secretion 51892874 Common lexA LexA repressor STH1736 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 51892444 Common - putative DNA helicase STH1306 26 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 51893304 Common - putative 2-hydroxyacid dehydrogenase STH2166 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 51893243 Common gerKB2 spore germination protein KB STH2105 12 None None None 51892548 Common - hypothetical protein STH1410 97 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 51892718 Common - hypothetical protein STH1580 35 None None None 51892763 Common - putative zinc/cadmium-transporting ATPase STH1625 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 51892473 Common - cation-transporting ATPase STH1335 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 51891260 Common - flagellar assembly protein FliW STH122 32 COG1699 COG1699, Uncharacterized protein conserved in bacteria Function unknown 51892783 Common - glyceraldehyde-3-phosphate dehydrogenase STH1645 226 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 51891938 Common - branched-chain amino acid ABC transporter ATP-binding protein STH800 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51893836 Common - IS21 family transposase STH2698 105 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51891401 Nonpathogen - hypothetical protein STH263 1 None None None 51893211 Nonpathogen - hypothetical protein STH2073 1 None None None 51892603 Common - signal recognition particle STH1465 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 51891151 Common - DNA polymerase III gamma and tau subunits STH13 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 51892577 Common - phosphopantetheine adenylyltransferase STH1439 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 51893602 Common - hypothetical protein STH2464 99 COG1703 ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family Amino acid transport and metabolism 51893525 Common - hypothetical protein STH2387 10 None None None 51892308 Common spoVR stage V sporulation protein R STH1170 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 51892256 Common - phosphomannomutase STH1118 239 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 51893698 Common - putative acetyltransferase STH2560 66 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51891852 Common - hypothetical protein STH714 17 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 51893691 Common moxR1 methanol dehydrogenase regulatory protein STH2553 191 COG0714 COG0714, MoxR-like ATPases General function prediction only 51891252 Common - pyruvate formate lyase activating enzyme STH114 101 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 51894389 Common - tetrapyrrole methylase family protein STH3254 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 51893231 Common - putative heme O synthase STH2093 178 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 51891239 Common - stage II sporulation protein D STH101 45 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 51894259 Common - hypothetical protein STH3124 43 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 51893225 Common - sigma-54-dependent transcriptional regulator STH2087 213 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51892863 Nonpathogen - hypothetical protein STH1725 4 None None None 51891518 Nonpathogen - hypothetical protein STH380 1 None None None 51892617 Common - putative peptidase STH1479 98 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 51893530 Common - soprulation specific penicillin-binding protein STH2392 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51892305 Nonpathogen - putative acetyltransferase STH1167 4 COG0456 RimI, Acetyltransferases General function prediction only 51892201 Common - NAD(P)H nitroreductase STH1063 99 COG0778 NfnB, Nitroreductase Energy production and conversion 51893786 Common - hypothetical protein STH2648 28 COG2707 COG2707, Predicted membrane protein Function unknown 51893668 Nonpathogen - hypothetical protein STH2530 1 None None None 51892810 Common - DNA topoisomerase III STH1672 246 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 51891633 Nonpathogen - hypothetical protein STH495 1 None None None 51891680 Common - hypothetical protein STH542 74 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 51891919 Common - UDP-glucose 4-epimerase STH781 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892601 Common - hypothetical protein STH1463 26 COG1694 MazG, Predicted pyrophosphatase General function prediction only 51892892 Common - group II intron-encoding maturase variant STH1754 39 None None None 51893154 Common - ABC transporter ATP-binding protein STH2016 247 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51893881 Common - oligopeptide ABC transporter permease protein STH2743 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894173 Common - hypothetical protein STH3037 116 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51893620 Nonpathogen - hypothetical protein STH2482 1 COG2319 COG2319, FOG: WD40 repeat General function prediction only 51891793 Common - hypothetical protein STH655 27 COG2014 COG2014, Uncharacterized conserved protein Function unknown 51893666 Common - RNA polymerase ECF-type sigma factor STH2528 134 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51894210 Common rplC 50S ribosomal protein L3 STH3075 248 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 51891206 Common - putative peptidase STH68 194 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51892005 Common - hypothetical protein STH867 78 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 51892310 Common - serine protein kinase STH1172 74 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 51891319 Common - RNA polymerase ECF-type sigma factor STH181 168 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51893086 Common - 3-dehydroquinate synthase STH1948 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 51891479 Common - MarR family transcriptional regulator STH341 115 COG1846 MarR, Transcriptional regulators Transcription 51893954 Common - putative 5-formyltetrahydrofolate cyclo-ligase STH2816 21 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 51893082 Nonpathogen - hypothetical protein STH1944 1 None None None 51891762 Common - hypothetical protein STH624 90 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 51891538 Nonpathogen - hypothetical protein STH400 1 None None None 51893321 Nonpathogen - hypothetical protein STH2183 1 None None None 51892466 Nonpathogen - hypothetical protein STH1328 1 None None None 51891419 Nonpathogen - hypothetical protein STH281 1 None None None 51893521 Nonpathogen - hypothetical protein STH2383 1 None None None 51891776 Common - nitroreductase STH638 100 COG0778 NfnB, Nitroreductase Energy production and conversion 51892692 Nonpathogen - hypothetical protein STH1554 1 None None None 51893065 Common - cobalamin biosynthesis protein STH1927 147 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 51894289 Nonpathogen - hypothetical protein STH3154 1 None None None 51892649 Common - magnesium transporter STH1511 119 COG1285 SapB, Uncharacterized membrane protein Function unknown 51893354 Nonpathogen - transposase-like protein STH2216 1 None None None 51893939 Nonpathogen - hypothetical protein STH2801 4 None None None 51892702 Common - putative 4-hydroxybenzoate decarboxylase STH1564 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 51891504 Common valS valyl-tRNA synthetase STH366 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51891758 Common - hypothetical protein STH620 23 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 51893969 Common hisC histidinol-phosphate aminotransferase STH2831 238 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 51894186 Common rpmJ ribosomal protein L36 STH3051 136 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 51894435 Common - putative serine/threonine protein phosphatase STH3301 137 None None None 51894456 Common - hypothetical protein STH3322 27 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 51891222 Nonpathogen - hypothetical protein STH84 1 None None None 51891871 Common - hypothetical protein STH733 11 COG0457 NrfG, FOG: TPR repeat General function prediction only 51892997 Common spoIIIAD stage III sporulation protein AD STH1859 15 None None None 51892822 Common spoIVA stage IV sporulation protein A STH1684 15 None None None 51893453 Common - dipeptide ABC transporter substrate-binding protein STH2315 217 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51892534 Nonpathogen - hypothetical protein STH1396 1 None None None 51892140 Common - 5'-nucleotidase STH1002 139 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 51893419 Common - 50S ribosomal protein L25/general stress protein Ctc STH2281 171 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 51892125 Common - two-component response regulator STH987 214 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 51893603 Common - methylmalonyl-CoA mutase C-terminal domain STH2465 115 COG2185 Sbm, Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) Lipid metabolism 51894035 Common - DNA-dependent DNA polymerase family X STH2899 77 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 51892416 Common - PTS system mannose-specific IID component STH1278 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 51893364 Common - hypothetical protein STH2226 8 None None None 51892544 Common - multidrug efflux protein STH1406 29 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 51892159 Common - hypothetical protein STH1021 112 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 51893755 Common - aminoglycoside 6'-N-acetyltransferase STH2617 33 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51892905 Common - LysR family transcriptional regulator STH1767 193 COG0583 LysR, Transcriptional regulator Transcription 51891673 Common - NADH-dependent butanol dehydrogenase STH535 171 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 51892320 Nonpathogen - spore coat-associated protein STH1182 1 None None None 51893475 Common - ribose-5-phosphate isomerase B STH2337 129 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 51892215 Nonpathogen - hypothetical protein STH1077 1 None None None 51891398 Nonpathogen - putative cation transporter STH260 11 COG4756 COG4756, Predicted cation transporter General function prediction only 51893358 Nonpathogen - hypothetical protein STH2220 2 None None None 51891917 Common - putative lipopolysaccharide N-acetylglucosaminyltransferase STH779 179 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51892529 Common mscL large-conductance mechanosensitive channel STH1391 135 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51893134 Common - hypothetical protein STH1996 183 COG0517 COG0517, FOG: CBS domain General function prediction only 51892411 Common - xylulose kinase STH1273 181 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 51893754 Common - putative copper-transporting ATPase STH2616 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 51892738 Common - putative transcriptional regulator STH1600 51 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 51893845 Common - putative glycosyl transferase STH2707 226 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51892177 Common - pyrimidine nucleoside phosphorylase STH1039 142 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 51893089 Common - type IV prepilin-like leader peptide processing enzyme STH1951 28 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51892569 Common - small acid-soluble spore protein STH1431 15 None None None 51893024 Common - hypothetical protein, glycine-rich STH1886 2 None None None 51892375 Common - hypothetical protein STH1237 113 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 51891531 Nonpathogen - hypothetical protein STH393 1 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 51893844 Common - transposase STH2706 45 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893504 Common mutT mutator MutT protein STH2366 31 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893248 Common - hypothetical protein STH2110 54 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 51894177 Common rplM 50S ribosomal protein L13 STH3041 240 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 51893779 Common - fumarate hydratase STH2641 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 51893566 Common - putative Zn-dependent hydrolase STH2428 222 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 51893090 Common - shikimate 5-dehydrogenase STH1952 223 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 51891495 Common tig trigger factor STH357 214 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 51892593 Common - putative chromosome segregation SMC protein STH1455 191 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51892069 Nonpathogen - hypothetical protein STH931 1 None None None 51891192 Common - putative transposase STH54 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893558 Common - putative acetyltransferase STH2420 58 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51891703 Common - deoxyribose-phosphate aldolase STH565 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 51892753 Common - branched-chain amino acid ABC transporter permease protein STH1615 150 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51893381 Nonpathogen - hypothetical protein STH2243 9 None None None 51891354 Common - hypothetical protein STH216 27 None None None 51894074 Common - holo-(acyl-carrier-protein) synthase STH2938 53 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 51893551 Common - hypothetical protein STH2413 23 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51893929 Nonpathogen - hypothetical protein STH2791 5 None None None 51894475 Nonpathogen - 50S ribosomal protein L34 STH3341 1 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 51892343 Common - soprulation-specific penicillin-binding protein STH1205 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51892852 Common - stationary phase survival protein STH1714 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 51892890 Common - small heat shock protein STH1752 147 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 51892037 Common - SoxR-reducing system protein RsxE STH899 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 51892912 Common - leucyl aminopeptidase STH1774 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 51893375 Common - group II intron-encoding maturase variant STH2237 84 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51894326 Common - imidazolonepropionase STH3191 114 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 51894261 Common - hypothetical protein STH3126 9 None None None 51892734 Common nuoK1 NADH dehydrogenase I subunit K STH1596 163 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 51893982 Common - hypothetical protein STH2844 21 COG4496 COG4496, Uncharacterized protein conserved in bacteria Function unknown 51891879 Common - major anaerobically induced outer membrane protein STH741 99 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 51893739 Common - formate dehydrogenase alpha subunit STH2601 176 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51892408 Common - hypothetical protein STH1270 196 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 51894337 Common - molybdopterin-guanine dinucleotide biosynthesis protein B STH3202 100 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 51894399 Common - hypothetical protein STH3265 14 None None None 51894240 Nonpathogen - hypothetical protein, glycine-rich STH3105 1 None None None 51891582 Common leuS leucyl-tRNA synthetase STH444 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51891575 Common - penicillin-binding protein STH437 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 51891299 Common - hypothetical protein STH161 88 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 51894138 Common fliG flagellar motor switch protein G STH3002 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 51894472 Common spoIIIJ SpoIIIJ STH3338 211 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 51891371 Nonpathogen - hypothetical protein STH233 1 None None None 51893863 Common - hypothetical protein STH2725 16 COG3601 COG3601, Predicted membrane protein Function unknown 51894188 Common - Ribosomal protein L14E STH3053 9 COG2163 RPL14A, Ribosomal protein L14E/L6E/L27E Translation, ribosomal structure and biogenesis 51892094 Common - acylaminoacyl-peptidase STH956 188 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51894215 Common rpsL 30S ribosomal protein S12 STH3080 231 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 51891524 Nonpathogen - hypothetical protein STH386 1 None None None 51892063 Common - hypothetical protein STH925 15 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 51891767 Common - hypothetical protein STH629 5 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 51892970 Common spo0A1 stage 0 sporulation protein A, two-component response regualtor STH1832 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51893432 Common - 50S ribosomal protein L25/general stress protein Ctc STH2294 170 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 51892219 Common - endo-1,4-beta-glucanase STH1081 72 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 51893110 Common spoIIIE stage III sporulation protein E STH1972 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 51893150 Common - putative multidrug efflux protein STH2012 163 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51893867 Common - two-component sensor histidine kinase STH2729 141 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51891378 Common - hypothetical protein STH240 7 None None None 51891823 Nonpathogen - hypothetical protein STH685 1 None None None 51893439 Common - gluconate permease STH2301 79 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 51892562 Common - oligopeptide ABC transporter permease protein STH1424 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894440 Nonpathogen - hypothetical protein STH3306 2 COG4863 COG4863, Uncharacterized protein conserved in bacteria Function unknown 51892791 Common - ABC transporter substrate-binding protein STH1653 39 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51892270 Common - IstB helper protein C-terminal domain STH1132 86 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51894109 Common motA flagellar motor protein MotA STH2973 114 COG1291 MotA, Flagellar motor component Cell motility and secretion 51892588 Common - malonyl CoA-acyl carrier protein transacylase STH1450 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 51893427 Common - transposase STH2289 89 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893839 Common - transposase subunit STH2701 81 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893313 Common sbcC DNA repair exonuclease STH2175 113 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 51894421 Common - hypothetical protein STH3287 19 None None None 51893585 Common - hypothetical protein STH2447 22 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 51891548 Common - ArsR family transcriptional regulator STH410 144 COG0640 ArsR, Predicted transcriptional regulators Transcription 51892261 Common - hypothetical protein STH1123 14 None None None 51893854 Common - sugar transferase involved in lipopolysaccharide synthesis STH2716 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 51893447 Common - putative PTS system, IIB component STH2309 12 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 51891412 Common - IS21 family transposase STH274 107 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51893274 Nonpathogen - hypothetical protein STH2136 1 None None None 51892244 Common pheSB phenylalanyl-tRNA synthetase beta subunit STH1106 228 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 51894341 Common - hypothetical protein STH3206 44 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 51891728 Common - isocitrate lyase STH590 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 51891329 Common - redox-sensing transcriptional repressor Rex STH191 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 51891487 Common - PTS system enzyme IIABC component STH349 18 COG1264 PtsG, Phosphotransferase system IIB components Carbohydrate transport and metabolism 51892272 Nonpathogen - hypothetical protein STH1134 1 None None None 51892351 Common - acetamidase/formamidase STH1213 64 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 51891985 Common - group II intron-encoding maturase STH847 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51892214 Common - hypothetical protein STH1076 113 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51894007 Common - thioredoxin STH2871 226 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 51893097 Common - hypothetical protein STH1959 2 None None None 51892058 Common - two-component sensor histidine kinase STH920 154 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51894202 Common rpmC 50S ribosomal protein L29 STH3067 176 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 51893908 Common nuoK2 NADH dehydrogenase I subunit K STH2770 144 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 51891666 Common - hypothetical protein STH528 13 None None None 51893045 Nonpathogen - hypothetical protein STH1907 1 None None None 51892286 Common - N-acyl-L-amino acid amidohydrolase STH1148 172 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 51892170 Common - DinP-like DNA-damage-inducible protein STH1032 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 51892742 Common - ferrichrome ABC transporter substrate-binding protein STH1604 85 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 51891968 Common - hypothetical protein STH830 9 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 51893361 Common - hypothetical protein STH2223 12 None None None 51893651 Common - putative thioredoxin reductase STH2513 25 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51892667 Common - RNA polymerase ECF-type sigma factor STH1529 131 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51891992 Nonpathogen - hypothetical protein STH854 1 None None None 51893333 Common - branched-chain amino acid ABC transporter permease protein STH2195 151 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51893915 Common nuoB2 NADH dehydrogenase I subunit B STH2777 190 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 51891541 Nonpathogen - hypothetical protein, glutamate-rich STH403 1 None None None 51893463 Common - metal-dependent hydrolase STH2325 47 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 51894094 Common - spore cortex-lytic enzyme precursor STH2958 55 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 51892207 Nonpathogen - hypothetical protein STH1069 1 None None None 51892277 Nonpathogen - multidrug efflux protein variant STH1139 3 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 51893295 Common - cobalt ABC transporter permease protein STH2157 43 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 51891693 Nonpathogen - putative amidase STH555 2 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 51892807 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase STH1669 135 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 51892139 Common - cation efflux system protein STH1001 179 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 51893923 Common - hypothetical protein STH2785 8 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51893282 Common - hypothetical protein STH2144 124 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 51893164 Common - hypothetical protein STH2026 175 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893768 Common - glycine betaine/carnitine/choline ABC transporter ATP-binding protein STH2630 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 51893410 Nonpathogen - hypothetical protein, serine-rich STH2272 1 None None None 51894409 Common - putative membrane efflux protein STH3275 173 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 51891942 Common - acetyl-CoA acetyltransferase STH804 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 51892018 Common - group II intron-encoding maturase STH880 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51892660 Common infB translation initiation factor IF-2 STH1522 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 51893440 Common - hypothetical protein STH2302 101 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 51892796 Common - Na+/H+ antiporter subunit STH1658 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 51892993 Common spoIIIAH stage III sporulation protein AH STH1855 12 None None None 51893815 Common - RNA polymerase ECF-type sigma factor STH2677 173 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51894143 Common flgG flagellar basal body and hook proteins STH3007 125 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 51892051 Common - peptidase STH913 198 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 51894087 Common - putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase STH2951 181 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 51893072 Common - iron ABC transporter permease protein STH1934 186 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 51892637 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase STH1499 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 51891561 Common - putative Fe-S oxidoreductase STH423 65 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51893378 Nonpathogen - hypothetical protein STH2240 1 None None None 51891954 Common - translation initiation factor eIF-2B alpha subunit STH816 129 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 51891857 Common - hypothetical protein STH719 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 51893294 Common - hypothetical protein STH2156 18 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 51892510 Common - putative oxidoreductase STH1372 23 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892992 Nonpathogen - hypothetical protein STH1854 1 None None None 51893267 Nonpathogen - hypothetical protein STH2129 1 None None None 51893005 Common - hypothetical protein STH1867 7 None None None 51892453 Common - glycosylase STH1315 36 COG2152 COG2152, Predicted glycosylase Carbohydrate transport and metabolism 51892011 Common - sulfate ABC transporter substrate-binding protein STH873 62 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51892829 Common - cytochrome D ubiquinol oxidase subunit II STH1691 55 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 51891189 Common - transposase subunit STH51 76 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51894100 Common - cation efflux system protein STH2964 213 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 51892507 Common - UDP-glucose 4-epimerase STH1369 231 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892327 Common - acetyl-CoA carboxylase alpha subunit STH1189 212 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 51891909 Common - ribokinase STH771 104 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 51894195 Common rplF 50S ribosomal protein L6 STH3060 242 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 51891897 Common - ABC transporter ATP-binding protein STH759 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51891346 Common lysK lysyl-tRNA synthetase STH208 77 COG1384 LysS, Lysyl-tRNA synthetase (class I) Translation, ribosomal structure and biogenesis 51893879 Common - 1-pyrroline-5-carboxylate dehydrogenase STH2741 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51893675 Common - hypothetical protein STH2537 69 COG2030 MaoC, Acyl dehydratase Lipid metabolism 51894197 Common rpsN 30S ribosomal protein S14 STH3062 209 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 51893012 Common - putative methyl-accepting chemotaxis protein STH1874 31 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51893283 Common - hypothetical protein STH2145 124 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 51893941 Common - hypothetical protein STH2803 20 None None None 51891651 Common - putative protein kinase C inhibitor STH513 237 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 51893308 Common - hypothetical protein STH2170 5 None None None 51894097 Nonpathogen - hypothetical protein STH2961 1 None None None 51894400 Common - group II intron-encoding maturase STH3266 33 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 51893395 Common - hypothetical protein STH2257 23 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 51891287 Common - oligopeptide ABC transporter permease protein STH149 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894319 Common - putative transcriptional regulator similar to Bvg accessory factor STH3184 128 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 51892899 Common - bifunctional methionine sulfoxide reductase A/B protein STH1761 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 51894460 Common - hypothetical protein STH3326 75 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 51893590 Common gerXA spore germination protein KA STH2452 15 None None None 51891994 Common - ABC transporter ATP-binding protein STH856 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51891442 Common - N-acetyl-beta-hexosaminidase STH304 45 COG3525 Chb, N-acetyl-beta-hexosaminidase Carbohydrate transport and metabolism 51892420 Nonpathogen - hypothetical protein STH1282 1 None None None 51893627 Common - GntP family permease STH2489 80 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 51893397 Nonpathogen - hypothetical protein STH2259 5 None None None 51892436 Common - transposase-like protein STH1298 45 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892516 Nonpathogen - hypothetical protein STH1378 2 None None None 51892013 Common - ABC transporter permease protein STH875 143 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51891885 Common - phosphate ABC transporter permease protein STH747 224 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51892388 Common - conserved hypothetical protein related to PTS system STH1250 6 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 51891952 Common - methylthioadenosine phosphorylase STH814 111 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 51893269 Common - penicillin-binding protein STH2131 203 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51892379 Common - hypothetical protein STH1241 165 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 51892761 Common - ATP-dependent RNA helicase STH1623 186 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 51893813 Common - endo-1,4-beta-glucanase STH2675 87 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 51892162 Nonpathogen - hypothetical protein STH1024 1 None None None 51893851 Common - UTP-glucose-1-phosphate uridylyltransferase STH2713 234 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 51893790 Common - oligopeptide ABC transporter substrate-binding protein STH2652 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51891440 Common - putative beta-lactamase STH302 150 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 51894343 Common - iron hydrogenase beta subunit STH3208 177 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 51891865 Common - hypothetical protein STH727 187 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 51894349 Common - two-component response regulator STH3214 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51892296 Common - putative transcriptional regulator STH1158 63 COG1316 LytR, Transcriptional regulator Transcription 51892021 Common - hypothetical protein STH883 75 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 51893245 Nonpathogen - hypothetical protein STH2107 11 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 51892485 Nonpathogen - hypothetical protein STH1347 1 None None None 51893204 Common - efflux transporter STH2066 227 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51891344 Nonpathogen - hypothetical protein STH206 1 None None None 51892381 Common - 23S rRNA pseudouridine synthase STH1243 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 51893495 Common - acyl-CoA dehydrogenase, short-chain specific STH2357 146 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 51894175 Common - N-acetylmuramoyl-L-alanine amidase STH3039 181 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 51892334 Common - glutamate/leucine dehydrogenase STH1196 180 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 51892887 Nonpathogen - hypothetical protein STH1749 1 None None None 51892182 Nonpathogen - hypothetical protein STH1044 1 None None None 51892833 Common - hypothetical protein STH1695 7 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 51893177 Common - biphenyl dioxygenase STH2039 71 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 51893003 Common - Xaa-Pro dipeptidase STH1865 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 51894312 Nonpathogen - hypothetical protein STH3177 1 None None None 51891770 Common - ABC transporter ATP-binding protein STH632 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51894208 Common rplW 50S ribosomal protein L23 STH3073 202 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 51892258 Common - putative mannose-1-phosphate guanyltransferase STH1120 236 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 51893400 Nonpathogen - putative DNA methylase STH2262 1 None None None 51891266 Common - oligopeptide ABC transporter substrate-binding protein STH128 207 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51893515 Nonpathogen - hypothetical protein, glycine-rich STH2377 1 None None None 51892149 Common - hypothetical protein STH1011 37 COG1836 COG1836, Predicted membrane protein Function unknown 51892356 Common ftsA2 cell division protein FtsA STH1218 190 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 51894000 Common - phosphomethylpyrimidine kinase STH2862 216 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 51893875 Common - glycerophosphodiester phosphodiesterase STH2737 180 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 51891836 Common - hypothetical protein STH698 16 COG2353 COG2353, Uncharacterized conserved protein Function unknown 51892047 Nonpathogen - hypothetical protein STH909 1 None None None 51894350 Common - putative glycerate dehydrogenase STH3215 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 51894114 Nonpathogen flaG flagellin STH2978 1 COG1334 FlaG, Uncharacterized flagellar protein FlaG Cell motility and secretion 51893747 Common - ABC transporter ATP-binding protein STH2609 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 51892259 Common - penicillin-binding protein STH1121 203 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 51892955 Nonpathogen - hypothetical protein STH1817 1 None None None 51894353 Common - ABC transporter permease protein STH3218 206 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 51891363 Common spo0A2 stage 0 sporulation protein A, two-component response regualtor STH225 78 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51891176 Common - lysine 5,6-aminomutase beta subunit STH38 24 COG5012 COG5012, Predicted cobalamin binding protein General function prediction only 51891474 Common - site-specific recombinase STH336 100 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 51894061 Common - putative glycoprotein endopeptidase STH2925 133 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 51894242 Nonpathogen - hypothetical protein STH3107 10 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 51893445 Common - putative phosphoesterase STH2307 36 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 51891325 Common - hypothetical protein STH187 97 COG0391 COG0391, Uncharacterized conserved protein Function unknown 51891747 Common - putative lipase STH609 8 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 51891385 Common - thioredoxin STH247 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 51893078 Common - PTS system mannose/fructose-specific IIA component STH1940 100 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 51894235 Common - formate dehydrogenase beta subunit STH3100 175 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51891274 Common - peptide chain release factor 2 STH136 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 51893548 Nonpathogen - hypothetical protein STH2410 1 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51892189 Common - RNA polymerase ECF-type sigma factor STH1051 168 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51891332 Common - phosphoglucomutase STH194 239 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 51894258 Common - 4-diphosphocytidyl-2-methyl-D-erithritol synthase STH3123 195 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 51893640 Common - putative 5,10-methylenetetrahydrofolate reductase STH2502 144 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 51893099 Common - hypothetical protein STH1961 2 None None None 51893599 Nonpathogen - hypothetical protein, arginine-rich STH2461 1 None None None 51891167 Nonpathogen - transmembrane protein STH29 1 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 51893644 Common - two-component response regulator STH2506 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51893649 Nonpathogen - hypothetical protein, alanine-rich STH2511 1 None None None 51891682 Common - ferritin STH544 84 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 51892924 Common - spore maturation protein STH1786 39 COG0700 SpmB, Uncharacterized membrane protein Function unknown 51893706 Nonpathogen - hypothetical protein STH2568 1 None None None 51892358 Nonpathogen spoIIGA sporulation-specific protease STH1220 6 None None None 51891842 Common - hypothetical protein STH704 206 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 51894148 Common - 3-hydroxyacyl-CoA dehydrogenase STH3012 162 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 51892678 Common cheY two-component response regulator involved in modulation of flagellar, CheY STH1540 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51893272 Nonpathogen - hypothetical protein STH2134 1 None None None 51892395 Common - aspartate carbamoyltransferase STH1257 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 51892625 Common - hypothetical protein STH1487 37 COG1315 COG1315, Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain DNA replication, recombination, and repair 51892846 Nonpathogen - hypothetical protein STH1708 1 None None None 51892841 Common - putative N-ethylammeline chlorohydrolase STH1703 170 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 51891782 Common - sigma-54-dependent transcriptional regulator STH644 176 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51894005 Common - glycine/sarcosine/betaine reductase complex protein A STH2869 7 None None None 51891302 Common - hypothetical protein STH164 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 51891925 Common - BNR domain protein STH787 29 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 51893183 Common - esterase STH2045 77 COG1647 COG1647, Esterase/lipase General function prediction only 51893523 Common - hypothetical protein STH2385 140 COG0628 PerM, Predicted permease General function prediction only 51891209 Common rpmE ribosomal protein L31 STH71 116 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 51893541 Common - threonine aldolase STH2403 113 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 51893279 Common - alkaline phosphatase STH2141 166 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 51892130 Common - glycolate oxidase subunit STH992 174 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51893327 Common - TetR family transcriptional regulator STH2189 148 COG1309 AcrR, Transcriptional regulator Transcription 51893315 Nonpathogen - hypothetical protein STH2177 1 None None None 51891516 Nonpathogen - hypothetical protein STH378 3 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 51893721 Nonpathogen - hypothetical protein STH2583 7 None None None 51893092 Nonpathogen - hypothetical protein STH1954 1 None None None 51891327 Common - hypothetical protein STH189 53 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 51894272 Common - putative SAM-dependent methyltransferase STH3137 106 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 51893252 Nonpathogen - hypothetical protein STH2114 3 None None None 51892303 Common - S-adenosylmethionine:tRNA-ribosyltransferase- isomerase STH1165 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 51892555 Common - 3-deoxy-7-phosphoheptulonate synthase STH1417 186 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 51892619 Common - DNA topoisomerase I STH1481 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 51893975 Common hisD histidinol dehydrogenase STH2837 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 51893118 Common - group II intron-encoding maturase STH1980 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893829 Common - two-component response regulator variant STH2691 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51894012 Common - Fur family transcriptional regulator STH2876 160 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 51891391 Common - ABC transporter ATP-binding protein STH253 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 51893913 Common nuoC2 NADH dehydrogenase I subunit C STH2775 180 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 51893259 Common - transketolase STH2121 220 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 51891243 Common - hypothetical protein STH105 6 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 51892499 Common - hypothetical protein STH1361 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 51891406 Nonpathogen - hypothetical protein STH268 1 None None None 51892650 Common dnaE3 DNA polymerase III alpha subunit STH1512 220 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 51894134 Nonpathogen - hypothetical protein STH2998 1 COG3334 COG3334, Uncharacterized conserved protein Function unknown 51893532 Common - universal stress protein STH2394 77 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 51893633 Common - putative undecaprenol kinase STH2495 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 51893109 Common - ABC transporter permease protein STH1971 174 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51891213 Common - putative translation factor STH75 239 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 51892193 Common - hypothetical protein STH1055 7 None None None 51894294 Common - hypothetical protein STH3159 7 COG1647 COG1647, Esterase/lipase General function prediction only 51892613 Common - hypothetical protein STH1475 139 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 51894049 Common - acetyl-CoA acetyltransferase STH2913 174 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 51893159 Common - D-alanyl-D-alanine carboxypeptidase STH2021 153 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 51892302 Common spoIID sporulation protein SpoIID STH1164 48 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 51891465 Nonpathogen - transposase-like protein STH327 1 None None None 51892865 Common - A/G-specific adenine glycosylase STH1727 223 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 51891230 Common - ATP synthase epsilon subunit STH92 84 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 51893996 Nonpathogen - hypothetical protein STH2858 1 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 51892798 Common - Na+/H+ antiporter subunit STH1660 60 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 51893331 Common - ABC transporter ATP-binding protein STH2193 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51892765 Common - BlaI family transcriptional regulator STH1627 53 COG3682 COG3682, Predicted transcriptional regulator Transcription 51892232 Common - potassium uptake system protein STH1094 123 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 51892812 Common - isopentenyl pyrophosphate isomerase STH1674 80 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 51891880 Nonpathogen - hypothetical protein STH742 7 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 51891288 Common - geranylgeranylglyceryl phosphate synthase-like protein STH150 35 COG1646 COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold General function prediction only 51893344 Common - hypothetical protein STH2206 97 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 51893897 Nonpathogen - hypothetical protein STH2759 1 None None None 51894165 Nonpathogen - hypothetical protein STH3029 1 None None None 51894279 Nonpathogen - hypothetical protein STH3144 1 COG3258 COG3258, Cytochrome c Energy production and conversion 51893693 Common - hypothetical protein STH2555 109 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 51892704 Common - hypothetical protein STH1566 6 None None None 51892937 Common - hypothetical protein STH1799 15 COG3874 COG3874, Uncharacterized conserved protein Function unknown 51894397 Common - pyruvate ferredoxin oxidoreductase alpha-beta subunit STH3262 125 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51893199 Common - ethanolamine utilization protein STH2061 20 COG4810 EutS, Ethanolamine utilization protein Amino acid transport and metabolism 51892777 Nonpathogen - hypothetical protein, proline- and glutamine-rich STH1639 1 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 51893622 Common paaC phenylacetic acid degradation protein STH2484 44 COG3396 COG3396, Uncharacterized conserved protein Function unknown 51891237 Common - hypothetical protein STH99 90 COG0714 COG0714, MoxR-like ATPases General function prediction only 51891951 Nonpathogen - hypothetical protein STH813 1 None None None 51891678 Common - putative xenobiotic reductase STH540 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 51891184 Nonpathogen - hypothetical protein STH46 1 None None None 51893682 Common - isocitrate dehydrogenase STH2544 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 51894380 Common - hypothetical protein STH3245 30 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 51891778 Common - hypothetical protein STH640 26 COG1434 COG1434, Uncharacterized conserved protein Function unknown 51893513 Common - D-alanyl-D-alanine carboxypeptidase STH2375 156 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51892605 Common - hypothetical protein STH1467 19 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 51894152 Common - long-chain fatty-acid-CoA ligase STH3016 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51892749 Nonpathogen - hypothetical protein STH1611 1 None None None 51894058 Common rnhA ribonuclease H STH2922 175 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 51892092 Common - beta-glucosidase STH954 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 51891716 Common - hypothetical protein STH578 44 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51891903 Nonpathogen - hypothetical protein STH765 1 None None None 51891555 Common - serine proteinase STH417 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 51892076 Common - 3-hydroxyisobutyrate dehydrogenase STH938 197 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 51894308 Nonpathogen - hypothetical protein STH3173 1 None None None 51892699 Common spoIIIE stage III sporulation protein E STH1561 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 51893795 Nonpathogen - hypothetical protein STH2657 1 None None None 51891317 Common - MutT-like protein STH179 4 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51894217 Common - hypothetical protein STH3082 85 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 51892723 Common - D-alanyl-D-alanine carboxypeptidase STH1585 157 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51893306 Common - polysaccharide deacetylase STH2168 122 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51893228 Common - hypothetical protein STH2090 4 None None None 51892152 Common - acetolactate synthase-like TPP-requiring enzyme STH1014 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 51894224 Common rplA 50S ribosomal protein L1 STH3089 224 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 51891436 Common - oligopeptide ABC transporter permease protein STH298 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891162 Common - two-component sensor histidine kinase STH24 142 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51891812 Common - hypothetical protein STH674 6 COG3601 COG3601, Predicted membrane protein Function unknown 51893560 Common hisS1 histidyl-tRNA synthetase STH2422 248 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51894042 Common - molybdenum cofactor biosynthesis protein STH2906 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51891932 Common - fructose-1-phosphate kinase STH794 126 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 51894427 Common - iron hydrogenase STH3293 65 COG4624 COG4624, Iron only hydrogenase large subunit, C-terminal domain General function prediction only 51891936 Common - putative long-chain fatty-acid-CoA ligase STH798 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51892188 Common - hypothetical protein STH1050 105 COG1801 COG1801, Uncharacterized conserved protein Function unknown 51893027 Common - hypothetical protein STH1889 49 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51892572 Common - hypothetical protein STH1434 41 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 51893100 Nonpathogen - hypothetical protein STH1962 1 None None None 51893233 Common - hypothetical protein STH2095 10 COG5349 COG5349, Uncharacterized protein conserved in bacteria Function unknown 51892647 Common - ABC transporter permease protein STH1509 180 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 51892089 Common - PTS system cellobiose-specific IIB component STH951 30 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 51893703 Common - hypothetical protein STH2565 27 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 51891145 Common gyrA DNA gyrase A subunit STH7 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 51891303 Common - hypothetical protein STH165 16 COG1733 COG1733, Predicted transcriptional regulators Transcription 51892716 Nonpathogen - hypothetical protein STH1578 1 None None None 51892225 Common - hypothetical protein STH1087 2 None None None 51891965 Common - haloacid dehalogenase-like hydrolase STH827 91 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 51892781 Common - competence-damage inducible protein STH1643 212 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 51891428 Nonpathogen - hypothetical protein STH290 1 None None None 51891449 Common - hypothetical protein STH311 28 None None None 51893803 Common - hypothetical protein STH2665 152 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 51893145 Common - two-component response regulator STH2007 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51894428 Common hydN2 electron transport protein STH3294 167 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 51891603 Nonpathogen - hypothetical protein STH465 1 None None None 51891611 Common - ComE-like competence protein STH473 167 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 51893834 Common - hypothetical protein STH2696 37 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 51893574 Common - hypothetical protein STH2436 5 None None None 51894019 Nonpathogen - hypothetical protein STH2883 1 None None None 51893178 Common - hypothetical protein STH2040 158 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 51893600 Nonpathogen - hypothetical protein STH2462 1 None None None 51892317 Nonpathogen - hypothetical protein STH1179 1 None None None 51894370 Common mfd transcription-repair coupling factor STH3235 241 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 51893338 Nonpathogen - hypothetical protein STH2200 1 None None None 51893614 Common - putative cyclase/dehydrase STH2476 30 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 51891931 Common - DeoR-family transcriptional regulator STH793 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 51893529 Common - putative transcriptional regulator STH2391 180 COG1959 COG1959, Predicted transcriptional regulator Transcription 51891979 Common - hypothetical protein STH841 73 COG2013 COG2013, Uncharacterized conserved protein Function unknown 51892886 Common mutL DNA mismatch repair protein STH1748 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 51892088 Common - transcription antiterminator BglG family STH950 30 COG3711 BglG, Transcriptional antiterminator Transcription 51894375 Common - UDP-N-acetylglucosamine pyrophosphorylase STH3240 231 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 51892677 Common cheD chemotaxis methylation protein STH1539 60 COG1871 CheD, Chemotaxis protein; stimulates methylation of MCP proteins Cell motility and secretion / Signal transduction mechanisms 51892399 Common pyrE orotate phosphoribosyltransferase STH1261 112 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 51891920 Nonpathogen - conserved domain protein, glutamate-rich STH782 1 None None None 51891404 Nonpathogen - hypothetical protein STH266 1 None None None 51893685 Common - putative transcriptional regulator STH2547 11 COG4189 COG4189, Predicted transcriptional regulator Transcription 51893917 Nonpathogen - hypothetical protein STH2779 2 None None None 51893234 Common - cytochrome c oxidase subunit II STH2096 160 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 51891304 Common - hypothetical protein STH166 84 COG1403 McrA, Restriction endonuclease Defense mechanisms 51893910 Common nuoI2 NADH dehydrogenase I subunit I STH2772 188 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 51893653 Common - 2-heptaprenyl-1,4-naphthoquinone methyltransferase STH2515 227 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51891901 Common - phosphate ABC transporter permease protein STH763 227 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51892101 Common - NADH dehydrogenase STH963 147 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 51894238 Common - NADH dehydrogenase subunit STH3103 159 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 51892722 Common - hypothetical protein STH1584 73 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 51893235 Common - cytochrome C oxidase subunit I STH2097 171 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 51893309 Common - hypothetical protein STH2171 41 COG1479 COG1479, Uncharacterized conserved protein Function unknown 51891425 Common - group II intron-encoding maturase variant STH287 34 None None None 51892608 Common - tRNA methyltransferase STH1470 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 51891625 Common - alkaline proteinase STH487 129 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 51893990 Common - phosphoribosylglycinamide formyltransferase STH2852 221 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 51893107 Common - ABC transporter substrate-binding protein STH1969 43 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51893256 Nonpathogen - hypothetical protein STH2118 1 None None None 51892314 Common - MarR family transcriptional regulator STH1176 39 COG1846 MarR, Transcriptional regulators Transcription 51892896 Nonpathogen - hypothetical protein STH1758 1 COG3679 COG3679, Uncharacterized conserved protein Function unknown 51891140 Common - DNA polymerase III beta subunit STH2 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 51891430 Common - hypothetical protein STH292 63 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 51892150 Nonpathogen - small multi-drug export protein STH1012 1 COG2426 COG2426, Predicted membrane protein Function unknown 51892778 Nonpathogen gerKB2 spore germination protein KB STH1640 5 None None None 51891424 Nonpathogen - group II intron-encoding maturase variant STH286 1 None None None 51892517 Nonpathogen - hypothetical protein, proline-rich STH1379 1 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 51892726 Common nuoC1 NADH dehydrogenase I subunit C STH1588 166 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 51894023 Common - molybdopterin converting factor small subunit STH2887 29 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 51894395 Common - DNA replication protein DnaC STH3260 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51893215 Common - hypothetical protein STH2077 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 51893300 Common - branched-chain alpha-keto acid dehydrogenase E1 alpha subunit STH2162 155 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 51892204 Common - UDP-N-acetylmuramyl tripeptide synthase STH1066 122 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 51892815 Common - hypothetical protein STH1677 43 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51892157 Nonpathogen - hypothetical protein STH1019 1 None None None 51893146 Nonpathogen - hypothetical protein STH2008 1 None None None 51891659 Nonpathogen - hypothetical protein, alanine-rich STH521 1 None None None 51892971 Common spoIVB stage IV sporulation protein B STH1833 17 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 51893791 Common - oligopeptide ABC transporter permease protein STH2653 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894280 Nonpathogen - hypothetical protein STH3145 1 None None None 51893152 Common - group II intron-encoding maturase STH2014 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51891521 Common - tungstate ABC transporter permease protein STH383 194 COG4662 TupA, ABC-type tungstate transport system, periplasmic component Coenzyme metabolism 51893705 Nonpathogen - hypothetical protein STH2567 1 None None None 51892185 Common - superoxide dismutase STH1047 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 51894305 Common - D-Aminoacylase STH3170 79 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 51891605 Common - hypothetical protein STH467 10 None None None 51891295 Common - hydroxyethylthiazole kinase and thiamine-phosphate pyrophosphorylase STH157 167 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 51893877 Common - homoserine dehydrogenase STH2739 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 51894384 Common - dimethyladenosine transferase STH3249 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 51893535 Nonpathogen - hypothetical protein STH2397 1 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 51894213 Common - protein translation elongation factor G STH3078 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 51893814 Common - LysR family transcriptional regulator STH2676 193 COG0583 LysR, Transcriptional regulator Transcription 51893664 Common - hypothetical protein STH2526 36 COG4869 PduL, Propanediol utilization protein Secondary metabolites biosynthesis, transport, and catabolism 51894300 Common - hypothetical protein STH3165 14 COG5482 COG5482, Uncharacterized conserved protein Function unknown 51891245 Common - putative transport system permease protein STH107 48 None None None 51894135 Nonpathogen fliJ flagellar basal-body protein STH2999 1 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 51891861 Common - methyl-accepting chemotaxis protein STH723 113 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51892642 Common - hypothetical protein STH1504 21 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 51893952 Nonpathogen - hypothetical protein STH2814 1 None None None 51891490 Common - putative GTPase STH352 168 COG1160 COG1160, Predicted GTPases General function prediction only 51892558 Nonpathogen - hypothetical protein STH1420 1 None None None 51893192 Common - oxidoreductase similar to anaerobic dimethyl sulfoxide reductase subunit C STH2054 14 COG3302 DmsC, DMSO reductase anchor subunit General function prediction only 51893557 Common - putative acetyltransferase STH2419 105 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51891187 Common - hypothetical protein STH49 11 None None None 51893632 Nonpathogen - hypothetical protein STH2494 4 None None None 51894015 Common - flottilin STH2879 45 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 51892756 Common - branched chain amino acid ABC transporter ATP-binding protein STH1618 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51891458 Nonpathogen - putative glutaredoxin STH320 1 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 51892785 Common - ATP-dependent RNA helicase STH1647 237 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 51891393 Common - ABC transporter substrate-binding protein STH255 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 51891967 Common - putative mercury ion binding protein STH829 52 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 51893188 Common - hypothetical protein STH2050 3 None None None 51891849 Common dmsC2 anaerobic dimethyl sulfoxide reductase subunit C STH711 23 COG3302 DmsC, DMSO reductase anchor subunit General function prediction only 51891276 Common - putative N-acetyl-mannosamine transferase STH138 109 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 51891234 Common - L-lactate permease STH96 105 COG1620 LldP, L-lactate permease Energy production and conversion 51892610 Common - signal peptidase I STH1472 193 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 51894055 Common - putative phosphatase STH2919 109 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 51893985 Common - hypothetical protein STH2847 53 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51891410 Common - transposase subunit STH272 81 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891218 Common - dCMP deaminase STH80 128 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 51892012 Common - sulfate ABC transporter ATP-binding protein STH874 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51894449 Common - replicative DNA helicase STH3315 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 51892872 Nonpathogen - hypothetical protein STH1734 1 None None None 51891466 Nonpathogen - hypothetical protein STH328 1 None None None 51894120 Common fliA RNA polymerase sigma factor related to flagellar biosynthesis STH2984 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51894410 Common - AcrB family membrane transport protein STH3276 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 51893783 Nonpathogen - hypothetical protein STH2645 1 None None None 51893611 Nonpathogen - hypothetical protein STH2473 4 None None None 51894039 Common - molybdenum cofactor biosynthesis protein C STH2903 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 51891589 Common - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase STH451 177 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 51893074 Common - hypothetical protein STH1936 18 COG4821 COG4821, Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain General function prediction only 51892136 Common - molybdenum ABC transporter ATP-binding protein STH998 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51893499 Common - branched chain amino acid ABC transporter substrate-binding protein STH2361 149 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51892015 Common - peptidase M23/M37 family STH877 186 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51893035 Common - putative phosphoserine phosphatase STH1897 19 COG4359 COG4359, Uncharacterized conserved protein Function unknown 51893171 Common - hypothetical protein STH2033 14 COG2345 COG2345, Predicted transcriptional regulator Transcription 51893583 Common - signal peptidase I STH2445 179 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 51893126 Common - putative alpha-isopropylmalate/homocitrate synthase family transferase STH1988 200 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 51892938 Nonpathogen - hypothetical protein STH1800 1 None None None 51893326 Nonpathogen - hypothetical protein STH2188 1 None None None 51891165 Common - hypothetical protein STH27 85 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 51891342 Common - stage V sporulation protein AE STH204 15 None None None 51892535 Nonpathogen - hypothetical protein, proline- and glycine-rich STH1397 1 None None None 51894076 Nonpathogen - hypothetical protein STH2940 1 None None None 51894241 Common - hypothetical protein STH3106 9 None None None 51891208 Common - penicillin amidase STH70 73 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 51892479 Common - phosphopantothenate-cysteine ligase STH1341 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 51893253 Common - 3-isopropylmalate dehydratase small subunit STH2115 211 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 51891691 Common - putative alanine racemase STH553 16 COG3457 COG3457, Predicted amino acid racemase Amino acid transport and metabolism 51893544 Nonpathogen - hypothetical protein STH2406 2 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 51893130 Common - hypothetical protein STH1992 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 51892512 Nonpathogen - hypothetical protein STH1374 1 None None None 51891733 Nonpathogen - hypothetical protein STH595 8 None None None 51891840 Common - putative coenzyme A ligase STH702 115 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 51894255 Common - serine O-acetyltransferase STH3120 221 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 51893743 Common - nicotinate phosphoribosyltransferase STH2605 109 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 51894032 Common - putative hydrolase of the HAD superfamily STH2896 141 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51894260 Common - transcriptional regulator STH3125 84 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 51892850 Nonpathogen - hypothetical protein STH1712 1 None None None 51892390 Common agaS tagatose-6-phosphate aldose/ketose isomerase STH1252 68 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 51892488 Nonpathogen - hypothetical protein, glycine-rich STH1350 2 None None None 51891719 Common - hypothetical protein STH581 75 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 51892458 Nonpathogen - hypothetical protein STH1320 1 None None None 51893209 Nonpathogen - hypothetical protein STH2071 1 None None None 51892022 Common - putative general stress protein STH884 8 None None None 51892628 Nonpathogen - hypothetical protein STH1490 1 None None None 51892843 Nonpathogen - hypothetical protein STH1705 1 None None None 51892864 Nonpathogen - hypothetical protein STH1726 1 None None None 51893009 Nonpathogen - hypothetical protein STH1871 5 None None None 51894041 Common - molybdenum cofactor biosynthesis protein STH2905 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51893679 Common ftsH1 cell division protein STH2541 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 51891497 Common clpX ATP-dependent protease ATP-binding subunit STH359 224 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 51894447 Common - group II intron-encoding maturase STH3313 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51891835 Common - hypothetical protein STH697 18 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 51891528 Common - putative secretion ATPase STH390 181 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 51894462 Common - hypothetical protein STH3328 13 None None None 51893317 Common - glycerol-3-phosphate ABC transporter substarate-binding protein STH2179 115 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 51892160 Common - two-component sensor histidine kinase STH1022 130 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51892658 Common - hypothetical protein STH1520 56 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 51894040 Common - molybdenum cofactor biosynthesis protein A STH2904 202 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 51892950 Common spoIIAC sporulation sigma factor SigF STH1812 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51892964 Common - butyrate kinase STH1826 110 COG3426 COG3426, Butyrate kinase Energy production and conversion 51893079 Common - PTS system fructose/mannose-specific IID component STH1941 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 51892543 Nonpathogen - hypothetical protein STH1405 1 None None None 51891804 Common - hypothetical protein STH666 10 None None None 51893906 Common nuoM2 NADH dehydrogenase I subunit M STH2768 209 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 51891883 Common - PhoU-family transcriptional regulator STH745 199 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 51893516 Nonpathogen - hypothetical protein STH2378 1 None None None 51891760 Nonpathogen - hypothetical protein STH622 1 None None None 51891620 Common - GTP-binding protein LepA STH482 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 51891698 Common - hypothetical protein STH560 11 None None None 51891723 Common - hypothetical protein STH585 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 51894324 Common - formate-tetrahydrofolate ligase STH3189 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 51893963 Common - NAD-dependent DNA ligase STH2825 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 51891662 Common - hypothetical protein STH524 54 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 51893595 Common - putative Sec-independent protein translocase STH2457 5 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 51893997 Nonpathogen - hypothetical protein STH2859 1 None None None 51891220 Common - UDP-N-acetylglucosamine 2-epimerase STH82 153 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 51892470 Common - fibronectin-binding protein STH1332 89 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 51892083 Nonpathogen - hypothetical protein STH945 9 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 51893202 Common - hypothetical protein STH2064 2 None None None 51892834 Common - 5'-methylthioadenosine phosphorylase STH1696 168 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 51892293 Common - ABC transporter permease protein STH1155 224 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 51893933 Common - RNA polymerase ECF-type sigma factor STH2795 160 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51894316 Common - transposase STH3181 55 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893483 Common - micrococcal nuclease-like protein STH2345 55 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 51891441 Common - hypothetical protein STH303 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 51893805 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type STH2667 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 51891808 Common - transposase-like protein STH670 43 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892789 Common - ABC transporter ATP-binding protein STH1651 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51891182 Common - putative middle wall protein precursor STH44 25 None None None 51893568 Common - D-tyrosyl-tRNA deacylase STH2430 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 51892167 Common - putative N-acetylmuramoyl-L-alanine amidase STH1029 139 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 51892110 Common - hypothetical protein STH972 25 COG2043 COG2043, Uncharacterized protein conserved in archaea Function unknown 51893417 Common - transposase STH2279 80 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893958 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B STH2820 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 51891229 Common - F0F1 ATP synthase subunit beta STH91 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 51893831 Common - MarR family transcriptional regulator STH2693 132 COG1846 MarR, Transcriptional regulators Transcription 51892931 Common - hypothetical protein STH1793 11 COG3427 COG3427, Uncharacterized conserved protein Function unknown 51893095 Nonpathogen - ABC transporter permease protein STH1957 1 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891173 Common - lysine 2,3-aminomutase STH35 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 51891388 Nonpathogen - hypothetical protein STH250 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 51892708 Nonpathogen - hypothetical protein STH1570 1 None None None 51892767 Common - ABC transporter ATP-binding protein STH1629 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51891714 Common - hypothetical protein STH576 25 COG4832 COG4832, Uncharacterized conserved protein Function unknown 51893068 Common - hypothetical protein STH1930 12 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 51892745 Common - tRNA/rRNA methyltransferase STH1607 153 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 51893043 Nonpathogen - hypothetical protein STH1905 1 None None None 51891746 Common - ABC transporter ATP-binding protein STH608 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51891850 Common dmsB2 anaerobic dimethyl sulfoxide reductase subunit B STH712 162 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51893166 Nonpathogen - hypothetical protein STH2028 1 COG2153 ElaA, Predicted acyltransferase General function prediction only 51891974 Common - purine nucleoside phosphorylase STH836 157 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 51891997 Nonpathogen - hypothetical protein STH859 1 None None None 51892571 Common - germination protease STH1433 15 None None None 51893292 Common - short chain dehydrogenase STH2154 5 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892698 Common - Fur family transcriptional regulator STH1560 193 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 51892962 Common - hypothetical protein STH1824 34 COG1379 COG1379, Uncharacterized conserved protein Function unknown 51894070 Common - growth inhibitor STH2934 57 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 51894359 Common - putative site-specific modification DNA-methyltransferase STH3224 17 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 51893575 Common - GTP pyrophosphokinase STH2437 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 51892326 Common - putative lactoylglutathione lyase STH1188 90 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51893260 Nonpathogen - hypothetical protein STH2122 1 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 51892926 Common - hypothetical protein STH1788 20 COG3870 COG3870, Uncharacterized protein conserved in bacteria Function unknown 51891645 Common - ribosomal protein L11 methyltransferase STH507 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 51892426 Nonpathogen - hypothetical protein STH1288 1 None None None 51892007 Common - hypothetical protein STH869 53 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 51894222 Common rplJ 50S ribosomal protein L10 STH3087 216 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 51893429 Common - hypothetical protein STH2291 12 COG1700 COG1700, Uncharacterized conserved protein Function unknown 51892523 Nonpathogen - hypothetical protein STH1385 1 None None None 51894105 Nonpathogen - putative ATP-dependent DNA helicase STH2969 2 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51893435 Nonpathogen - hypothetical protein STH2297 12 None None None 51892589 Common - 3-oxoacyl-(acyl-carrier protein) reductase STH1451 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51894403 Common - arginine/lysine/ornithine decarboxylase STH3269 88 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 51894077 Nonpathogen - hypothetical protein STH2941 1 None None None 51894329 Common - histidine ammonia-lyase STH3194 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 51891962 Common - branched chain amino acid ABC transporter ATP-binding protein STH824 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51893465 Common - hypothetical protein STH2327 27 COG1433 COG1433, Uncharacterized conserved protein Function unknown 51894262 Common - putative nucleic-acid-binding protein STH3127 28 COG1623 COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) General function prediction only 51892278 Nonpathogen - multidrug efflux protein variant STH1140 1 None None None 51892487 Common - hypothetical protein STH1349 219 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 51892759 Common - polysaccharide deacetylase STH1621 99 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51891160 Common - cyanate hydratase STH22 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 51891545 Nonpathogen - hypothetical protein STH407 1 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 51893797 Common - small acid-soluble spore protein STH2659 9 None None None 51891159 Common - sulfate transporter family protein STH21 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 51891506 Nonpathogen - hypothetical protein STH368 1 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 51894201 Common rpsQ 30S ribosomal protein S17 STH3066 230 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 51894206 Common rpsS 30S ribosomal protein S19 STH3071 247 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 51893613 Nonpathogen - hypothetical protein STH2475 1 None None None 51891562 Common - hypothetical protein STH424 43 COG5011 COG5011, Uncharacterized protein conserved in bacteria Function unknown 51894424 Common - two-component response regulator, CheY-like STH3290 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51894098 Common - RNA polymerase ECF-type sigma factor STH2962 172 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51893281 Common - hypothetical protein STH2143 16 COG4378 COG4378, Uncharacterized protein conserved in bacteria Function unknown 51891943 Common - 3-oxoacyl-(acyl-carrier protein) reductase STH805 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51894151 Common - TetR family transcriptional regulator STH3015 117 COG1309 AcrR, Transcriptional regulator Transcription 51891594 Common - hypothetical protein STH456 12 COG4392 COG4392, Predicted membrane protein Function unknown 51893422 Nonpathogen - hypothetical protein STH2284 1 None None None 51892505 Common - hypothetical protein STH1367 142 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51894291 Nonpathogen - hypothetical protein STH3156 1 None None None 51891532 Nonpathogen - hypothetical protein STH394 1 COG4655 COG4655, Predicted membrane protein Function unknown 51892991 Common - polysaccharide deacetylase STH1853 108 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51894416 Common - molybdopterin converting factor small subunit STH3282 22 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 51893376 Nonpathogen - group II intron-encoding maturase variant STH2238 1 None None None 51893858 Common - transposase STH2720 79 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51894089 Common - group II intron-encoding maturase STH2953 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893363 Nonpathogen - hypothetical protein STH2225 5 None None None 51892194 Nonpathogen - hypothetical protein STH1056 1 None None None 51894451 Common - 50S ribosomal protein L9 STH3317 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 51892057 Common - nitrate reductase component, cytochrome C-type protein STH919 23 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 51892636 Common - hypothetical protein STH1498 173 COG0628 PerM, Predicted permease General function prediction only 51893029 Common - 23S rRNA pseudouridine synthase STH1891 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 51891874 Common - cytochrome C biogenesis protein STH736 125 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 51894357 Common - hypothetical protein STH3222 60 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 51891904 Nonpathogen - putative transcriptional regulator STH766 7 None None None 51891814 Common - methyl-accepting chemotaxis protein STH676 135 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51892804 Nonpathogen recX putative regulatory protein STH1666 2 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 51891588 Nonpathogen - 4-oxalocrotonate tautomerase STH450 1 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 51893380 Nonpathogen - transposase-like protein STH2242 1 None None None 51894111 Nonpathogen - hypothetical protein STH2975 1 None None None 51893714 Nonpathogen - hypothetical protein STH2576 1 None None None 51892989 Nonpathogen - hypothetical protein STH1851 6 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 51893059 Common - glycine cleavage system protein H STH1921 188 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 51891637 Common - hypothetical protein STH499 14 None None None 51892249 Common - oligopeptide ABC transporter ATP-binding protein STH1111 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 51893454 Common - GntR family transcriptional regulator STH2316 119 COG2378 COG2378, Predicted transcriptional regulator Transcription 51892866 Nonpathogen - hypothetical protein, glutamine-rich STH1728 3 COG1633 COG1633, Uncharacterized conserved protein Function unknown 51892497 Common - 50S ribosomal protein L28 STH1359 89 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 51891489 Common - BglG family transcription antiterminator STH351 29 COG3711 BglG, Transcriptional antiterminator Transcription 51893737 Common - putative cytochrome Ni/Fe component of hydrogenase STH2599 33 COG5557 COG5557, Polysulphide reductase Energy production and conversion 51891236 Common - hypothetical protein STH98 24 COG3552 CoxE, Protein containing von Willebrand factor type A (vWA) domain General function prediction only 51891199 Common - putative S-layer associated protein STH61 20 None None None 51892316 Nonpathogen - hypothetical protein STH1178 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 51892385 Common agaD PTS system N-acetylgalactosamine-specific IID component STH1247 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 51891697 Common - hypothetical protein STH559 8 None None None 51892533 Nonpathogen - hypothetical protein STH1395 1 None None None 51891547 Common - prolipoprotein diacylglyceryl transferase STH409 202 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 51893672 Common - malate dehydrogenase STH2534 187 COG0281 SfcA, Malic enzyme Energy production and conversion 51891255 Common - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase STH117 188 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 51893011 Common tdh L-threonine 3-dehydrogenase STH1873 210 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 51891989 Common - dephospho-CoA kinase STH851 207 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 51893200 Common - reactivating factor for ethanolamine ammonia lyase STH2062 17 COG4819 EutA, Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition Amino acid transport and metabolism 51893778 Common - succinate dehydrogenase iron-sulfur protein STH2640 209 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 51892234 Common - potassium uptake system protein STH1096 140 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 51893898 Common - ribonucleotide-diphosphate reductase subunit alpha STH2760 224 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 51893207 Nonpathogen - hypothetical protein STH2069 1 None None None 51892066 Nonpathogen - hypothetical protein STH928 1 None None None 51892280 Common - phosphoadenosine phosphosulfate reductase STH1142 168 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 51893968 Common - hypothetical protein STH2830 27 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 51892504 Common - hypothetical protein STH1366 163 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51893173 Common - hypothetical protein STH2035 182 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 51893961 Common - oligopeptide ABC transporter ATP-binding protein STH2823 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 51892467 Common - hypothetical protein STH1329 4 None None None 51893114 Common - hypothetical protein STH1976 185 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 51891367 Common - ammonium transporter STH229 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 51894246 Common - hypothetical protein STH3111 27 COG0456 RimI, Acetyltransferases General function prediction only 51892091 Common - PTS system cellobiose-specific IIA component STH953 30 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 51892561 Common - oligopeptide ABC transporter permease protein STH1423 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51892928 Common - spore peptidoglycan hydrolase STH1790 35 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 51891365 Nonpathogen - hypothetical protein, proline-rich STH227 1 COG3417 FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) General function prediction only 51892805 Nonpathogen - hypothetical protein STH1667 1 None None None 51893040 Common - putative serine esterase STH1902 114 COG0400 COG0400, Predicted esterase General function prediction only 51892205 Common - putative cobyric acid synthase STH1067 63 COG3442 COG3442, Predicted glutamine amidotransferase General function prediction only 51892706 Common - putative beta-lactamase STH1568 59 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51892978 Nonpathogen - hypothetical protein STH1840 1 None None None 51893506 Common - hypothetical protein STH2368 55 COG2267 PldB, Lysophospholipase Lipid metabolism 51893752 Nonpathogen - RNA polymerase ECF-type sigma factor STH2614 1 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892113 Common - hypothetical protein STH975 133 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 51894233 Common - formate dehydrogenase associated protein STH3098 134 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 51893393 Common - TetR family transcriptional regulator STH2255 166 COG1309 AcrR, Transcriptional regulator Transcription 51894368 Common spoVB stage V sporulation protein B STH3233 37 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 51892840 Common - putative dolichyl-phosphate mannose synthase STH1702 89 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51891910 Common - ribose ABC transporter permease protein STH772 43 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 51894122 Common flhF flagellar GTP-binding protein STH2986 247 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 51892348 Common - UDP-N-acetylglucosamine-N-acetylmuramyl- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase STH1210 207 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 51891754 Common - 4-aminobutyrate aminotransferase STH616 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 51892049 Common - hypothetical protein STH911 40 COG2912 COG2912, Uncharacterized conserved protein Function unknown 51891227 Common - F0F1 ATP synthase subunit alpha STH89 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 51893190 Nonpathogen - hypothetical protein STH2052 1 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 51893847 Nonpathogen - hypothetical protein STH2709 7 None None None 51892078 Common - G/U mismatch-specific DNA glycosylase STH940 32 COG3663 Mug, G:T/U mismatch-specific DNA glycosylase DNA replication, recombination, and repair 51892401 Common - hypothetical protein STH1263 3 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 51891828 Common - two-component response regulator STH690 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51892490 Common - putative protein phosphatase STH1352 132 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 51892352 Common - hypothetical protein STH1214 116 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 51891684 Common - ABC transporter permease protein STH546 5 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 51892285 Common - ABC transporter permease protein STH1147 192 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 51891511 Common mreC rod shape-determining protein STH373 142 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 51893976 Common hisG ATP-phosphoribosyltransferase STH2838 211 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 51892413 Common - NifA family transcriptional regulator STH1275 155 COG3933 COG3933, Transcriptional antiterminator Transcription 51894008 Common - thioredoxin reductase STH2872 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51894033 Common groEL chaperonin GroEL STH2897 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 51891640 Common - heat-inducible transcriptional repressor STH502 151 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 51892849 Common - hypothetical protein STH1711 51 COG2045 COG2045, Phosphosulfolactate phosphohydrolase and related enzymes Coenzyme metabolism / General function prediction only 51894139 Common fliF flagellar basal-body M-ring protein STH3003 126 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 51892227 Common - spore cortex-lytic enzyme precursor STH1089 40 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 51893414 Nonpathogen - hypothetical protein STH2276 1 None None None 51892640 Common proS prolyl-tRNA synthetase STH1502 246 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892581 Common - 50S ribosomal protein L32 STH1443 35 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 51892393 Nonpathogen - hypothetical protein STH1255 1 None None None 51891704 Common - putative sensory box/GGDEF domain protein STH566 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51893240 Common - acylamino-acid-releasing enzyme STH2102 146 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51891795 Common - SNF2 family helicase STH657 140 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 51891914 Nonpathogen - hypothetical protein STH776 1 None None None 51892128 Common - GTP cyclohydrolase STH990 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 51893900 Common - Sir2 family transcriptional regulator STH2762 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 51891355 Common - hypothetical protein STH217 9 COG3368 COG3368, Predicted permease General function prediction only 51891617 Nonpathogen - hypothetical protein STH479 1 None None None 51892369 Common ileS isoleucyl-tRNA synthetase STH1231 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892686 Common - aspartate kinase I STH1548 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 51893886 Common - iron ABC transporter substrate-binding protein STH2748 97 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 51892156 Nonpathogen - hypothetical protein STH1018 1 None None None 51893546 Common - HIT family protein STH2408 172 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 51891606 Common - spermidine/putrescine ABC transporter spermidine/putrescine-binding protein STH468 133 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 51893389 Nonpathogen - hypothetical protein STH2251 2 None None None 51893479 Common - D-allose transporter ATP-binding protein STH2341 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 51893729 Common - selenocysteine synthase STH2591 78 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 51892919 Nonpathogen - hypothetical protein STH1781 1 None None None 51893764 Common - hypothetical protein STH2626 205 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51891293 Nonpathogen - hypothetical protein STH155 7 COG0456 RimI, Acetyltransferases General function prediction only 51892220 Common - methyl-accepting chemotaxis protein STH1082 134 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51894317 Nonpathogen - hypothetical protein STH3182 1 None None None 51892832 Common - nucleoside diphosphate kinase STH1694 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 51893408 Common - hypothetical protein STH2270 25 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 51891335 Nonpathogen - hypothetical protein STH197 1 None None None 51894405 Common - hypothetical protein STH3271 3 None None None 51893020 Common - Fur family transcriptional regulator STH1882 189 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 51894091 Nonpathogen - hypothetical protein STH2955 1 None None None 51893873 Nonpathogen - hypothetical protein STH2735 1 None None None 51894183 Common rpsD 30S ribosomal protein S4 STH3048 246 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 51892442 Common - hypothetical protein STH1304 6 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 51893580 Common - Protein translocase subunit STH2442 204 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 51892679 Common cheB chemotaxis protein-glutamate methylesterase STH1541 221 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 51891890 Common - putative UDP-glucuronosyltransferase STH752 14 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 51892945 Common - phosphoribosylaminoimidazole carboxylase II STH1807 192 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 51891709 Common - oligopeptide ABC transporter permease protein STH571 198 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51894009 Nonpathogen - hypothetical protein STH2873 1 None None None 51891399 Common - hypothetical protein STH261 16 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 51893472 Nonpathogen - hypothetical protein STH2334 1 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 51892040 Common - membrane-associated lipoprotein involved in thiamine biosynthesis STH902 141 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 51891618 Common greA1 transcription elongation factor STH480 204 COG0782 GreA, Transcription elongation factor Transcription 51892449 Common - sugar ABC transporter sugar-binding protein STH1311 116 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 51892325 Common - methylmalonyl-CoA mutase, C-terminal domain STH1187 113 COG2185 Sbm, Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) Lipid metabolism 51891433 Nonpathogen - hypothetical protein STH295 1 None None None 51894269 Common - ATP:guanido phosphotransferase STH3134 25 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 51894142 Common flgB flagella basal body rod protein STH3006 65 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 51891675 Common - spore peptidoglycan hydrolase STH537 54 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 51894433 Common - sigma-54-dependent transcriptional regulator STH3299 216 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51894129 Common fliY flagellar motor switch protein STH2993 125 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 51893036 Nonpathogen - hypothetical protein STH1898 1 None None None 51894382 Common - hypothetical protein STH3247 17 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 51891334 Common - glucosamine--fructose-6-phosphate aminotransferase STH196 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 51891895 Common - Na+-driven multidrug efflux protein STH757 174 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 51894310 Common sdhA succinate dehydrogenase flavoprotein subunit STH3175 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 51893988 Common - phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase STH2850 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 51894361 Nonpathogen - hypothetical protein STH3226 1 None None None 51891756 Nonpathogen - hypothetical protein STH618 1 None None None 51892267 Common - transposase STH1129 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892213 Common - putative D-alanyl-D-alanine carboxypeptidase STH1075 37 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51892823 Common - homoserine O-acetyltransferase STH1685 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 51892902 Nonpathogen - hypothetical protein STH1764 1 COG1107 COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain DNA replication, recombination, and repair 51892668 Nonpathogen - hypothetical protein STH1530 1 None None None 51894282 Nonpathogen - putative menaquinol-cytochrome C reductase STH3147 7 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 51894082 Nonpathogen - hypothetical protein STH2946 1 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 51893894 Common - hypothetical protein STH2756 19 None None None 51893949 Common - hypothetical protein STH2811 39 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 51892861 Common - hypothetical protein STH1723 65 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 51892566 Nonpathogen - hypothetical protein STH1428 1 None None None 51891456 Nonpathogen - hypothetical protein STH318 1 None None None 51892758 Nonpathogen - hypothetical protein STH1620 1 None None None 51894013 Nonpathogen - hypothetical protein STH2877 3 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 51891247 Common - polysulfide reductase subunit A, N-terminal domain STH109 180 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51893635 Nonpathogen - hypothetical protein STH2497 1 None None None 51892468 Common - D-alanine aminotransferase STH1330 177 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 51894220 Common rpoB DNA-directed RNA polymerase subunit beta STH3085 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 51892985 Common - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase STH1847 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 51891314 Common - hypothetical protein STH176 9 COG3595 COG3595, Uncharacterized conserved protein Function unknown 51894231 Common - two-component response regulator STH3096 210 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892888 Common - hypothetical protein STH1750 4 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 51891881 Common - hypothetical protein STH743 4 None None None 51893221 Common - molybdopterin oxidoreductase iron-sulfur binding subunit STH2083 173 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51893662 Nonpathogen - hypothetical protein STH2524 1 None None None 51894386 Common - TatD-related DNase STH3251 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 51892612 Common - ribonuclease HII STH1474 204 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 51892769 Nonpathogen - hypothetical protein STH1631 2 None None None 51891211 Common - peptide chain release factor 1 STH73 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 51892787 Nonpathogen - hypothetical protein STH1649 1 None None None 51892870 Common - cytochrome C biogenesis protein STH1732 203 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 51892210 Common - thioredoxin reductase STH1072 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51893694 Common - homoserine kinase STH2556 121 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 51894068 Common - small acid-soluble spore protein STH2932 15 None None None 51892771 Common - 2-methylthioadenine synthetase STH1633 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 51894037 Nonpathogen - hypothetical protein STH2901 1 None None None 51894053 Common - Uracil-DNA glycosylase STH2917 157 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 51893258 Common - putative sodium/calcium exchanger protein STH2120 115 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 51892974 Common - transcriptional regulator STH1836 64 COG1438 ArgR, Arginine repressor Transcription 51891468 Nonpathogen - hypothetical protein STH330 1 None None None 51894254 Common cysS cysteinyl-tRNA synthetase STH3119 243 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892223 Common - ABC transporter ATP-binding protein STH1085 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51892240 Common - hypothetical protein STH1102 181 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 51891475 Common - hypothetical protein STH337 15 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 51892397 Common - dihydroorotate dehydrogenase electron transfer subunit STH1259 81 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 51892043 Nonpathogen - hypothetical protein STH905 1 None None None 51891402 Nonpathogen - hypothetical protein STH264 1 None None None 51891349 Common - transcriptional regulatory protein, repressor-type STH211 31 COG3327 PaaX, Phenylacetic acid-responsive transcriptional repressor Transcription 51893700 Common hppA membrane-bound proton-translocating pyrophosphatase STH2562 98 COG3808 OVP1, Inorganic pyrophosphatase Energy production and conversion 51892881 Common - ABC transporter ATP-binding protein STH1743 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893000 Common spoIIIAA stage III sporulation protein AA STH1862 29 COG3854 SpoIIIAA, ncharacterized protein conserved in bacteria Function unknown 51893430 Common - hypothetical protein STH2292 31 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 51891157 Common argS arginyl-tRNA synthetase STH19 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51893237 Nonpathogen - hypothetical protein STH2099 1 None None None 51892695 Nonpathogen - hypothetical protein STH1557 1 None None None 51891282 Common - oligopeptide ABC transporter substrate-binding protein STH144 216 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51893105 Nonpathogen - hypothetical protein, glycine-rich STH1967 1 None None None 51892574 Nonpathogen - conserved domain protein, glycine-rich STH1436 1 None None None 51891408 Common - transposase STH270 63 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891180 Common - hypothetical protein STH42 45 COG1432 COG1432, Uncharacterized conserved protein Function unknown 51894154 Common - hypothetical protein STH3018 15 COG2259 COG2259, Predicted membrane protein Function unknown 51894229 Common - formate dehydrogenase associated protein STH3094 135 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 51894021 Common - sigma-54-dependent transcriptional regulator STH2885 170 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51892714 Nonpathogen - hypothetical protein STH1576 2 None None None 51892894 Common - hypothetical protein STH1756 10 None None None 51893827 Common - acetolactate synthase small subunit STH2689 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 51892591 Common - ribonuclease III STH1453 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 51892300 Common - putative RNA polymerase sigma factor SigI STH1162 20 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51892338 Common - hypothetical protein STH1200 140 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 51894419 Common - hypothetical protein STH3285 5 None None None 51893870 Common - group II intron-encoding maturase STH2732 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51894298 Common - two-component sensor histidine kinase STH3163 136 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51891431 Common - oligopeptide ABC transporter substrate-binding protein STH293 105 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51892341 Common carA carbamoyl phosphate synthase small subunit STH1203 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 51894030 Nonpathogen - hypothetical protein STH2894 1 None None None 51893572 Nonpathogen - hypothetical protein STH2434 1 None None None 51892247 Common - oligopeptide ABC transporter permease protein STH1109 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891717 Common - hypothetical protein STH579 8 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51893625 Common - TetR/AcrR family transcriptional regulator STH2487 130 COG1309 AcrR, Transcriptional regulator Transcription 51893148 Common - phosphohydrolase STH2010 16 COG1768 COG1768, Predicted phosphohydrolase General function prediction only 51892103 Common - thioredoxin reductase STH965 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51891142 Common recF DNA repair and genetic recombination protein STH4 167 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 51894236 Common - formate dehydrogenase gamma subunit STH3101 15 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 51892081 Common - adenosylmethionine-8-amino-7-oxononanoate aminotransferase STH943 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 51891833 Common - ABC transporter ATP-binding protein STH695 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51892598 Common - hypothetical protein STH1460 6 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 51893140 Nonpathogen - hypothetical protein STH2002 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892027 Nonpathogen - hypothetical protein STH889 1 None None None 51892826 Common - C4-dicarboxylate transporter STH1688 6 COG3069 DcuC, C4-dicarboxylate transporter Energy production and conversion 51894303 Common - S-layer associated protein, putataive STH3168 20 None None None 51893793 Nonpathogen - hypothetical protein STH2655 6 None None None 51893241 Common - hypothetical protein STH2103 39 COG3714 COG3714, Predicted membrane protein Function unknown 51893942 Common - somatin-like protein STH2804 68 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 51893527 Common - tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase STH2389 214 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 51891977 Common - putative thioesterase STH839 142 COG0824 FcbC, Predicted thioesterase General function prediction only 51891689 Common - hypothetical protein STH551 2 None None None 51893655 Common - ABC transporter ATP-binding protein STH2517 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51894393 Common - thymidylate kinase STH3258 232 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 51892236 Common - group 1 family glycosyl transferase STH1098 97 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51893302 Common - glyceraldehyde-3-phosphate dehydrogenase STH2164 218 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 51892269 Common - IstB helper protein N-terminal domain STH1131 83 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51892664 Common - riboflavin kinase/FMN adenylyltransferase STH1526 210 COG0196 RibF, FAD synthase Coenzyme metabolism 51893618 Nonpathogen - hypothetical protein STH2480 1 None None None 51891257 Nonpathogen - hypothetical protein STH119 1 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51893319 Common - glycerol-3-phosphate ABC transporter permease protein STH2181 156 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 51893018 Common - ABC transporter ATP-binding protein STH1880 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 51893719 Nonpathogen - hypothetical protein STH2581 1 None None None 51892085 Nonpathogen - hypothetical protein STH947 1 None None None 51893999 Common - hypothetical protein STH2861 135 COG2252 COG2252, Permeases General function prediction only 51894436 Common - putative flavin reductase STH3302 58 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 51893490 Common - hypothetical protein STH2352 124 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 51893125 Common - oligoendopeptidase F STH1987 87 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 51891171 Common - similar to multidrug resistance protein variant STH33 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51892191 Common - hypothetical protein STH1053 88 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 51892331 Nonpathogen - hypothetical protein STH1193 1 None None None 51892463 Nonpathogen - hypothetical protein STH1325 1 COG2606 EbsC, Uncharacterized conserved protein Function unknown 51893346 Common - membrane transport protein STH2208 162 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51893710 Nonpathogen - hypothetical protein STH2572 5 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51892549 Common trpS tryptophanyl-tRNA synthetase STH1411 222 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892793 Common - Na+/H+ antiporter subunit STH1655 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 51892299 Common ruvB Holliday junction DNA helicase B STH1161 234 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 51893812 Nonpathogen - hypothetical protein STH2674 1 None None None 51894020 Common - MutT-like protein STH2884 3 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893481 Common - LacI family transcriptional repressor STH2343 128 COG1609 PurR, Transcriptional regulators Transcription 51892291 Nonpathogen - hypothetical protein STH1153 1 None None None 51893518 Nonpathogen - hypothetical protein STH2380 1 None None None 51892121 Common - hypothetical protein STH983 167 COG0316 IscA, Uncharacterized conserved protein Function unknown 51893405 Nonpathogen - transposase-like protein STH2267 1 None None None 51891928 Nonpathogen - hypothetical protein STH790 1 None None None 51893670 Common - succinyl-CoA synthetase alpha subunit STH2532 219 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 51892145 Nonpathogen - hypothetical protein STH1007 1 None None None 51893371 Common - iron-containing alcohol dehydrogenase STH2233 171 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51892024 Common - ATP-dependent DNA helicase STH886 226 COG1201 Lhr, Lhr-like helicases General function prediction only 51893807 Nonpathogen - hypothetical protein STH2669 1 None None None 51894354 Common - iron ABC transporter substrate-binding protein STH3219 148 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 51891811 Nonpathogen - hypothetical protein STH673 22 COG1339 COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon Transcription / Coenzyme metabolism 51891307 Common - RNA polymerase ECF-type sigma factor STH169 171 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892483 Common - putative Zn-dependent protease STH1345 42 COG2738 COG2738, Predicted Zn-dependent protease General function prediction only 51892836 Nonpathogen - hypothetical protein STH1698 1 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 51891990 Common - putative transglycosylase STH852 171 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51892538 Common - transcriptional repressor, BirA-like STH1400 222 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 51892743 Common - hypothetical protein STH1605 10 None None None 51893608 Nonpathogen - putative acetyltransferase STH2470 1 COG0456 RimI, Acetyltransferases General function prediction only 51892451 Common - sugar ABC transporter permease protein STH1313 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 51892424 Common - iron-siderophore uptake ABC system substrate-binding component STH1286 15 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 51894314 Common - hypothetical protein STH3179 77 COG1259 COG1259, Uncharacterized conserved protein Function unknown 51891627 Common - amino acid ABC transporter permease protein STH489 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51892952 Common spoIIAA stage II sporulation protein AA STH1814 26 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 51892198 Common - glutamine ABC transporter substrate-binding protein STH1060 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51894274 Nonpathogen - hypothetical protein, alanine-rich STH3139 1 None None None 51891721 Common - branched-chain alpha-keto acid dehydrogenase E1 alpha subunit STH583 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 51893348 Common - ABC transporter ATP-binding protein STH2210 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51891526 Common - hypothetical protein STH388 21 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 51891766 Common - transcriptional antiterminator of glycerol uptake operon STH628 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 51892165 Nonpathogen - hypothetical protein STH1027 1 None None None 51894465 Nonpathogen - hypothetical protein STH3331 1 None None None 51891802 Common - putative helicase STH664 63 COG1203 COG1203, Predicted helicases General function prediction only 51892883 Common spoVK stage V sporulation protein K STH1745 48 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 51891278 Common ftsX cell-division protein STH140 114 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 51891340 Common - stage V sporulation protein AC STH202 15 None None None 51892134 Common - molybdenum ABC transporter molybdenum-binding protein STH996 149 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 51894052 Common - inosine-5'-monophosphate dehydrogenase STH2916 240 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 51893385 Nonpathogen - hypothetical protein STH2247 1 None None None 51893727 Common - hypothetical protein STH2589 20 COG4365 COG4365, Uncharacterized protein conserved in bacteria Function unknown 51891744 Common - glucosamine-6-phosphate isomerase STH606 99 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 51891513 Common minC septum site-determining protein STH375 89 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 51892363 Common - hypothetical protein STH1225 182 COG1496 COG1496, Uncharacterized conserved protein Function unknown 51893033 Nonpathogen - hypothetical protein STH1895 1 None None None 51892017 Nonpathogen - conserved domain protein, proline-rich STH879 2 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 51892656 Common - hypothetical protein STH1518 155 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 51891263 Common secA preprotein translocase subunit SecA STH125 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 51893497 Common - ABC transporter ATP-binding protein STH2359 248 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51893687 Nonpathogen - hypothetical protein STH2549 1 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 51891783 Common - proline dehydrogenase STH645 134 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 51894171 Common - 3-isopropylmalate dehydrogenase STH3035 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 51893819 Common - O-acetylhomoserine sulfhydrylase STH2681 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 51892332 Common - transposase STH1194 42 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891306 Common - branched-chain amino acid ABC transporter substrate-binding protein STH168 216 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51893904 Common alaS2 alanyl-tRNA synthetase, truncated STH2766 230 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892312 Nonpathogen - hypothetical protein STH1174 1 None None None 51893542 Common - thioredoxin STH2404 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 51892920 Common - sugar ABC transportor ATP-binding protein STH1782 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 51893310 Common - putative membrane transporter STH2172 57 COG2985 COG2985, Predicted permease General function prediction only 51891163 Common - two-component response regulator variant STH25 215 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892477 Common - guanylate kinase STH1339 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 51893740 Common - putative formate dehydrogenase subunit STH2602 159 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51891232 Common - conserved hypothetical iron-sulphur protein STH94 98 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 51893592 Common gerXC spore germination protein GerKC STH2454 15 None None None 51892624 Nonpathogen - conserved hypothetical protein related to flagellar biosynthesis STH1486 11 COG5581 COG5581, Predicted glycosyltransferase Cell envelope biogenesis, outer membrane 51894218 Nonpathogen - hypothetical protein STH3083 1 None None None 51891731 Common - MerR family transcriptional regulator STH593 10 COG0789 SoxR, Predicted transcriptional regulators Transcription 51891491 Common - biotin synthase STH353 112 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 51893007 Nonpathogen - putative membrane transporter STH1869 2 None None None 51893180 Nonpathogen - hypothetical protein STH2042 1 None None None 51892859 Common ftsA1 cell division protein STH1721 169 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 51892435 Common - transposase-like protein STH1297 56 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891264 Common ftsH2 cell division protein STH126 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 51892117 Nonpathogen - hypothetical protein STH979 1 None None None 51892519 Common - hypothetical protein containing MutT-like domain STH1381 103 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893648 Nonpathogen - hypothetical protein STH2510 1 None None None 51893964 Common - ATP-dependent DNA helicase STH2826 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51894468 Common gidB Glucose inhibited division protein B STH3334 195 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 51894027 Common - acetyltransferase STH2891 64 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 51892845 Common - oxidoreductase STH1707 205 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 51893537 Common - two-component response regulator STH2399 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51892202 Common - membrane transport protein STH1064 172 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51893733 Common - putative fosmidmycin resistance protein STH2595 66 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51893244 Common gerKA1 spore germination protein KA STH2106 15 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 51893456 Common - hypothetical protein STH2318 70 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 51892654 Common - putative dinitrogenase reductase activating glycohydrolase STH1516 49 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 51892251 Common - hypothetical protein STH1113 68 COG2323 COG2323, Predicted membrane protein Function unknown 51893387 Nonpathogen - hypothetical protein STH2249 9 None None None 51891285 Common - oligopeptide ABC transporter substrate-binding protein STH147 216 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51892265 Common - molybdopterin biosynthesis protein STH1127 126 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 51893155 Common - MarR family transcriptional regulator STH2017 39 COG1846 MarR, Transcriptional regulators Transcription 51892098 Common - 3-oxoacyl-[acyl-carrier-protein] synthase STH960 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51892868 Common - cytochrome C biogenesis protein STH1730 128 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 51893442 Common - short-chain dehydrogenase STH2304 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51893057 Common - glycine dehydrogenase subunit 2 STH1919 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 51892728 Common nuoE1 NADH dehydrogenase I subunit E STH1590 155 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 51893424 Common - transposase STH2286 86 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892583 Nonpathogen - hypothetical protein STH1445 1 None None None 51891395 Common - NAD/NADP octopine/nopaline dehydrogenase STH257 26 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 51893776 Nonpathogen - succinate dehydrogenase membrane subunit STH2638 3 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 51891469 Nonpathogen - hypothetical protein STH331 1 None None None 51893971 Common hisF imidazole glycerol phosphate synthase subunit STH2833 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 51894431 Common - putative formate transporter STH3297 89 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 51893919 Common - transcriptional regulator STH2781 9 COG1396 HipB, Predicted transcriptional regulators Transcription 51891551 Common - pyruvate dehydrogenase E2 STH413 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 51893420 Nonpathogen - hypothetical protein STH2282 4 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 51891249 Common - molybdopterin oxidoreductase iron-sulfur binding subunit STH111 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51892354 Common - hypothetical protein STH1216 25 COG3879 COG3879, Uncharacterized protein conserved in bacteria Function unknown 51891926 Common - serine protein kinase STH788 73 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 51894002 Common - hypothetical protein STH2864 35 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 51892174 Common - oligopeptide ABC transporter permease protein STH1036 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891695 Common - hypothetical protein STH557 12 None None None 51892260 Common tyrS tyrosyl-tRNA synthetase STH1122 242 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892774 Common - putative GTP pyrophosphokinase STH1636 33 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 51891556 Common - hypothetical protein STH418 7 None None None 51892465 Common - hypothetical protein STH1327 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 51894322 Common - dihydroneopterin aldolase STH3187 82 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 51891972 Common - putative rRNA methylase STH834 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 51893993 Common - phosphoribosylformylglycinamidine synthetase STH2855 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 51893823 Common - dihydroxy-acid dehydratase STH2685 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 51891360 Common - 2-ketoisovalerate ferredoxin reductase STH222 111 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51894103 Common - hypothetical protein STH2967 10 COG2887 COG2887, RecB family exonuclease DNA replication, recombination, and repair 51893508 Common - ArsR family transcriptional regulator STH2370 174 COG0640 ArsR, Predicted transcriptional regulators Transcription 51893139 Nonpathogen - hypothetical protein STH2001 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51893467 Common - rubrerythrin STH2329 79 COG1592 COG1592, Rubrerythrin Energy production and conversion 51892447 Common - hypothetical protein STH1309 5 None None None 51891653 Common - hypothetical protein STH515 152 COG1610 COG1610, Uncharacterized conserved protein Function unknown 51893956 Common - RNA methyltransferase STH2818 214 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 51893492 Nonpathogen - hypothetical protein STH2354 2 None None None 51891752 Nonpathogen - hypothetical protein STH614 1 None None None 51891821 Common - carbon starvation-induced protein STH683 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 51893945 Common - hypothetical protein STH2807 19 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 51892795 Common - Na+/H+ antiporter subunit STH1657 81 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 51893437 Common - hypothetical protein STH2299 68 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 51893266 Nonpathogen - hypothetical protein STH2128 1 None None None 51894072 Common - alanine racemase STH2936 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 51892282 Nonpathogen - hypothetical protein STH1144 3 None None None 51892123 Common - hypothetical protein STH985 88 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 51892481 Common - polypeptide deformylase STH1343 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 51893368 Nonpathogen - hypothetical protein STH2230 1 None None None 51894327 Common - glutamate formiminotransferase STH3192 22 COG3643 COG3643, Glutamate formiminotransferase Amino acid transport and metabolism 51892009 Nonpathogen - hypothetical protein STH871 1 None None None 51891712 Common glyQ glycyl-tRNA synthetase subunit alpha STH574 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 51892276 Nonpathogen - hypothetical protein STH1138 1 None None None 51893891 Common - transcriptional repressor STH2753 170 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 51892176 Common - oligopeptide ABC transporter substrate-binding protein STH1038 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51891774 Common - hypothetical protein STH636 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 51891484 Common - hypothetical protein STH346 24 COG2155 COG2155, Uncharacterized conserved protein Function unknown 51893365 Common - hypothetical protein STH2227 96 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 51892287 Common - NH(3)-dependent NAD+ synthetase STH1149 198 COG0171 NadE, NAD synthase Coenzyme metabolism 51892634 Common - undecaprenyl pyrophosphate synthase STH1496 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 51891508 Common maf septum formation protein Maf STH370 199 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 51892055 Common napA nitrate reductase STH917 198 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51893299 Common - branched-chain alpha-keto acid dehydrogenase E1 beta subunit STH2161 181 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 51891615 Nonpathogen - hypothetical protein STH477 3 None None None 51894377 Nonpathogen - hypothetical protein STH3242 1 None None None 51894193 Common rpsE 30S ribosomal protein S5 STH3058 246 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 51891598 Common - hypothetical protein STH460 34 COG1714 COG1714, Predicted membrane protein/domain Function unknown 51894079 Common - putative post-translocation molecular chaperone STH2943 129 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 51891534 Common - hypothetical protein STH396 8 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 51892643 Nonpathogen - hypothetical protein STH1505 5 COG3794 PetE, Plastocyanin Energy production and conversion 51893213 Common - ABC transporter ATP-binding protein STH2075 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51891564 Common - ribonuclease G STH426 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 51891854 Nonpathogen - hypothetical protein STH716 1 None None None 51893912 Common nuoD2 NADH dehydrogenase I subunit D STH2774 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 51891462 Nonpathogen - hypothetical protein STH324 1 None None None 51894414 Common - PTS system phosphocarrier protein Hpr STH3280 34 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 51892456 Common - LysR family transcriptional regulator STH1318 192 COG0583 LysR, Transcriptional regulator Transcription 51894092 Nonpathogen - hypothetical protein STH2956 1 None None None 51892289 Common - hypothetical protein STH1151 43 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 51891268 Common - oligopeptide ABC transporter permease protein STH130 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51892684 Common spoVFB dipicolinate synthase subunit B STH1546 14 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 51892429 Common - hypothetical protein STH1291 3 None None None 51891591 Common - ABC transporter ATP-binding protein STH453 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51893298 Common - branched-chain alpha-keto acid dehydrogenase E2 STH2160 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 51892673 Common cheW2 chemotaxis signal transduction protein STH1535 128 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 51893406 Nonpathogen - hypothetical protein STH2268 1 None None None 51893872 Common - phosphoglucomutase/phosphomannomutase family protein STH2734 236 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 51892071 Nonpathogen - ferredoxin oxidoreductase STH933 18 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 51893488 Common - hypothetical protein STH2350 97 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51891956 Common - hypothetical protein STH818 84 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 51894407 Common - TetR family transcriptional regulator STH3273 146 COG1309 AcrR, Transcriptional regulator Transcription 51892947 Common - hypothetical protein STH1809 135 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 51891949 Common - transposase STH811 45 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893062 Common - phosphoglycerate mutase variant STH1924 151 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 51891447 Common - hypothetical protein STH309 87 COG1203 COG1203, Predicted helicases General function prediction only 51893759 Common - amino acid ABC transporter ATP-binding protein STH2621 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51892440 Common - endonuclease III STH1302 220 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 51893735 Common - formate dehydrogenase associated protein STH2597 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 51893288 Common - MutT-like protein STH2150 143 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51891940 Common - branched-chain amino acid ABC transporter permease protein STH802 151 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51892914 Common spoVS stage V sporulation protein S STH1776 24 COG2359 SpoVS, Uncharacterized protein conserved in bacteria Function unknown 51891337 Common - TerC family membrane protein STH199 100 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 51894047 Common - TetR family transcriptional regulator? STH2911 41 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 51891893 Common - minor extracellular serine protease STH755 87 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 51892221 Common - methyl-accepting chemotaxis protein STH1083 143 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51893564 Nonpathogen - hypothetical protein STH2426 1 None None None 51891194 Nonpathogen - hypothetical protein STH56 1 None None None 51892031 Common - arsenite efflux transporter STH893 90 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 51894127 Common fliP flagellar biosynthesis protein FliP STH2991 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 51892406 Common - hypothetical protein STH1268 25 COG1306 COG1306, Uncharacterized conserved protein Function unknown 51892502 Common - hypothetical protein STH1364 67 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51891759 Common - hypothetical protein STH621 35 COG2339 COG2339, Predicted membrane protein Function unknown 51893168 Common - hypothetical protein STH2030 80 COG2949 SanA, Uncharacterized membrane protein Function unknown 51893936 Common - putative sugar transport protein STH2798 95 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 51892900 Common - thioredoxin reductase STH1762 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51893038 Common - hypothetical protein STH1900 51 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51894140 Common fliE flagellar hook-basal body protein STH3004 84 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 51894438 Common - UDP-N-acetylglucosamine enolpyruvyl transferase STH3304 209 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 51894267 Common - hypothetical protein STH3132 21 None None None 51892563 Common - diaminopimelate dehydrogenase STH1425 17 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 51892982 Common - geranylgeranyl pyrophosphate synthase STH1844 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 51891578 Nonpathogen - transposase-like protein STH440 1 None None None 51892115 Common - ABC transporter permease protein STH977 195 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 51894084 Common - translation-associated GTPase STH2948 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 51891790 Common - iron ABC transporter permease protein STH652 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 51893623 Common paaB phenylacetic acid degradation protein STH2485 20 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 51892371 Common - sugar ABC transporter permease STH1233 111 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 51891621 Common - coproporphyrinogen III oxidase STH483 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 51894363 Common - hypothetical protein STH3228 15 None None None 51891677 Common - magnesium transporter STH539 186 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 51894118 Common flgM anti-sigma factor FlgM STH2982 3 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 51892211 Common selB selenocysteine-specific elongation factor STH1073 249 COG3276 SelB, Selenocysteine-specific translation elongation factor Translation, ribosomal structure and biogenesis 51892323 Nonpathogen - hypothetical protein STH1185 1 None None None 51893987 Common - Phosphoribosylamine--glycine ligase STH2849 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 51893769 Common - GntR family transcriptional regulator STH2631 23 COG2188 PhnF, Transcriptional regulators Transcription 51893657 Common - hypothetical protein STH2519 2 None None None 51891687 Common - thioredoxin STH549 186 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 51893449 Common - transketolase N-terminal subunit STH2311 220 COG3959 COG3959, Transketolase, N-terminal subunit Carbohydrate transport and metabolism 51892346 Common - phospho-N-acetylmuramoyl-pentapeptide- transferase STH1208 208 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 51891312 Common - hypothetical protein STH174 19 COG3877 COG3877, Uncharacterized protein conserved in bacteria Function unknown 51893762 Nonpathogen - hypothetical protein STH2624 1 None None None 51892360 Common spoIIIG sporulation sigma factor SigG STH1222 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51894287 Common - cytochrome C oxidase mono-heme subunit STH3152 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 51892828 Common - putative amino acid amidohydrolase STH1690 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 51893477 Common - D-allose kinase STH2339 163 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 51893093 Common - ABC transporter permease protein STH1955 138 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891647 Common - hypothetical protein STH509 33 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 51891416 Common - hypothetical protein STH278 19 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 51891373 Common - phosphate ABC transporter phosphate-binding protein STH235 122 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 51893352 Nonpathogen - hypothetical protein STH2214 7 None None None 51891826 Nonpathogen - hypothetical protein STH688 1 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 51893589 Nonpathogen - hypothetical protein, glutamate-rich STH2451 1 None None None 51893391 Nonpathogen - hypothetical protein STH2253 9 None None None 51891369 Common - asparagine synthetase STH231 170 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 51892857 Common - hypothetical protein STH1719 148 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 51891573 Common - hypothetical protein STH435 42 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 51891797 Common dnaE DNA polymerase III DnaE STH659 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 51892965 Common - leucine dehydrogenase STH1827 152 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 51891847 Common - hypothetical protein STH709 111 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 51893758 Nonpathogen - hypothetical protein STH2620 1 None None None 51894335 Common spoIIE stage II sporulation protein E STH3200 15 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 51891707 Common - oligopeptide ABC transporter permease protein STH569 147 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893637 Common - hypothetical protein STH2499 41 COG3894 COG3894, Uncharacterized metal-binding protein General function prediction only 51891375 Common - phosphate ABC transporter permease protein STH237 212 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51893924 Common - homoserine O-acetyltransferase STH2786 129 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 51893412 Nonpathogen - hypothetical protein STH2274 1 None None None 51893716 Nonpathogen - hypothetical protein STH2578 1 None None None 51892621 Common - recombinase STH1483 223 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51892802 Common - hypothetical protein STH1664 81 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 51891357 Common - HtrA family serine protease STH219 220 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 51892546 Common - anthranilate synthetase component II STH1408 239 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 51891912 Nonpathogen - hypothetical protein STH774 1 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 51891702 Common - hypothetical protein STH564 66 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 51893841 Common - putative insertion sequence ATP-binding protein STH2703 35 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51892908 Common moxR2 methanol dehydrogenase regulatory protein STH1770 172 COG0714 COG0714, MoxR-like ATPases General function prediction only 51893555 Common - putative muramoyltetrapeptide carboxypeptidase STH2417 81 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 51893978 Common - glycine-rich RNA-binding protein STH2840 65 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 51892940 Common - hypothetical protein STH1802 158 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 51893840 Common - transposase subunit STH2702 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51892143 Common - translation initiation factor IF-1 STH1005 213 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 51893275 Common feoB ferrous ion uptake protein B STH2137 154 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 51891586 Common - hypothetical protein STH448 21 None None None 51893049 Nonpathogen - hypothetical protein STH1911 1 None None None 51891608 Common - spermidine/putrescine ABC transporter permease protein STH470 134 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 51892154 Nonpathogen - hypothetical protein STH1016 1 None None None 51893374 Common - pyridoxal phosphate biosynthetic protein variant STH2236 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 51893088 Common - chorismate synthase STH1950 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 51892817 Common - GTP-binding protein STH1679 234 COG1160 COG1160, Predicted GTPases General function prediction only 51891147 Common - phosphoglycerate dehydrogenase STH9 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 51891876 Nonpathogen - hypothetical protein STH738 1 None None None 51892038 Common - Na+-transporting NADH-quinone reductase subunit 5 STH900 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 51892131 Common - glycolate oxidase subunit STH993 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 51893522 Nonpathogen - hypothetical protein STH2384 1 None None None 51891240 Common - putative peptidase STH102 38 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51892830 Common - cytochrome D ubiquinol oxidase subunit I STH1692 167 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 51894275 Common - protein translation elongation factor G STH3140 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 51893866 Common - two-component response regulator STH2728 210 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892241 Common - putative polysaccharide pyruvyl transferase STH1103 49 COG2327 WcaK, Uncharacterized conserved protein Function unknown 51892045 Common - RNA polymerase factor sigma C STH907 168 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892932 Common - group II intron-encoding maturase STH1794 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893722 Common - 3-hydroxybutyryl-CoA dehydrogenase STH2584 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 51893060 Common - glycine cleavage system protein T STH1922 180 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 51891273 Common - ComE operon protein 4 STH135 153 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 51893349 Common - hypothetical protein STH2211 22 COG1470 COG1470, Predicted membrane protein Function unknown 51893824 Common - branched-chain amino acid aminotransferase STH2686 213 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 51893748 Common - hypothetical protein STH2610 52 COG0640 ArsR, Predicted transcriptional regulators Transcription 51892064 Common - 2-cys peroxiredoxin STH926 231 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51893091 Common - hypothetical protein STH1953 43 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 51893902 Nonpathogen - hypothetical protein STH2764 1 None None None 51891813 Nonpathogen - hypothetical protein STH675 1 None None None 51892934 Nonpathogen - hypothetical protein STH1796 1 None None None 51892238 Common - hypothetical protein STH1100 12 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 51894381 Common - putative 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase STH3246 193 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 51891998 Common - hypothetical protein STH860 2 None None None 51892357 Common ftsZ cell division protein FtsZ STH1219 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 51894064 Common - ribosomal protein S1-like RNA-binding domain STH2928 202 COG2183 Tex, Transcriptional accessory protein Transcription 51892925 Common - spore maturation protein A STH1787 39 COG2715 SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. General function prediction only 51893628 Common - glycerate kinase STH2490 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 51891993 Common - ABC transporter permease protein STH855 8 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51891321 Nonpathogen - hypothetical protein STH183 4 COG2191 COG2191, Formylmethanofuran dehydrogenase subunit E Energy production and conversion 51893205 Nonpathogen - hypothetical protein STH2067 1 None None None 51892124 Common - two-component sensor histidine kinase STH986 117 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 51892376 Common - hypothetical protein STH1238 151 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 51891981 Common - two-component sensor histidine kinase STH843 223 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51892073 Common - putative beta-lactamase STH935 18 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51894348 Common - two-component sensor histidine kinase STH3213 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51892551 Common - phosphoribosyl anthranilate isomerase STH1413 189 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 51893246 Common - ABC transporter ATP-binding protein STH2108 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51892029 Common - hypothetical protein STH891 83 COG0622 COG0622, Predicted phosphoesterase General function prediction only 51892983 Common - exodeoxyribonuclease VII small subunit STH1845 140 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 51891715 Common - putative 3-oxoacyl-(acyl-carrier protein) reductase STH577 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51893669 Nonpathogen - hypothetical protein STH2531 1 None None None 51891384 Nonpathogen - hypothetical protein STH246 1 None None None 51891461 Nonpathogen - hypothetical protein STH323 1 None None None 51892019 Common - acetyl-coenzyme A synthetase STH881 217 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 51891569 Common rpmA 50S ribosomal protein L27 STH431 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 51892484 Common - group II intron-encoding maturase STH1346 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893937 Common - putative oxidoreductase STH2799 94 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 51891289 Common - excinuclease ABC subunit B STH151 232 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 51892474 Nonpathogen - hypothetical protein, glycine-rich STH1336 1 None None None 51892183 Common - NifU-like nitrogen fixation protein STH1045 126 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 51892676 Common cheC chemotaxis signal transduction protein STH1538 37 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 51892297 Common ruvC Holliday junction endodeoxyribonuclease RuvC STH1159 198 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 51891888 Common - two-component response regulator, probably involved in phosphate sensing STH750 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51894149 Common - electron transfer flavoprotein alpha subunit STH3013 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 51893169 Nonpathogen - hypothetical protein STH2031 1 None None None 51892547 Common - anthranilate phosphoribosyltransferase STH1409 218 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 51891800 Nonpathogen - transposase-like protein STH662 1 None None None 51894245 Common - group II intron-encoding maturase STH3110 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51894180 Common - ABC-type cobalt transport system ATPase component STH3045 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 51891535 Common - putative integral membrane protein STH397 67 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 51891225 Common - ATP synthase B subunit STH87 93 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 51892954 Common - ABC transporter ATP-binding protein STH1816 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51892847 Common - hypothetical protein STH1709 20 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 51892727 Common nuoD1 NADH dehydrogenase I subunit D STH1589 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 51893120 Common - spore peptidoglycan hydrolase STH1982 82 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 51893382 Common - transposase STH2244 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891831 Common - methyl-accepting chemotaxis protein STH693 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51891839 Common - sigma-54-dependent transcriptional regulator STH701 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51891855 Nonpathogen - hypothetical protein, glycine/proline-rich STH717 1 COG4907 COG4907, Predicted membrane protein Function unknown 51894176 Common - 30S ribosomal protein S9 STH3040 248 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 51894025 Common - hypothetical protein STH2889 174 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51891177 Common rpoE RNA polymerase delta subunit STH39 14 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 51893174 Common - cysteine desulfurase STH2036 236 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 51892307 Nonpathogen - transcriptional regulator STH1169 2 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892279 Common - hypothetical protein STH1141 31 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 51892639 Common - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase STH1501 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 51893370 Common - phosphoglycerate dehydrogenase, N-terminal domain STH2232 161 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 51892439 Nonpathogen - hypothetical protein STH1301 3 COG2378 COG2378, Predicted transcriptional regulator Transcription 51893800 Common - putative poly-gamma-glutamate biosynthesis enzyme STH2662 72 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 51892712 Common - hypothetical protein STH1574 37 None None None 51894352 Common - ABC transporter ATP-binding protein STH3217 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51893591 Common gerXB spore germination protein STH2453 15 None None None 51893070 Common - cobyric acid synthase STH1932 150 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 51892820 Common - hypothetical protein STH1682 2 COG1971 COG1971, Predicted membrane protein Function unknown 51893519 Nonpathogen - hypothetical protein STH2381 1 None None None 51893343 Common - hypothetical protein STH2205 32 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 51894311 Common - succinate dehydrogenase cytochrome b558 subunit STH3176 19 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 51891710 Common - oligopeptide ABC transporter permease protein STH572 195 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891330 Common - hypothetical protein STH192 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 51892794 Common - Na+/H+ antiporter subunit STH1656 47 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 51894467 Common - ParA, ParA family ATPase STH3333 232 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51893641 Common - metalloendopeptidase-related protein STH2503 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51893224 Common - transposase STH2086 45 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891643 Common dnaJ heat shock protein, DnaJ STH505 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 51891261 Common - 30S ribosomal protein S30AE family STH123 131 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 51893158 Nonpathogen - spore coat protein F STH2020 1 COG5577 COG5577, Spore coat protein Cell envelope biogenesis, outer membrane 51891818 Common - arsenic transporting ATPase STH680 80 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 51892895 Common mutS DNA mismatch repair protein STH1757 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 51892445 Common - putative ATP-dependent DNA helicase STH1307 229 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51891231 Common - hypothetical protein STH93 63 COG1556 COG1556, Uncharacterized conserved protein Function unknown 51893339 Nonpathogen - hypothetical protein STH2201 1 None None None 51894378 Common - threonine dehydratase STH3243 218 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 51892780 Common gerKA2 spore germination protein KA STH1642 15 None None None 51892100 Nonpathogen - hypothetical protein STH962 1 None None None 51892394 Common - pyrimidine regulatory protein PyrR STH1256 115 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 51892906 Nonpathogen - hypothetical protein STH1768 1 None None None 51893239 Common - hypothetical protein STH2101 21 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51892717 Common - putative propionyl-CoA carboxylase beta subunit STH1579 164 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 51893182 Nonpathogen - hypothetical protein STH2044 1 None None None 51891935 Common - hypothetical protein STH797 3 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 51891152 Common - hypothetical protein STH14 68 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 51892602 Common - hypothetical protein STH1464 27 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 51893459 Common - acetyl-coenzyme A synthetase STH2321 217 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 51893238 Common - hypothetical protein STH2100 44 COG3336 COG3336, Predicted membrane protein Function unknown 51892318 Common - signal peptidase, type I STH1180 26 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 51892762 Common - glycosyl transferase STH1624 230 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51893951 Common metS2 methionyl-tRNA synthetase STH2813 131 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892578 Common - hypothetical protein STH1440 25 None None None 51891421 Nonpathogen - hypothetical protein STH283 2 None None None 51893510 Nonpathogen - hypothetical protein STH2372 1 None None None 51891144 Common gyrB DNA gyrase B subunit STH6 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 51893212 Common - ABC transporter permease protein STH2074 12 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 51893142 Nonpathogen - hypothetical protein STH2004 4 COG0316 IscA, Uncharacterized conserved protein Function unknown 51893601 Common - acyl-CoA dehydrogenase, short-chain specific STH2463 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 51892336 Common - ABC transporter permease protein STH1198 26 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 51892626 Nonpathogen - hypothetical protein STH1488 1 None None None 51893063 Common - histidinol-phosphate aminotransferase STH1925 221 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 51891316 Nonpathogen - hypothetical protein, glycine-rich STH178 1 COG4371 COG4371, Predicted membrane protein Function unknown 51891185 Nonpathogen - hypothetical protein STH47 1 None None None 51893160 Common - hypothetical protein STH2022 7 None None None 51891501 Common - methyl-accepting chemotaxis protein STH363 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51893540 Common - hypothetical protein STH2402 132 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 51892414 Common - PTS system mannose-specific IIB component STH1276 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 51891400 Nonpathogen - hypothetical protein STH262 1 None None None 51892827 Common - peptidase STH1689 123 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 51891437 Common - oligopeptide ABC transporter permease protein STH299 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51892105 Common - hypothetical protein STH967 24 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51891407 Nonpathogen - hypothetical protein STH269 1 None None None 51894164 Nonpathogen - hypothetical protein STH3028 3 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 51893531 Nonpathogen - hypothetical protein STH2393 1 None None None 51893944 Nonpathogen - hypothetical protein STH2806 1 None None None 51893702 Common - hypothetical protein STH2564 35 COG4243 COG4243, Predicted membrane protein Function unknown 51893914 Common nuoA2 NADH dehydrogenase I subunit A STH2776 144 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 51893083 Nonpathogen - hypothetical protein, glycine-rich STH1945 1 None None None 51891683 Nonpathogen - hypothetical protein STH545 1 None None None 51894309 Common sdhB succinate dehydrogenase iron-sulfur subunit STH3174 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 51892209 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase STH1071 108 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 51893496 Common - ABC transporter ATP-binding protein STH2358 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51894157 Nonpathogen - hypothetical protein STH3021 1 None None None 51893219 Common - molybdopterin oxidoreductase molybdopterin-binding subunit STH2081 157 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51893667 Common - hypothetical protein STH2529 3 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 51893305 Nonpathogen - hypothetical protein STH2167 1 None None None 51894320 Common - nicotinate-mononucleotide pyrophosphorylase STH3185 203 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 51892811 Common - hypothetical protein STH1673 28 COG3875 COG3875, Uncharacterized conserved protein Function unknown 51893882 Common - oligopeptide ABC transporter permease protein STH2744 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893123 Common - anaerobic glycerol-3-phosphate dehydrogenase subunit B STH1985 22 COG3075 GlpB, Anaerobic glycerol-3-phosphate dehydrogenase Amino acid transport and metabolism 51891738 Common - phosphoesterase, puative STH600 90 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 51891450 Common - hypothetical protein STH312 52 COG3649 COG3649, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 51891203 Nonpathogen - hypothetical protein STH65 8 None None None 51892389 Common agaF PTS system N-acetylgalactosamine-specific IIA component STH1251 80 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 51894211 Common rpsJ 30S ribosomal protein S10 STH3076 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 51892216 Common - hypothetical protein STH1078 60 COG1683 COG1683, Uncharacterized conserved protein Function unknown 51892253 Common mutS2 DNA mismatch repair protein STH1115 206 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 51892877 Common - hypothetical protein STH1739 2 None None None 51893660 Common - hypothetical protein STH2522 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 51891453 Common - transposase STH315 45 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891878 Nonpathogen - hypothetical protein STH740 2 None None None 51892878 Nonpathogen - hypothetical protein STH1740 1 None None None 51892554 Nonpathogen - hypothetical protein STH1416 1 None None None 51892306 Common - hypothetical protein STH1168 129 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 51891219 Common - undecaprenyl-phosphate N-acetylglucosaminyltransferase STH81 186 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 51894388 Common abrB sporulation-related transcriptional regulator AbrB STH3253 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 51891238 Nonpathogen - hypothetical protein STH100 1 None None None 51893876 Common - hypothetical protein STH2738 79 COG1279 COG1279, Lysine efflux permease General function prediction only 51891939 Common - branched-chain amino acid ABC transporter permease protein STH801 150 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51894059 Common - ribosomal-protein-alanine acetyltransferase STH2923 205 COG0456 RimI, Acetyltransferases General function prediction only 51893312 Common - ATP-dependent deoxyribonuclease subunit B STH2174 24 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 51893889 Common - ABC transporter permease protein STH2751 229 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 51892604 Common rpsP 30S ribosomal protein S16 STH1466 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 51893108 Common - ABC transporter ATP-binding protein STH1970 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51892492 Common - putative GTPase STH1354 163 COG1162 COG1162, Predicted GTPases General function prediction only 51893157 Nonpathogen - hypothetical protein STH2019 1 None None None 51892266 Nonpathogen - transposase-like protein STH1128 1 None None None 51893690 Common - thiol-disulfide isomerase and thioredoxins STH2552 61 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 51894216 Common - ribosomal protein L7AE family STH3081 20 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 51892752 Common - branched chain amino acid ABC transporter substrate-binding protein STH1614 152 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51891214 Common - low molecular weight protein-tyrosine-phosphatase STH76 82 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 51894293 Common - putative transcriptional regulator STH3158 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 51892196 Nonpathogen - hypothetical protein STH1058 1 None None None 51893103 Common - hypothetical protein STH1965 8 None None None 51894371 Common - hypothetical protein STH3236 11 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 51892239 Common - glycosyl transferase STH1101 213 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51891519 Common - signal peptidase I STH381 204 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 51892611 Common - hypothetical protein STH1473 162 COG1161 COG1161, Predicted GTPases General function prediction only 51891347 Nonpathogen - hypothetical protein STH209 1 None None None 51892614 Common - hypothetical protein STH1476 188 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 161899035 Common trmE tRNA modification GTPase TrmE STH3336 218 COG0486 ThdF, Predicted GTPase General function prediction only 51893689 Common - hypothetical protein STH2551 16 COG4347 COG4347, Predicted membrane protein Function unknown 51894338 Common - hypothetical protein STH3203 32 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 51893760 Common - amino acid ABC transporter permease protein STH2622 178 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51893659 Common - hypothetical protein STH2521 20 COG1433 COG1433, Uncharacterized conserved protein Function unknown 51891196 Common - putative middle wall protein precursor STH58 49 None None None 51892893 Common - group II intron-encoding maturase variant STH1755 92 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51892402 Common - transposase-like protein STH1264 7 None None None 51891750 Common - putative cobalamin adenosyltransferase STH612 131 COG2096 COG2096, Uncharacterized conserved protein Function unknown 51891786 Common - ABC transporter ATP-binding protein STH648 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51893704 Nonpathogen - hypothetical protein STH2566 1 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 51894065 Nonpathogen - hypothetical protein STH2929 1 None None None 51892731 Common nuoH1 NADH dehydrogenase I subunit H STH1593 188 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 51891757 Common - long-chain fatty-acid-CoA ligase STH619 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51893972 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase STH2834 212 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 51893787 Nonpathogen - hypothetical protein STH2649 1 None None None 51893550 Nonpathogen - hypothetical protein STH2412 1 None None None 51892311 Common - MarR family transcriptional regulator STH1173 90 COG1846 MarR, Transcriptional regulators Transcription 51891918 Common - putative lipopolysaccharide N-acetylglucosaminyltransferase STH780 205 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51892494 Common cheW1 chemotaxis signal transduction protein STH1356 129 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 51892809 Common - group II intron-encoding maturase STH1671 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51891845 Common - branched-chain amino acid ABC transporter substrate-binding protein STH707 94 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51894126 Common fliQ flagellar biosynthetic protein STH2990 93 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 51891359 Common - putative ferredoxin STH221 57 COG1146 COG1146, Ferredoxin Energy production and conversion 51893650 Nonpathogen - hypothetical protein STH2512 1 None None None 51891296 Common - hypothetical protein STH158 16 COG4732 COG4732, Predicted membrane protein Function unknown 51892344 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate ligase STH1206 209 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 51892922 Nonpathogen - hypothetical protein STH1784 1 None None None 51892404 Nonpathogen - hypothetical protein STH1266 2 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 51892112 Common - hypothetical protein STH974 3 None None None 51892973 Common recN DNA repair and genetic recombination protein STH1835 199 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 51893843 Common - transposase STH2705 80 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892735 Common nuoL1 NADH dehydrogenase I subunit L STH1597 202 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 51891692 Common - putative phosphotriesterase STH554 35 COG1735 Php, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 51894191 Common rplO 50S ribosomal protein L15 STH3056 223 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 51893250 Nonpathogen - hypothetical protein STH2112 1 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51893322 Common - MerR family transcriptional regulator STH2184 112 COG0789 SoxR, Predicted transcriptional regulators Transcription 51893023 Common dnaE2 DNA polymerase III alpha subunit STH1885 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 51893047 Common - type I restriction-modification system specificity determinant protein STH1909 102 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 51891777 Nonpathogen - hypothetical protein STH639 1 None None None 51892004 Common - putative starvation induced DNA binding protein STH866 29 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 51892844 Nonpathogen - hypothetical protein STH1706 1 None None None 51893411 Nonpathogen - hypothetical protein STH2273 1 None None None 51892537 Nonpathogen - hypothetical protein STH1399 2 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 51893398 Nonpathogen - hypothetical protein STH2260 5 None None None 51893277 Common - two-component sensor histidine kinase STH2139 157 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51893567 Nonpathogen - hypothetical protein STH2429 1 None None None 51892432 Common - hypothetical protein STH1294 4 None None None 51891351 Common - enoyl-CoA hydratase/isomerase family protein STH213 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 51892454 Common - 2-oxoglutarate ferredoxin oxidoreductase subunit beta STH1316 113 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 51891799 Nonpathogen - hypothetical protein STH661 1 None None None 51892911 Common - hypothetical protein STH1773 116 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 51891708 Common - oligopeptide ABC transporter permease protein STH570 213 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51891816 Common - ABC transporter permease protein STH678 6 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51893270 Common - hypothetical protein STH2132 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51893503 Common - hypothetical protein STH2365 6 None None None 51892364 Nonpathogen - hypothetical protein STH1226 7 None None None 51894474 Common - ribonuclease P protein component STH3340 89 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 51893257 Common - hypothetical protein STH2119 34 COG2364 COG2364, Predicted membrane protein Function unknown 51891727 Common - malate synthase STH589 73 COG2225 AceB, Malate synthase Energy production and conversion 51893195 Common - group II intron-encoding maturase STH2057 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51894459 Common - hypothetical protein STH3325 14 None None None 51893286 Nonpathogen - hypothetical protein STH2148 1 COG3832 COG3832, Uncharacterized conserved protein Function unknown 51894364 Common - hypothetical protein STH3229 36 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 51891397 Common asnB asparagine synthetase B STH259 191 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 51892596 Common - MerR family transcriptional regulator STH1458 126 COG0789 SoxR, Predicted transcriptional regulators Transcription 51893928 Common - glutamate-1-semialdehyde aminotransferase STH2790 236 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 51894286 Nonpathogen - hypothetical protein STH3151 1 None None None 51893016 Common - hypothetical protein STH1878 18 COG1306 COG1306, Uncharacterized conserved protein Function unknown 51891493 Common - hypothetical protein STH355 160 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51891583 Nonpathogen - hypothetical protein STH445 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 51893818 Common - hypothetical protein STH2680 137 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 51893359 Nonpathogen - hypothetical protein STH2221 17 None None None 51893476 Common - ribulose-5-phosphate 3-epimerase STH2338 215 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 51893926 Nonpathogen - hypothetical protein STH2788 1 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 51891720 Nonpathogen - hypothetical protein STH582 1 COG0456 RimI, Acetyltransferases General function prediction only 51894146 Common - acetyl-CoA dehydrogenase STH3010 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 51893457 Common - hypothetical protein STH2319 60 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 51892218 Common - endo-1,4-beta-glucanase STH1080 86 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 51893967 Nonpathogen - hypothetical protein STH2829 15 COG1355 COG1355, Predicted dioxygenase General function prediction only 51891530 Common - hypothetical protein STH392 80 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 51894408 Common - putative membrane efflux protein STH3274 23 None None None 51891612 Nonpathogen - hypothetical protein STH474 1 None None None 51891946 Common - hypothetical protein STH808 214 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 51892949 Common spoVAE stage V sporulation protein AE STH1811 7 None None None 51891630 Common - two-component response regulator STH492 179 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51893198 Nonpathogen - glutaredoxin-related protein STH2060 8 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 51891223 Common - ATP synthase A subunit STH85 194 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 51893587 Common - hypothetical protein STH2449 64 COG3394 COG3394, Uncharacterized protein conserved in bacteria Function unknown 51893835 Common - putative oxidoreductase STH2697 185 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 51893355 Nonpathogen - hypothetical protein STH2217 1 None None None 51893756 Common - heme O oxygenase STH2618 15 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 51892417 Common - glucosamine--fructose-6-phosphate aminotransferase STH1279 234 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 51891537 Nonpathogen - septum site-determining protein STH399 1 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 149797294 Common - tRNA-pseudouridine synthase A STH3042 233 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 51893444 Common - hypothetical protein STH2306 27 COG4717 COG4717, Uncharacterized conserved protein Function unknown 51891792 Common - hypothetical protein STH654 27 COG2014 COG2014, Uncharacterized conserved protein Function unknown 51892967 Common - butyrate kinase STH1829 81 COG3426 COG3426, Butyrate kinase Energy production and conversion 51892772 Common - transcriptional regulator STH1634 123 COG2606 EbsC, Uncharacterized conserved protein Function unknown 51893636 Common - putative beta-N-acetylglucosaminidase STH2498 176 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 51892469 Nonpathogen - hypothetical protein STH1331 1 None None None 51891764 Common - hypothetical protein STH626 8 COG3610 COG3610, Uncharacterized conserved protein Function unknown 51892839 Nonpathogen - hypothetical protein STH1701 1 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 51893780 Common - fumarate hydratase subunit B STH2642 148 COG1838 FumA, Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain Energy production and conversion 51893402 Nonpathogen - hypothetical protein STH2264 6 None None None 51894391 Common - DNA polymerase III delta' subunit STH3256 225 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 51891870 Common - two-component sensor histidine kinase STH732 220 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 51892957 Nonpathogen - hypothetical protein STH1819 1 None None None 51891601 Common moxR3 methanol dehydrogenase regulatory protein STH463 173 COG0714 COG0714, MoxR-like ATPases General function prediction only 51893630 Common - putative S-layer associated protein STH2492 72 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 51894115 Common flgL flagellar-hook associated protein STH2979 77 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 51891414 Common - transposase STH276 82 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891779 Common - cysteine desulfurase STH641 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 51893676 Common - transcriptional regulator STH2538 121 COG1414 IclR, Transcriptional regulator Transcription 51892729 Common nuoF1 NADH dehydrogenase I subunit F STH1591 170 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 51891650 Common - D-alanine--D-alanine ligase STH512 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 51893336 Common - putative phospholipase STH2198 127 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 51894295 Common - hypothetical protein STH3160 101 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 51893163 Common - HtrA family serine protease STH2025 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 51892808 Common - 30S ribosomal protein S1 STH1670 236 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 51893015 Common - hypothetical protein STH1877 10 COG4502 COG4502, Uncharacterized protein conserved in bacteria Function unknown 51893617 Nonpathogen - hypothetical protein STH2479 1 None None None 51891772 Common - alpha/beta hydrolase STH634 3 COG2267 PldB, Lysophospholipase Lipid metabolism 51894155 Common - ornithine carbamoyltransferase STH3019 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 51894455 Common - 30S ribosomal protein S6 STH3321 199 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 51891470 Nonpathogen - hypothetical protein STH332 1 None None None 51894095 Common - hypothetical protein STH2959 14 None None None 51891559 Common - S-adenosylmethionine decarboxylase proenzyme STH421 72 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 51893571 Common - hypothetical protein STH2433 60 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 51893075 Common - N-acetylglucosamine-6-phosphate deacetylase STH1937 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 51892527 Common - hypothetical protein STH1389 12 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 51893469 Common dmsB1 anaerobic dimethyl sulfoxide reductase subunit B STH2331 160 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51893181 Common - RNA polymerase ECF-type sigma factor STH2043 169 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51891641 Common - heat-shock protein STH503 228 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 51892133 Nonpathogen - hypothetical protein STH995 1 COG5504 COG5504, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 51892996 Common spoIIIAE stage III sporulation protein AE STH1858 15 None None None 51893384 Common - hypothetical protein STH2246 38 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893462 Nonpathogen - hypothetical protein STH2324 1 None None None 51893137 Common - putative acetyltransferase STH1999 91 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51893426 Nonpathogen - transposase-like protein STH2288 1 None None None 51893111 Common - putative acetyltransferase STH1973 109 COG2153 ElaA, Predicted acyltransferase General function prediction only 51891362 Common - 2-oxoglutarate oxidoreductase gamma subunit STH224 74 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 51894101 Common - thioredoxin peroxidase STH2965 99 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51893055 Common - serine hydroxymethyltransferase STH1917 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 51892513 Nonpathogen - hypothetical protein STH1375 5 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51891908 Common - LacI family transcriptional repressor STH770 128 COG1609 PurR, Transcriptional regulators Transcription 51893264 Common - phosphoglycerate mutase STH2126 154 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 51892575 Common - putative cell wall-binding protein STH1437 25 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 51892146 Common pgi glucose-6-phosphate isomerase STH1008 94 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 51891924 Common - hypothetical protein STH786 116 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 51893271 Common - hypothetical protein STH2133 135 COG1739 COG1739, Uncharacterized conserved protein Function unknown 51893296 Common - cobalt ABC transporter ATP-binding protein STH2158 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 51893360 Nonpathogen - hypothetical protein STH2222 20 None None None 51894086 Common - hypothetical protein STH2950 119 COG2353 COG2353, Uncharacterized conserved protein Function unknown 51893501 Common - cystathionine gamma-synthase STH2363 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 51891156 Common - arginase-family protein STH18 141 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 51892942 Common - metal-dependent peptidase STH1804 78 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 51892273 Common - secreted peptidase STH1135 76 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51893367 Common - hypothetical protein STH2229 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 51893606 Nonpathogen - hypothetical protein STH2468 1 None None None 51892645 Common - ABC transporter ATP-binding protein STH1507 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 51893372 Nonpathogen - hypothetical protein STH2234 3 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51893290 Common - hypothetical protein STH2152 128 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 51892744 Nonpathogen - hypothetical protein STH1606 1 None None None 51891251 Common rpsD 30S ribosomal protein S4 STH113 242 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 51892034 Common - Na+-transporting NADH-quinone reductase subunit 1 STH896 121 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 51892682 Common - dihydrodipicolinate reductase STH1544 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 51891866 Common - hypothetical protein STH728 34 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51893909 Common nuoJ2 NADH dehydrogenase I subunit J STH2771 160 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 51892916 Nonpathogen - hypothetical protein STH1778 7 None None None 51893855 Nonpathogen - hypothetical protein STH2717 1 None None None 51892694 Common - Zn-dependent hydrolase beta-lactamase superfamily STH1556 161 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 51891382 Common - triosephosphate isomerase STH244 217 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 51894189 Common - Adenylate kinase STH3054 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 51894205 Common rplV 50S ribosomal protein L22 STH3070 217 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 51891270 Common - L-cysteine/cystine lyase STH132 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 51891856 Common - bacillopeptidase-like protein STH718 147 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 51892665 Common - ribosomal small subunit pseudouridine synthase A STH1527 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 51891669 Common - hypothetical protein STH531 204 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 51891279 Common - cell wall-binding protein STH141 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51891969 Common - putative transcriptional regulator STH831 48 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 51893438 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase STH2300 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 51893773 Common - two-component response regulator STH2635 173 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892508 Common - putative UDP-glucose 4-epimerase STH1370 234 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51892264 Common - putative molybdopterin biosynthesis protein STH1126 214 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 51891486 Common - PTS system enzyme IIABC component STH348 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 51892750 Common - molybdopterin precursor biosynthesis protein STH1612 171 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 51891824 Common - hypothetical protein STH686 116 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 51894167 Common - RNA polymerase ECF-type sigma factor STH3031 168 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892192 Common - putative RNA nucleotidyltransferase STH1054 206 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 51893895 Nonpathogen - hypothetical protein STH2757 1 None None None 51891929 Nonpathogen - hypothetical protein STH791 2 None None None 51893749 Common - hypothetical protein STH2611 26 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 51891540 Nonpathogen - hypothetical protein STH402 1 None None None 51893431 Common - ATP-dependent helicase STH2293 158 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 51892632 Common - ribosome recycling factor STH1494 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 51893767 Common - glycine betaine/carnitine/choline ABC transporter permease protein STH2629 170 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 51891576 Common - sigma-54-dependent transcriptional regulator STH438 178 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51892095 Common - putative reductase STH957 98 COG0431 COG0431, Predicted flavoprotein General function prediction only 51894342 Common - putative iron hydrogenase small subunit gamma STH3207 156 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 51891984 Nonpathogen - hypothetical protein STH846 6 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 51891953 Common - methylthioadenosine phosphorylase STH815 140 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 51893981 Nonpathogen - hypothetical protein STH2843 1 None None None 51893697 Common - group II intron-encoding maturase STH2559 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51892033 Nonpathogen - hypothetical protein STH895 1 COG3086 RseC, Positive regulator of sigma E activity Signal transduction mechanisms 51892988 Nonpathogen - hypothetical protein STH1850 1 COG5547 COG5547, Small integral membrane protein Function unknown 51894420 Common - hypothetical protein STH3286 25 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 51894132 Common flgD flagellar hook assembly protein STH2996 67 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 51891477 Common - ribonulease R STH339 192 COG0557 VacB, Exoribonuclease R Transcription 51892797 Common - Na+/H+ antiporter subunit STH1659 49 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 51892532 Nonpathogen - hypothetical protein STH1394 2 None None None 51894333 Common ftsH3 cell division protein STH3198 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 51893203 Common - hypothetical protein STH2065 12 None None None 51893598 Common - MutT/nudix family protein STH2460 72 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51894147 Common - acetyl-CoA acyltransferase STH3011 185 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 51893176 Common - hypothetical protein STH2038 185 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 51892855 Nonpathogen - hypothetical protein, glycine-rich STH1717 1 None None None 51892309 Common - hypothetical protein STH1171 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 51893494 Common - hypothetical protein STH2356 21 None None None 51893816 Nonpathogen - hypothetical protein, alanine-rich STH2678 1 None None None 51892075 Common - hypothetical protein STH937 16 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 51892862 Common - multidrug efflux protein STH1724 12 None None None 51892956 Nonpathogen - hypothetical protein STH1818 1 None None None 51891560 Common - putative protease STH422 44 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 51893341 Nonpathogen - hypothetical protein, alanine-rich STH2203 1 None None None 51893514 Common - hypothetical protein STH2376 37 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 51891175 Common - lysine 5,6-aminomutase alpha subunit STH37 17 None None None 51892430 Nonpathogen - transposase-like protein STH1292 1 None None None 51892046 Nonpathogen - hypothetical protein, alanine-rich STH908 1 None None None 51891853 Nonpathogen - hypothetical protein STH715 1 None None None 51892380 Common - signal peptidase II STH1242 118 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51893129 Common spoVD stage V sporulation protein D STH1991 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51894062 Common - putative ATPase or kinase STH2926 201 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 51892651 Common - putative lipoate-protein ligase STH1513 5 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 51892290 Common - RNA polymerase ECF-type sigma factor STH1152 41 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892206 Common - putative amidase STH1068 99 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 51894351 Common - hypothetical protein STH3216 5 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 51891950 Nonpathogen - hypothetical protein STH812 1 None None None 51893396 Nonpathogen - hypothetical protein STH2258 1 None None None 51892141 Common - putative 3-hydroxyacyl-CoA dehydrogenase STH1003 51 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 51894277 Common - ferredoxin STH3142 158 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 51891807 Common - hypothetical protein STH669 29 None None None 51893334 Common - branched-chain amino acid ABC transporter permease protein STH2196 142 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51891201 Common - putative acyl-CoA hydrolase STH63 20 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 51891420 Nonpathogen - hypothetical protein STH282 2 None None None 51891886 Common - phosphate ABC transporter permease protein STH748 222 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51893077 Common - PTS system IIB component STH1939 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 51892437 Common - transposase subunit STH1299 97 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51893838 Nonpathogen - O-antigen biosynthesis-related protein STH2700 9 None None None 51894461 Common - putative peptidase STH3327 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51892226 Common - hypothetical protein STH1088 8 COG5373 COG5373, Predicted membrane protein Function unknown 51892585 Common - fatty acid/phospholipid synthesis protein STH1447 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 51891301 Common - hypothetical protein STH163 28 COG4632 EpsL, Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase Carbohydrate transport and metabolism 51894250 Common - rRNA methyltransferase STH3115 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 51893781 Common - putative (2R)-phospho-3-sulfolactate synthase STH2643 22 COG1809 COG1809, Uncharacterized conserved protein Function unknown 51893852 Nonpathogen - putative transposase STH2714 1 None None None 51892670 Common - processing protease STH1532 201 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 51891623 Nonpathogen - hypothetical protein STH485 1 COG3025 COG3025, Uncharacterized conserved protein Function unknown 51891781 Common - cytochrome D ubiquinol oxidase subunit II STH643 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 51892884 Common - host factor-1 protein STH1746 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 51892052 Common - ATP-dependent Clp protease proteolytic subunit STH914 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51893328 Common - acyl-CoA synthetase STH2190 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51894006 Common grdE glycine reductase proprotein STH2870 8 None None None 51892819 Common - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase STH1681 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 51893486 Common - GntR family transcriptional regulator STH2348 134 COG2188 PhnF, Transcriptional regulators Transcription 51892243 Common pheSA phenylalanyl-tRNA synthetase alpha subunit STH1105 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 51893549 Common - UDP-glucose:sterol glucosyltransferase STH2411 52 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 51893184 Common - two-component response regulator variant STH2046 89 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 51891815 Common - ABC transporter ATP-binding protein STH677 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51893210 Common - AraC family transcriptional regulator STH2072 95 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 51894018 Common - acetylglutamate kinase STH2882 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 51892250 Common - ABC transporter ATP-binding protein STH1112 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51891788 Common - two-component system sensor kinase STH650 90 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51893251 Common - hypothetical protein STH2113 40 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51892367 Common - hypothetical protein STH1229 58 COG0762 COG0762, Predicted integral membrane protein Function unknown 51892138 Common - cystathionine gamma-lyase STH1000 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 51892086 Common - methyl-accepting chemotaxis protein STH948 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51892661 Common - ribosome-binding factor A STH1523 198 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 51894270 Common - hypothetical protein STH3135 20 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 51893720 Nonpathogen - hypothetical protein STH2582 2 None None None 161899037 Common - ketol-acid reductoisomerase STH2688 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 51893634 Common - ATP-dependent DNA helicase STH2496 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51892255 Nonpathogen - putative oxidoreductase STH1117 8 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 51894234 Common - formate dehydrogenase alpha subunit STH3099 185 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51892776 Common - cell division protein STH1638 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 51891523 Common - tungstate ABC transporter substrate-binding protein STH385 62 COG2998 TupB, ABC-type tungstate transport system, permease component Coenzyme metabolism 51893681 Common - malate dehydrogenase STH2543 202 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 51891463 Nonpathogen - hypothetical protein STH325 1 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 51893584 Nonpathogen - hypothetical protein STH2446 2 None None None 51892936 Common - hypothetical protein STH1798 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 51893802 Common - ABC transporter ATP-binding protein STH2664 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 51891646 Common - hypothetical protein STH508 173 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 51893044 Nonpathogen - hypothetical protein STH1906 1 None None None 51893746 Common - hypothetical protein STH2608 38 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 51891324 Common - hypothetical protein STH186 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 51892161 Common - two-component response regulator STH1023 193 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892515 Nonpathogen - heavy metal-transporting ATPase STH1377 1 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 51891386 Common - phosphoglyceromutase STH248 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 51891275 Nonpathogen - hypothetical protein STH137 5 None None None 51891242 Common - cell shape determining protein STH104 196 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 51892961 Common spoIIM stage II sporulation protein M STH1823 2 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 51894257 Common - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase STH3122 187 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 51891379 Common - LysR family transcriptional regulator STH241 193 COG0583 LysR, Transcriptional regulator Transcription 51892020 Common - cell wall degradation protein STH882 15 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 51893853 Common - UDP-glucose 4-epimerase STH2715 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51891331 Common - hypothetical protein STH193 16 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 51891736 Common - hypothetical protein STH598 92 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 51893643 Common - two-component sensor histidine kinase STH2505 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51893920 Common - O-acetylhomoserine aminocarboxypropyltransferase STH2782 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 51893821 Common - putative aldolase STH2683 170 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 51892359 Common spoIIGB sporulation sigma factor SigE STH1221 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51892187 Nonpathogen - hypothetical protein STH1049 1 None None None 51892231 Common rplT 50S ribosomal protein L20 STH1093 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 51892472 Common - hypothetical protein STH1334 6 None None None 51892754 Common - branched-chain amino acid ABC transporter permease protein STH1616 142 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51892036 Common - Na+-transporting NADH-quinone reductase subunit 3 STH898 50 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 51892875 Nonpathogen - hypothetical protein STH1737 3 COG2839 COG2839, Uncharacterized protein conserved in bacteria Function unknown 51894166 Common - hypothetical protein STH3030 3 COG1738 COG1738, Uncharacterized conserved protein Function unknown 51894346 Common - ABC transporter permease protein STH3211 16 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 51894178 Common - cobalt ABC transporter permease protein STH3043 97 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 51894069 Common - putative glutamine amidotransferase STH2933 127 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 51891451 Nonpathogen - hypothetical protein STH313 1 None None None 51892813 Common - hypothetical protein STH1675 20 COG4099 COG4099, Predicted peptidase General function prediction only 51891679 Nonpathogen - hypothetical protein STH541 7 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 51893639 Nonpathogen - hypothetical protein STH2501 10 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 51891170 Nonpathogen - hypothetical protein STH32 1 None None None 51891670 Nonpathogen - putative diacylglycerol kinase STH532 2 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 51893025 Nonpathogen - hypothetical protein STH1887 1 None None None 51891482 Common - hypothetical protein STH344 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 51893621 Common paaD phenylacetic acid degradation protein STH2483 137 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 51892304 Common tgt queuine tRNA-ribosyltransferase STH1166 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 51891253 Common - pyruvate formate-lyase STH115 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 51893186 Common - hypothetical protein STH2048 6 None None None 51893226 Common - two-component hybrid sensor and regulator STH2088 178 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51892556 Common - prephenate dehydrogenase STH1418 160 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 51891868 Common - cytochrome C-type protein STH730 25 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 51894133 Nonpathogen fliK flagellar hook-length control protein STH2997 1 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 51891292 Common - hypothetical protein STH154 20 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51893874 Common - hypothetical protein STH2736 76 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 51892498 Common - putative alkaline-shock protein STH1360 44 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 51893833 Common - multidrug efflux protein STH2695 133 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51891554 Common - two-component sensor histidine kinase STH416 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51891216 Common - hypothetical protein STH78 16 COG4475 COG4475, Uncharacterized protein conserved in bacteria Function unknown 51891517 Common - putative allophanate hydrolase STH379 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 51892616 Common - hypothetical protein STH1478 25 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 51893665 Nonpathogen - hypothetical protein STH2527 1 None None None 51894432 Common - aldehyde ferredoxin oxidoreductase-like protein STH3298 40 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 51892770 Nonpathogen - hypothetical protein STH1632 2 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51894057 Common - O-sialoglycoprotein endopeptidase STH2921 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 51893119 Common - hypothetical protein STH1981 53 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 51894302 Common - pyruvate flavodoxin dehydrogenase STH3167 124 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51891443 Common - transposase STH305 72 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 51893699 Common - hypothetical protein STH2561 23 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 51892423 Common - iron ABC transporter permease protein STH1285 189 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 51894248 Common spo0H RNA polymerase factor sigma-70 STH3113 72 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 51893736 Common - aldehyde ferredoxin oxidoreductase STH2598 56 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 51893597 Common - LysR family transcriptional regulator STH2459 186 COG0583 LysR, Transcriptional regulator Transcription 51894281 Common - plastoquinol--plastocyanin reductase STH3146 65 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 51893577 Common - single-strand DNA-specific exonuclease STH2439 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 51892715 Common - enoyl-CoA hydratase/isomerase family protein STH1577 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 51893232 Common - hypothetical protein STH2094 104 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 51893715 Common - ABC transporter ATP-binding protein variant STH2577 61 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 51892760 Common - hypothetical protein STH1622 21 COG3359 COG3359, Predicted exonuclease DNA replication, recombination, and repair 51891146 Common - class-V aminotransferase STH8 167 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 51892383 Common - fructose-bisphosphate aldolase STH1245 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 51893796 Common - 3-Methyladenine DNA glycosylase STH2658 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 51892764 Common - ArsR family transcriptional regulator STH1626 130 COG0640 ArsR, Predicted transcriptional regulators Transcription 51893144 Common - two-component sensor histidine kinase STH2006 206 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51891933 Common - PTS system fructose-specific IIA component STH795 143 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 51894034 Common groES 10 kDa chaperonin STH2898 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 51892600 Common - hypothetical protein STH1462 2 None None None 51891964 Common - methyl-accepting chemotaxis protein STH826 131 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51892710 Common - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit STH1572 172 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 51894383 Common - hypothetical protein STH3248 14 COG1978 COG1978, Uncharacterized protein conserved in bacteria Function unknown 51893026 Nonpathogen - hypothetical protein, proline- and glycine-rich STH1888 10 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 51891427 Common - alpha/beta hydrolase STH289 4 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51892898 Nonpathogen - hypothetical protein STH1760 1 None None None 51891471 Nonpathogen - restriction endonuclease R.SthI STH333 4 None None None 51894011 Common - putative cadmium-transporting ATPase STH2875 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 51894429 Common - formate dehydrogenase alpha subunit STH3295 196 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51891602 Nonpathogen - hypothetical protein STH464 2 None None None 51892093 Common - PTS system phosphocarrier protein Hpr STH955 49 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 51892818 Common - hypothetical protein STH1680 170 COG0344 COG0344, Predicted membrane protein Function unknown 51891154 Common gltX glutamyl-tRNA synthetase STH16 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 51893337 Common - hypothetical protein STH2199 6 None None None 51893512 Nonpathogen - hypothetical protein, glycine-rich STH2374 1 None None None 51891161 Common - hypothetical protein STH23 73 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 51892107 Nonpathogen - S-layer associated protein, putataive STH969 16 None None None 51892180 Nonpathogen - hypothetical protein STH1042 1 None None None 51894426 Common hydN1 electron transport protein STH3292 166 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 51891685 Common - ABC transporter ATP-binding protein STH547 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51894121 Common flhG flagellar biosynthesis switch protein STH2985 235 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51894225 Common rplK 50S ribosomal protein L11 STH3090 248 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 51893946 Common - putative muramoyltetrapeptide carboxypeptidase STH2808 88 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 51892691 Nonpathogen - hypothetical protein STH1553 1 None None None 51892486 Nonpathogen - hypothetical protein STH1348 1 None None None 51892491 Common - serine/threonine protein kinase STH1353 157 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 51893227 Common - hypothetical protein STH2089 37 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 51891318 Common - hypothetical protein STH180 47 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 51893561 Common - hypothetical protein STH2423 17 COG3340 PepE, Peptidase E Amino acid transport and metabolism 51892102 Common - hypothetical protein STH964 70 COG0585 COG0585, Uncharacterized conserved protein Function unknown 51894243 Common - hypothetical protein STH3108 185 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51891183 Common - putative transposase subunit STH45 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51891902 Common - phosphate ABC transporter phosphate-binding protein STH764 147 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 51892724 Common nuoA1 NADH dehydrogenase I subunit A STH1586 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 51892720 Common asnS asparaginyl-tRNA synthetase STH1582 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 51891435 Common - ABC transporter ATP binding protein STH297 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893350 Common - hypothetical protein STH2212 6 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 51894043 Common - hypothetical protein STH2907 19 COG3949 COG3949, Uncharacterized membrane protein Function unknown 51892719 Common - hypothetical protein STH1581 41 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 51894445 Common - putative metalloendopeptidase STH3311 195 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51891892 Common - oligoendopeptidase STH754 82 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 51892541 Common - haloacid dehalogenase-like hydrolase STH1403 132 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 51894144 Common cheX2 chemotaxis protein STH3008 22 COG1406 COG1406, Predicted inhibitor of MCP methylation, homolog of CheC Cell motility and secretion 51891390 Common - putative biotin synthetase STH252 23 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 51893460 Common - Ssf family Na+/solute symporter STH2322 171 COG4147 DhlC, Predicted symporter General function prediction only 51892126 Nonpathogen - hypothetical protein STH988 1 None None None 51893862 Common - ABC transporter ATP-binding protein STH2724 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51894307 Common ftsW cell division protein STH3172 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 51891725 Common - DNA primase STH587 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 51894036 Common - hypothetical protein STH2900 3 None None None 51893765 Common - glycine betaine/carnitine/choline ABC transporter substrate-binding protein STH2627 90 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 51892410 Common - hypothetical protein STH1272 17 COG3554 COG3554, Uncharacterized protein conserved in bacteria Function unknown 51891872 Common - cytochrome C biogenesis protein STH734 190 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51893357 Nonpathogen - hypothetical protein STH2219 8 None None None 51893418 Common - hypothetical protein STH2280 90 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51894108 Common motB flagellar motor protein MotB STH2972 24 COG1360 MotB, Flagellar motor protein Cell motility and secretion 51893197 Nonpathogen - hypothetical protein STH2059 2 None None None 51891632 Common - molybdopterin-guanine dinucleotide biosynthesis protein A STH494 150 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 51893520 Nonpathogen - hypothetical protein STH2382 1 None None None 51892959 Common - recombinase STH1821 232 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51892460 Common - putative arginase STH1322 11 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 51891794 Common - hypothetical protein STH656 19 COG4279 COG4279, Uncharacterized conserved protein Function unknown 51893771 Common - ABC transporter ATP-binding protein STH2633 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51893050 Common - putative amidohydrolase STH1912 70 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 51893066 Common - cobinamide kinase and guanylyltransferase STH1928 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 51893353 Common - hypothetical protein STH2215 13 COG1479 COG1479, Uncharacterized conserved protein Function unknown 51891937 Common - branched chain amino acid ABC transporter ATP-binding protein STH799 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51891181 Common - putative middle wall protein precursor STH43 28 None None None 51891664 Common - hypothetical protein STH526 77 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 51891761 Common - putative iron-sulfur cluster-binding protein STH623 130 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51893684 Common - hypothetical protein STH2546 204 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51892701 Nonpathogen - hypothetical protein STH1563 1 None None None 51892190 Common - thiamin pyrophosphokinase STH1052 42 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 51894331 Common - putative peptidase STH3196 144 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 51891539 Nonpathogen - hypothetical protein STH401 1 None None None 51891610 Nonpathogen - hypothetical protein STH472 1 None None None 51892567 Nonpathogen - hypothetical protein STH1429 1 None None None 51894185 Common rpsM 30S ribosomal protein S13 STH3050 248 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 51892648 Common - glycosyltransferase involved in cell wall biogenesis STH1510 185 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51891221 Nonpathogen - hypothetical protein STH83 1 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 51892119 Nonpathogen - hypothetical protein STH981 3 None None None 51892606 Common - hypothetical protein STH1468 16 None None None 51893505 Common - phosphoglycolate phosphatase STH2367 202 COG0546 Gph, Predicted phosphatases General function prediction only 51894434 Common - two-component sensor histidine kinase STH3300 205 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51894073 Common - putative sugar kinase STH2937 222 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 51891995 Nonpathogen - ABC transporter permease protein STH857 1 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51891672 Common - Era family GTP-binding protein STH534 216 COG1159 Era, GTPase General function prediction only 51893712 Common - histidinol-phosphatase STH2574 38 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 51893983 Nonpathogen - hypothetical protein STH2845 1 None None None 51892688 Common - group II intron-encoding maturase STH1550 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51894137 Common fliH flagellar assembly protein STH3001 5 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 51892560 Common - oligopeptide ABC transporter substrate-binding protein STH1422 207 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51892853 Common - phosphatidylserine decarboxylase STH1715 94 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 51891916 Common - spore coat protein STH778 6 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 51891848 Common dmsD2 hypothetical protein STH710 41 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 51894050 Common spoVE stage V sporulation protein E STH2914 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 51892821 Nonpathogen - hypothetical protein STH1683 1 None None None 51892400 Nonpathogen - hypothetical protein STH1262 2 None None None 51894325 Common - formiminotetrahydrofolate cyclodeaminase STH3190 37 COG3404 COG3404, Methenyl tetrahydrofolate cyclohydrolase Amino acid transport and metabolism 51892733 Common nuoJ1 NADH dehydrogenase I subunit J STH1595 157 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 51891619 Common spoIIP stage II sporulation protein P STH481 15 None None None 51892913 Common - putative dipeptidase STH1775 104 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 51893652 Nonpathogen - putative acetyltransferase STH2514 1 COG0456 RimI, Acetyltransferases General function prediction only 51892904 Nonpathogen - hypothetical protein STH1766 1 None None None 51892000 Nonpathogen - hypothetical protein STH862 1 None None None 51893692 Common - hypothetical protein STH2554 48 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 51894266 Common - cysteine desulfurase STH3131 235 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 51892321 Nonpathogen - hypothetical protein STH1183 1 None None None 51891574 Common - hypothetical protein STH436 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 51892372 Common - sugar ABC transporter permease STH1234 107 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 51892178 Common - two-component sensor histidine kinase STH1040 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 51892891 Nonpathogen - hypothetical protein STH1753 1 None None None 51894398 Common - pyruvate ferredoxin oxidoreductase gamma-delta subunit STH3264 93 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 51894336 Common - molybdenum cofactor biosynthesis protein STH3201 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51893738 Common - formate dehydrogenase beta subunit STH2600 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51891775 Nonpathogen - hypothetical protein STH637 1 None None None 51892328 Common - acetyl-CoA carboxylase, biotin carboxyl carrier protein STH1190 212 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 51891370 Common - hypothetical protein STH232 11 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 51892342 Common carB carbamoyl-phosphate synthase large subunit STH1204 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 51893452 Common - oligopeptide ABC transporter permease protein STH2314 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51892521 Common - hypothetical protein STH1383 19 COG5658 COG5658, Predicted integral membrane protein Function unknown 51892960 Common - alanine dehydrogenase STH1822 167 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 51891706 Common recO DNA repair and genetic recombination protein STH568 108 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 51893974 Common hisB imidazoleglycerol-phosphate dehydratase STH2836 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 51891552 Common - pyruvate dehydrogenase E3 STH414 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 51892737 Common - hypothetical protein STH1599 7 None None None 51891604 Nonpathogen - hypothetical protein STH466 2 None None None 51891982 Common - two-component response regulator STH844 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51892148 Common - chromate efflux transporter STH1010 115 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 51891353 Common - hypothetical protein STH215 67 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 51893081 Nonpathogen - hypothetical protein STH1943 4 None None None 51893931 Nonpathogen - hypothetical protein STH2793 4 None None None 51893132 Common - hypothetical protein STH1994 183 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 51893770 Common - ABC transporter permease protein STH2632 15 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 51893846 Nonpathogen - putative polysaccharide polymerase STH2708 1 None None None 51891496 Common - ATP-dependent Clp protease proteolytic subunit STH358 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51893533 Common - hypothetical protein STH2395 11 None None None 51891945 Common - 3-oxoadipate enol-lactone hydrolase STH807 160 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51893731 Common - N-acetylmuramoyl-L-alanine amidase STH2593 6 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 51892594 Nonpathogen - hypothetical protein STH1456 1 None None None 51892061 Common - two-component response regulator STH923 225 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51893324 Nonpathogen - hypothetical protein STH2186 1 None None None 51891191 Common - putative transposase subunit STH53 93 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 51893559 Common aspS aspartyl-tRNA synthetase STH2421 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51892799 Common - Na+/H+ antiporter subunit STH1661 15 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 51891515 Common minE septum site-determining protein STH377 66 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 51891328 Common - polyprenyl synthetase STH190 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 51892452 Common - glycosylase STH1314 36 COG2152 COG2152, Predicted glycosylase Carbohydrate transport and metabolism 51892520 Nonpathogen - hypothetical protein STH1382 1 None None None 51891291 Nonpathogen - hypothetical protein STH153 1 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 51894340 Common cheX3 chemotaxis protein STH3205 19 COG1406 COG1406, Predicted inhibitor of MCP methylation, homolog of CheC Cell motility and secretion 51892587 Common - hypothetical protein STH1449 50 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 51892741 Common - ferrichrome ABC transporter ATP-binding protein STH1603 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 51891549 Common - pyruvate dehydrogenase E1 alpha subunit STH411 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 51892638 Common - putative membrane-associated Zn-dependent protease STH1500 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 51891413 Common - transposase STH275 86 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 51891955 Common - hypothetical protein STH817 81 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 51893907 Common nuoL2 NADH dehydrogenase I subunit L STH2769 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 51893428 Nonpathogen - hypothetical protein STH2290 1 None None None 51891280 Common - carboxy-terminal processing protease STH142 188 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 51894203 Common rplP 50S ribosomal protein L16 STH3068 217 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 51891480 Common - glutamate racemase STH342 188 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 51891667 Common - phosphate starvation-induced protein STH529 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 51891809 Nonpathogen - hypothetical protein STH671 1 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 51894413 Common - Phosphoenolpyruvate-protein phosphotransferase STH3279 234 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 51893820 Common - putative sugar kinase STH2682 130 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 51892680 Common cheR chemotaxis protein methyltransferase STH1542 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 51891298 Common - ferrochelatase STH160 165 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 51892975 Common - hypothetical protein STH1837 240 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 51892262 Common - group II intron-encoding maturase STH1124 95 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51893474 Common - putative transcriptional regulator STH2336 60 COG1309 AcrR, Transcriptional regulator Transcription 51892171 Common - subtilisin-like alkaline serine protease STH1033 125 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 51891690 Common - putative mutase STH552 69 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 51891748 Common - hypothetical protein STH610 23 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51894369 Common spoVT stage V sprulation protein T STH3234 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 51894187 Common infA translation initiation factor IF-1 STH3052 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 51894284 Common - putative ferredoxin STH3149 114 COG0348 NapH, Polyferredoxin Energy production and conversion 51891525 Common - hypothetical protein, proline-rich STH387 8 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51893261 Common - ATP/GTP-binding protein STH2123 216 COG2262 HflX, GTPases General function prediction only 51894214 Common rpsG 30S ribosomal protein S7 STH3079 247 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 51893708 Common - hypothetical protein STH2570 8 None None None 51892163 Common - acetyl-coenzyme A synthetase STH1025 215 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 51893582 Common - hypothetical protein STH2444 18 COG3294 COG3294, Uncharacterized conserved protein Function unknown 51892271 Nonpathogen - hypothetical protein STH1133 1 None None None 51892062 Common - universal stress protein STH924 164 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 51893151 Common - hypothetical protein STH2013 102 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 51893464 Common - putative glutamine amidotransferase STH2326 114 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 51894169 Nonpathogen - hypothetical protein STH3033 1 None None None 51892790 Common - ABC transporter permease protein STH1652 148 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51892181 Common - oligopeptide ABC transporter substrate-binding protein STH1043 139 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 51891635 Nonpathogen - hypothetical protein, glycine-rich STH497 1 None None None 51893201 Common - ethanolamine ammonia-lyase, heavy chain STH2063 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 51893369 Common - phosphoglycerate dehydrogenase, C-terminal domain STH2231 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 51894227 Common - hypothetical protein STH3092 16 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 51891898 Common - ABC transporter substrate-binding protein STH760 40 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51893868 Common - hypothetical protein STH2730 3 COG4758 COG4758, Predicted membrane protein Function unknown 51893446 Common ulaA ascorbate-specific PTS system enzyme IIC STH2308 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 51892245 Common - oligopeptide ABC transporter substrate-binding protein STH1107 204 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51891244 Common - LysR family transcriptional regulator STH106 194 COG0583 LysR, Transcriptional regulator Transcription 51891377 Common - RNA polymerase sigma-54 factor STH239 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 51893268 Nonpathogen - hypothetical protein STH2130 1 None None None 51891571 Common - hypothetical protein STH433 70 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 51892630 Common tsf elongation factor Ts STH1492 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 51891822 Nonpathogen - hypothetical protein STH684 2 None None None 51893314 Common sbcD DNA repair exonuclease STH2176 118 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 51892068 Common - glutamate synthetase STH930 122 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 51892010 Common - hypothetical protein STH872 180 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 51894196 Common rpsH 30S ribosomal protein S8 STH3061 248 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 51893569 Common - hypothetical protein STH2431 14 None None None 51892335 Common - ABC transporter ATP-binding protein STH1197 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 51891198 Common - putative carboxy-terminal processing proteinase STH60 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 51891657 Common - hypothetical protein STH519 79 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 51892059 Common - two-component response regulator STH921 224 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51892419 Nonpathogen - hypothetical protein STH1281 1 None None None 51894443 Nonpathogen - hypothetical protein STH3309 14 None None None 51891345 Nonpathogen - hypothetical protein STH207 1 None None None 51891503 Common - putative acetyltransferase STH365 75 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51893674 Common - fumarate hydratase STH2536 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 51894124 Common flhB flagellar biosynthesis protein STH2988 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 51891267 Common - oligopeptide ABC transporter permease protein STH129 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51893013 Common - short chain dehydrogenase STH1875 215 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51893113 Common - ABC transporter ATP-binding protein variant STH1975 221 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 51892283 Common - ABC transporter ATP-binding protein STH1145 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51893165 Common - hypothetical protein STH2027 4 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51893284 Common - hypothetical protein STH2146 19 COG3832 COG3832, Uncharacterized conserved protein Function unknown 51894401 Common - hypothetical protein STH3267 70 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 51893053 Common - hypothetical protein STH1915 12 COG3832 COG3832, Uncharacterized conserved protein Function unknown 51893433 Nonpathogen - transposase-like protein STH2295 1 None None None 51891652 Common rpsU 30S ribosomal protein S21 STH514 111 None None None 51893940 Nonpathogen - hypothetical protein STH2802 1 None None None 51894264 Common - 3-deoxy-7-phosphoheptulonate synthase STH3129 186 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 51894113 Common fliD flagellar hook-associated protein STH2977 99 COG1345 FliD, Flagellar capping protein Cell motility and secretion 51892350 Common - UDP-N-acetylglucosamine enolpyruvyl transferase STH1212 220 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 51893004 Common - 3-dehydroquinate dehydratase STH1866 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 51894373 Common spoVC peptidyl-tRNA hydrolase STH3238 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 51893135 Nonpathogen - hypothetical protein STH1997 1 None None None 51893307 Nonpathogen - hypothetical protein STH2169 3 None None None 51893916 Common - hypothetical protein STH2778 25 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51892580 Common - hypothetical protein STH1442 47 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 51892378 Nonpathogen - hypothetical protein STH1240 11 None None None 51893293 Common - uridine phosphorylase STH2155 95 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 51894096 Nonpathogen - hypothetical protein STH2960 1 None None None 51891364 Common uraA uracil permease STH226 119 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 51893170 Nonpathogen - hypothetical protein STH2032 1 None None None 51893217 Nonpathogen - hypothetical protein STH2079 1 None None None 51891837 Nonpathogen - hypothetical protein STH699 8 None None None 51892208 Nonpathogen - acetyltransferase STH1070 2 COG0456 RimI, Acetyltransferases General function prediction only 51894088 Nonpathogen - hypothetical protein, alanine-rich STH2952 1 None None None 51893401 Common - putative transposase STH2263 54 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 51892539 Nonpathogen - hypothetical protein STH1401 1 None None None 51892295 Common - iron ABC transporter substrate-binding protein STH1157 144 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 51894366 Common - hypothetical protein STH3231 156 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 51892994 Common spoIIIAG stage III sporulation protein AG STH1856 14 None None None 51893273 Common - hypothetical protein STH2135 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51893377 Nonpathogen - hypothetical protein STH2239 1 None None None 51891971 Common aspA aspartate ammonia-lyase STH833 239 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 51891595 Common - putative branched-chain amino acid transport protein STH457 105 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 51891626 Common - amino acid ABC transporter permease protein STH488 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51894198 Common rplE 50S ribosomal protein L5 STH3063 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 51894457 Nonpathogen - hypothetical protein STH3323 1 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 51893604 Common - methylmalonyl-CoA mutase N-terminal domain STH2466 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 51893362 Common - hypothetical protein STH2224 16 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51892998 Nonpathogen spoIIIAC stage III sporulation protein AC STH1860 2 None None None 51893888 Common - argininosuccinate lyase STH2750 214 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 51892471 Common - Dioxygenase related to 2-nitropropane dioxygenase STH1333 90 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 51892672 Nonpathogen - hypothetical protein STH1534 1 None None None 51893615 Common - acyl-CoA dehydrogenase, short-chain specific STH2477 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 51891488 Common - PTS system N-acetylglucosamine-specific enzyme IIABC component STH350 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism