Desulfotalea psychrophila LSv54, complete genome NC_006138 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 51245338 Common - glycyl-tRNA synthetase, beta subunit DP1486 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 51246710 Nonpathogen - hypothetical protein DP2858 1 None None None 51246855 Common - catalase DP3003 126 COG0753 KatE, Catalase Inorganic ion transport and metabolism 51245129 Common - similar to carbon starvation protein A DP1277 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 51245787 Common - hypothetical protein DP1935 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 51246014 Common - hypothetical protein DP2162 3 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 51245415 Common - hypothetical protein DP1563 2 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 51245626 Common - similar to two-component system sensor histidine kinase (Nar family) DP1774 149 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 51244101 Common - similar to iron-sulfur proteins DP0249 28 COG2221 DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits Energy production and conversion 51246800 Common - cystathionine beta-lyase DP2948 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 51245745 Common - similar to sigma regulatory factor DP1893 38 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 51246536 Common flgI flagellar basal body P-ring protein DP2684 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 51243979 Nonpathogen - hypothetical protein DP0127 4 None None None 51244466 Nonpathogen - hypothetical protein DP0614 1 None None None 51244263 Nonpathogen - hypothetical protein DP0411 2 None None None 51245935 Common - similar to ATP-dependent helicase DP2083 133 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 51244634 Common - translation-associated GTPase DP0782 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 51244741 Common - threonine dehydratase DP0889 224 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 51244771 Common - proton-linked D-serine/D-alanine/glycine symporter DP0919 118 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 51245082 Common - similar to phosphate ABC-transporter, permease protein DP1230 159 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51244749 Nonpathogen - hypothetical protein DP0897 4 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245878 Nonpathogen - hypothetical protein DP2026 2 None None None 51244757 Common - hypothetical protein DP0905 208 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51245859 Common - similar to terminase, small subunit DP2007 22 COG3728 XtmA, Phage terminase, small subunit DNA replication, recombination, and repair 51245011 Common - phosphatidate cytidylyltransferase DP1159 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 51244164 Nonpathogen - hypothetical protein DP0312 1 None None None 51246301 Common - hypothetical protein DP2449 9 None None None 51245955 Common oforA 2-oxoacid ferredoxin oxidoreductase, alpha subunit DP2103 110 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51246308 Common - hypothetical protein DP2456 11 COG2152 COG2152, Predicted glycosylase Carbohydrate transport and metabolism 51246233 Common - hypothetical protein DP2381 29 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51246519 Common - similar to flagellar protein (FliL) DP2667 40 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 51246564 Nonpathogen - hypothetical protein DP2712 2 None None None 51245802 Common - similar to aminotransferase and cobyric acid synthase (CobD and CobQ) DP1950 238 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 51246295 Common - hypothetical protein DP2443 3 COG3895 COG3895, Predicted periplasmic protein General function prediction only 51246405 Common - cell division ATP-binding protein (FtsE) DP2553 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 51246047 Common - hypothetical protein DP2195 33 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 51244272 Nonpathogen - hypothetical protein DP0420 1 None None None 51246525 Common - similar to flagellar biosynthetic protein (FliR) DP2673 122 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 51244084 Nonpathogen - hypothetical protein DP0232 1 None None None 51246061 Common - NADH dehydrogenase (ubiquinone) I, chain F DP2209 172 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 51243974 Common - similar to 17 kDa surface antigen DP0122 15 COG4520 LipA, Surface antigen Cell envelope biogenesis, outer membrane 51244804 Common - alcohol dehydrogenase DP0952 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51244385 Common - similar to MCBG protein (microcin resistance protein) DP0533 61 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 51244721 Common - hypothetical protein DP0869 37 COG1409 Icc, Predicted phosphohydrolases General function prediction only 51244781 Common - [Protein-PII] uridylyltransferase DP0929 125 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 51246437 Common - uracil-DNA glycosylase DP2585 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 51245509 Nonpathogen - hypothetical protein DP1657 1 None None None 51244798 Common - hypothetical protein DP0946 63 None None None 51244579 Common - ketol-acid reductoisomerase DP0727 187 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 51246143 Common - similar to two-component system response regulator (hybrid family) DP2291 224 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51243918 Common - similar to long-chain fatty acid transport protein (FadL precursor) DP0066 74 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 51245009 Common - ribosome recycling factor DP1157 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 51246637 Common - riboflavin biosynthesis protein (RibD) DP2785 233 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 51245233 Nonpathogen - hypothetical protein DP1381 2 None None None 51246586 Common - ribose-phosphate pyrophosphokinase DP2734 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 51244298 Common - C4-dicarboxylate permease (large subunit), probably cold-shock inducible DP0446 101 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51245073 Nonpathogen - hypothetical protein DP1221 1 None None None 51244116 Common - similar to coenzyme F390 synthetase DP0264 107 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 51245705 Common - similar to methyltransferase DP1853 105 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51244439 Common - hypothetical protein DP0587 4 COG5633 COG5633, Predicted periplasmic lipoprotein General function prediction only 51244310 Common - hypothetical protein DP0458 79 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 51244172 Nonpathogen - hypothetical protein DP0320 1 None None None 51245773 Nonpathogen - hypothetical protein DP1921 17 COG2391 COG2391, Predicted transporter component General function prediction only 51245510 Common - similar to flagellar protein FliS DP1658 86 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 51245914 Nonpathogen - hypothetical protein DP2062 1 None None None 51246021 Common - DNA-binding protein HU DP2169 212 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 51245723 Common - hypothetical protein DP1871 24 None None None 51245122 Common - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein DP1270 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51244736 Common - two-component system response regulator (hybrid family) DP0884 223 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51244108 Nonpathogen - hypothetical protein DP0256 1 None None None 51244279 Common - similar to soluble lytic murein transglycosylase [precursor] DP0427 169 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51244521 Common - Na+/H+ antiporter DP0669 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 51245152 Common - similar to rhodanese DP1300 59 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51244692 Common - DNA mismatch repair protein DP0840 207 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 51245455 Nonpathogen - hypothetical protein DP1603 1 None None None 51246205 Common - histidine ammonia-lyase DP2353 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 51246945 Nonpathogen - hypothetical protein DP3093 5 None None None 51246037 Common - putative ABC transporter ATP-binding protein DP2185 248 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51245448 Common - hypothetical protein DP1596 11 None None None 51245046 Nonpathogen - hypothetical protein DP1194 1 None None None 51245778 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP1926 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246719 Common - ferric uptake regulatory protein DP2867 167 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 51246148 Common - hypothetical protein DP2296 75 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 51246441 Common - gamma-glutamyl kinase DP2589 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 51246936 Common - hypothetical protein DP3084 144 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 51244155 Common phdd similar to dihydrolipoamide dehydrogenase, E3 component DP0303 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 51246075 Common - dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase DP2223 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 51244324 Common - hypothetical protein DP0472 24 None None None 51244621 Common - dihydroorotate dehydrogenase 2 DP0769 57 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 51246625 Common - hypothetical protein DP2773 210 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 51244729 Common - para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II DP0877 240 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 51243990 Common - sodium/dicarboxylate symporter DP0138 125 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 51245191 Common - hypothetical protein DP1339 34 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 51243997 Common - hypothetical protein DP0145 37 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 51245610 Nonpathogen - hypothetical protein DP1758 3 None None None 51245307 Common - similar to prepilin peptidase dependent protein D [Precursor] DP1455 19 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 51245402 Common - similar to NADH oxidase DP1550 236 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 51244034 Nonpathogen - hypothetical protein DP0182 1 None None None 51244556 Common - phosphoribosylformylglycinamidine synthase DP0704 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 51245902 Nonpathogen - hypothetical protein DP2050 3 COG4271 COG4271, Predicted nucleotide-binding protein containing TIR -like domain Transcription 51245490 Common - hypothetical protein DP1638 21 None None None 51244374 Common smpB SsrA-binding protein DP0522 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 51244645 Common - RNA polymerase sigma factor (RpoD) DP0793 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 51245995 Common - hypothetical protein DP2143 28 None None None 51246577 Common - similar to HemK methylase DP2725 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 51244009 Common - hypothetical protein DP0157 7 None None None 51246771 Common - glutamine-dependent NAD(+) synthetase DP2919 222 COG0171 NadE, NAD synthase Coenzyme metabolism 51244372 Common - similar to predicted helicase DP0520 157 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 51245543 Common - selenocysteine synthase DP1691 70 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 51244459 Nonpathogen - hypothetical protein DP0607 1 None None None 51246790 Common - aspartate aminotransferase DP2938 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 51244946 Common - similar to riboflavin kinase (FAD synthetase) DP1094 211 COG0196 RibF, FAD synthase Coenzyme metabolism 51244093 Common - hypothetical protein DP0241 4 None None None 51245797 Common - exodeoxyribonuclease VII, large chain DP1945 204 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 51246345 Nonpathogen - hypothetical protein DP2493 1 None None None 51245945 Common - similar to acyl carrier protein DP2093 16 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244919 Nonpathogen - hypothetical protein DP1067 1 None None None 51245290 Common - hypothetical protein DP1438 59 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 51246746 Common - cell division protein FtsA DP2894 184 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 51244121 Common - Fe-S oxidoreductase DP0269 88 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 51244989 Common rpsN 30S ribosomal protein S14 DP1137 199 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 51244256 Common - hypothetical protein DP0404 2 None None None 51245312 Nonpathogen - hypothetical protein DP1460 1 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 51246640 Common - 3-oxoacyl-[acyl-carrier-protein] synthase II DP2788 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246424 Nonpathogen - hypothetical protein DP2572 1 None None None 51244639 Common - hypothetical protein DP0787 95 COG0762 COG0762, Predicted integral membrane protein Function unknown 51245050 Common - similar to glutamate dehydrogenase DP1198 180 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 51246763 Common - hypothetical protein DP2911 196 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 51243909 Nonpathogen - hypothetical protein DP0057 1 None None None 51243922 Common - hypothetical protein DP0070 10 None None None 51246085 Common - similar to pyrroline-5-carboxylate reductase DP2233 214 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 51245366 Common - hypothetical protein DP1514 76 COG0730 COG0730, Predicted permeases General function prediction only 51244535 Common - NADP-reducing hydrogenase, 51 kDa subunit DP0683 189 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 51244317 Common - similar to molybdenum ABC transporter, periplasmic substrate binding protein DP0465 60 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 51244705 Common - hypothetical protein DP0853 50 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 51246150 Common - hypothetical protein DP2298 38 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 51246252 Common - hypothetical protein DP2400 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 51246764 Common - hypothetical protein DP2912 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 51245516 Common - assimilatory sulfite reductase DP1664 145 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 51246780 Common - cysteinyl-tRNA synthetase DP2928 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245028 Common - similar to oligopeptide ABC transporter, oligopeptide-binding protein DP1176 199 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51246260 Common - similar to (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase DP2408 185 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 51246316 Common - hypothetical protein DP2464 24 COG4392 COG4392, Predicted membrane protein Function unknown 51244077 Nonpathogen - hypothetical protein DP0225 1 None None None 51246186 Common - similar to oxidoreductase DP2334 198 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 51245361 Common - D-cysteine desulfhydrase DP1509 71 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 51245251 Nonpathogen - hypothetical protein DP1399 5 None None None 51244970 Common - DNA-directed RNA polymerase, beta' subunit DP1118 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 51246123 Common - deoxycytidylate deaminase DP2271 84 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 51246836 Common - hypothetical protein DP2984 6 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 51244282 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase DP0430 194 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 51244845 Nonpathogen - hypothetical protein DP0993 1 None None None 51245738 Common - similar to two-component system sensor histidine kinase (Pho family) DP1886 224 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 51246100 Common - similar to opine/octopine dehydrogenase, subunit B DP2248 110 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 51243868 Nonpathogen - hypothetical protein DP0016 1 None None None 51244937 Common - ferrochelatase DP1085 176 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 51244348 Common - hypothetical protein DP0496 86 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51246816 Nonpathogen - hypothetical protein DP2964 1 COG4496 COG4496, Uncharacterized protein conserved in bacteria Function unknown 51245566 Common - similar to transposase DP1714 145 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 51245823 Common - similar to ATP-binding proteins DP1971 72 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51244067 Common - Fe(III) ABC-transporter, permease protein DP0215 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 51245852 Common - hypothetical protein DP2000 2 None None None 51244591 Common - hypothetical protein DP0739 161 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 51245661 Common - peptide chain release factor 2 DP1809 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 51246272 Common - hypothetical protein DP2420 7 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51244143 Common - similar to extracellular deoxyribonuclease [Precursor] DP0291 30 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 51246799 Nonpathogen - hypothetical protein DP2947 1 None None None 51245485 Nonpathogen - hypothetical protein DP1633 1 None None None 51244808 Common - tyrosine-specific transport protein DP0956 38 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 51243900 Common - similar to lipopolysaccharide biosynthesis protein (WbpM) DP0048 150 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51246388 Common - ATP-dependent protease La DP2536 204 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 51246378 Common - quinolinate synthetase DP2526 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 51246265 Common - hypothetical protein DP2413 46 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 51245838 Common - hypothetical protein DP1986 19 None None None 51245176 Common - similar to tRNA pseudouridine synthase A DP1324 234 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 51244953 Common - riboflavin synthase, beta chain DP1101 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 51246925 Nonpathogen - hypothetical protein DP3073 13 None None None 51246492 Nonpathogen - hypothetical protein DP2640 1 None None None 51244131 Nonpathogen - hypothetical protein DP0279 1 None None None 51244667 Common - ATP synthase, A chain DP0815 207 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 51244001 Common - dipeptide ABC transporter, permease protein (DppC) DP0149 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51244660 Common - hypothetical protein DP0808 122 COG4105 ComL, DNA uptake lipoprotein General function prediction only 51245110 Common - similar to transcription regulator (AsnC-family) DP1258 169 COG1522 Lrp, Transcriptional regulators Transcription 51244054 Nonpathogen - hypothetical protein DP0202 1 COG3640 CooC, CO dehydrogenase maturation factor Cell division and chromosome partitioning 51245887 Common - similar to Mrr restriction system protein DP2035 46 COG1715 Mrr, Restriction endonuclease Defense mechanisms 51244651 Nonpathogen - DsrD protein DP0799 5 None None None 51245534 Common - similar to cytochrome c-type forming protein Ccs1 DP1682 56 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 51245035 Common - hypothetical protein DP1183 25 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 51246896 Common - electron transfer protein (PduS) DP3044 140 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 51246226 Common - hypothetical protein DP2374 63 COG1479 COG1479, Uncharacterized conserved protein Function unknown 51244417 Common - hypothetical protein DP0565 159 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 51246609 Common - similar to ribosomal large subunit pseudouridine synthase D DP2757 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 51246398 Common - hypothetical protein DP2546 14 COG2830 COG2830, Uncharacterized protein conserved in bacteria Function unknown 51246824 Common - biopolymer transport protein (ExbD2) DP2972 112 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 51244468 Common pflD formate C-acetyltransferase DP0616 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 51244273 Common - hypothetical protein DP0421 12 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 51244658 Common - similar to protein-export membrane protein SecD DP0806 218 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 51246452 Common - leucyl-tRNA synthetase DP2600 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245174 Nonpathogen - hypothetical protein DP1322 4 COG2043 COG2043, Uncharacterized protein conserved in archaea Function unknown 51244404 Common - hypothetical protein DP0552 116 COG2962 RarD, Predicted permeases General function prediction only 51245907 Common - hypothetical protein DP2055 27 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 51246026 Nonpathogen - hypothetical protein DP2174 7 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 51244682 Common - ATP synthase, subunit b (AtpF) DP0830 99 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 51246732 Nonpathogen - hypothetical protein DP2880 2 None None None 51244951 Common - riboflavin synthase subunit alpha DP1099 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 51244440 Common - hypothetical protein DP0588 19 COG3417 FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) General function prediction only 51244454 Common - porphobilinogen deaminase DP0602 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 51246482 Common - similar to NAD(P)H steroid dehydrogenase DP2630 182 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51244565 Common - hypothetical protein DP0713 12 None None None 51246671 Common - peptide chain release factor 3 DP2819 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 51246280 Nonpathogen - hypothetical protein DP2428 1 None None None 51243968 Common - excinuclease ABC, subunit A DP0116 239 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 51244201 Common - similar to nitrogen regulatory protein P-II family proteins DP0349 16 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 51244338 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP0486 87 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51245549 Common - acriflavine resistance protein B DP1697 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 51245600 Common - hypothetical protein DP1748 31 COG4671 COG4671, Predicted glycosyl transferase General function prediction only 51244091 Nonpathogen - hypothetical protein DP0239 1 None None None 51245430 Common - hypothetical protein DP1578 10 None None None 51246585 Common - similar to 50S ribosomal protein L25 DP2733 188 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 51245224 Common - hypothetical protein DP1372 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 51246159 Common - hypothetical protein DP2307 80 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 51245439 Common - hypothetical protein DP1587 3 None None None 51244461 Nonpathogen - hypothetical protein DP0609 2 None None None 51246693 Common - phosphoenolpyruvate synthase/pyruvate phosphate dikinase DP2841 16 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 51246876 Common - similar to pseudouridine synthase DP3024 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 51246163 Common - hypothetical protein DP2311 13 COG3478 COG3478, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 51245542 Common - ATP-dependent RNA helicase DP1690 231 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 51246570 Common tatC similar to Sec-independent protein translocase protein TatC DP2718 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 51244895 Common - similar to hydrogenase, component E-formate hydrogenlyase subunit 5 DP1043 192 COG3261 HycE, Ni,Fe-hydrogenase III large subunit Energy production and conversion 51246358 Common - homocysteine synthase DP2506 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 51246133 Common - DNA topoisomerase IV subunit A DP2281 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 51245964 Nonpathogen - hypothetical protein DP2112 1 None None None 51244341 Common - hypothetical protein DP0489 145 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51246705 Common - hypothetical protein DP2853 16 COG1159 Era, GTPase General function prediction only 51246177 Nonpathogen - hypothetical protein DP2325 1 None None None 51244423 Common hisS histidyl-tRNA synthetase DP0571 246 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245321 Common - similar to fimbrial biogenesis protein PilY1 DP1469 42 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 51245343 Common - similar to two-component system response regulator (Ntr family) DP1491 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245070 Common - lytic transglycosylase DP1218 157 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51244434 Common hypA hydrogenase accessory protein HypA DP0582 77 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 51243889 Common - hypothetical protein DP0037 2 None None None 51244418 Nonpathogen - hypothetical protein DP0566 1 None None None 51246092 Common - methionine aminopeptidase, MAP DP2240 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 51244365 Common - similar to toxin secretion ATP-binding protein DP0513 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 51246959 Common - similar to spermidine synthase DP3107 30 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 51246107 Common - hypothetical protein DP2255 6 None None None 51244928 Nonpathogen - similar to DnaK suppressor protein (partial length) DP1076 1 None None None 51245552 Common - O-acetylhomoserine sulfhydrylase DP1700 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 51246369 Common - hypothetical protein DP2517 9 None None None 51245108 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP1256 200 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51243882 Common - galactosyltransferase DP0030 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 51246257 Common - hypothetical protein DP2405 15 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 51245920 Nonpathogen - hypothetical protein DP2068 1 None None None 51243988 Common - hypothetical protein DP0136 211 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 51244966 Common rplA 50S ribosomal protein L1 DP1114 240 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 51244012 Common - similar to periplasmic [NiFeSe] hydrogenase, small subunit [Precursor] DP0160 81 COG1740 HyaA, Ni,Fe-hydrogenase I small subunit Energy production and conversion 51245359 Common - hypothetical protein DP1507 2 None None None 51245578 Common - aldehyde oxidoreductase DP1726 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 51246859 Common - hypothetical protein DP3007 75 COG1556 COG1556, Uncharacterized conserved protein Function unknown 51243981 Common - hypothetical protein DP0129 103 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 51245218 Common - hypothetical protein DP1366 36 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 51244515 Nonpathogen - hypothetical protein DP0663 2 None None None 51245715 Common - similar to efflux pump antibiotic resistance protein DP1863 202 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 51245560 Nonpathogen - hypothetical protein DP1708 1 None None None 51246446 Common - hypothetical protein DP2594 154 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 51245586 Common - uroporphyrinogen III synthase/methyltransferase (HemD+CobA) DP1734 207 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 51244381 Common - S-ribosylhomocysteinase DP0529 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 51245480 Common - similar to lipoprotein releasing system transmembrane protein (LolC) DP1628 183 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51245751 Common - similar to methyl-accepting chemotaxis protein (TlpA) DP1899 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51244901 Nonpathogen - hypothetical protein DP1049 1 None None None 51246083 Common - similar to phosphoglucomutase/phosphomannomutase DP2231 184 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 51245929 Common - L-lactate permease DP2077 104 COG1620 LldP, L-lactate permease Energy production and conversion 51245203 Common - similar to molybdenum ABC transporter, permease protein DP1351 200 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 51246509 Common - similar to flagellar motor switch protein (FliG) DP2657 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 51246877 Common - hypothetical protein DP3025 44 COG0731 COG0731, Fe-S oxidoreductases Energy production and conversion 51245055 Nonpathogen - hypothetical protein DP1203 1 None None None 51245167 Common - NADH dehydrogenase, subunit 6 DP1315 47 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 51246797 Common - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase DP2945 181 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 51244537 Nonpathogen - hypothetical protein DP0685 1 None None None 51246193 Nonpathogen - hypothetical protein DP2341 1 None None None 51244042 Common - chaperonin GroEL DP0190 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 51244546 Nonpathogen - hypothetical protein DP0694 1 None None None 51245804 Common - similar to nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (CobT) DP1952 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 51244530 Common - sugar ABC transporter, permease protein DP0678 108 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 51244228 Common - two-component system response regulator (Ntr family) DP0376 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51246688 Common - hypothetical protein DP2836 113 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 51246475 Common - similar to glutamate synthase, alpha subunit DP2623 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 51244244 Common - hypothetical protein DP0392 94 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 51245180 Common - imidazoleglycerol-phosphate dehydratase DP1328 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 51244778 Common - cytochrome D ubiquinol oxidase, subunit I DP0926 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 51244986 Common - 50S ribosomal protein L14 DP1134 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 51244615 Nonpathogen - hypothetical protein DP0763 1 None None None 51244231 Common - similar to sugar ABC transporter, permease protein DP0379 107 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 51244848 Common - similar to peptidyl-prolyl cis-trans isomerase D DP0996 163 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 51244493 Common - hypothetical protein DP0641 8 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51245150 Nonpathogen - hypothetical protein DP1298 1 None None None 51245479 Common - similar to lipoprotein releasing system ATP-binding protein (LolD) DP1627 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51244309 Common - molybdenum ABC transporter, substrate binding periplasmic protein (ModA) DP0457 138 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 51246117 Common - similar to 6-pyruvoyl-tetrahydropterin synthase DP2265 19 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 51246651 Common - signal recognition particle protein (SRP54) DP2799 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 51246066 Common - 3-deoxy-manno-octulosonate cytidylyltransferase DP2214 137 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 51246567 Common - hypothetical protein DP2715 179 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51245725 Common - hypothetical protein DP1873 62 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51246489 Common - hypothetical protein DP2637 189 COG0218 COG0218, Predicted GTPase General function prediction only 51245335 Common - molybdenum cofactor biosynthesis protein C (MoaC) DP1483 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 51246843 Common - molybdenum cofactor biosynthesis protein (MoaA) DP2991 199 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 51245758 Common - similar to ribonuclease R DP1906 192 COG0557 VacB, Exoribonuclease R Transcription 51246099 Common - hypothetical protein DP2247 18 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 51245607 Nonpathogen - hypothetical protein DP1755 4 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 51244580 Common - dihydropteridine reductase DP0728 75 COG0778 NfnB, Nitroreductase Energy production and conversion 51245679 Common - propanediol utilization protein (PduU) DP1827 20 COG4810 EutS, Ethanolamine utilization protein Amino acid transport and metabolism 51244331 Common - Fe-center hydrogenase, large subunit DP0479 52 COG4624 COG4624, Iron only hydrogenase large subunit, C-terminal domain General function prediction only 51246721 Common - tyrosyl-tRNA synthetase DP2869 243 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51244990 Common - 30S ribosomal protein S8, N-terminal fragment DP1138 212 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 51244943 Common - lambda CII stability-governing protein (HflC) DP1091 160 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 51245526 Nonpathogen - hypothetical protein DP1674 1 None None None 51245681 Common - hypothetical protein DP1829 106 COG3177 COG3177, Uncharacterized conserved protein Function unknown 51245461 Common - hypothetical protein DP1609 4 None None None 51246430 Common - hypothetical protein DP2578 92 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51246931 Common - similar to glutamyl-tRNA reductase DP3079 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 51243959 Common - similar to signal peptidase I DP0107 207 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 51246546 Nonpathogen - hypothetical protein DP2694 1 None None None 51244833 Common - hypothetical protein DP0981 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 51246950 Common - similar to dihydropteroate synthase DP3098 217 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 51245645 Common - similar to two-component system sensory/regulatory protein (hybrid family) DP1793 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51245285 Common - hypothetical protein DP1433 18 COG2510 COG2510, Predicted membrane protein Function unknown 51245765 Common - gluthatione-regulated K+/H+ efflux antiporter DP1913 203 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51245616 Common - seryl-tRNA synthetase DP1764 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 51246203 Common - similar to imidazolonepropionase DP2351 102 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 51246623 Common - phosphatidylserine decarboxylase DP2771 96 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 51244763 Common - hypothetical protein DP0911 6 None None None 51245639 Common - similar to hemerythrin DP1787 46 COG2703 COG2703, Hemerythrin Inorganic ion transport and metabolism 51245492 Common - hypothetical protein DP1640 30 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 51245638 Nonpathogen - hypothetical protein DP1786 13 None None None 51246938 Common - similar to biotin acetyl-CoA carboxylase ligase DP3086 164 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 51244068 Common - Fe(III) ABC transporter, ATP-binding protein DP0216 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 51244886 Common - alcohol dehydrogenase DP1034 168 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51244245 Common - similar to two-component system sensor histidine kinase (Ntr family) DP0393 159 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51245159 Nonpathogen - hypothetical protein DP1307 1 None None None 51245972 Common - hypothetical protein DP2120 3 None None None 51246128 Common - hypothetical protein DP2276 51 COG3807 COG3807, Uncharacterized protein conserved in bacteria Function unknown 51245790 Common - similar to tetraacyldisaccharide 4'-kinase (LpxK) DP1938 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 51245187 Nonpathogen - hypothetical protein DP1335 1 None None None 51244033 Common - similar to transposase, fragment DP0181 4 None None None 51246170 Common - hypothetical protein DP2318 64 COG1683 COG1683, Uncharacterized conserved protein Function unknown 51246658 Common - ribonuclease HII DP2806 209 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 51244865 Common - methylviologen-reducing hydrogenase, alpha chain DP1013 99 COG3259 FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit Energy production and conversion 51244193 Common - hypothetical protein DP0341 32 COG1433 COG1433, Uncharacterized conserved protein Function unknown 51246287 Nonpathogen - hypothetical protein DP2435 14 COG1814 COG1814, Uncharacterized membrane protein Function unknown 51245267 Nonpathogen - hypothetical protein DP1415 1 None None None 51244908 Nonpathogen - hypothetical protein DP1056 1 None None None 51246417 Nonpathogen - hypothetical protein DP2565 1 None None None 51246131 Nonpathogen - hypothetical protein DP2279 1 None None None 51246362 Common - similar to transcriptional regulator DP2510 76 COG0819 TenA, Putative transcription activator Transcription 51246393 Common - hypothetical protein DP2541 120 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 51244083 Nonpathogen - hypothetical protein DP0231 1 None None None 51246012 Common - hypothetical protein DP2160 19 None None None 51243895 Common - cell wall biogenesis protein (WbpE) DP0043 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 51246712 Common - guanylate kinase DP2860 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 51243933 Common - similar to ABC transporter, ATP-binding protein DP0081 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51244917 Nonpathogen - hypothetical protein DP1065 1 None None None 51244166 Common - sensory transduction system regulatory protein DP0314 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51245336 Common - DnaK suppressor protein DP1484 148 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 51245048 Nonpathogen - hypothetical protein DP1196 1 None None None 51246297 Nonpathogen - hypothetical protein DP2445 1 None None None 51245193 Common - transcription regulator DP1341 128 COG2606 EbsC, Uncharacterized conserved protein Function unknown 51246914 Common - Mn/Zn ABC transporter, permease DP3062 193 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 51245441 Common - hypothetical protein DP1589 5 None None None 51244589 Common - hypothetical protein DP0737 82 COG1238 COG1238, Predicted membrane protein Function unknown 51244780 Common - nitrogen regulatory protein P-II DP0928 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 51244022 Nonpathogen - hypothetical protein DP0170 1 None None None 51245672 Common - similar to multidrug-efflux transporter regulator DP1820 63 COG0789 SoxR, Predicted transcriptional regulators Transcription 51246631 Common - hypothetical protein DP2779 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 51246860 Common - RNAse E DP3008 184 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 51245378 Common - hypothetical protein DP1526 97 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 51246290 Nonpathogen - hypothetical protein DP2438 1 None None None 51244711 Common - isoprenoid biosynthesis protein with amidotransferase-like domain DP0859 41 COG3155 ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 51246278 Common - hypothetical protein DP2426 15 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 51245919 Common - hypothetical protein DP2067 122 COG3326 COG3326, Predicted membrane protein Function unknown 51244302 Nonpathogen - hypothetical protein DP0450 1 None None None 51244837 Common - similar to methyl-accepting chemotaxis protein DP0985 158 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51244707 Common - hypothetical protein DP0855 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 51245424 Common - hypothetical protein DP1572 11 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 51244676 Common - similar to transcription regulator DP0824 105 COG0640 ArsR, Predicted transcriptional regulators Transcription 51246903 Common - electron transfer flavoprotein, alpha subunit DP3051 158 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 51245375 Nonpathogen - hypothetical protein DP1523 1 None None None 51246443 Common rpmA 50S ribosomal protein L27 DP2591 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 51245514 Common - hypothetical protein DP1662 17 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 51244326 Common - similar to GTP-binding protein DP0474 197 COG1160 COG1160, Predicted GTPases General function prediction only 51245353 Common - similar to transposase DP1501 2 None None None 51244853 Common - hypothetical protein DP1001 78 COG0622 COG0622, Predicted phosphoesterase General function prediction only 51243912 Nonpathogen - hypothetical protein DP0060 1 None None None 51246153 Nonpathogen - hypothetical protein DP2301 1 None None None 51246040 Common - phosphoribosylamine--glycine ligase DP2188 233 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 51246188 Nonpathogen - hypothetical protein DP2336 1 None None None 51244602 Common - two-component system response regulator (Pho family) DP0750 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51244125 Nonpathogen - hypothetical protein DP0273 1 None None None 51244376 Nonpathogen - hypothetical protein DP0524 1 None None None 51244123 Common - molybdopterin biosynthesis protein DP0271 60 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51244016 Common - DNA-3-methyladenine glycosylase I DP0164 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 51244787 Common - cold-shock protein (CspD) DP0935 181 COG1278 CspC, Cold shock proteins Transcription 51246559 Nonpathogen - hypothetical protein DP2707 3 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 51245120 Common - high-affinity branched-chain amino acid ABC transporter, permease protein DP1268 162 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51245897 Nonpathogen - hypothetical protein DP2045 1 None None None 51244075 Common - cobalamin biosynthesis protein (CbiG) DP0223 91 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 51244336 Common - DctM (C4-dicarboxylate permease, large subunit) DP0484 130 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51245389 Common - hypothetical protein DP1537 10 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51243945 Common - similar to histidinol-phosphatase DP0093 33 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 51245075 Nonpathogen - hypothetical protein DP1223 1 None None None 51246448 Common - 30S ribosomal protein S18 DP2596 213 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 51244665 Nonpathogen - hypothetical protein DP0813 1 None None None 51244750 Common - similar to ATP-dependent RNA helicase (RhlE) DP0898 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 51246386 Common - phosphoribosylaminoimidazole synthetase DP2534 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 51245564 Nonpathogen - hypothetical protein DP1712 4 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51245979 Common - hypothetical protein DP2127 31 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 51246661 Common - similar to thymidylate kinase DP2809 236 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 51246599 Common - similar to membrane-bound transport protein DP2747 89 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51244118 Nonpathogen - hypothetical protein DP0266 7 None None None 51244859 Common - UDP-glucose 4-epimerase DP1007 231 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 51246523 Common fliP flagellar biosynthesis protein FliP DP2671 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 51243927 Nonpathogen - hypothetical protein DP0075 1 None None None 51246031 Nonpathogen - hypothetical protein DP2179 1 None None None 51246339 Common - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein DP2487 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51245380 Common - hypothetical protein DP1528 74 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 51246943 Common - hypothetical protein DP3091 68 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 51245032 Common - transposase, fragment DP1180 7 None None None 51244479 Nonpathogen - similar to porin precursor DP0627 3 None None None 51245654 Common - Na(+)-translocating NADH-quinone reductase subunit A DP1802 39 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 51244345 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP0493 80 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51244153 Common - similar to glycine cleavage system, T protein DP0301 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 51244393 Common - aminotransferase DP0541 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 51244623 Common - similar to Na-translocating NADH-quinone reductase, Nqr2 subunit DP0771 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 51246512 Nonpathogen - hypothetical protein DP2660 3 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 161485624 Common - hypothetical protein DP2119 80 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 51245109 Common - hypothetical protein DP1257 6 None None None 51245943 Nonpathogen - hypothetical protein DP2091 1 None None None 51246367 Common - similar to 2-hydroxyglutaryl-CoA dehydratase, beta subunit DP2515 37 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 51245769 Nonpathogen - hypothetical protein DP1917 1 None None None 51245841 Common - hypothetical protein DP1989 5 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 51244759 Common - queuine tRNA-ribosyltransferase DP0907 230 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 51243911 Common - glycolate oxidase subunit (GlcD) DP0059 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 51245789 Common - hypothetical protein DP1937 160 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 51245002 Common - 30S ribosomal protein S11 DP1150 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 51246456 Common - similar to cytosol aminopeptidase DP2604 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 51246494 Common - similar to two-component system sensory/regulatory protein (Che family) DP2642 216 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 51244135 Common - hypothetical protein DP0283 36 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51244133 Common - similar to outer membrane protein DP0281 161 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 51244140 Common - sulfate permease (SulP) DP0288 55 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 51244162 Common - similar to nitroimidazole resistance protein DP0310 28 COG3467 COG3467, Predicted flavin-nucleotide-binding protein General function prediction only 51244486 Common - hypothetical protein DP0634 160 COG0327 COG0327, Uncharacterized conserved protein Function unknown 51243940 Common - similar to glutamine transport system permease protein (GlnP) DP0088 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51244570 Common - hypothetical protein DP0718 6 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 51245743 Common - hypothetical protein DP1891 28 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51245760 Common - endonuclease III DP1908 189 COG2231 COG2231, Uncharacterized protein related to Endonuclease III DNA replication, recombination, and repair 51246004 Nonpathogen - hypothetical protein DP2152 9 None None None 51246668 Common - hypothetical protein DP2816 23 COG2930 COG2930, Uncharacterized conserved protein Function unknown 51244817 Common - DNA polymerase III subunit epsilon DP0965 114 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 51246023 Common - P-protein DP2171 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 51245364 Common - DctM (C4-dicarboxylate permease, large subunit) DP1512 135 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51246439 Common - similar to nicotinate-nucleotide adenylyltransferase DP2587 183 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 51244796 Common - similar to ArsR-family transcription regulator DP0944 146 COG0640 ArsR, Predicted transcriptional regulators Transcription 51245957 Common - hypothetical protein DP2105 162 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 51245621 Common - formate dehydrogenase, selenocysteine-containing chain A DP1769 190 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51244291 Common - acetylglutamate kinase DP0439 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 51246649 Common - similar to ribonuclease D DP2797 121 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 51246407 Common - similar to lipoprotein NlpD/LppB DP2555 180 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 51246920 Common - similar to 4-hydroxybenzoyl-CoA reductase (HcrB) DP3068 62 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 51246313 Nonpathogen - hypothetical protein DP2461 1 None None None 51244387 Common - hypothetical protein DP0535 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 51246171 Common - 2-ketoglutarate oxidoreductase, gamma chain DP2319 56 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 51245413 Nonpathogen - hypothetical protein DP1561 21 COG2403 COG2403, Predicted GTPase General function prediction only 51245780 Common - adenylosuccinate lyase DP1928 204 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 51246550 Nonpathogen - similar to exodeoxyribonuclease VII small subunit DP2698 8 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 51245114 Common - similar to voltage-gated potassium channel DP1262 92 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 51244182 Common - similar to ABC transporter, permease protein DP0330 165 COG4662 TupA, ABC-type tungstate transport system, periplasmic component Coenzyme metabolism 51245937 Common - Na+/H+ antiporter DP2085 32 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 51245624 Common - similar to polyferredoxins DP1772 86 COG1148 HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins Energy production and conversion 51245091 Common - similar to transcriptional regulator protein DP1239 153 COG0583 LysR, Transcriptional regulator Transcription 51244358 Nonpathogen - hypothetical protein DP0506 1 None None None 51244185 Common - hypothetical protein DP0333 13 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51244213 Common - translation initiation factor Sui1 DP0361 86 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 51246332 Nonpathogen - hypothetical protein DP2480 1 None None None 51246135 Common - hypothetical protein DP2283 33 COG2314 XynA, Predicted membrane protein Function unknown 51244718 Nonpathogen - hypothetical protein DP0866 1 None None None 51244494 Common - histidinol-phosphate aminotransferase DP0642 240 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 51246250 Common - elongation factor G DP2398 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 51246766 Common - hypothetical protein DP2914 35 COG0456 RimI, Acetyltransferases General function prediction only 51246314 Nonpathogen - hypothetical protein DP2462 1 None None None 51246830 Common - similar to iron (III) ABC transporter, ATP-binding protein DP2978 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 51246077 Common - hypothetical protein DP2225 9 COG3660 COG3660, Predicted nucleoside-diphosphate-sugar epimerase Cell envelope biogenesis, outer membrane 51246960 Common - hypothetical protein DP3108 13 None None None 51244939 Common - DNA polymerase I DP1087 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 51246240 Common - hypothetical protein DP2388 3 None None None 51245457 Common - pyridoxal phosphate biosynthetic protein DP1605 212 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 51244096 Common - hypothetical protein DP0244 6 None None None 51246303 Nonpathogen - hypothetical protein DP2451 1 None None None 51244847 Common - helicase DP0995 137 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 51246486 Common - similar to ABC-transporter, ATP-binding protein DP2634 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51245864 Common - similar to pore-forming cytotoxin integrase DP2012 52 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51243866 Common - UDP-glucose dehydrogenase DP0014 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 51246284 Nonpathogen - hypothetical protein DP2432 2 None None None 51245018 Nonpathogen - hypothetical protein DP1166 3 None None None 51245993 Common - transposase, fragment DP2141 127 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 51245133 Common - similar to coenzyme PQQ synthesis protein DP1281 149 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 51245604 Common - hypothetical protein DP1752 9 None None None 51245098 Common - hypothetical protein DP1246 160 COG1243 ELP3, Histone acetyltransferase Transcription / Chromatin structure and dynamics 51244806 Common - two-component system sensor histidine kinase (Ntr family) DP0954 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51245853 Nonpathogen - hypothetical protein DP2001 1 None None None 51245875 Nonpathogen - hypothetical protein DP2023 1 None None None 51244065 Nonpathogen - hypothetical protein DP0213 1 None None None 51245904 Nonpathogen - hypothetical protein DP2052 1 None None None 51245799 Common - similar to leucine/isoleucine/valine-binding protein DP1947 99 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51244890 Nonpathogen - hypothetical protein DP1038 1 None None None 51244889 Nonpathogen - hypothetical protein DP1037 1 None None None 51246774 Common - ATP-dependent protease La DP2922 189 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 51244609 Common - hypothetical protein DP0757 46 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 51245556 Common - similar to ComE operon protein 3 DP1704 186 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 51246579 Common - ribosomal protein L31 DP2727 180 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 51244415 Common - similar to ABC transporter, ATP-binding protein DP0563 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51246792 Common - hypothetical protein DP2940 90 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 51244528 Nonpathogen - hypothetical protein DP0676 4 None None None 51245301 Nonpathogen - hypothetical protein DP1449 1 None None None 51246773 Common - ATP-dependent protease La DP2921 205 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 51245909 Nonpathogen - hypothetical protein DP2057 1 None None None 51245131 Common - hypothetical protein DP1279 10 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 51244555 Nonpathogen - hypothetical protein DP0703 1 None None None 51245450 Common - hypothetical protein DP1598 10 None None None 51245292 Common - hypothetical protein DP1440 135 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51245229 Common - hypothetical protein DP1377 13 None None None 51244971 Common rpsL 30S ribosomal protein S12 DP1119 246 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 51246247 Nonpathogen - hypothetical protein DP2395 1 None None None 51244694 Common - hypothetical protein DP0842 58 COG0622 COG0622, Predicted phosphoesterase General function prediction only 51245087 Common - glutamine ABC transporter, ATP-binding protein DP1235 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51246642 Common - 3-oxoacyl-[acyl-carrier protein] reductase DP2790 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51245269 Nonpathogen - hypothetical protein DP1417 1 None None None 51245982 Common - hypothetical protein DP2130 42 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51244824 Common - hypothetical protein DP0972 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51245989 Common - succinate dehydrogenase/fumarate reductase iron-sulfur subunit DP2137 48 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 51245494 Common - similar to GrpE protein (HSP-70 cofactor) DP1642 228 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 51244169 Common - hypothetical protein DP0317 38 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 51246395 Nonpathogen - hypothetical protein DP2543 1 None None None 51245350 Nonpathogen - hypothetical protein DP1498 2 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 51246534 Common - similar to flagellar protein (FlgA) DP2682 14 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 51244053 Common - hypothetical protein DP0201 180 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51246145 Common - hypothetical protein DP2293 15 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 51246967 Common - similar to peptidyl-prolyl cis-trans isomerase (FKBP-type) DP3115 162 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 51244111 Common - amidophosphoribosyltransferase DP0259 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 51246053 Common - similar to 5-methyltetrahydrofolate--homocysteine methyltransferase DP2201 164 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 51244593 Common - 3-oxoacyl-(acyl carrier protein) synthase III DP0741 190 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 51244254 Common - hypothetical protein DP0402 35 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 51244289 Common - ornithine carbamoyltransferase DP0437 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 51244875 Common - hypothetical protein DP1023 102 COG1620 LldP, L-lactate permease Energy production and conversion 51245395 Common - hypothetical protein DP1543 132 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 51244403 Common - hypothetical protein DP0551 9 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 51245550 Common - similar to acriflavine resistance protein E [Precursor] septum formation and cell membrane permeability DP1698 160 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 51246880 Common - ethanolamine utilization protein (EutE) DP3028 129 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51243884 Common - lipopolysaccharide biosynthesis protein (WbpT) DP0032 197 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51246707 Nonpathogen - hypothetical protein DP2855 1 None None None 51244433 Common hynD hydrogenase maturation endopeptidase DP0581 71 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 51245314 Common - similar to PilY1 protein DP1462 31 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 51245855 Common - hypothetical protein DP2003 9 None None None 51244884 Common - similar to putative threonine efflux protein DP1032 87 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 51246606 Nonpathogen - hypothetical protein DP2754 1 None None None 51246957 Nonpathogen - hypothetical protein DP3105 1 None None None 51245115 Common - similar to acetoin utilization protein (AcuB) DP1263 117 COG0517 COG0517, FOG: CBS domain General function prediction only 51244363 Nonpathogen - hypothetical protein DP0511 1 None None None 51244678 Common acs acetyl-coenzyme A synthetase DP0826 172 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 51246245 Nonpathogen - hypothetical protein DP2393 13 None None None 51245686 Nonpathogen - hypothetical protein DP1834 1 None None None 51245208 Common - similar to ferredoxin DP1356 45 COG0778 NfnB, Nitroreductase Energy production and conversion 51245503 Nonpathogen - hypothetical protein DP1651 1 None None None 51246851 Nonpathogen - hypothetical protein DP2999 1 None None None 51244019 Common - hypothetical protein DP0167 177 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 51245106 Nonpathogen - hypothetical protein DP1254 3 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 51246089 Common - hypothetical protein DP2237 93 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 51245227 Common - hypothetical protein DP1375 21 COG2252 COG2252, Permeases General function prediction only 51246255 Common - similar to 3-oxoacyl-[acyl-carrier-protein] synthase DP2403 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246454 Common - tRNA-dihydrouridine synthase DP2602 211 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 51245299 Common - aminotransferase DP1447 232 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 51245713 Common - similar to efflux pump antibiotic resistance protein DP1861 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51245471 Common - anthranilate synthase, component I DP1619 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 51244855 Common - low-specificity L-threonine aldolase DP1003 103 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 51245195 Common - similar to exodeoxyribonuclease V, gamma chain DP1343 66 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 51245239 Common - similar to dipeptidase DP1387 245 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 51244968 Common - 50S ribosomal protein L7 /L12 DP1116 212 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 51244948 Nonpathogen - hypothetical protein DP1096 2 None None None 51246730 Common - similar to folylpolyglutamate synthase DP2878 217 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 51246782 Common - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diamino pimelate ligase DP2930 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 51245072 Nonpathogen - hypothetical protein DP1220 1 None None None 51245404 Common - hypothetical protein DP1552 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51245053 Common - similar to pyruvate synthase, subunit PorB DP1201 121 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 51245201 Nonpathogen - hypothetical protein DP1349 1 None None None 51244010 Common - hypothetical protein DP0158 8 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 51245234 Common - hypothetical protein DP1382 163 COG1162 COG1162, Predicted GTPases General function prediction only 51245984 Common - hypothetical protein DP2132 14 COG0730 COG0730, Predicted permeases General function prediction only 51246894 Common - similar to ethanolamine utilization protein (EutK) DP3042 31 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51244275 Common - hypothetical protein DP0423 8 COG3311 AlpA, Predicted transcriptional regulator Transcription 51246161 Common - hypothetical protein DP2309 181 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51243954 Common - similar to N-terminal acetyltransferase DP0102 59 COG0456 RimI, Acetyltransferases General function prediction only 51245557 Common - similar to 3-deoxy-D-manno-octulosonic-acid transferase DP1705 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 51246028 Nonpathogen - hypothetical protein DP2176 2 None None None 51246223 Common - hypothetical protein DP2371 40 COG3647 COG3647, Predicted membrane protein Function unknown 51245922 Common - hypothetical protein DP2070 163 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 51246879 Common - similar to formate acetyltransferase DP3027 58 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 51244688 Nonpathogen - hypothetical protein DP0836 1 None None None 51244689 Nonpathogen - hypothetical protein DP0837 1 None None None 51246737 Nonpathogen - hypothetical protein DP2885 2 None None None 51246885 Common - similar to propanediol utilization protein (PduS) DP3033 130 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 51244563 Common - L-aspartate oxidase (NadB) DP0711 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 51246634 Common - type 4 fimbrial assembly protein (PilC) DP2782 151 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 51244997 Common secY preprotein translocase subunit SecY DP1145 228 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 51244428 Common hynC Ni/Fe-hydrogenase, cytochrome subunit DP0576 43 COG1969 HyaC, Ni,Fe-hydrogenase I cytochrome b subunit Energy production and conversion 51244203 Nonpathogen - hypothetical protein DP0351 5 None None None 51245242 Common - similar to excinuclease ATPase DP1390 14 None None None 51245580 Common - hypothetical protein DP1728 146 COG2962 RarD, Predicted permeases General function prediction only 51245606 Common - ABC transporter DP1754 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51246891 Common - ethanolamine utilization protein (EutE) DP3039 173 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51245477 Nonpathogen - hypothetical protein DP1625 1 None None None 51245690 Common - hypothetical protein DP1838 13 None None None 51244170 Common - ABC transporter, ATP-binding protein DP0318 249 COG4136 COG4136, ABC-type uncharacterized transport system, ATPase component General function prediction only 51246376 Common - similar to ABC transporter, ATP-binding protein DP2524 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51245862 Common - hypothetical protein DP2010 3 None None None 51246874 Nonpathogen - hypothetical protein DP3022 1 None None None 51245818 Common - DNA mismatch repair protein MutL DP1966 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 51246810 Common - RecA protein DP2958 239 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 51246213 Nonpathogen - hypothetical protein DP2361 4 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51246614 Common - hypothetical protein DP2762 95 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 51244871 Common - hypothetical protein DP1019 183 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 51245211 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP1359 72 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51244573 Nonpathogen - hypothetical protein DP0721 1 None None None 51245547 Nonpathogen - hypothetical protein DP1695 1 None None None 51246593 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein DP2741 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 51246744 Common - hypothetical protein DP2892 59 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51245540 Common - similar to ribonuclease R DP1688 192 COG0557 VacB, Exoribonuclease R Transcription 51245065 Nonpathogen - hypothetical protein DP1213 1 None None None 51243939 Common - similar to AAS bifunctional protein DP0087 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246828 Nonpathogen - hypothetical protein DP2976 2 None None None 51245591 Common thiG thiazole synthase DP1739 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 51246607 Common - ferredoxin III DP2755 52 COG1146 COG1146, Ferredoxin Energy production and conversion 51244663 Nonpathogen - hypothetical protein DP0811 1 None None None 51245323 Common - heavy-metal transporting ATPase DP1471 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 51246695 Common - S-adenosylmethionine:tRNA ribosyltransferase-isomerase DP2843 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 51243924 Common - hypothetical protein DP0072 9 COG5663 COG5663, Uncharacterized conserved protein Function unknown 51244456 Common - similar to ABC transporter, permease protein DP0604 94 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51245881 Nonpathogen - hypothetical protein DP2029 1 None None None 51246849 Nonpathogen - hypothetical protein DP2997 1 None None None 51246583 Common - similar to transcription factor DP2731 84 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 51244477 Common - hypothetical protein DP0625 15 None None None 51246822 Nonpathogen - hypothetical protein DP2970 2 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51246285 Common - similar to exodeoxyribonuclease (partial length) DP2433 5 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 51245974 Common - similar to multidrug-efflux transport protein DP2122 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 51245707 Common - similar to coenzyme PQQ synthesis protein DP1855 131 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 51244179 Common - nitrogen regulatory protein P-II DP0327 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 51243859 Common - elongation factor G DP0007 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 51245260 Common - similar to PROLINE IMINOPEPTIDASE (PIP) DP1408 31 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51246548 Common - ATP-dependent protease peptidase subunit DP2696 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 51245021 Common - hypothetical protein DP1169 3 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 51246126 Nonpathogen - hypothetical protein DP2274 4 None None None 51244956 Common - adenylylsulphate reductase, beta subunit (AprB) DP1104 23 COG1146 COG1146, Ferredoxin Energy production and conversion 51244897 Common - hypothetical protein DP1045 36 COG4237 HyfE, Hydrogenase 4 membrane component (E) Energy production and conversion 51245792 Common - hypothetical protein DP1940 49 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 51244046 Common - rubrerythrin DP0194 79 COG1592 COG1592, Rubrerythrin Energy production and conversion 51244636 Common - similar to DNA polymerase III, delta subunit DP0784 229 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 51245969 Common - similar to thiosulfate sulfurtransferase DP2117 129 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51245157 Nonpathogen - hypothetical protein DP1305 1 None None None 51246789 Common - similar to heat shock protein DnaJ DP2937 101 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 51246121 Nonpathogen - hypothetical protein DP2269 1 None None None 51246360 Nonpathogen - hypothetical protein DP2508 1 None None None 51245145 Nonpathogen - hypothetical protein DP1293 1 None None None 51246560 Common - hypothetical protein DP2708 147 COG1733 COG1733, Predicted transcriptional regulators Transcription 51245373 Common - hypothetical protein DP1521 44 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 51244513 Common - malate dehydrogenase DP0661 163 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 51244421 Common - similar to methyl-accepting chemotaxis protein DP0569 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51243893 Common - hypothetical protein DP0041 8 None None None 51244674 Common - glyceraldehyde 3-phosphate dehydrogenase DP0822 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 51244249 Common - hypothetical protein DP0397 2 None None None 51246291 Common - hypothetical protein DP2439 7 None None None 51246119 Common - hypothetical protein DP2267 93 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 51243879 Nonpathogen - hypothetical protein DP0027 1 None None None 51246714 Common - hypothetical protein DP2862 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 51245670 Common - hypothetical protein DP1818 11 None None None 51244508 Common - hypothetical protein DP0656 7 None None None 51245422 Nonpathogen - hypothetical protein DP1570 1 None None None 51244029 Nonpathogen - hypothetical protein DP0177 1 None None None 51244356 Common - similar to mercuric reductase DP0504 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 51245443 Common - hypothetical protein DP1591 13 None None None 51246276 Nonpathogen - hypothetical protein DP2424 2 None None None 51246927 Nonpathogen - hypothetical protein DP3075 22 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 51245699 Common - 3-oxoacyl-[acyl-carrier protein] reductase DP1847 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51245429 Nonpathogen - hypothetical protein DP1577 1 None None None 51246304 Nonpathogen - hypothetical protein DP2452 1 None None None 51244020 Common queF 7-cyano-7-deazaguanine reductase DP0168 121 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 51244838 Nonpathogen - hypothetical protein DP0986 1 None None None 51245376 Common - similar to methyl-accepting chemotaxis protein DP1524 166 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246901 Common - hypothetical protein DP3049 50 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 51246755 Nonpathogen - hypothetical protein DP2903 1 None None None 51245483 Common - tryptophan synthase subunit beta DP1631 225 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 51246324 Common - phosphoglyceromutase DP2472 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 51244903 Nonpathogen - hypothetical protein DP1051 4 COG2043 COG2043, Uncharacterized protein conserved in archaea Function unknown 51244150 Common - glycine dehydrogenase subunit 2 DP0298 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 51246643 Common - electron transport flavoprotein, alpha-subunit DP2791 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 51244288 Common - argininosuccinate synthase DP0436 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 51244238 Common - hypothetical protein DP0386 56 COG2985 COG2985, Predicted permease General function prediction only 51245033 Nonpathogen - hypothetical protein DP1181 1 None None None 51246862 Common - similar to organic solvent tolerance protein (OstA) DP3010 126 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 51245044 Nonpathogen - hypothetical protein DP1192 1 None None None 51244819 Common - sulfate permease (SulP) DP0967 164 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 51246473 Nonpathogen tatA similar to Sec-independent protein translocase protein TatA DP2621 6 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 51245598 Common - hypothetical protein DP1746 11 None None None 51244006 Common - similar to multidrug resistance protein K DP0154 124 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 51246480 Common - phosphate permease DP2628 170 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 51245899 Nonpathogen - hypothetical protein DP2047 1 None None None 51246507 Common - similar to flagellar hook-basal body complex protein (FliE) DP2655 75 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 51245062 Nonpathogen - similar to S-layer-like array-related protein DP1210 1 None None None 51246415 Nonpathogen - hypothetical protein DP2563 1 None None None 51243872 Common - hypothetical protein DP0020 5 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 51246196 Nonpathogen - hypothetical protein DP2344 1 None None None 51246195 Nonpathogen - hypothetical protein DP2343 1 None None None 51244769 Common - hypothetical protein DP0917 46 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 51243930 Common - hypothetical protein DP0078 31 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 51245344 Common - similar to two-component system response regulator (Ntr family) DP1492 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51244867 Nonpathogen - similar to hydrogenase expression/formation protein (HypA) DP1015 2 COG0375 HybF, Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) General function prediction only 51244031 Common - hypothetical protein DP0179 54 COG3378 COG3378, Predicted ATPase General function prediction only 51246351 Common aroK shikimate kinase DP2499 200 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 51246569 Common - similar to fructose-bisphosphate aldolase DP2717 18 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 51244761 Common - hypothetical protein DP0909 118 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 51244582 Nonpathogen - hypothetical protein DP0730 4 None None None 51243957 Common - dihydroorotase DP0105 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 51243914 Common - hypothetical protein DP0062 81 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 51245015 Common - peptidoglycan acetylation protein (GcpE) DP1163 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 51246678 Common - hypothetical protein DP2826 13 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 51245432 Common - hypothetical protein DP1580 33 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 51246465 Common infB translation initiation factor IF-2 DP2613 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 51244449 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP0597 101 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51246071 Common - similar to lipopolysaccharide core biosynthesis glycosyl transferase (KdtX) DP2219 121 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51244723 Nonpathogen - hypothetical protein DP0871 1 None None None 51245618 Common - similar to molybdopterin-guanine dinucleotide biosynthesis protein B DP1766 95 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 51246201 Common - similar to amino acid transport protein (partial length) DP2349 7 None None None 51245277 Common rplT 50S ribosomal protein L20 DP1425 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 51245767 Common - similar to methylmalonate-semialdehyde dehydrogenase DP1915 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51244921 Common - hypothetical protein DP1069 63 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 51244572 Nonpathogen - hypothetical protein DP0720 9 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 51246572 Common - hypothetical protein DP2720 83 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 51246741 Common - similar to two-component system response regulator (Che family) DP2889 191 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 51245641 Nonpathogen - hypothetical protein DP1789 1 None None None 51245834 Common - glutamine ABC-transporter, periplasmic substrate-binding protein (GlnH) DP1982 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51246803 Common - hypothetical protein DP2951 188 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51244251 Nonpathogen - similar to transposase (partial length) DP0399 2 None None None 51245309 Common - similar to fimbrial biogenesis protein DP1457 16 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 51244453 Common - two-component system sensor histidine kinase (Pho family) DP0601 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51244482 Nonpathogen - hypothetical protein DP0630 1 None None None 51245866 Nonpathogen - hypothetical protein DP2014 3 COG1403 McrA, Restriction endonuclease Defense mechanisms 51245163 Common - NADH dehydrogenase, subunit 4 DP1311 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 51244829 Nonpathogen - hypothetical protein DP0977 1 None None None 51245294 Common - similar to oligopeptidase DP1442 89 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 51244550 Nonpathogen - hypothetical protein DP0698 1 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 51244752 Common - DNA-binding protein HU DP0900 201 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 51245755 Common aat leucyl/phenylalanyl-tRNA--protein transferase DP1903 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 51245302 Nonpathogen - hypothetical protein DP1450 1 None None None 51245831 Nonpathogen - hypothetical protein DP1979 12 None None None 51243860 Nonpathogen - hypothetical protein DP0008 1 None None None 51245352 Common - similar to transcription regulator DP1500 136 COG1802 GntR, Transcriptional regulators Transcription 51244553 Common - 3,4-dihydroxy-2-butanone 4-phosphate synthase DP0701 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 51245173 Common - NADH dehydrogenase, subunit 3 DP1321 38 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 51245362 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP1510 97 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51243993 Nonpathogen - hypothetical protein DP0141 1 None None None 51246137 Common - hypothetical protein DP2285 33 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 51246342 Common - high-affinity branched-chain amino acid ABC-transporter, periplasmic substrate-binding protein [Precursor] DP2490 135 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51245733 Common - similar to phosphate ABC transporter, periplasmic binding protein DP1881 112 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 51245458 Common - phosphate starvation-induced protein DP1606 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 51245572 Common - chloramphenicol acetyltransferase DP1720 131 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 51246700 Common - similar to protein-tyrosine phosphatase DP2848 46 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 51244051 Nonpathogen - hypothetical protein DP0199 2 None None None 51244081 Nonpathogen - hypothetical protein DP0229 1 None None None 51245482 Common trpA tryptophan synthase subunit alpha DP1630 217 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 51246684 Nonpathogen - similar to thioredoxin/glutaredoxin DP2832 1 None None None 51245034 Common - similar to choloylglycine hydrolase DP1182 55 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 51245871 Nonpathogen - hypothetical protein DP2019 1 None None None 51244655 Nonpathogen - hypothetical protein DP0803 1 None None None 51244099 Common - similar to serine protease DP0247 55 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 51245599 Common - hypothetical protein DP1747 7 None None None 51245988 Common sdhA succinate dehydrogenase flavoprotein subunit DP2136 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 51246088 Common - hypothetical protein DP2236 134 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 51245734 Common - phosphate ABC transporter, permease protein (PstA) DP1882 228 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51246349 Common - similar to cAMP-dependent protein kinase DP2497 10 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51246318 Common - similar to ethanolamine utilization protein DP2466 159 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51246078 Common - type IV pilus assembly protein (TapB) DP2226 214 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 51245451 Common - similar to soluble lytic murein transglycosylase precursor DP1599 12 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 51244364 Common - similar to outer membrane (agglutination) protein DP0512 129 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51244378 Common - similar to ATP-dependent dsDNA exonuclease (SBCC) DP0526 200 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 51244072 Common - cobalamin biosynthesis protein (CbiD) DP0220 95 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 51245436 Common - hypothetical protein DP1584 11 None None None 51246038 Common - L-serine dehydratase DP2186 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 51243906 Nonpathogen - hypothetical protein DP0054 1 None None None 51246557 Common - similar to methyl-accepting chemotaxis protein DP2705 159 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245063 Common - similar to outer membrane porin F [Precursor] DP1211 149 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 51244258 Common - ATP-dependent DNA helicase DP0406 223 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 51245895 Common - hypothetical protein DP2043 3 None None None 51246269 Common - similar to penicillin-binding protein 1B DP2417 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 51246264 Common - similar to TolB protein [Precursor] DP2412 154 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 51244113 Nonpathogen - hypothetical protein DP0261 1 None None None 51245168 Common - similar to NADH dehydrogenase, subunit 8 DP1316 191 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 51246056 Common - hypothetical protein DP2204 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 51244872 Common - hypothetical protein DP1020 70 COG1556 COG1556, Uncharacterized conserved protein Function unknown 51245238 Common - glycine-betaine transporter (OpuD) DP1386 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 51246962 Common - hypothetical protein DP3110 189 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 51243905 Common - endonuclease IV DP0053 98 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 51245816 Nonpathogen - hypothetical protein DP1964 2 None None None 51244716 Nonpathogen - hypothetical protein DP0864 7 None None None 51245252 Nonpathogen - hypothetical protein DP1400 1 None None None 51245592 Common thiH thiamine biosynthesis protein ThiH DP1740 56 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 51244963 Nonpathogen - similar to preprotein translocase secE subunit (partial length) DP1111 5 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 51244826 Common - hypothetical protein DP0974 100 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 51245720 Common - NADH-dependent alcohol dehydrogenase DP1868 168 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 51244597 Common - immunogenic protein DP0745 86 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 51246514 Common - similar to polar flagellar hook-length control protein (FliK) DP2662 22 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 51244720 Common - hypothetical protein DP0868 12 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 51245255 Nonpathogen - hypothetical protein DP1403 1 None None None 51243869 Common - O-antigen acetylase DP0017 82 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 51246396 Common bioD dithiobiotin synthetase DP2544 157 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 51246241 Common - hypothetical protein DP2389 16 COG4628 COG4628, Uncharacterized conserved protein Function unknown 51246058 Common - similar to primosomal protein N' (PriA) DP2206 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 51243864 Common - hypothetical protein DP0012 44 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 51245398 Common - similar to 5'-methylthioadenosine/S-adenosylhomocysteine nuclosidase DP1546 92 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 51245382 Common - secretory protein kinase DP1530 163 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 51246689 Common - similar to cobalt-zinc-cadmium resistance protein (CzcA) DP2837 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 51246867 Common - dihydroorotate dehydrogenase, catalytic subunit DP3015 196 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 51244531 Common - sugar ABC transporter, permease protein DP0679 108 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 51246311 Nonpathogen - hypothetical protein DP2459 3 None None None 51246275 Common - similar to penicillin-binding protein (PbpA) DP2423 206 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51246778 Common - mannose-1-phosphate guanylyltransferase DP2926 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 51244776 Common - hypothetical protein DP0924 38 COG0778 NfnB, Nitroreductase Energy production and conversion 51246852 Nonpathogen - hypothetical protein DP3000 1 None None None 51245096 Common - similar to peroxisomal targeting signal type 1 receptor DP1244 85 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 51245068 Nonpathogen - hypothetical protein DP1216 1 None None None 51244561 Common - similar to nitrogen fixation protein (AnfA) DP0709 175 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 51244058 Common - glycine betaine/L-proline transport ATP-binding protein (ProV) DP0206 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 51246352 Common - hypothetical protein DP2500 22 None None None 51244063 Common - precorrin-2 C20-methyltransferase (CobI) DP0211 97 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 51245368 Common - adenine phosphoribosyltransferase DP1516 39 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 51243888 Common - similar to galactoside O-acetyltransferase DP0036 167 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 51244315 Common - hypothetical protein DP0463 10 COG2014 COG2014, Uncharacterized conserved protein Function unknown 51246033 Nonpathogen - hypothetical protein DP2181 1 None None None 51246236 Common - similar to undecaprenol kinase (bacitracin resistance protein) DP2384 192 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 51246011 Common - L-lysine 2,3-aminomutase DP2159 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 51246946 Nonpathogen - hypothetical protein DP3094 1 None None None 51246594 Common cls cardiolipin synthetase DP2742 151 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 51246813 Nonpathogen - hypothetical protein DP2961 1 None None None 51244463 Common - hypothetical protein DP0611 5 None None None 51246933 Common - similar to siroheme synthase DP3081 36 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 51244973 Common - translation elongation factor EF-G DP1121 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 51245627 Common - similar to leucine/isoleucine/valine-binding protein [precursor] DP1775 114 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51245962 Common - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein DP2110 153 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 51246051 Common - similar to proteinase IV DP2199 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51244390 Common - hypothetical protein DP0538 170 COG0344 COG0344, Predicted membrane protein Function unknown 51246840 Common - formate dehydrogenase, gamma subunit DP2988 66 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 51245840 Nonpathogen - hypothetical protein DP1988 1 None None None 51244474 Common - hypothetical protein DP0622 49 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 51246460 Common - polynucleotide phosphorylase/polyadenylase DP2608 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 51245843 Common - hypothetical protein DP1991 16 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 51246007 Nonpathogen - ferredoxin-thioredoxin reductase DP2155 17 COG4802 FtrB, Ferredoxin-thioredoxin reductase, catalytic subunit Energy production and conversion 51245622 Nonpathogen - hypothetical protein DP1770 1 None None None 51245644 Common - similar to chemotaxis protein methyltransferase (CheR) DP1792 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 51246433 Common - similar to cytoplasmic axial filament protein (ribonuclease G) DP2581 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 161485629 Common - cobalt transport protein CbiM DP0760 79 COG0310 CbiM, ABC-type Co2+ transport system, permease component Inorganic ion transport and metabolism 51244630 Common - isocitrate dehydrogenase DP0778 67 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 51245385 Common - hypothetical protein DP1533 8 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 51245727 Common - glycine/serine hydroxymethyltransferase (GlyA) DP1875 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 51245939 Common - Na+/H+ antiporter regulatory protein (NhaR) DP2087 153 COG0583 LysR, Transcriptional regulator Transcription 51245138 Common - sodium/alanine symporter DP1286 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 51246081 Common - cysteine desulfurase (NifS) DP2229 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 51246112 Common - similar to Mn2+ and Fe2+ transporters of the NRAMP family DP2260 106 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 51245923 Common - hypothetical protein DP2071 130 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51245500 Nonpathogen - similar to 3Fe-4S ferredoxins DP1648 3 COG1141 Fer, Ferredoxin Energy production and conversion 51245806 Common - hypothetical protein DP1954 131 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 51245476 Nonpathogen - hypothetical protein DP1624 2 None None None 51244287 Common - argininosuccinate lyase DP0435 226 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 51244737 Common - histidine triad nucleotide-binding protein (HIT) DP0885 232 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 51244930 Nonpathogen - hypothetical protein DP1078 1 None None None 51245419 Nonpathogen - hypothetical protein DP1567 1 None None None 51244643 Common - hypothetical protein DP0791 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 51244732 Common - hypothetical protein DP0880 53 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 51244241 Common - hypothetical protein DP0389 3 None None None 51246042 Common - hypothetical protein DP2190 13 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51246472 Nonpathogen tatE similar to Sec-independent protein translocase protein TatE DP2620 5 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 51245478 Common - hypothetical protein DP1626 5 None None None 51244595 Common - hypothetical protein DP0743 5 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 51243978 Common - similar to Xaa-Pro dipeptidase DP0126 247 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 51246409 Nonpathogen - hypothetical protein DP2557 1 None None None 51244746 Common - dihydroxy-acid dehydratase DP0894 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 51244152 Common - glycine cleavage system, H protein DP0300 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 51246406 Common - similar to cell division protein (FtsX) DP2554 111 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 51246048 Common - hypothetical protein DP2196 84 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 51246181 Common - hypothetical protein DP2329 34 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 51244221 Common - similar to sigma factor SigB regulation protein (RsbU) DP0369 110 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 51244395 Nonpathogen - hypothetical protein DP0543 1 None None None 51245001 Common rpsM 30S ribosomal protein S13 DP1149 229 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 51245412 Common - amino acid ABC transporter, permease protein DP1560 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51245676 Common pflC similar to pyruvate formate-lyase activating enzyme DP1824 71 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 51246065 Common - hypothetical protein DP2213 83 COG0391 COG0391, Uncharacterized conserved protein Function unknown 51244160 Common - similar to serine proteinase DP0308 221 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 51244704 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA DP0852 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 51245562 Common - hypothetical protein DP1710 33 COG2006 COG2006, Uncharacterized conserved protein Function unknown 51246292 Nonpathogen - hypothetical protein DP2440 1 None None None 51245942 Nonpathogen - hypothetical protein DP2090 2 COG0456 RimI, Acetyltransferases General function prediction only 51244180 Common - similar to MTA/SAH nucleosidase DP0328 63 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 51245569 Nonpathogen - hypothetical protein DP1717 1 None None None 51246726 Common - hypothetical protein DP2874 90 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51244328 Common thiH thiamine biosynthesis protein ThiH DP0476 57 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 51245931 Nonpathogen - hypothetical protein DP2079 1 None None None 51244856 Common - hypothetical protein DP1004 78 COG1284 COG1284, Uncharacterized conserved protein Function unknown 51244389 Common - hypothetical protein DP0537 72 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 51244514 Common - hypothetical protein DP0662 31 COG4807 COG4807, Uncharacterized protein conserved in bacteria Function unknown 51245016 Common - prolyl-tRNA synthetase DP1164 246 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51246097 Nonpathogen - hypothetical protein DP2245 4 None None None 51245213 Common - similar to tyrosine-specific transport protein DP1361 29 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 51245222 Common - hypothetical protein DP1370 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 51245582 Common - hypothetical protein DP1730 130 COG0824 FcbC, Predicted thioesterase General function prediction only 51244625 Common - SoxR-reducing system protein RsxE DP0773 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 51244041 Nonpathogen - hypothetical protein DP0189 3 None None None 51246155 Common - hypothetical protein DP2303 19 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 51244024 Nonpathogen - hypothetical protein DP0172 1 None None None 51244725 Common - hypothetical protein DP0873 90 COG0348 NapH, Polyferredoxin Energy production and conversion 51245949 Common - acetyl-CoA synthetase DP2097 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 51245990 Common - similar to dehydrogenase (flavoproteins) DP2138 122 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 51244604 Common - similar to two-component system sensor histidine kinase (Pho family) DP0752 205 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51244217 Common - hypothetical protein DP0365 123 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51244498 Common - 5-formyltetrahydrofolate cyclo-ligase DP0646 25 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 51244294 Common - RNA polymerase sigma-54 factor DP0442 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 51246616 Common - hypothetical protein DP2764 44 COG2121 COG2121, Uncharacterized protein conserved in bacteria Function unknown 51244902 Nonpathogen - hypothetical protein DP1050 1 None None None 51244303 Common - aspartate kinase DP0451 116 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 51244525 Common - uracil permease DP0673 118 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 51243929 Common - hypothetical protein DP0077 83 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51246299 Common - similar to McbG protein DP2447 44 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 51244146 Nonpathogen - hypothetical protein DP0294 1 None None None 51246941 Nonpathogen - hypothetical protein DP3089 2 COG3784 COG3784, Uncharacterized protein conserved in bacteria Function unknown 51246496 Common - similar to two-component system response regulator (Che family) DP2644 216 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 51245329 Common - similar to heme biosynthesis protein DP1477 135 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 51244199 Common - permease of the major facilitator superfamily DP0347 23 None None None 51245952 Common - hypothetical protein DP2100 22 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 51246400 Common - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (BioA) DP2548 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 51245774 Common - hypothetical protein DP1922 45 None None None 51246715 Common - hypothetical protein DP2863 27 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 51245184 Common - similar to 2-heptaprenyl-1,4-naphthoquinone methyltransferase DP1332 215 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51245077 Common - hydroxylamine reductase DP1225 74 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 51246806 Nonpathogen - hypothetical protein DP2954 1 None None None 51245910 Common - similar to chloramphenicol acetyltransferase DP2058 22 COG4845 COG4845, Chloramphenicol O-acetyltransferase Defense mechanisms 51245523 Common - heat shock protein HtpX DP1671 189 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 51245014 Common - similar to glycoprotein endopeptidase DP1162 169 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 51245220 Common - pyruvate phosphate dikinase DP1368 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 51245370 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP1518 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246338 Common - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein DP2486 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51246751 Common - similar to UDP-N-acetylmuramoylalanine-D-glutamate ligase DP2899 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 51245563 Common - septum formation protein Maf DP1711 197 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 51245288 Common - amino acid ABC transporter, permease protein DP1436 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51244354 Common - hypothetical protein DP0502 124 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51245631 Common - hypothetical protein DP1779 12 None None None 51246095 Common - hypothetical protein DP2243 71 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 51246549 Nonpathogen - hypothetical protein DP2697 1 None None None 51243878 Common - UDP-glucose 4-epimerase DP0026 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 51246757 Common - hypothetical protein DP2905 124 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 51244583 Nonpathogen - hypothetical protein DP0731 1 None None None 51246542 Common - similar to flagellar hook-associated protein 3 (FlgL) DP2690 98 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 51245272 Nonpathogen - hypothetical protein DP1420 1 None None None 51244497 Common - similar to two-component system response regulator (Ntr family) DP0645 225 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51245999 Common - oxidoreductase DP2147 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 51244542 Nonpathogen - hypothetical protein DP0690 2 None None None 51245140 Common - hypothetical protein DP1288 12 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51244177 Nonpathogen - hypothetical protein DP0325 1 None None None 51246198 Nonpathogen - hypothetical protein DP2346 2 None None None 51244196 Common nrfA cytochrome c nitrite reductase DP0344 40 COG3303 NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit Inorganic ion transport and metabolism 51244869 Common - hypothetical protein DP1017 12 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51245529 Common - similar to pheromone shutdown protein TraB DP1677 38 COG1916 COG1916, Uncharacterized homolog of PrgY (pheromone shutdown protein) Function unknown 51244104 Common - naphthoate synthase DP0252 178 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 51245189 Common - hypothetical protein DP1337 5 None None None 51245059 Common - similar to peptide ABC-transporter, permease protein DP1207 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51246428 Common - DNA photolyase DP2576 41 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 51245522 Common - ferritin DP1670 84 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 51245445 Common - hypothetical protein DP1593 10 None None None 51246908 Common - transcriptional regulatory protein (HydG) DP3056 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51245283 Common - similar to DNA polymerase III, subunit gamma/tau DP1431 242 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 51245460 Common - hypothetical protein DP1608 4 None None None 51243937 Common - similar to D-alanine aminotransferase DP0085 200 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 51246969 Common - hypothetical protein DP3117 142 COG2081 COG2081, Predicted flavoproteins General function prediction only 51244904 Common - similar to putative threonine efflux protein DP1052 125 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 51244512 Common - putative alpha-isopropylmalate/homocitrate synthase family transferase DP0660 212 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 51244533 Common - sugar ABC transporter, ATP-binding protein DP0681 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 51246847 Common - hypothetical protein DP2995 3 None None None 51245898 Nonpathogen - hypothetical protein DP2046 2 None None None 51245611 Nonpathogen - hypothetical protein DP1759 1 None None None 51245555 Common - similar to heat shock protein DnaJ (Hsp40) DP1703 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 51246916 Common - hypothetical protein DP3064 69 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 51246418 Nonpathogen - hypothetical protein DP2566 1 None None None 51245496 Common - tryptophanyl-tRNA synthetase DP1644 243 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51244447 Common - DctM (C4-dicarboxylate permease, large subunit) DP0595 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51245149 Common - hypothetical protein DP1297 10 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 51245915 Common - hypothetical protein DP2063 34 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 51244932 Common - rod shape-determining protein (MreB) DP1080 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 51246274 Common - hypothetical protein DP2422 105 COG1262 COG1262, Uncharacterized conserved protein Function unknown 51244506 Nonpathogen - hypothetical protein DP0654 1 None None None 51245178 Common - 30S ribosomal protein S9 DP1326 241 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 51246366 Common - similar to 2-hydroxyglutaryl-CoA dehydratase, alpha subunit DP2514 64 COG1924 COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Lipid metabolism 51244266 Common - hypothetical protein DP0414 14 COG3972 COG3972, Superfamily I DNA and RNA helicases General function prediction only 51245155 Nonpathogen - hypothetical protein DP1303 1 None None None 51245587 Nonpathogen - hypothetical protein DP1735 1 None None None 51245171 Common - NADH dehydrogenase, subunit 9 DP1319 173 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 51244216 Common - hypothetical protein DP0364 121 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51244346 Nonpathogen - hypothetical protein DP0494 3 None None None 51244910 Nonpathogen - hypothetical protein DP1058 1 None None None 51244566 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B DP0714 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 51246187 Nonpathogen - hypothetical protein DP2335 2 None None None 51244774 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase DP0922 103 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 51246604 Common - arginyl-tRNA synthetase DP2752 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51246758 Nonpathogen - hypothetical protein DP2906 1 None None None 51246383 Common coxL similar to aerobic-type carbon monoxide dehydrogenase, large subunit DP2531 120 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 51245113 Common - hypothetical protein DP1261 112 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 51245420 Nonpathogen - hypothetical protein DP1568 1 None None None 51244958 Nonpathogen - heterodisulfide reductase, subunit A (HdrA) DP1106 35 COG1148 HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins Energy production and conversion 51246331 Nonpathogen - hypothetical protein DP2479 1 None None None 51244321 Common - similar to two-component system sensor histidine kinase (Cit family) DP0469 179 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51244088 Common - hypothetical protein DP0236 23 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 51245225 Common - similar to adenine deaminase DP1373 82 COG1001 AdeC, Adenine deaminase Nucleotide transport and metabolism 51245136 Common - 3-isopropylmalate dehydrogenase DP1284 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 51246320 Common - similar to indigoidine systhesis protein DP2468 173 COG0546 Gph, Predicted phosphatases General function prediction only 51246864 Common - shikimate 5-dehydrogenase DP3012 225 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 51245427 Nonpathogen - hypothetical protein DP1575 2 None None None 51245377 Common - hypothetical protein DP1525 7 COG4127 COG4127, Uncharacterized conserved protein Function unknown 51245085 Common - bifunctional glutamate--cysteine ligase/glutathione synthetase DP1233 97 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 51244767 Common - hypothetical protein DP0915 24 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 51243891 Common - similar to O-antigen transporter DP0039 35 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 51243982 Common - ATP-dependent protease La DP0130 203 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 51245811 Common - similar to two-component system response regulator (Ntr family) DP1959 174 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245665 Common - similar to acetyl-coenzyme A carboxylase (fusion of alpha and beta subunit) DP1813 175 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 51243856 Common - hypothetical protein DP0004 60 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 51246648 Nonpathogen - hypothetical protein DP2796 11 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 51245249 Common - branched-chain amino acid transport protein DP1397 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 51244672 Common - similar to ribosomal large subunit pseudouridine synthase B DP0820 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 51246833 Common - similar to TonB dependent outer membrane receptor DP2981 125 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 51246821 Common - hypothetical protein DP2969 26 COG2014 COG2014, Uncharacterized conserved protein Function unknown 51245246 Common - similar to putrescine ABC transporter, ATP-binding protein (PotG) DP1394 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51246411 Common - hypothetical protein DP2559 3 None None None 51246505 Common - similar to flagellar basal-body rod protein (FlgB) DP2653 94 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 51244285 Common dapF diaminopimelate epimerase DP0433 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 51245692 Common - similar to 3-oxoacyl-[acyl-carrier-protein] synthase DP1840 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244026 Common - hypothetical protein DP0174 11 None None None 51246024 Common - molybdenum cofactor biosynthesis protein A (MoaA) DP2172 201 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 51246686 Common - similar to RuBisCO operon transcriptional regulator DP2834 177 COG0583 LysR, Transcriptional regulator Transcription 51245593 Common - similar to bifunctional purine biosynthesis protein (PurH) DP1741 218 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 51245240 Common - diaminopropionate ammonia-lyase DP1388 89 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 51246601 Common - hypothetical protein DP2749 15 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 51246217 Common - acid phosphatase DP2365 40 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 51246467 Common - hypothetical protein DP2615 176 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 51246326 Common - similar to molybdenum cofactor biosynthesis protein (MoeA) DP2474 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51245659 Common - Na(+)-translocating NADH-quinone reductase subunit F DP1807 165 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 51245863 Nonpathogen - hypothetical protein DP2011 2 None None None 51245981 Common - hypothetical protein DP2129 97 COG0701 COG0701, Predicted permeases General function prediction only 51246423 Nonpathogen - hypothetical protein DP2571 1 None None None 51246636 Nonpathogen - hypothetical protein DP2784 1 None None None 51245975 Common - similar to multidrug-efflux transport protein A precursor DP2123 178 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 51244070 Common - cobyrinic acid A,C-diamide synthase (CobB) DP0218 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 51246167 Common - hypothetical protein DP2315 89 COG1262 COG1262, Uncharacterized conserved protein Function unknown 51245538 Nonpathogen - hypothetical protein DP1686 4 None None None 51245883 Nonpathogen - hypothetical protein DP2031 1 None None None 51245434 Common - similar to portal protein GPB of phage lambda DP1582 38 COG5511 COG5511, Bacteriophage capsid protein General function prediction only 51246229 Common thiH thiamine biosynthesis protein ThiH DP2377 60 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 51246160 Nonpathogen - hypothetical protein DP2308 1 None None None 51245700 Nonpathogen - hypothetical protein DP1848 2 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244426 Common hynB Ni/Fe-hydrogenase, small subunit DP0574 77 COG1740 HyaA, Ni,Fe-hydrogenase I small subunit Energy production and conversion 51243961 Common - similar to fimbrial assembly protein PilN DP0109 32 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 51246826 Common - similar to transport protein TolQ DP2974 93 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 51246897 Common - ethanolamine utilization protein, (EutM) DP3045 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51243947 Common - hypothetical protein DP0095 29 COG2259 COG2259, Predicted membrane protein Function unknown 51244983 Common rplP 50S ribosomal protein L16 DP1131 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 51245874 Nonpathogen - hypothetical protein DP2022 5 None None None 51246211 Common - similar to purine-binding chemotaxis protein DP2359 91 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 51246413 Nonpathogen - hypothetical protein DP2561 1 None None None 51244472 Common - similar to glycosyl transferase DP0620 224 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51244606 Common - phospho-2-dehydro-3-deoxyheptonate aldolase DP0754 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 51246248 Common - hypothetical protein DP2396 29 COG2731 EbgC, Beta-galactosidase, beta subunit Carbohydrate transport and metabolism 51245827 Common - similar to acyl carrier protein phosphodiesterase DP1975 95 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 51246654 Common - similar to 16S rRNA processing protein RimM DP2802 150 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 51246872 Common - hypothetical protein DP3020 4 None None None 51244485 Common - hypothetical protein DP0633 30 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 51246735 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP2883 219 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246394 Nonpathogen - hypothetical protein DP2542 1 None None None 51246224 Nonpathogen - hypothetical protein DP2372 1 COG1041 COG1041, Predicted DNA modification methylase DNA replication, recombination, and repair 51246354 Common - phosphoribosylamidoimidazole-succinocarboxamide synthase DP2502 179 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 51244785 Common - cold shock protein DP0933 180 COG1278 CspC, Cold shock proteins Transcription 51244687 Common - ATP synthase, epsilon chain (AtpE) DP0835 176 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 51246697 Common - hypothetical protein DP2845 81 COG1738 COG1738, Uncharacterized conserved protein Function unknown 51245967 Nonpathogen - hypothetical protein DP2115 1 None None None 51244465 Common - hypothetical protein DP0613 18 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 51244883 Common - amino acid ABC transporter, periplasmic substrate-binding protein DP1031 165 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51243952 Common - triosephosphate isomerase DP0100 219 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 51244754 Common - inosine-5'-monophosphate dehydrogenase DP0902 242 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 51246457 Common - hypothetical protein DP2605 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 51246173 Common - 2-oxoglutarate ferredoxin oxidoreductase subunit alpha DP2321 121 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51246620 Common - 2-isopropylmalate synthase DP2768 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 51244206 Nonpathogen - hypothetical protein DP0354 2 None None None 51246374 Common - hypothetical protein DP2522 12 None None None 51244334 Common - similar to sigma54-dependent transcriptional regulator DP0482 177 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51245960 Common - similar to ATP-binding secretion protein DP2108 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 51246589 Common - similar to glutamyl-tRNA synthetase DP2737 246 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 51246580 Common rho transcription termination factor Rho DP2728 212 COG1158 Rho, Transcription termination factor Transcription 51246892 Common - similar to ethanolamine utilization protein (EutN) DP3040 33 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51244362 Nonpathogen - hypothetical protein DP0510 1 None None None 51244094 Common - hypothetical protein DP0242 18 None None None 51245346 Common - hypothetical protein DP1494 22 COG0456 RimI, Acetyltransferases General function prediction only 51245531 Nonpathogen - hypothetical protein DP1679 3 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 51244400 Nonpathogen - hypothetical protein DP0548 1 None None None 51246450 Common - similar to 50S ribosomal protein L9 DP2598 215 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 51246709 Common - similar to metal-dependent aminohydrolase DP2857 164 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 51246627 Nonpathogen - hypothetical protein DP2775 1 None None None 51246590 Common - glutaminyl-tRNA synthetase DP2738 238 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 51245546 Common - twitching mobility protein DP1694 200 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 51244451 Common - hypothetical protein DP0599 177 COG1496 COG1496, Uncharacterized conserved protein Function unknown 51246882 Common - ethanolamine utilization protein (EutM) DP3030 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51246016 Common - aminopeptidase N DP2164 159 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 51245575 Common - hypothetical protein DP1723 42 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 51246690 Common - similar to quinolone resistance protein (NorA) DP2838 236 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51244924 Common - hypothetical protein DP1072 40 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 51245147 Nonpathogen - hypothetical protein DP1295 1 None None None 51244369 Common - hypothetical protein DP0517 174 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 51243886 Common - transposase DP0034 14 None None None 51244270 Common - hypothetical protein DP0418 8 None None None 51245709 Common - hypothetical protein DP1857 89 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 51244876 Common - two-component system response regulator (Ntr family) DP1024 214 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245465 Common - heat shock protein Hsp15 DP1613 103 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 51244891 Common - hypothetical protein DP1039 37 COG0401 COG0401, Uncharacterized homolog of Blt101 Function unknown 51245684 Common - hypothetical protein DP1832 6 None None None 51246775 Common - bifunctional GlmU protein DP2923 198 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 51245718 Common - similar to low molecular weight heat shock protein (Hsp17) DP1866 155 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 51244696 Common - hypothetical protein DP0844 30 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51246521 Common - flagellar motor switch protein (FliN) DP2669 125 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 51245206 Common - similar to 5'-nucleotidase DP1354 30 None None None 51244015 Common - sulfate permease (SulP) DP0163 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 51245197 Common - similar to exodeoxyribonuclease V, alpha chain DP1345 128 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 51245324 Common - sulfate adenylyltransferase DP1472 63 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 51245886 Common - modification methylase DP2034 125 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 51244814 Common - similar to methyl-accepting chemotaxis protein DP0962 160 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246767 Common - glucosamine-fructose-6-phosphate aminotransferase DP2915 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 51246739 Nonpathogen - hypothetical protein DP2887 10 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 51245652 Common - hypothetical protein DP1800 90 COG0730 COG0730, Predicted permeases General function prediction only 51245406 Common - similar to two-component system response regulator (Che family) DP1554 209 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 51244574 Common - orotidine 5'-phosphate decarboxylase DP0722 168 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 51246104 Nonpathogen - hypothetical protein DP2252 1 None None None 51245711 Common - similar to 3-oxoacyl-[acyl-carrier-protein] synthase I DP1859 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244431 Common hypD hydrogenase accessory protein HypD DP0579 108 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 51246191 Common - hypothetical protein DP2339 6 None None None 51244599 Common - methionyl-tRNA formyltransferase DP0747 224 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 51246777 Common - phosphomannomutase DP2925 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 51245601 Common - similar to glycosyltransferase DP1749 197 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51246964 Common - hypothetical protein DP3112 40 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 51244952 Common - riboflavin biosynthesis protein (RibA) DP1100 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 51243854 Common - hypothetical protein DP0002 18 COG3359 COG3359, Predicted exonuclease DNA replication, recombination, and repair 51245694 Common - hypothetical protein DP1842 6 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 51244590 Common - similar to peptidoglycan-associated lipoprotein precursor DP0738 150 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 51244878 Nonpathogen - hypothetical protein DP1026 1 None None None 51246645 Common - 3-oxoacyl-[acyl-carrier-protein] synthase III DP2793 230 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 51244079 Nonpathogen - hypothetical protein DP0227 1 None None None 51244810 Common - ferrous iron transport protein B DP0958 186 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 51243903 Nonpathogen - hypothetical protein DP0051 1 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 51246141 Common - hypothetical protein DP2289 31 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 51246379 Common - hypothetical protein DP2527 16 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51246262 Common - similar to biopolymer transport protein (TolR) DP2410 129 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 51244959 Nonpathogen - fusion protein of heterodisulfide reductase, subunit A (HdrA) and hydrogenase, delta subunit (HydD) DP1107 38 COG1148 HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins Energy production and conversion 51246054 Common - similar to 5-methyltetrahydrofolate--homocysteine methyltransferase DP2202 169 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 51244608 Common - ABC transporter, ATP-binding protein DP0756 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 51245502 Common - hypothetical protein DP1650 133 COG0398 COG0398, Uncharacterized conserved protein Function unknown 51246728 Common - similar to ribonuclease BN DP2876 81 COG1295 Rbn, Predicted membrane protein Function unknown 51244189 Common - transcription regulator (HydG) DP0337 178 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51244961 Common - elongation factor Tu DP1109 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 51244820 Common - hypothetical protein DP0968 24 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 51244960 Common - heterodisulfide reductase, subunit E (HdrE) DP1108 43 COG1150 HdrC, Heterodisulfide reductase, subunit C Energy production and conversion 51244284 Common - dihydrodipicolinate synthase DP0432 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 51243920 Nonpathogen - hypothetical protein DP0068 3 None None None 51246243 Common - two-component system sensory/regulatory protein (Ntr family) DP2391 225 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51245094 Common - hypothetical protein DP1242 73 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51243862 Nonpathogen - hypothetical protein DP0010 1 None None None 51246073 Common - glucose-1-phosphate thymidylyltransferase DP2221 232 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 51244559 Common - hypothetical protein DP0707 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 51245069 Nonpathogen - hypothetical protein DP1217 1 None None None 51245042 Common - hypothetical protein DP1190 21 COG2043 COG2043, Uncharacterized protein conserved in archaea Function unknown 51246869 Common - similar to type IV prepilin leader peptidase DP3017 137 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51246853 Nonpathogen - hypothetical protein DP3001 8 COG3218 COG3218, ABC-type uncharacterized transport system, auxiliary component General function prediction only 51246013 Common - hypothetical protein DP2161 9 COG4271 COG4271, Predicted nucleotide-binding protein containing TIR -like domain Transcription 51244914 Common - similar to transposase (partial length) DP1062 6 None None None 51244502 Common - DNA gyrase, subunit A DP0650 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 51246913 Common - similar to Mn/Zn ABC transporter, ATP-binding protein DP3061 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 51244165 Nonpathogen - hypothetical protein DP0313 1 None None None 51246288 Nonpathogen - hypothetical protein DP2436 22 COG1888 COG1888, Uncharacterized protein conserved in archaea Function unknown 51244509 Common - serine dehydrogenase DP0657 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 51246574 Common - similar to two-component system sensor histidine kinase (Ntr family) DP2722 223 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 51246875 Common - hypothetical protein DP3023 40 COG1944 COG1944, Uncharacterized conserved protein Function unknown 51246158 Common - hypothetical protein DP2306 16 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 51243867 Common - hypothetical protein DP0015 3 None None None 51246805 Common - protease DP2953 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 51245305 Nonpathogen - hypothetical protein DP1453 1 None None None 51245868 Nonpathogen - hypothetical protein DP2016 1 COG1624 COG1624, Uncharacterized conserved protein Function unknown 51245286 Common - amino acid ABC transporter, periplasmic substrate-binding protein DP1434 111 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51244489 Nonpathogen - hypothetical protein DP0637 1 None None None 51244141 Common - hypothetical protein DP0289 7 None None None 51244437 Common - similar to TPR-repeat-containing proteins (partial length) DP0585 7 None None None 51245296 Common - hypothetical protein DP1444 112 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 51245762 Common - heat shock protein ClpB DP1910 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 51244698 Common - lysyl-tRNA synthetase DP0846 218 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 51244226 Nonpathogen - hypothetical protein DP0374 1 None None None 51245223 Common - hypothetical protein DP1371 98 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 51246890 Common - ethanolamine utilization protein (EutJ) DP3038 22 COG4820 EutJ, Ethanolamine utilization protein, possible chaperonin Amino acid transport and metabolism 51244840 Common - hypothetical protein DP0988 11 COG0316 IscA, Uncharacterized conserved protein Function unknown 51245258 Common - hypothetical protein DP1406 91 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51245891 Common - hypothetical protein DP2039 181 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51246139 Common - similar to ABC transporter, ATP-binding protein DP2287 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 51246340 Common - high-affinity branched-chain amino acid ABC transporter, permease protein DP2488 129 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51244412 Common - similar to 33 kDa chaperonin (Hsp33) DP0560 139 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 51246538 Common - hypothetical protein DP2686 8 None None None 51246679 Common - ribonucleoside-diphosphate reductase DP2827 224 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 51244057 Common - hydrolase, similar to penicillin acylase DP0205 51 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 51245320 Common - similar to fimbrial biogenesis protein FimU DP1468 6 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 51244802 Common - alcohol dehydrogenase DP0950 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51246306 Common - hypothetical protein DP2454 33 COG2152 COG2152, Predicted glycosylase Carbohydrate transport and metabolism 51246970 Common - hypothetical protein DP3118 112 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 51244186 Nonpathogen - hypothetical protein DP0334 1 None None None 51245265 Common - similar to ATP-dependent RNA helicase DP1413 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 51245736 Common - similar to phosphate transport system regulatory protein PhoU DP1884 197 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 51246794 Common - hypothetical protein DP2942 45 COG3494 COG3494, Uncharacterized protein conserved in bacteria Function unknown 51246761 Common - similar to ribosomal RNA methyltransferase (FtsJ) DP2909 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 51245453 Nonpathogen - hypothetical protein DP1601 1 None None None 51246884 Common - similar to propanediol utilization protein (PduT) DP3032 16 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51245507 Common - hypothetical protein DP1655 55 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 51244004 Common - acyl CoA thioester hydrolase DP0152 130 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 51244657 Common - similar to beta-phosphoglucomutase DP0805 101 COG0546 Gph, Predicted phosphatases General function prediction only 51246682 Common - similar to acetoin utilization protein (AcuB) DP2830 151 COG0517 COG0517, FOG: CBS domain General function prediction only 51245570 Common - hypothetical protein DP1718 10 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 51245333 Common - DNA-directed RNA polymerase, omega chain DP1481 53 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 51245782 Common - tRNA delta-2-isopentenylpyrophosphate transferase (TrpX) DP1930 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 51246958 Nonpathogen - hypothetical protein DP3106 1 None None None 51246068 Common - hypothetical protein DP2216 161 COG1576 COG1576, Uncharacterized conserved protein Function unknown 51244923 Common - hypothetical protein DP1071 4 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 51246346 Common - hypothetical protein DP2494 13 COG5616 COG5616, Predicted integral membrane protein Function unknown 51245940 Nonpathogen - hypothetical protein DP2088 1 None None None 51245986 Common - similar to phosphoglycolate phosphatase DP2134 167 COG0546 Gph, Predicted phosphatases General function prediction only 51244480 Common - hypothetical protein DP0628 121 COG1782 COG1782, Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain General function prediction only 51246329 Common - similar to molybdopterin converting factor, subunit 1 DP2477 9 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 51245215 Common - ABC transporter, ATP-binding protein DP1363 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51244445 Common - polysaccharide biosynthesis protein vipA/tviB DP0593 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 51244219 Nonpathogen - hypothetical protein DP0367 1 COG4907 COG4907, Predicted membrane protein Function unknown 51245026 Common - hypothetical protein DP1174 108 COG3177 COG3177, Uncharacterized conserved protein Function unknown 51244792 Common - alcohol dehydrogenase DP0940 92 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51243941 Common - similar to substrate-binding periplasmic protein (FliY) DP0089 171 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51246208 Common - similar to tRNA pseudouridine synthase A DP2356 230 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 51244296 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP0444 91 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51246665 Common - hypothetical protein DP2813 69 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51246498 Common - hypothetical protein DP2646 46 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 51246814 Common - hypothetical protein DP2962 189 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51245947 Common phdB pyruvate dehydrogenase E1 component, beta subunit DP2095 205 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 51246294 Common - hypothetical protein DP2442 16 COG4249 COG4249, Uncharacterized protein containing caspase domain General function prediction only 51244577 Common - DNA-binding transcriptional regulator IlvY DP0725 181 COG0583 LysR, Transcriptional regulator Transcription 51245357 Common - D-cysteine desulfhydrase DP1505 66 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 51245809 Common - 3-isopropylmalate dehydratase, large subunit DP1957 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 51246034 Common - hypothetical protein DP2182 19 None None None 51245731 Common - similar to arsenate reductase DP1879 134 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 51245933 Common - similar to adenosine deaminase DP2081 45 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 51244650 Common - dissimilatory sulfite reductase, beta subunit (DsrB) DP0798 35 COG2221 DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits Energy production and conversion 51245668 Common - similar to magnesium-protoporphyrin IX monomethyl ester oxidative cyclase DP1816 91 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51245567 Nonpathogen - hypothetical protein DP1715 2 None None None 51244380 Common - MTA/SAH nucleosidase DP0528 112 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 51244627 Common - ferredoxin DP0775 89 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 51245257 Common - hypothetical protein DP1405 163 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 51244727 Common - hypothetical protein DP0875 16 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 51246000 Common - hypothetical protein DP2148 68 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 51246469 Common - DNA topoisomerase III DP2617 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 51246503 Common - similar to two-component system response regulator (Che family) DP2651 214 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 51245954 Common oforB 2-oxoacid ferredoxin oxidoreductase, beta subunit DP2102 112 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 51245776 Common - similar to two-component system sensory/regulatory protein (Ntr family), probably cold-shock inducible DP1924 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51244148 Common - lipoyl synthase DP0296 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 51245663 Common - hypothetical protein DP1811 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 51246091 Nonpathogen - hypothetical protein DP2239 25 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 51244661 Common - similar to thioredoxin reductase DP0809 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51246923 Common - molybdopterin oxidoreductase DP3071 162 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51244157 Nonpathogen - hypothetical protein DP0305 1 None None None 51244277 Common - prophage integrase DP0425 107 COG0582 XerC, Integrase DNA replication, recombination, and repair 51246445 Nonpathogen - hypothetical protein DP2593 3 None None None 51246717 Nonpathogen - hypothetical protein DP2865 3 None None None 51244128 Common - heat shock protein 90 DP0276 149 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 51244043 Common - chaperonin GroES DP0191 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 51245741 Common - hypothetical protein DP1889 104 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 161485627 Common rplD 50S ribosomal protein L4 DP1125 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 51245340 Common - similar to two-component system response regulator (Ntr family) DP1488 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51246857 Common - hypothetical protein DP3005 164 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51245748 Common - similar to methyl-accepting chemotaxis protein (TlpB) DP1896 163 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246018 Common - LytB protein DP2166 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 51245559 Nonpathogen - hypothetical protein DP1707 14 None None None 51244023 Nonpathogen - hypothetical protein DP0171 1 None None None 51243987 Common - hypothetical protein DP0135 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51244138 Common - succinyl-CoA synthetase, alpha chain DP0286 206 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 51245511 Common - similar to flagellar hook-associated protein 2 DP1659 93 COG1345 FliD, Flagellar capping protein Cell motility and secretion 51245906 Nonpathogen - hypothetical protein DP2054 1 None None None 51245231 Common - similar to butanol dehydrogenase DP1379 167 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 51244209 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP0357 44 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51245396 Common - ABC transporter, ATP-binding protein DP1544 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51246483 Common - peptide synthase DP2631 204 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51245620 Common - formate dehydrogenase, beta subunit (iron-sulfur subunit) DP1768 168 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51245658 Common - Na(+)-translocating NADH-quinone reductase subunit E DP1806 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 51245893 Common - similar to fimbrial protein [Precursor] DP2041 2 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 51244397 Common - aminotransferase DP0545 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 51245646 Nonpathogen - hypothetical protein DP1794 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 51244202 Common - hypothetical protein DP0350 97 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 51244719 Nonpathogen - hypothetical protein DP0867 1 None None None 51244212 Common - hypothetical protein DP0360 24 COG3177 COG3177, Uncharacterized conserved protein Function unknown 51246238 Common - hypothetical protein DP2386 115 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 51245608 Nonpathogen - hypothetical protein DP1756 3 None None None 51246935 Common - similar to cytochrome c biogenesis protein (TlpA) DP3083 130 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 51244519 Common - septum site-determining protein (MinD) DP0667 147 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 51245117 Common - indolepyruvate oxidoreductase subunit B DP1265 74 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 51246687 Common - similar to outer membrane protein (OprM) DP2835 117 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51243958 Common - aspartate carbamoyltransferase DP0106 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 51244159 Common - cation-transporting ATPase DP0307 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 51246009 Common - NADPH-dependent butanol dehydrogenase DP2157 175 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51244632 Common - hypothetical protein DP0780 17 COG3830 COG3830, ACT domain-containing protein Signal transduction mechanisms 51244392 Common - alanine dehydrogenase DP0540 163 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 51245124 Common - coenzyme F390 synthetase DP1272 121 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 51244280 Common - putative translaldolase DP0428 170 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 51245079 Common - bifunctional methionine sulfoxide reductase A/B protein DP1227 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 51246516 Common - similar to flagellar hook protein (FlgE) DP2664 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 51246948 Common - carbamoyl-phosphate synthase, large subunit DP3096 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 51245410 Common - hypothetical protein DP1558 11 COG5418 COG5418, Predicted secreted protein Function unknown 51244236 Nonpathogen - hypothetical protein DP0384 1 None None None 51244106 Common - similar to isochorismate synthase (MenF) DP0254 199 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246110 Common - similar to methyl-accepting chemotaxis protein DP2258 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246402 Common - similar to malonyl CoA-acyl carrier protein transacylase DP2550 208 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 51245003 Common rpsD 30S ribosomal protein S4 DP1151 235 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 51246044 Common - RNA polymerase sigma-B factor DP2192 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 51246554 Common - outer membrane protease DP2702 11 COG4571 OmpT, Outer membrane protease Cell envelope biogenesis, outer membrane 51245008 Common - uridylate kinase DP1156 238 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 51244223 Common - cation efflux system protein (CzcA) DP0371 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 51246381 Common - hypothetical protein DP2529 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 51245438 Nonpathogen - hypothetical protein DP1586 1 None None None 51245925 Common - hypothetical protein DP2073 3 None None None 51246164 Nonpathogen - hypothetical protein DP2312 1 None None None 51244748 Common - twitching mobility protein DP0896 202 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 51244734 Common - similar to ATP-dependent DNA helicase II (Rep) DP0882 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51245417 Common - hypothetical protein DP1565 5 None None None 51245175 Common - similar to transcriptional regulator DP1323 193 COG0583 LysR, Transcriptional regulator Transcription 51245808 Common - hypothetical protein DP1956 209 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 51246086 Common - hypothetical protein DP2234 240 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 51246478 Nonpathogen - hypothetical protein DP2626 2 None None None 51246748 Common - UDP-N-acetylenolpyruvoylglucosamine reductase (MurB) DP2896 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 51246335 Nonpathogen - hypothetical protein DP2483 1 None None None 51244702 Common - carbonic anhydrase DP0850 137 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 51244641 Common - hypothetical protein DP0789 65 COG1872 COG1872, Uncharacterized conserved protein Function unknown 51244637 Common - hypothetical protein DP0785 58 COG1774 COG1774, Uncharacterized homolog of PSP1 Function unknown 51246098 Common - similar to opine/octopine dehydrogenase, subunit A DP2246 101 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 51244739 Common - hypothetical protein DP0887 119 COG2127 COG2127, Uncharacterized conserved protein Function unknown 51246183 Nonpathogen - hypothetical protein DP2331 1 None None None 51243951 Nonpathogen - similar to secretion protein SecG DP0099 4 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 51246435 Common - hypothetical protein DP2583 122 COG0795 COG0795, Predicted permeases General function prediction only 51245729 Common - hypothetical protein DP1877 58 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 51246063 Common - hydrogenase, small chain DP2211 50 COG1941 FrhG, Coenzyme F420-reducing hydrogenase, gamma subunit Energy production and conversion 51246471 Common - threonine synthase DP2619 132 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 51244297 Common - DctQ (C4-dicarboxylate permease, small subunit) DP0445 16 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51244467 Common - hypothetical protein DP0615 14 None None None 51244517 Common - hypothetical protein DP0665 6 None None None 51245153 Common - hypothetical protein DP1301 8 COG1633 COG1633, Uncharacterized conserved protein Function unknown 51244247 Nonpathogen - hypothetical protein DP0395 1 None None None 51246692 Common - glutamate dehydrogenase DP2840 165 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 51245103 Common - similar to chromosome partitioning protein Soj DP1251 222 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51245279 Common - translation initiation factor IF-3 DP1427 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 51246364 Common - hypothetical protein DP2512 34 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51246279 Nonpathogen - hypothetical protein DP2427 1 None None None 51246866 Nonpathogen - hypothetical protein DP3014 1 COG3339 COG3339, Uncharacterized conserved protein Function unknown 51246911 Common - similar to chloride channel protein DP3059 188 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 51243934 Common - similar to NADH dehydrogenase/NAD(P)H nitroreductase DP0082 76 COG0778 NfnB, Nitroreductase Energy production and conversion 51245589 Common - similar to UDP-N-acetylglucosamine pyrophosphorylase DP1737 234 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 51245858 Common - similar to terminase, large subunit DP2006 19 None None None 51245083 Common - similar to phosphate ABC-transporter, permease protein DP1231 222 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51245821 Common - tRNA (uracil-5-)-methyltransferase Gid DP1969 192 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 51244568 Common - similar to oxygen-independent coproporphyrinogen III oxidase DP0716 207 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 51245689 Common - ABC transporter, ATP-binding protein DP1837 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 51245126 Common - sodium/alanine symporter DP1274 115 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 51244344 Common - similar to opine oxidase, subunit B DP0492 128 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 51244504 Nonpathogen - hypothetical protein DP0652 1 None None None 51244976 Common - 50S ribosomal protein L3 DP1124 217 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 51244668 Common - ATP synthase, C chain (sodium ion specific) DP0816 31 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 51245387 Common - hypothetical protein DP1535 135 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 51244912 Common - glucokinase DP1060 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 51245965 Common - hypothetical protein DP2113 123 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51246955 Common - hypothetical protein DP3103 151 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 51246289 Nonpathogen - hypothetical protein DP2437 1 None None None 51246267 Common - similar to cobalt-dependent proline dipeptidase DP2415 92 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 51245182 Common - hypothetical protein DP1330 166 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 51246511 Common - flagellum-specific ATP synthase (FliI) DP2659 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 51244934 Nonpathogen - hypothetical protein DP1082 1 None None None 51246337 Common - hypothetical protein DP2485 42 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 51246834 Common - similar to ferredoxin DP2982 23 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 51245142 Common - hypothetical protein DP1290 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 51245927 Common ldh D-lactate dehydrogenase DP2075 197 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 51244234 Common - hypothetical protein DP0382 88 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 51245425 Nonpathogen - hypothetical protein DP1573 1 None None None 51244648 Common pgi glucose-6-phosphate isomerase DP0796 202 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 51244313 Nonpathogen - hypothetical protein DP0461 2 None None None 51244585 Nonpathogen - hypothetical protein DP0733 1 None None None 51244305 Common - hypothetical protein DP0453 63 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 51243984 Common - hypothetical protein DP0132 7 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 51244765 Common - formamidopyrimidine-DNA glycosylase DP0913 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 51245753 Common - methylenetetrahydrofolate dehydrogenase DP1901 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 51244611 Nonpathogen - hypothetical protein DP0759 6 None None None 51245970 Nonpathogen - hypothetical protein DP2118 1 None None None 51244210 Common - hypothetical protein DP0358 77 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 51245134 Common - histidinol dehydrogenase DP1282 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 51246253 Nonpathogen - hypothetical protein DP2401 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51244587 Common - hypothetical protein DP0735 2 None None None 51245244 Common - glycine-betaine transporter (BetL) DP1392 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 51245317 Nonpathogen - hypothetical protein DP1465 1 None None None 51245682 Nonpathogen - hypothetical protein DP1830 1 None None None 51245917 Common - hypothetical protein DP2065 91 COG2860 COG2860, Predicted membrane protein Function unknown 51246476 Common - similar to glutamate synthase, beta subunit DP2624 214 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 51246322 Common - hypothetical protein DP2470 3 None None None 51246309 Common - aldolase DP2457 84 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 51244835 Nonpathogen - hypothetical protein DP0983 1 None None None 51245391 Nonpathogen - similar to pilus assembly protein pilin subunit DP1539 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 51243873 Common - hypothetical protein DP0021 6 None None None 51245165 Common - putative monovalent cation/H+ antiporter subunit D DP1313 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 51244036 Nonpathogen - hypothetical protein DP0184 1 None None None 51244268 Nonpathogen - hypothetical protein DP0416 1 None None None 51246808 Common - hypothetical protein DP2956 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 51244307 Common - molybdenum ABC-transporter, ATP-binding protein (ModC) DP0455 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 51246462 Common - tRNA pseudouridine synthase B DP2610 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 51244491 Common - hypothetical protein DP0639 79 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 51244860 Common - similar to coenzyme F420 hydrogenase, delta subunit DP1008 50 COG0680 HyaD, Ni,Fe-hydrogenase maturation factor Energy production and conversion 51244548 Common - hypothetical protein DP0696 197 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 51243999 Common - similar to dipeptide ABC transporter, periplasmic binding protein (DppA) DP0147 207 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51245270 Nonpathogen - hypothetical protein DP1418 1 None None None 51244523 Common - hypothetical protein DP0671 99 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 51245487 Common - hypothetical protein DP1635 70 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 51246426 Common - similar to serine/threonine protein phosphatase DP2574 126 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 51245633 Common - hypothetical protein DP1781 38 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 51245977 Common - similar to DNA repair photolyase DP2125 21 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 51245997 Nonpathogen - hypothetical protein DP2145 1 None None None 51246544 Common - flagellar assembly protein FliW DP2692 38 COG1699 COG1699, Uncharacterized protein conserved in bacteria Function unknown 51243876 Common - hypothetical protein DP0024 18 None None None 51245057 Common - similar to peptide ABC-transporter, periplasmic substrate binding protein DP1205 179 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 51245052 Common - similar to pyruvate synthase, subunit PorA DP1200 114 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51244899 Common hycC hydrogenase, component B-formate hydrogenlyase subunit 3 DP1047 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 51245674 Common - similar to acetaldehyde dehydrogenase DP1822 74 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51244510 Common - acetyl-CoA synthetase DP0658 211 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 51246918 Common - similar to 4-Hydroxybenzoyl-CoA reductase (HcrA) DP3066 120 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 51243917 Common pflA similar to pyruvate formate-lyase activating enzyme DP0065 115 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 51246074 Common - dTDP-4-rhamnose reductase DP2222 170 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 51246192 Common - hypothetical protein DP2340 15 None None None 51245613 Nonpathogen - hypothetical protein DP1761 1 None None None 51245447 Nonpathogen - hypothetical protein DP1595 1 None None None 51245527 Common - similar to penicillin-binding protein 1A DP1675 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 51246282 Common - hypothetical protein DP2430 19 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 51244194 Common - hypothetical protein DP0342 27 COG1433 COG1433, Uncharacterized conserved protein Function unknown 51244406 Nonpathogen - hypothetical protein DP0554 1 None None None 51244831 Common - similar to methyl-accepting chemotaxis protein DP0979 163 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246699 Common rpsA 30S ribosomal protein S1 DP2847 218 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 51245498 Common - similar to flavoprotein DP1646 79 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 51246587 Common - similar to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase DP2735 187 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 51245722 Common - hypothetical protein DP1870 4 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51243898 Common - lipopolysaccharide biosynthetic protein (WbpP) DP0046 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51245520 Common - desulfoferrodoxin DP1668 29 COG2033 COG2033, Desulfoferrodoxin Energy production and conversion 51245281 Common - hypothetical protein DP1429 188 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 51244049 Common - hypothetical protein DP0197 48 COG0731 COG0731, Fe-S oxidoreductases Energy production and conversion 51246724 Nonpathogen - hypothetical protein DP2872 1 None None None 51246484 Common - similar to haloalkane dehalogenase DP2632 157 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 51246753 Common - putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase DP2901 213 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 51244906 Common - similar to fosmidomycin resistance protein DP1054 98 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51246124 Common - similar to temperature sensitive supressor DP2272 62 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 51246391 Common - similar to trigger factor DP2539 216 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 51245636 Common - lipoprotein releasing system, ATP-binding protein (LolD) DP1784 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 51244367 Common - similar to two-component system response regulator DP0515 156 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51246356 Nonpathogen - hypothetical protein DP2504 3 None None None 51245310 Nonpathogen - hypothetical protein DP1458 1 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 51245771 Common - hypothetical protein DP1919 89 COG0433 COG0433, Predicted ATPase General function prediction only 51245573 Common - molybdopterin biosynthesis protein DP1721 89 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51244980 Common - 30S ribosomal protein S19 DP1128 244 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 51246702 Nonpathogen - hypothetical protein DP2850 1 None None None 51246002 Common - cyclopropane-fatty-acyl-phospholipid synthase DP2150 127 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 51245463 Common - hypothetical protein DP1611 75 COG1469 COG1469, Uncharacterized conserved protein Function unknown 51244409 Nonpathogen - hypothetical protein DP0557 6 COG1906 COG1906, Uncharacterized conserved protein Function unknown 51246500 Common - similar to two-component system response regulator (Ntr family) DP2648 171 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51244926 Common - hypothetical protein DP1074 9 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 51245111 Common - similar to iron-sulfur flavoprotein DP1259 79 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 51245851 Nonpathogen - hypothetical protein DP1999 1 None None None 51245518 Common - similar to fructose-1,6-bisphosphatase DP1666 18 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 51245408 Nonpathogen - hypothetical protein DP1556 1 None None None 51244784 Nonpathogen - hypothetical protein DP0932 5 COG5389 COG5389, Uncharacterized protein conserved in bacteria Function unknown 51244812 Common - cold-shock protein DP0960 182 COG1278 CspC, Cold shock proteins Transcription 51245204 Common - similar to ABC transporter, ATP-binding protein DP1352 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51246785 Common - selenocysteine-specific elongation factor (SelB) DP2933 249 COG3276 SelB, Selenocysteine-specific translation elongation factor Translation, ribosomal structure and biogenesis 51245326 Common - 3-dehydroquinate synthase DP1474 203 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 51244300 Nonpathogen - hypothetical protein DP0448 2 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 51245190 Common - hypothetical protein DP1338 164 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 51245199 Common - similar to integral membrane protein (RarD) DP1347 97 COG2962 RarD, Predicted permeases General function prediction only 51244941 Common - thiamine phosphate pyrophosphorylase (ThiE) DP1089 190 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 51244800 Common - thioredoxin DP0948 202 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 51246156 Common - hypothetical protein DP2304 5 None None None 51246617 Common - excinuclease ABC subunit B DP2765 233 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 51245038 Common - hypothetical protein DP1186 113 COG3177 COG3177, Uncharacterized conserved protein Function unknown 51244541 Common - paraquat-inducible protein A DP0689 54 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 51244167 Common - similar to peptide methionine sulfoxide reductase DP0315 203 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 51246108 Nonpathogen - hypothetical protein DP2256 1 COG5181 HSH155, U2 snRNP spliceosome subunit RNA processing and modification 51244851 Common - hypothetical protein DP0999 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51246228 Common - biotin synthase DP2376 48 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 51246421 Nonpathogen - hypothetical protein DP2569 1 None None None 51246146 Common - hypothetical protein DP2294 120 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 51246563 Common - similar to transcriptional regulator DP2711 81 COG1309 AcrR, Transcriptional regulator Transcription 51244993 Common - 50S ribosomal protein L18 DP1141 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 51246215 Nonpathogen - hypothetical protein DP2363 4 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 51245544 Common - hypothetical protein DP1692 25 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 51244613 Common - similar to xylene monooxygenase electron transfer component DP0761 165 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 51244061 Common - similar to transcriptional regulator (MarR family) DP0209 55 COG1846 MarR, Transcriptional regulators Transcription 51244175 Common - hypothetical protein DP0323 33 COG4134 COG4134, ABC-type uncharacterized transport system, periplasmic component General function prediction only 51246372 Common - sensory transduction system, regulatory protein DP2520 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51245912 Nonpathogen - hypothetical protein DP2060 1 None None None 51244881 Common - amino acid ABC transporter, ATP-binding protein DP1029 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51245888 Common - death ON curing protein DP2036 10 COG3654 Doc, Prophage maintenance system killer protein General function prediction only 51244470 Nonpathogen - hypothetical protein DP0618 1 None None None 51245595 Common - similar to octaprenyl-diphosphate synthase DP1743 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 51246165 Common - similar to hydrogenase-4 transcriptional activator DP2313 171 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 51245702 Common - similar to acyl-carrier protein DP1850 47 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246210 Nonpathogen - hypothetical protein DP2358 1 None None None 51243972 Common - D-tyrosyl-tRNA deacylase DP0120 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 51244424 Common - hypothetical protein DP0572 141 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 51246676 Common - delta-aminolevulinic acid dehydratase DP2824 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 51246222 Common - similar to amino acid permease DP2370 122 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 51246906 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP3054 102 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51244086 Common - similar to phosphatidylserine decarboxylase, proenzyme DP0234 67 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 51245846 Nonpathogen - hypothetical protein DP1994 1 None None None 51244756 Common - hypothetical protein DP0904 38 COG1432 COG1432, Uncharacterized conserved protein Function unknown 51243963 Nonpathogen - hypothetical protein DP0111 3 None None None 51244893 Common - similar to two-component system sensor histidine kinase (Ntr family) DP1041 211 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51244684 Common - F0F1 ATP synthase subunit alpha DP0832 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 51245814 Nonpathogen - hypothetical protein DP1962 2 None None None 51244670 Common - DNA-binding protein HU-beta DP0818 167 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 51246733 Common - similar to glycosyl hydrolase DP2881 179 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 51246231 Common - similar to hydrogenase DP2379 57 COG4624 COG4624, Iron only hydrogenase large subunit, C-terminal domain General function prediction only 51244981 Common - 50S ribosomal protein L22 DP1129 226 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 51245795 Common - pantoate-beta-alanine ligase DP1943 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 51246597 Common - hypothetical protein DP2745 109 COG2860 COG2860, Predicted membrane protein Function unknown 51246622 Common - acetolactate synthase, small subunit DP2770 193 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 51245553 Common - hypothetical protein DP1701 32 COG0730 COG0730, Predicted permeases General function prediction only 51244208 Common - hypothetical protein DP0356 74 COG0701 COG0701, Predicted permeases General function prediction only 51244360 Common - glutamate synthase, large subunit DP0508 204 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 51244685 Common - ATP synthase, gamma chain (AtpG) DP0833 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 51246870 Common - hypothetical protein DP3018 119 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 51246610 Common - hypothetical protein DP2758 41 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 51246102 Common - hypothetical protein DP2250 123 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 51246459 Common - deoxyuridine 5'-triphosphate nucleotidohydrolase DP2607 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 51244772 Common - methylated-DNA-protein-cysteine methyltransferase DP0920 216 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 51246629 Nonpathogen - similar to gliding motility regulatory protein (MglB) DP2777 10 None None None 51244929 Nonpathogen - hypothetical protein DP1077 1 None None None 51246672 Common - hypothetical protein DP2820 41 COG1342 COG1342, Predicted DNA-binding proteins General function prediction only 51245192 Common - hypothetical protein DP1340 39 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 51245060 Common - similar to ABC transporter, ATP-binding protein DP1208 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 51245819 Common - similar to DNA mismatch repair protein MutL DP1967 161 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 51245848 Common - hypothetical protein DP1996 2 None None None 51246453 Nonpathogen - hypothetical protein DP2601 4 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 51245431 Nonpathogen - hypothetical protein DP1579 1 None None None 51245746 Nonpathogen - hypothetical protein DP1894 1 None None None 51243965 Common - similar to type II protein secretion protein DP0113 142 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 51246844 Common - similar to transposase DP2992 9 None None None 51244410 Common - phosphate acetyltransferase DP0558 180 COG0280 Pta, Phosphotransacetylase Energy production and conversion 51244000 Common - similar to dipeptide ABC transporter, permease protein (DppB) DP0148 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51246464 Common - similar to ribosome-binding factor A DP2612 150 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 51245928 Nonpathogen - hypothetical protein DP2076 1 None None None 51244359 Nonpathogen - hypothetical protein DP0507 1 None None None 51246781 Nonpathogen - hypothetical protein DP2929 1 None None None 51246694 Nonpathogen - hypothetical protein DP2842 8 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 51244987 Common - 50S ribosomal protein L24 DP1135 212 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 51245322 Common - similar to mercuric ion-binding protein DP1470 36 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 51246578 Common - peptide chain release factor 1 (RF-1) DP2726 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 51244274 Nonpathogen - hypothetical protein DP0422 1 None None None 51244469 Common - aromatic amino acid aminotransferase DP0617 72 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 51244998 Common - methionine aminopeptidase DP1146 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 51246722 Common - hypothetical protein DP2870 78 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 51246370 Common - similar to methyl-accepting chemotaxis protein A DP2518 93 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 51245535 Common - 50S ribosomal protein L28 DP1683 157 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 51245978 Common - hypothetical protein DP2126 182 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51245630 Common - hypothetical protein DP1778 130 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 51246738 Common pfor pyruvate-flavodoxin oxidoreductase DP2886 111 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51245164 Common - putative monovalent cation/H+ antiporter subunit D DP1312 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 51246169 Common - hypothetical protein DP2317 88 COG1309 AcrR, Transcriptional regulator Transcription 51246027 Common - similar to dimethyladenosine transferase DP2175 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 51246817 Common - hypothetical protein DP2965 32 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 51244352 Common - ABC transporter, ATP-binding protein DP0500 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 51245794 Common - aspartate alpha-decarboxylase DP1942 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 51246731 Common - ATP-dependent DNA helicase, UvrD/REP family DP2879 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 51246956 Nonpathogen - hypothetical protein DP3104 1 None None None 51246677 Common - hypothetical protein DP2825 12 COG5652 COG5652, Predicted integral membrane protein Function unknown 51244090 Nonpathogen - hypothetical protein DP0238 1 None None None 51244679 Common - sodium-dependent transporter DP0827 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 51246886 Common - ethanolamine utilization protein (EutM) DP3034 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51245209 Common - DctM (C4-dicarboxylate permease, large subunit) DP1357 121 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51246101 Common - hypothetical protein DP2249 35 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 51246613 Nonpathogen - hypothetical protein DP2761 1 None None None 51244691 Nonpathogen - hypothetical protein DP0839 1 None None None 51246225 Nonpathogen - hypothetical protein DP2373 9 None None None 51245027 Common - hypothetical protein DP1175 17 COG2043 COG2043, Uncharacterized protein conserved in archaea Function unknown 51246895 Common - similar to propanediol utilization protein (PduT) DP3043 16 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51245822 Nonpathogen - hypothetical protein DP1970 1 None None None 51244852 Common - similar to ABC transporter, ATP-binding protein DP1000 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51246258 Common - similar to phytoene dehydrogenase DP2406 55 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 51246835 Nonpathogen - similar to ferredoxin DP2983 1 None None None 51245202 Common - similar to molybdenum ABC-transporter, periplasmic substrate-binding protein DP1350 66 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 51245579 Common - hypothetical protein DP1727 130 COG2962 RarD, Predicted permeases General function prediction only 51244047 Common - similar to transcriptional regulator of multidrug-efflux transporter genes DP0195 79 COG0789 SoxR, Predicted transcriptional regulators Transcription 51245040 Common - DctQ (C4-dicarboxylate permease, small subunit) DP1188 77 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51243989 Common - hypothetical protein DP0137 223 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 51245116 Common - indolepyruvate ferredoxin oxidoreductase, alpha subunit DP1264 112 COG4231 COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Energy production and conversion 51246427 Nonpathogen - hypothetical protein DP2575 1 None None None 51244011 Common - similar to cytochrome-c3 hydrogenase (NiFeSe), large subunit DP0159 102 COG0374 HyaB, Ni,Fe-hydrogenase I large subunit Energy production and conversion 51245829 Common - similar to DNA gyrase inhibitory protein DP1977 30 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 51244382 Nonpathogen - hypothetical protein DP0530 2 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 51244518 Common - septum site-determining protein (MinC) DP0666 82 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 51245716 Common - hypothetical protein DP1864 14 COG1633 COG1633, Uncharacterized conserved protein Function unknown 51245752 Nonpathogen - hypothetical protein DP1900 1 COG4192 COG4192, Signal transduction histidine kinase regulating phosphoglycerate transport system Signal transduction mechanisms 51245649 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein DP1797 160 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 51243881 Common - pilin glycosylation protein DP0029 91 COG1043 LpxA, Acyl- acyl carrier protein 51246162 Nonpathogen - hypothetical protein DP2310 1 None None None 51244419 Nonpathogen - hypothetical protein DP0567 1 None None None 51244432 Common hypE hydrogenase accessory protein HypE DP0580 148 COG0309 HypE, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 51244557 Common - similar to dihydrofolate reductase DP0705 63 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 51245045 Common - hypothetical protein DP1193 2 None None None 51244885 Common - recombination factor protein RarA DP1033 244 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 51244652 Common - similar to BirA bifunctional protein DP0800 227 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 51245558 Common - hypothetical protein DP1706 54 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 51245144 Nonpathogen - hypothetical protein DP1292 2 None None None 51246704 Common - hypothetical protein DP2852 43 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 51244332 Common - similar to iron-sulfur center hydrogenase DP0480 157 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 51245401 Common - similar to transcription regulator (TetR-family) DP1549 133 COG1309 AcrR, Transcriptional regulator Transcription 51246151 Nonpathogen - hypothetical protein DP2299 2 None None None 51245667 Common - similar to transglycosylase DP1815 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 51244368 Common - hypothetical protein DP0516 121 None None None 51244021 Common - similar to dissimilatory siroheme-sulfite reductase, gamma subunit DP0169 15 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 51244435 Common hypB hydrogenase accessory protein HypB DP0583 150 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 51246093 Common - similar to transcription activator Stc DP2241 176 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51246368 Common - hypothetical protein DP2516 9 None None None 51244945 Common - phosphoenolpyruvate carboxykinase DP1093 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 51246361 Common - hypothetical protein DP2509 5 None None None 51245313 Nonpathogen - hypothetical protein DP1461 2 None None None 51245342 Common - similar to transmembrane transport proteins DP1490 141 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 51244564 Common - hypothetical protein DP0712 9 None None None 51246220 Common - similar to transposase DP2368 9 None None None 51245908 Common - hypothetical protein DP2056 39 COG3636 COG3636, Predicted transcriptional regulator Transcription 51246605 Common - similar to alanine racemase DP2753 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 51243871 Common - similar to maltose acetyltransferase DP0019 58 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 51246873 Common - hypothetical protein DP3021 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 51246915 Nonpathogen - hypothetical protein DP3063 1 None None None 51244507 Common - hypothetical protein DP0655 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 51245284 Common - similar to cold-adapted alanine dehydrogenase DP1432 163 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 51245656 Common - Na(+)-translocating NADH-quinone reductase subunit C DP1804 47 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 51245759 Nonpathogen - hypothetical protein DP1907 1 None None None 51244195 Common - small subunit of cytochrome c nitrite reductase DP0343 42 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 51244339 Common - DctM (C4-dicarboxylate permease, large subunit) DP0487 130 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51244896 Common - hydrogenase, component F-formate hydrogenlyase subunit 3 DP1044 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 51244032 Nonpathogen - hypothetical protein DP0180 1 None None None 51244832 Nonpathogen - hypothetical protein DP0980 1 None None None 51246930 Nonpathogen - hypothetical protein DP3078 1 None None None 51244192 Common - similar to iron-sulfur cluster binding protein DP0340 40 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 51244420 Common - hypothetical protein DP0568 33 COG3673 COG3673, Uncharacterized conserved protein Function unknown 51245181 Common - hypothetical protein DP1329 5 None None None 51244407 Common - acyl-CoA synthetase DP0555 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246447 Common - similar to 30S ribosomal protein S6 DP2595 25 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 51246951 Common - hypothetical protein DP3099 60 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 51244457 Common - hypothetical protein DP0605 92 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51245680 Common - similar to propanediol utilization protein (PduV) DP1828 17 COG4917 EutP, Ethanolamine utilization protein Amino acid transport and metabolism 51246545 Common - flagellin (FliC) DP2693 128 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 51245276 Common - phenylalanyl-tRNA synthetase, alpha chain DP1424 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 51245764 Common - NAD(P)H oxidoreductase DP1912 65 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 51246796 Common - (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase DP2944 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 51245440 Nonpathogen - hypothetical protein DP1588 1 None None None 51245100 Common - hypothetical protein DP1248 5 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 51245614 Common - hypothetical protein DP1762 67 COG1683 COG1683, Uncharacterized conserved protein Function unknown 51244675 Common - phosphoenolpyruvate synthase/pyruvate phosphate dikinase DP0823 122 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 51246904 Common - similar to iron-sulfur binding reductase DP3052 129 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51246005 Nonpathogen - hypothetical protein DP2153 1 None None None 51245349 Common - similar to transcriptional regulators DP1497 61 COG1846 MarR, Transcriptional regulators Transcription 51245724 Common - cold-shock protein (CspB) DP1872 180 COG1278 CspC, Cold shock proteins Transcription 51246194 Nonpathogen - hypothetical protein DP2342 1 None None None 51244269 Nonpathogen - hypothetical protein DP0417 1 None None None 51245784 Common - rRNA methylase homolog (CspR) DP1932 158 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 51244492 Common - hypothetical protein DP0640 14 None None None 51244239 Common - hypothetical protein DP0387 3 None None None 51246680 Common - hypothetical protein DP2828 36 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 51244549 Common - tRNA 2-selenouridine synthase DP0697 65 COG2603 COG2603, Predicted ATPase General function prediction only 51244659 Common - hypothetical protein DP0807 64 COG1691 COG1691, NCAIR mutase (PurE)-related proteins General function prediction only 51245056 Nonpathogen - hypothetical protein DP1204 1 None None None 51244227 Common - similar to two-component system sensor histidine kinase (Ntr family) DP0375 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51245217 Common - hypothetical protein DP1365 32 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 51246357 Common - hypothetical protein DP2505 21 None None None 51245791 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase DP1939 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 51244849 Common - dissimilatory sulfite reductase, gamma subunit (DsrC) DP0997 58 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 51245379 Common - hypothetical protein DP1527 27 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 51244538 Common - pyruvate carboxylase, beta chain DP0686 184 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 51245596 Common - similar to ATP-dependent helicase DP1744 147 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 51245464 Common - similar to 5,10-methylenetetrahydrofolate reductase DP1612 162 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 51246652 Common - 30S ribosomal protein S16 DP2800 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 51246120 Common - competence protein ComM DP2268 212 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 51245691 Common - hypothetical protein DP1839 6 None None None 51244220 Common - hypothetical protein DP0368 58 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 51244965 Common - 50S ribosomal protein L11 DP1113 247 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 51244173 Common - hypothetical protein DP0321 2 None None None 51246481 Common - hypothetical protein DP2629 124 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51244471 Common - hypothetical protein DP0619 17 COG4671 COG4671, Predicted glycosyl transferase General function prediction only 51245911 Nonpathogen - hypothetical protein DP2059 1 None None None 51245820 Common - hypothetical protein DP1968 20 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 51246508 Common - similar to flagellar M-ring protein (FliF) DP2656 125 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 51244443 Common - hypothetical protein DP0591 34 COG3681 COG3681, Uncharacterized conserved protein Function unknown 51244299 Common - hypothetical protein DP0447 41 COG4125 COG4125, Predicted membrane protein Function unknown 51246663 Nonpathogen - hypothetical protein DP2811 1 None None None 51246659 Common - hypothetical protein DP2807 166 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 51244117 Common - hypothetical protein DP0265 154 COG1964 COG1964, Predicted Fe-S oxidoreductases General function prediction only 51244683 Common - ATP synthase, delta subunit (AtpD) DP0831 195 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 51245956 Common - hypothetical protein DP2104 73 None None None 51245372 Common - hypothetical protein DP1520 142 None None None 51244635 Common - hypothetical protein DP0783 48 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 51244581 Nonpathogen - hypothetical protein DP0729 1 None None None 51245089 Nonpathogen - hypothetical protein DP1237 4 None None None 51244839 Common - similar to methyl-accepting chemotaxis protein DP0987 167 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245093 Common - similar to serine acetyltransferase DP1241 177 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 51245583 Common - cofactor-independent phosphoglycerate mutase DP1731 58 COG3635 COG3635, Predicted phosphoglycerate mutase, AP superfamily Carbohydrate transport and metabolism 51246416 Common - hypothetical protein DP2564 2 None None None 51245423 Common - hypothetical protein DP1571 40 COG3378 COG3378, Predicted ATPase General function prediction only 51244836 Nonpathogen - hypothetical protein DP0984 1 None None None 51244842 Common - similar to glutamine ABC transporter, permease protein DP0990 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51244770 Common - adenine phosphoribosyltransferase DP0918 10 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 51243853 Common - similar to methyltransferase DP0001 20 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 51244087 Common - hypothetical protein DP0235 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 51245673 Common - similar to carbon dioxide concentrating mechanism protein (PduA related) DP1821 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51244342 Common - similar to opine oxidase, subunit A DP0490 51 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 51244708 Common - hypothetical protein DP0856 64 COG1847 Jag, Predicted RNA-binding protein General function prediction only 51245635 Common - similar to lipoprotein releasing system transmembrane protein DP1783 17 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51246624 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase DP2772 148 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 51244909 Common - hypothetical protein DP1057 7 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 51246657 Common rplS 50S ribosomal protein L19 DP2805 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 51244916 Common - hypothetical protein DP1064 47 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51246630 Nonpathogen - hypothetical protein DP2778 1 None None None 51245128 Common - similar to methyl-accepting chemotaxis protein DP1276 157 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51244069 Common - Fe(III) ABC transporter, periplasmic substrate-binding protein DP0217 62 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 51244262 Nonpathogen - hypothetical protein DP0410 3 None None None 51245022 Common - hypothetical protein DP1170 37 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 51246392 Common - similar to magnesium (Mg2+) transporter DP2540 172 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 51244246 Common - citrate synthase DP0394 193 COG0372 GltA, Citrate synthase Energy production and conversion 51244082 Common - hypothetical protein DP0230 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51246176 Common - similar to predicted transcription regulator (GntR-family) DP2324 129 COG2186 FadR, Transcriptional regulators Transcription 51246129 Common - hypothetical protein DP2277 82 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 51244764 Nonpathogen - hypothetical protein DP0912 5 None None None 51244616 Common - hypothetical protein DP0764 102 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 51243943 Common - hypothetical protein DP0091 28 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51246501 Nonpathogen - similar to two-component system response regulator DP2649 3 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 51245687 Nonpathogen - hypothetical protein DP1835 1 None None None 51246116 Nonpathogen - hypothetical protein DP2264 1 None None None 51244500 Common - DNA polymerase III, beta chain DP0648 210 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 51245151 Common - hypothetical protein DP1299 3 None None None 51246286 Common - similar to transposase DP2434 56 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 51246788 Common - cell division protein FtsY DP2936 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 51245877 Common - hypothetical protein DP2025 5 None None None 51246488 Common - hypothetical protein DP2636 4 None None None 51243956 Common - sugar fermentation stimulation protein A DP0104 108 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 51244797 Common - hypothetical protein DP0945 80 COG0701 COG0701, Predicted permeases General function prediction only 51244290 Common - acetylornithine aminotransferase DP0438 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 51246565 Nonpathogen - hypothetical protein DP2713 7 None None None 51244394 Common - similar to 1,3-propanediol dehydrogenase DP0542 177 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51246244 Common - ribosomal protein S6 modification protein (RimK) DP2392 118 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 51244163 Common - dihydrofolate reductase, type VII DP0311 144 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 51245985 Common - hypothetical protein DP2133 21 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 51244762 Common - ribonuclease H DP0910 175 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 51244742 Common - hypothetical protein DP0890 67 COG1971 COG1971, Predicted membrane protein Function unknown 51244488 Common - hypothetical protein DP0636 114 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 51245704 Common - similar to dolichyl-phosphate mannose synthase DP1852 157 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51244733 Common - similar to NADPH-oxidoreductase DP0881 65 COG0778 NfnB, Nitroreductase Energy production and conversion 51244271 Nonpathogen - hypothetical protein DP0419 1 None None None 51246518 Common - similar to flagellar motor protein (MotB) DP2666 144 COG1360 MotB, Flagellar motor protein Cell motility and secretion 51245007 Common tsf elongation factor Ts DP1155 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 51245936 Nonpathogen - hypothetical protein DP2084 1 None None None 51245394 Common - hypothetical protein DP1542 190 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 51246491 Common - phosphoribosyl-AMP cyclohydrolase DP2639 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 51244862 Common - similar to heterodisulfide reductase, subunit A DP1010 42 COG1148 HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins Energy production and conversion 51246533 Common - flagellar hook basal body protein (FlgG) DP2681 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 51244818 Common - hypothetical protein DP0966 124 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 51246069 Common - hypothetical protein DP2217 20 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 51244085 Common - calcium/proton antiporter DP0233 54 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 51245232 Common - similar to NADH oxidase DP1380 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 51245653 Common - two-component system response regulator (Pho family) DP1801 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51244384 Common - glutathione peroxidase DP0532 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 51246552 Common - 1-deoxy-D-xylulose-5-phosphate synthase DP2700 231 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 51246856 Nonpathogen - hypothetical protein DP3004 1 None None None 51245744 Common - hypothetical protein DP1892 29 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 51244132 Common - similar to competence protein F DP0280 125 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 51245339 Nonpathogen - similar to two-component system sensor histidine kinase (Ntr family) DP1487 4 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51245867 Nonpathogen - hypothetical protein DP2015 1 None None None 51246114 Common - hypothetical protein DP2262 15 None None None 51245081 Common - phosphate ABC-transporter, ATP binding protein DP1229 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 51246669 Common - similar to 3-deoxy-D-manno-octulosonic-acid transferase DP2817 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 51246015 Nonpathogen - hypothetical protein DP2163 1 None None None 51243919 Common - similar to long-chain-fatty-acid--CoA ligase DP0067 215 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 51245892 Common - similar to integrase DP2040 114 COG0582 XerC, Integrase DNA replication, recombination, and repair 51243896 Common - glucose-1-phosphate thymidylyltransferase DP0044 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 51244399 Common - similar to amino acid transporter DP0547 169 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 51246551 Common - geranylgeranyl pyrophosphate synthase DP2699 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 51245786 Common - hypothetical protein DP1934 38 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51245012 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase DP1160 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 51244264 Common - DNA-invertase DP0412 130 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 51245662 Common lnt apolipoprotein N-acyltransferase DP1810 163 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 51246632 Common - hypothetical protein DP2780 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 51244633 Nonpathogen - hypothetical protein DP0781 2 None None None 51244758 Common - hypothetical protein DP0906 19 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 51244620 Common - similar to Na/dicarboxylate cotransporter DP0768 69 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 51244666 Nonpathogen - hypothetical protein DP0814 1 None None None 51246566 Common - hypothetical protein DP2714 8 None None None 51245946 Common phdC branched-chain alpha-keto acid dehydrogenase subunit E2 DP2094 196 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 51245913 Nonpathogen - hypothetical protein DP2061 1 None None None 51246436 Common - hypothetical protein DP2584 222 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 51245017 Common - GTP pyrophosphokinase DP1165 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 51246513 Nonpathogen - hypothetical protein DP2661 2 COG3334 COG3334, Uncharacterized conserved protein Function unknown 51244156 Nonpathogen - hypothetical protein DP0304 1 None None None 51245256 Common - hypothetical protein DP1404 22 COG4446 COG4446, Uncharacterized protein conserved in bacteria Function unknown 51244722 Nonpathogen - hypothetical protein DP0870 1 None None None 51243946 Common - similar to periplasmic protein (AsmA) DP0094 67 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 51246206 Common - cytosine deaminase DP2354 202 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 51246449 Common - hypothetical protein DP2597 7 COG4241 COG4241, Predicted membrane protein Function unknown 51246909 Common - hypothetical protein DP3057 31 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 51244714 Common - similar to molybdopterin biosynthesis protein moeA DP0862 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51244622 Common - electron transport complex protein DP0770 132 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 51245381 Common - similar to TadB DP1529 84 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 51244522 Common - hypothetical protein DP0670 7 None None None 51244811 Nonpathogen - similar to ferrous ion transport protein A DP0959 2 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 51245442 Nonpathogen - hypothetical protein DP1590 1 None None None 51244323 Nonpathogen - hypothetical protein DP0471 1 None None None 51244978 Common - 50S ribosomal protein L23 DP1126 211 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 51246499 Common - similar to nuclease DP2647 60 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 51246944 Nonpathogen - hypothetical protein DP3092 3 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51245801 Common - similar to cobalamin biosynthesis protein (CobD) DP1949 150 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 51246204 Common - urocanate hydratase DP2352 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 51246440 Common - gamma-glutamyl phosphate reductase DP2588 188 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 51246598 Common - anaerobic C4-dicarboxylate transporter DP2746 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 51246937 Common - hypothetical protein DP3085 42 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 51244782 Common - glutamine synthetase DP0930 233 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 51246060 Common - bidirectional hydrogenase complex protein HoxE DP2208 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 51246953 Common - hypothetical protein DP3101 74 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 51244578 Common - ketol-acid reductoisomerase DP0726 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 51244646 Common - SMF protein (DNA processing chain A) DP0794 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 51246431 Common - single-strand binding protein (Ssb) DP2579 215 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 51246638 Common - hypothetical protein DP2786 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 51244142 Common - hypothetical protein DP0290 182 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 51244171 Common - similar to guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase DP0319 35 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 51245074 Nonpathogen - hypothetical protein DP1222 1 None None None 51245994 Common - similar to transposase, fragment DP2142 74 None None None 51246711 Common - similar to tRNA/rRNA methyltransferase DP2859 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 51245869 Nonpathogen - hypothetical protein DP2017 2 None None None 51244311 Common - similar to pseudouridine synthase DP0459 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 51244438 Common - hypothetical protein DP0586 22 COG3014 COG3014, Uncharacterized protein conserved in bacteria Function unknown 51244225 Common - similar to outer membrane protein TolC [Precursor] DP0373 74 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51246296 Nonpathogen - hypothetical protein DP2444 1 None None None 51246619 Common - aspartate-semialdehyde dehydrogenase DP2767 192 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 51244109 Common - similar to IspD/IspF bifunctional enzyme (Rhodobacter capsulatus) DP0257 197 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 51245123 Common - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein DP1271 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 51246662 Common - hypothetical protein DP2810 123 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 51244107 Common - hypothetical protein DP0255 82 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 51246020 Common - COB(I)alamin adenosyltransferase (CobO) DP2168 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 51244115 Common - hypothetical protein DP0263 120 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 51244122 Common - aldehyde oxidoreductase DP0270 121 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 51244809 Common - similar to nitrogen fixation protein (NifU) DP0957 73 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 51246888 Common - similar to ethanolamine utilization protein (EutQ) DP3036 14 COG4766 EutQ, Ethanolamine utilization protein Amino acid transport and metabolism 51244693 Common - hypothetical protein DP0841 87 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 51245449 Nonpathogen - hypothetical protein DP1597 1 None None None 51244825 Common - similar to V-type sodium ATP synthase, subunit J DP0973 133 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51245088 Common - glutamine ABC transporter, periplasmic substrate binding protein DP1236 178 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51246425 Common - similar to serine/threonine protein kinase DP2573 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 51246641 Common - acyl carrier protein DP2789 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244076 Common - precorrin-3B C17-methyltransferase (CobJ) DP0224 128 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 51244255 Nonpathogen - hypothetical protein DP0403 2 COG4127 COG4127, Uncharacterized conserved protein Function unknown 51244318 Common - molybdenum ABC-transporter, ATP-binding protein DP0466 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 51245414 Nonpathogen - hypothetical protein DP1562 1 None None None 51245781 Common - similar to single-strand DNA-specific exonuclease DP1929 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 51246762 Common - similar to poly(A) polymerase DP2910 189 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 51244779 Nonpathogen - hypothetical protein DP0927 1 None None None 161485623 Common - chorismate synthase DP3058 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 51245849 Nonpathogen - hypothetical protein DP1997 1 None None None 51245099 Common - similar to ABC transporter, ATP-binding protein DP1247 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51245647 Common - nicotinate-nucleotide pyrophosphorylase DP1795 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 51246528 Common - similar to flagellar biosynthesis protein (FlhF) DP2676 174 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 51245515 Common - similar to DNA polymerase III, alpha subunit DP1663 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 51246142 Nonpathogen - hypothetical protein DP2290 1 None None None 51245306 Nonpathogen - hypothetical protein DP1454 1 None None None 51246132 Common - DNA topoisomerase IV subunit B DP2280 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 51245894 Nonpathogen - hypothetical protein DP2042 1 None None None 51243910 Common - D-alanyl-D-alanine ligase DP0058 220 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 51245551 Common - similar to transcription regulator DP1699 99 COG1309 AcrR, Transcriptional regulator Transcription 51246052 Common - cold-shock protein DP2200 179 COG1278 CspC, Cold shock proteins Transcription 51245470 Common - 30S ribosomal protein S20 DP1618 199 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 51244554 Common - hypothetical protein DP0702 132 COG1739 COG1739, Uncharacterized conserved protein Function unknown 51244184 Common - similar to molybdenum cofactor biosynthesis DP0332 70 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 51245739 Common - hypothetical protein DP1887 98 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 51244211 Common - two-component system sensory/regulatory protein (hybrid family) DP0359 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51245291 Common - hypothetical protein DP1439 220 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 51244095 Common - hypothetical protein DP0243 90 COG3153 COG3153, Predicted acetyltransferase General function prediction only 51244035 Nonpathogen - hypothetical protein DP0183 1 None None None 51244529 Common - hypothetical protein DP0677 101 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 51246612 Nonpathogen - hypothetical protein DP2760 9 None None None 51245177 Common argC N-acetyl-gamma-glutamyl-phosphate reductase DP1325 218 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 51245837 Common - similar to deca-heme c-type cytochrome DP1985 15 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 51244373 Nonpathogen - hypothetical protein DP0521 1 None None None 51245796 Nonpathogen - hypothetical protein DP1944 1 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 51245836 Common - glutamine ABC-transporter, ATP-binding protein (GlnQ) DP1984 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51245259 Common - similar to ICFG protein DP1407 140 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 51246543 Common - carbon storage regulator (CsrA) DP2691 84 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 51244371 Common - hypothetical protein DP0519 4 None None None 51245058 Common - similar to peptide ABC transporter, permease protein DP1206 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51246770 Common - similar to GTP-binding protein HflX DP2918 211 COG2262 HflX, GTPases General function prediction only 51246791 Common - GTP-binding protein (EngA) DP2939 231 COG1160 COG1160, Predicted GTPases General function prediction only 51244571 Common - DNA repair protein RadA DP0719 222 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 51245619 Common - formate dehydrogenase, gamma subunit (cytochrome B subunit) DP1767 53 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 51244347 Common - similar to methyl-accepting chemotaxis protein DP0495 168 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245020 Common - hypothetical protein DP1168 14 COG0795 COG0795, Predicted permeases General function prediction only 51246271 Common - similar to serine/threonine protein kinase DP2419 145 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 51246377 Common - ABC transporter, ATP-binding protein DP2525 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 51244066 Nonpathogen - hypothetical protein DP0214 12 COG3366 COG3366, Uncharacterized protein conserved in archaea Function unknown 51243901 Common - hypothetical protein DP0049 18 None None None 51245101 Common - hypothetical protein DP1249 24 None None None 51244592 Common - similar to two-component system sensory/regulatory protein (hybrid family) DP0740 195 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 51243923 Common - similar to 2-dehydropantoate 2-reductase DP0071 114 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 51246122 Common - similar to thiamine-monophosphate kinase (ThiL) DP2270 201 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 51246387 Nonpathogen - hypothetical protein DP2535 1 None None None 51244954 Common - transcription termination factor (NusB) DP1102 121 COG0781 NusB, Transcription termination factor Transcription 51245031 Common - oligopeptide ABC transporter, permease protein DP1179 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 51246334 Nonpathogen - hypothetical protein DP2482 1 None None None 51245071 Nonpathogen - hypothetical protein DP1219 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51246674 Common - similar to two-component system sensor histidine kinase (Ntr family) DP2822 224 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 51246300 Common - beta-glucosidase A (BglA) DP2448 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 51246747 Common - similar to cell division protein FtsQ DP2895 21 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 51244805 Common - two-component system response regulator (Ntr family) DP0953 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51244002 Common - dipeptide ABC transporter, ATP-binding protein (DppD) DP0150 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 51245901 Nonpathogen - hypothetical protein DP2049 2 None None None 51246825 Common - similar to biopolymer transport protein (ExbB) DP2973 151 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 51246084 Common - hypothetical protein DP2232 62 COG2835 COG2835, Uncharacterized conserved protein Function unknown 51246251 Common - similar to virulence factor (MviN) DP2399 204 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 51246787 Common - hypothetical protein DP2935 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51244822 Nonpathogen - hypothetical protein DP0970 2 None None None 51246815 Common - putative transporter DP2963 61 COG1133 SbmA, ABC-type long-chain fatty acid transport system, fused permease and ATPase components Lipid metabolism 51245625 Common - similar to two-component system response regulator (Nar family) DP1773 197 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 51244416 Common - hypothetical protein DP0564 16 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51245360 Common - translation initiation inhibitor DP1508 181 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51246317 Common - similar to branched-chain amino acid transport permease (AzlC) DP2465 107 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 51245824 Common - D-erythrose 4-phosphate dehydrogenase DP1972 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 51243902 Nonpathogen - hypothetical protein DP0050 1 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 51245696 Common - hypothetical protein DP1844 33 COG4258 COG4258, Predicted exporter General function prediction only 51245025 Common - hypothetical protein DP1173 4 None None None 51245456 Common - similar to integrase/recombinase DP1604 220 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51244281 Nonpathogen - hypothetical protein DP0429 3 COG3350 COG3350, Uncharacterized conserved protein Function unknown 51246076 Common - hypothetical protein DP2224 211 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51245092 Common - cysteine synthase A DP1240 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 51244008 Common - hypothetical protein DP0156 11 COG5266 CbiK, ABC-type Co2+ transport system, periplasmic component Inorganic ion transport and metabolism 51244844 Nonpathogen - hypothetical protein DP0992 1 None None None 51244936 Common - rod shape-determining protein (RodA) DP1084 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 51245319 Nonpathogen - hypothetical protein DP1467 1 None None None 51246106 Nonpathogen - hypothetical protein DP2254 1 None None None 51244854 Common - similar to serine/threonine-protein kinase DP1002 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 51246256 Common - similar to acyl carrier protein DP2404 12 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51245330 Common tatC similar to Sec-independent protein translocase protein TatC DP1478 200 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 51244330 Common - similar to Fe-S-cluster-containing oxidoreductase DP0478 143 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 51244920 Common - hypothetical protein DP1068 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 51246837 Common - hypothetical protein DP2985 2 None None None 51244681 Common - ATP synthase, subunit b' (AtpX) DP0829 30 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 51244441 Common - hypothetical protein DP0589 6 None None None 51245577 Common - oxidoreductase DP1725 109 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 51244947 Common - hypothetical protein DP1095 153 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 51246214 Common - hypothetical protein DP2362 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 51244967 Common - similar to 50S ribosomal protein L10 DP1115 209 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 51246325 Nonpathogen - hypothetical protein DP2473 4 None None None 51246608 Nonpathogen - hypothetical protein DP2756 1 None None None 51245474 Common - indole-3-glycerol phosphate synthase DP1622 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 51245714 Common - similar to transcriptional regulator DP1862 69 COG1846 MarR, Transcriptional regulators Transcription 51245403 Common - hypothetical protein DP1551 204 COG0388 COG0388, Predicted amidohydrolase General function prediction only 51245597 Nonpathogen - hypothetical protein DP1745 1 None None None 51245148 Common - sodium/alanine symporter DP1296 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 51244027 Nonpathogen - hypothetical protein DP0175 1 None None None 51245882 Common - similar to repressor protein DP2030 25 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 51245235 Nonpathogen - hypothetical protein DP1383 1 None None None 51245489 Common - N-glycosyltransferase PgaC DP1637 212 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51245200 Nonpathogen - hypothetical protein DP1348 12 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 51245693 Common - hypothetical protein DP1841 64 COG0824 FcbC, Predicted thioesterase General function prediction only 51246190 Common - hypothetical protein DP2338 8 None None None 51246706 Nonpathogen - hypothetical protein DP2854 7 None None None 51244888 Nonpathogen - hypothetical protein DP1036 1 None None None 51246823 Common - similar to TonB protein DP2971 12 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 51245637 Nonpathogen - hypothetical protein DP1785 1 None None None 51245315 Nonpathogen - hypothetical protein DP1463 1 None None None 51246818 Common - iron-dependent repressor DP2966 80 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 51245669 Common - 3-oxoacyl-(acyl carrier protein) synthase III DP1817 138 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 51244366 Common - similar to secretion protein DP0514 118 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 51245158 Nonpathogen - hypothetical protein DP1306 1 None None None 51245274 Common - similar to integration host factor, alpha subunit DP1422 206 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 51245504 Common - hypothetical protein DP1652 155 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51243883 Common - similar to glycosyl transferase (WbpU) DP0031 193 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51245105 Common - polyphosphate kinase DP1253 162 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 51246178 Nonpathogen - hypothetical protein DP2326 1 None None None 51245817 Common - similar to chaperone protein DnaJ DP1965 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 51244039 Nonpathogen - hypothetical protein DP0187 3 None None None 51244018 Common - hypothetical protein DP0166 135 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 51243899 Common - lipopolysaccharide biosynthesis protein (WbpO) DP0047 201 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 51243967 Common - preprotein translocase subunit SecB DP0115 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 51245548 Common - outer membrane efflux pump channel protein [precursor] DP1696 132 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51246455 Common - similar to acetyltransferase family DP2603 34 COG3153 COG3153, Predicted acetyltransferase General function prediction only 51243976 Common - similar to SUN protein (FMU protein) DP0124 209 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 51244405 Nonpathogen - hypothetical protein DP0553 21 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 51246487 Common - similar to two-component system sensor histidine kinase (Ntr family) DP2635 223 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 51246811 Common - leucine-responsive regulatory protein DP2959 145 COG1522 Lrp, Transcriptional regulators Transcription 51246094 Common - putative translation initiation inhibitor DP2242 117 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51244677 Common acs acetyl-coenzyme A synthetase DP0825 213 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 51244938 Common - similar to cold-shock protein DP1086 18 COG1278 CspC, Cold shock proteins Transcription 51244680 Common - alanyl-tRNA synthetase DP0828 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51244092 Common - similar to membrane proteins DP0240 4 None None None 51245066 Common - similar to RNA polymerase sigma factor for flagellar operon DP1214 56 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51245590 Common - hypothetical protein DP1738 13 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 51246592 Common - hypothetical protein DP2740 70 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 51245210 Common - DctQ (C4-dicarboxylate permease, small subunit) DP1358 16 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51246743 Common - similar to two-component system sensor histidine kinase (Ntr family) DP2891 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246022 Common - hypothetical protein DP2170 64 COG1606 COG1606, ATP-utilizing enzymes of the PP-loop superfamily General function prediction only 51246783 Nonpathogen - hypothetical protein DP2931 1 COG2198 ArcB, FOG: HPt domain Signal transduction mechanisms 51243960 Common - similar to fimbrial assembly protein PilM DP0108 83 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 51245861 Nonpathogen - hypothetical protein DP2009 2 None None None 51244476 Common - hypothetical protein DP0624 21 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 51244337 Common - DctQ (C4-dicarboxylate permease, small subunit) DP0485 18 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51246670 Common - hypothetical protein DP2818 26 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51246029 Common - hypothetical protein DP2177 33 COG2501 COG2501, Uncharacterized conserved protein Function unknown 51244460 Common - hypothetical protein DP0608 9 None None None 51244940 Common - citrate synthase DP1088 194 COG0372 GltA, Citrate synthase Energy production and conversion 51245963 Nonpathogen - hypothetical protein DP2111 1 None None None 51245166 Common - NADH dehydrogenase, subunit 4L DP1314 111 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 51244350 Common - hypothetical protein DP0498 50 COG0011 COG0011, Uncharacterized conserved protein Function unknown 51243955 Common - similar to glyceraldehyde-3-phosphate dehydrogenase DP0103 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 51245243 Common - similar to agmatinase DP1391 155 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 51246474 Nonpathogen - hypothetical protein DP2622 27 COG0067 GltB, Glutamate synthase domain 1 Amino acid transport and metabolism 51244985 Common - 30S ribosomal protein S17 DP1133 202 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 51245983 Common - hypothetical protein DP2131 26 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 51245179 Common rplM 50S ribosomal protein L13 DP1327 242 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 51246633 Nonpathogen - hypothetical protein DP2781 1 None None None 51245194 Nonpathogen - hypothetical protein DP1342 1 None None None 51246899 Nonpathogen - hypothetical protein DP3047 1 None None None 51244232 Nonpathogen - hypothetical protein DP0380 1 None None None 51245921 Nonpathogen - hypothetical protein DP2069 1 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 51245036 Nonpathogen - hypothetical protein DP1184 1 None None None 51246907 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP3055 98 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51245219 Nonpathogen - hypothetical protein DP1367 1 None None None 51244240 Common - hypothetical protein DP0388 40 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 51244429 Common hypF hydrogenase accessory protein HypF DP0577 110 COG0068 HypF, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 51246893 Common - similar to ethanolamine utilization protein (EutM) DP3041 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51244097 Nonpathogen - hypothetical protein DP0245 1 None None None 51246736 Common - hypothetical protein DP2884 8 COG2921 COG2921, Uncharacterized conserved protein Function unknown 51244357 Common - similar to glutamate synthase, large subunit DP0505 213 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 51245029 Common - oligopeptide ABC transporter, ATP-binding protein DP1177 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 51246118 Nonpathogen - similar to 6-pyruvoyltetrahydropterin synthase (partial length) DP2266 10 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 51245409 Nonpathogen - hypothetical protein DP1557 1 None None None 51245685 Nonpathogen - hypothetical protein DP1833 1 None None None 51246720 Common - hypothetical protein DP2868 20 COG1289 COG1289, Predicted membrane protein Function unknown 51246375 Common - hypothetical protein DP2523 4 COG4333 COG4333, Uncharacterized protein conserved in bacteria Function unknown 51246568 Common - nucleotide sugar epimerase DP2716 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51246850 Nonpathogen - hypothetical protein DP2998 1 None None None 51245585 Common - adenylate kinase DP1733 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 51246414 Nonpathogen - hypothetical protein DP2562 1 None None None 51246438 Common - similar to two-component system response regulator (Che family) DP2586 201 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 51244866 Common - similar to hydrogenase isoenzyme formation protein DP1014 108 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 51245671 Common - hypothetical protein DP1819 5 None None None 51245698 Common - similar to acyl carrier protein dehydratase DP1846 6 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 51245421 Common - hypothetical protein DP1569 4 COG1396 HipB, Predicted transcriptional regulators Transcription 51244028 Common - similar to integrase DP0176 80 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51246926 Common - heterodisulfide reductase DP3074 66 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51244900 Nonpathogen - hypothetical protein DP1048 1 None None None 51246305 Common - similar to glycosyltransferase DP2453 46 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51244706 Common - similar to Ribonuclease P, protein component DP0854 37 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 51244340 Common - DctQ (C4-dicarboxylate permease, small subunit) DP0488 14 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51245750 Common - similar to methyl-accepting chemotaxis protein (TlpB) DP1898 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51243890 Common - similar to glycosyl transferase DP0038 164 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51245428 Common - similar to terminase large subunit of phage lambda DP1576 30 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 51244516 Nonpathogen - hypothetical protein DP0664 1 None None None 51245024 Nonpathogen - hypothetical protein DP1172 2 None None None 51246626 Common - phosphopantetheine adenylyltransferase DP2774 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 51245491 Common - hypothetical protein DP1639 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 51243980 Common - aconitate hydratase DP0128 223 COG1048 AcnA, Aconitase A Energy production and conversion 51245803 Common - similar to cobalamin synthase (CobS) DP1951 138 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 51246861 Nonpathogen - hypothetical protein DP3009 1 None None None 51245248 Common - similar to iron(III) ABC transporter, periplasmic binding protein [Precursor] DP1396 126 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 51246130 Common - hypothetical protein DP2278 136 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 51246219 Common - similar to transcriptional regulator of extracellular enzyme genes DP2367 73 COG0819 TenA, Putative transcription activator Transcription 51245080 Common - similar to Na+/H+ antiporter DP1228 100 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 51245973 Common - similar to outer membrane lipoprotein DP2121 120 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51246277 Common - similar to cell division protein (FtsW) DP2425 206 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 51244777 Common - cytochrome d ubiquinol oxidase, subunit II DP0925 139 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 51245047 Nonpathogen - hypothetical protein DP1195 1 None None None 51245266 Common - hypothetical protein DP1414 6 None None None 51244547 Nonpathogen - hypothetical protein DP0695 3 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 51246270 Common - hypothetical protein DP2418 134 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 51246547 Common hslU ATP-dependent protease ATP-binding subunit DP2695 210 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 51244562 Nonpathogen - hypothetical protein DP0710 1 None None None 51245061 Nonpathogen - hypothetical protein DP1209 1 None None None 51244870 Common - hypothetical protein DP1018 193 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 51245261 Nonpathogen - hypothetical protein DP1409 1 None None None 51246820 Common - hypothetical protein DP2968 3 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 51246540 Nonpathogen - hypothetical protein DP2688 2 None None None 51244161 Common - similar to hexosyltransferase DP0309 22 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51243931 Common - related arylesterase [Precursor] DP0079 108 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 51245708 Common - similar to coenzyme F390 synthetase DP1856 104 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 51246603 Common - acetyltransferase DP2751 59 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 51246127 Common - similar to P-protein DP2275 159 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 51245146 Common - similar to transport protein DP1294 154 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 51244448 Common - DctQ (C4-dicarboxylate permease, small subunit) DP0596 39 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51245678 Nonpathogen - hypothetical protein DP1826 2 None None None 51246350 Common - thiamine biosynthesis protein ThiC DP2498 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 51243877 Common - GDP-mannose-4,6-dehydratase DP0025 230 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 51246871 Nonpathogen - hypothetical protein DP3019 4 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 51244190 Nonpathogen - similar to two-component system response regulator DP0338 3 COG3947 COG3947, Response regulator containing CheY-like receiver and SARP domains Signal transduction mechanisms 51246842 Common - molybdopterin biosynthesis protein (MoeA) DP2990 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51245433 Nonpathogen - hypothetical protein DP1581 4 None None None 51245186 Nonpathogen - hypothetical protein DP1334 1 None None None 51246359 Common - similar to reverse transcriptase/maturase DP2507 96 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 51245617 Common - hypothetical protein DP1765 90 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51244301 Common - hypoxanthine phosphoribosyltransferase DP0449 154 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 51245766 Common - hypothetical protein DP1914 3 None None None 51246070 Common - hypothetical protein DP2218 129 COG1678 COG1678, Putative transcriptional regulator Transcription 51246466 Common nusA transcription elongation factor NusA DP2614 222 COG0195 NusA, Transcription elongation factor Transcription 51244430 Common hypC hydrogenase accessory protein HypC DP0578 20 COG0298 HypC, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 51244030 Nonpathogen - hypothetical protein DP0178 6 None None None 51245054 Common - acyl-CoA synthetase DP1202 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244237 Common - glutamate decarboxylase DP0385 68 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 51246685 Nonpathogen - similar to sodium/calcium exchange proteins (partial length) DP2833 4 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 51244996 Common - 50S ribosomal protein L15 DP1144 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 51245484 Common - hypothetical protein DP1632 30 COG1699 COG1699, Uncharacterized protein conserved in bacteria Function unknown 51243913 Common - similar to poly(A) polymerase DP0061 223 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 51244786 Common - hypothetical protein DP0934 22 COG4895 COG4895, Uncharacterized conserved protein Function unknown 51244154 Common - similar to transcription regulator DP0302 68 COG1522 Lrp, Transcriptional regulators Transcription 51245462 Common - similar to multiple substrate aminotransferase DP1610 229 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 51245525 Common - DNA/pantothenate metabolism flavoprotein DP1673 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 51244355 Common - hypothetical protein DP0503 24 None None None 51244955 Common - similar to cell division protein (FtsK) DP1103 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 51246650 Nonpathogen - hypothetical protein DP2798 1 None None None 51243932 Common - similar to ABC transporter, multidrug resistance-like ATP-binding protein (MdlA) DP0080 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51243894 Common - hypothetical protein DP0042 36 None None None 51244007 Common - multidrug resistance protein B DP0155 211 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 51246197 Nonpathogen - hypothetical protein DP2345 1 None None None 51245207 Nonpathogen - hypothetical protein DP1355 2 COG3212 COG3212, Predicted membrane protein Function unknown 51245533 Common - cytochrome c biogenesis protein (CcsA) DP1681 146 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 51246506 Common - flagellar basal body rod protein (FlgC) DP2654 126 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 51244243 Common - hypothetical protein DP0391 29 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 51243995 Common - similar to ferrous iron transport protein B DP0143 184 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 51246754 Common - similar to sporulation specific penicillin-binding protein DP2902 130 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51244045 Common - hypothetical protein DP0193 56 COG0628 PerM, Predicted permease General function prediction only 51245345 Common - hypothetical protein DP1493 31 COG3647 COG3647, Predicted membrane protein Function unknown 51246234 Common - hypothetical protein DP2382 4 COG1700 COG1700, Uncharacterized conserved protein Function unknown 51245992 Common - integrase, fragment DP2140 25 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51246298 Nonpathogen - hypothetical protein DP2446 1 None None None 51244144 Common - chemotaxis transducer DP0292 163 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51244618 Common - CTP synthetase DP0766 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 51244183 Common - hypothetical protein DP0331 62 COG2998 TupB, ABC-type tungstate transport system, permease component Coenzyme metabolism 51243991 Common - hypothetical protein DP0139 58 COG2510 COG2510, Predicted membrane protein Function unknown 51245950 Nonpathogen - hypothetical protein DP2098 1 None None None 51243973 Common - similar to zinc metalloprotease DP0121 62 COG1026 COG1026, Predicted Zn-dependent peptidases, insulinase-like General function prediction only 51244724 Common - sulfoacetaldehyde acetyltransferase DP0872 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 51246185 Common - L-lysine aminotransferase DP2333 236 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 51244712 Common - insertion element IS1 1/5/6 protein (InsB) DP0860 20 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 51246385 Common coxM similar to aerobic-type carbon monoxide dehydrogenase, medium subunit DP2533 74 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 51244858 Common - similar to NAD-dependent DNA ligase DP1006 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 51245043 Common - hypothetical protein DP1191 86 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 51246939 Common - hypothetical protein DP3087 3 None None None 51245944 Common - lipoate-protein ligase DP2092 80 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 51244126 Common - hypothetical protein DP0274 63 COG1238 COG1238, Predicted membrane protein Function unknown 51246942 Common - hypothetical protein DP3090 49 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 161485625 Common - hydroxylamine reductase DP1226 74 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 51244520 Common - cell division topological specificity factor (MinE) DP0668 83 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 51246152 Common - similar to NonF protein DP2300 134 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 51245930 Common - similar to two-component system response regulator (Ntr family) DP2078 88 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51244788 Common - ATP-dependent RNA helicase DP0936 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 51244124 Common - hypothetical protein DP0272 84 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 51245576 Common - oxidoreductase (molybdopterin binding subunit) DP1724 89 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 51245351 Common - similar to glycerol-3-phosphate transporter DP1499 174 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 51244017 Common - similar to 6-pyruvoyl tetrahydropterin synthase DP0165 123 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 51245623 Common - hypothetical protein DP1771 5 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 51246713 Common - hypothetical protein DP2861 33 COG2052 COG2052, Uncharacterized protein conserved in bacteria Function unknown 51245121 Common - high-affinity branched-chain amino acid ABC transporter, permease protein DP1269 156 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 51243880 Common - pilin glycosylation protein DP0028 195 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 51244335 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP0483 89 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51244601 Common - similar to phosphatidylglycerophosphatase A DP0749 80 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 51244816 Common - glycine-betaine transporter (OpuD) DP0964 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 51245076 Common - hypothetical protein DP1224 72 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 51245263 Nonpathogen - hypothetical protein DP1411 1 None None None 51245354 Nonpathogen - hypothetical protein DP1502 1 None None None 51244292 Common - hypothetical protein DP0440 28 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 51246046 Common - similar to branched-chain amino acid ABC transporter, periplasmic substrate binding protein DP2194 148 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 51245010 Common - undecaprenyl pyrophosphate synthetase DP1158 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 51246041 Common - transcription elongation factor (GreA) DP2189 204 COG0782 GreA, Transcription elongation factor Transcription 51244795 Common - hypothetical protein DP0943 77 COG1733 COG1733, Predicted transcriptional regulators Transcription 51245392 Common - hypothetical protein DP1540 27 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 51246902 Common - electron transfer flavoprotein, beta subunit DP3050 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 51244396 Common - alanine dehydrogenase DP0544 163 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 51244760 Common - hypothetical protein DP0908 126 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 51245938 Common - Na+/H+ antiporter DP2086 56 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 51246168 Common - hypothetical protein DP2316 46 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 51244730 Nonpathogen - hypothetical protein DP0878 1 None None None 51244794 Nonpathogen - hypothetical protein DP0942 1 None None None 51246921 Nonpathogen - hypothetical protein DP3069 2 None None None 51244386 Common - hypothetical protein DP0534 5 None None None 51244673 Common - shikimate kinase DP0821 201 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 51246180 Common - hypothetical protein DP2328 18 None None None 51244979 Common rplB 50S ribosomal protein L2 DP1127 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 51245629 Common - similar to formate dehydrogenase accessory protein DP1777 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 51246036 Common - similar to putative soluble lytic murein transglycosylase [Precursor] DP2184 46 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51245097 Common - similar to ribonuclease III DP1245 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 51246701 Common - similar to protein-tyrosine phosphatase DP2849 45 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 51246172 Common - 2-oxoglutarate ferredoxin oxidoreductase subunit beta DP2320 113 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 51244864 Common - similar to methyl viologen-reducing hydrogenase, gamma chain DP1012 54 COG1941 FrhG, Coenzyme F420-reducing hydrogenase, gamma subunit Energy production and conversion 51244252 Nonpathogen - hypothetical protein DP0400 1 None None None 51244799 Common - hypothetical protein DP0947 19 COG4273 COG4273, Uncharacterized conserved protein Function unknown 51246928 Nonpathogen - hypothetical protein DP3076 7 None None None 161485630 Common aspA aspartate ammonia-lyase DP0352 224 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 51244100 Common - similar to sensory transduction histidine kinase (partial length) DP0248 33 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51244073 Common - precorrin-6Y C5,15-methyltransferase (CobL) DP0221 109 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 51246050 Common - DNA-damage-inducible protein P DP2198 184 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 51243969 Common - hypothetical protein DP0117 147 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 51245958 Common - hypothetical protein DP2106 43 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 51246017 Common - L,L-diaminopimelate aminotransferase DP2165 220 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 51246558 Common - similar to nitroreductase DP2706 129 COG0778 NfnB, Nitroreductase Energy production and conversion 51246067 Common - hypothetical protein DP2215 52 None None None 51246656 Common - hypothetical protein DP2804 20 COG4752 COG4752, Uncharacterized protein conserved in bacteria Function unknown 51245000 Common rpmJ 50S ribosomal protein L36 DP1148 128 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 51245467 Common - similar to phosphoribosylglycinamide formyltransferase DP1615 217 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 51246493 Common - similar to peptidyl-prolyl cis-trans isomerase (FKBP-type) DP2641 123 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 51244136 Common - succinyl-CoA synthetase, beta chain DP0284 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 51244134 Common - similar to transcription-repair coupling factor DP0282 236 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 51245772 Common - hypothetical protein DP1920 86 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 51244478 Nonpathogen - hypothetical protein DP0626 1 None None None 51244102 Common - similar to O-succinylbenzoic acid-CoA ligase (MenE) DP0250 103 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246404 Common - isoleucyl-tRNA synthetase DP2552 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245788 Common - similar to lipid-A-disaccharide synthase (LpxB) DP1936 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 51246961 Common - ribosomal large subunit pseudouridine synthase A DP3109 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 51245793 Common - similar to aminotransferase DP1941 191 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 51245706 Nonpathogen - hypothetical protein DP1854 2 None None None 51245742 Common - similar to ABC transporter, ATP-binding protein DP1890 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 51244751 Common - 30S ribosomal protein S1 DP0899 219 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 51245388 Common - hypothetical protein DP1536 52 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 51245761 Common - 6-phosphofructokinase 1 DP1909 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 51244487 Common - transcriptional regulator (MoxR) DP0635 175 COG0714 COG0714, MoxR-like ATPases General function prediction only 51243962 Common - similar to fimbrial assembly protein PilO DP0110 43 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 51246667 Common - hypothetical protein DP2815 196 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51244735 Common - similar to two-component system sensory/regulatory protein (hybrid family) DP0883 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51244744 Common - similar to 2-oxoglutarate synthase, subunit KorA DP0892 112 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 51245842 Common - hypothetical protein DP1990 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 51245660 Common - similar to glycolate oxidase, iron-sulfur subunit DP1808 181 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51244544 Common - glutamate racemase DP0692 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 51245383 Common - similar to septum site-determining protein (MinD) DP1531 103 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 51245107 Common - hypothetical protein DP1255 111 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 51245486 Common - hypothetical protein DP1634 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 51245890 Nonpathogen - hypothetical protein DP2038 1 None None None 51246745 Common - cell division protein FtsZ DP2893 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 51245605 Common - hypothetical protein DP1753 219 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51246798 Common - hypothetical protein DP2946 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 51244911 Nonpathogen - hypothetical protein DP1059 1 None None None 51244807 Common - iron-containing alcohol dehydrogenase DP0955 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51244594 Common - hydroxylamine reductase DP0742 74 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 51245854 Common - similar to arginine decarboxylase (partial length) DP2002 3 None None None 51244293 Common - ABC transporter, ATP-binding protein DP0441 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 51243925 Common - similar to ADP-ribose pyrophosphatase DP0073 48 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51244414 Common - similar to sulfate ABC transporter, permease protein DP0562 201 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 51244931 Nonpathogen - hypothetical protein DP1079 3 None None None 51246848 Common - hypothetical protein DP2996 2 COG5240 SEC21, Vesicle coat complex COPI, gamma subunit Intracellular trafficking and secretion 51244055 Common - similar to neuromedin U precursor (partial length) DP0203 18 None None None 51244064 Common - cobalt chelatase, chain A DP0212 25 COG4822 CbiK, Cobalamin biosynthesis protein CbiK, Co2+ chelatase Coenzyme metabolism 51245903 Common - hypothetical protein DP2051 28 COG3177 COG3177, Uncharacterized conserved protein Function unknown 51244664 Common - glutamate-1-semialdehyde 2,1-aminomutase DP0812 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 51244214 Common - cold-shock protein (CspB) DP0362 182 COG1278 CspC, Cold shock proteins Transcription 51244717 Common - methyl-accepting chemotaxis protein DP0865 155 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51245757 Common - GTP pyrophosphokinase DP1905 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 51244505 Common - hypothetical protein DP0653 5 None None None 51245090 Common - hypothetical protein DP1238 147 COG0679 COG0679, Predicted permeases General function prediction only 51246082 Common - nitrogen fixation protein (NifU) DP2230 144 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 51244119 Common - hypothetical protein DP0267 35 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51244495 Common - glutamyl-tRNA(Gln) amidotransferase, subunit A DP0643 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 51246765 Common - rubredoxin DP2913 108 COG1773 COG1773, Rubredoxin Energy production and conversion 51246696 Common - hypothetical protein DP2844 67 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 51246531 Nonpathogen - hypothetical protein DP2679 1 None None None 51244259 Common - hypothetical protein DP0407 136 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 51246315 Common - similar to A/G-specific adenine glycosylase DP2463 228 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 51243858 Common - hypothetical protein DP0006 7 None None None 51246302 Nonpathogen - hypothetical protein DP2450 1 None None None 51245221 Common - hypothetical protein DP1369 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 51246515 Common - similar to basal-body rod modification protein (FlgD) DP2663 115 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 51245565 Common - similar to transposase DP1713 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 51246333 Nonpathogen - hypothetical protein DP2481 1 None None None 51246838 Common - formate dehydrogenase, chain A DP2986 185 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 51244999 Common - translation initiation factor IF-1 DP1147 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 51244918 Common - hypothetical protein DP1066 146 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51245541 Common - GTP-binding protein Era homolog DP1689 246 COG1159 Era, GTPase General function prediction only 51245493 Common - phosphoglucomutase/phosphomannomutase DP1641 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 51246571 Nonpathogen - hypothetical protein DP2719 1 None None None 51245726 Common - similar to hemolysin III DP1874 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 51244276 Nonpathogen - hypothetical protein DP0424 1 None None None 51246266 Common - similar to hemolysin A DP2414 130 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 51244458 Common - membrane protein GlpM DP0606 14 COG3136 GlpM, Uncharacterized membrane protein required for alginate biosynthesis General function prediction only 51244827 Nonpathogen - hypothetical protein DP0975 1 None None None 51245298 Common - two-component system response regulator (Ntr family) DP1446 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51246831 Common - iron (III) ABC transporter, permease protein DP2979 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 51243908 Common - hypothetical protein DP0056 6 None None None 51244052 Nonpathogen - hypothetical protein DP0200 4 None None None 51245472 Common - para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II DP1620 235 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 51246526 Common flhB flagellar biosynthesis protein FlhB DP2674 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 51245876 Common - hypothetical protein DP2024 9 None None None 51245367 Nonpathogen - hypothetical protein DP1515 1 None None None 51245139 Common - similar to pirin DP1287 148 COG1741 COG1741, Pirin-related protein General function prediction only 51245268 Common - hypothetical protein DP1416 6 None None None 51245049 Nonpathogen - hypothetical protein DP1197 1 None None None 51243996 Common - hypothetical protein DP0144 204 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 51245839 Common - similar to 5' to 3' DNA helicase DP1987 120 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 51246144 Common - similar to two-component system sensory/regulatory protein (hybrid family) DP2292 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51244253 Nonpathogen - hypothetical protein DP0401 1 None None None 51246344 Common - similar to proline dehydrogenase DP2492 124 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 51245513 Common - similar to flagellin DP1661 140 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 51244536 Common - NADH dehydrogenase subunit E DP0684 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 51245237 Common - peptidase DP1385 204 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 51244402 Common - similar to NADH oxidase DP0550 212 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 51246932 Common - similar to cytochrome c biogenesis protein CcsA DP3080 121 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 51244325 Nonpathogen - hypothetical protein DP0473 1 None None None 51246769 Nonpathogen - hypothetical protein DP2917 1 None None None 51246793 Common - similar to mannose-1-phosphate guanylyltransferase DP2941 37 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 51246134 Common - hypothetical protein DP2282 17 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 51245250 Common - hypothetical protein DP1398 36 COG1342 COG1342, Predicted DNA-binding proteins General function prediction only 51245293 Common - similar to sodium-dependent transporter DP1441 148 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 51245825 Common - deoxyribose-phosphate aldolase DP1973 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 51246209 Nonpathogen - hypothetical protein DP2357 1 None None None 51246584 Common - peptidyl-tRNA hydrolase DP2732 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 51244874 Common - glycolate oxidase subunit (GlcD) DP1022 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 51245300 Nonpathogen - hypothetical protein DP1448 1 None None None 51244624 Common - similar to Na-translocating NADH-quinone reductase (RnfG/NqrC) DP0772 7 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 51244375 Common - general secretion pathway protein E DP0523 224 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 51245130 Nonpathogen - hypothetical protein DP1278 1 None None None 51244695 Common - hypothetical protein DP0843 117 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 51246801 Common - tryptophan synthase subunit beta DP2949 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 51243865 Common - similar to glycosyltransferase involved capsular polysaccharide biosynthesis DP0013 197 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51244527 Common - similar to transketolase DP0675 209 COG3958 COG3958, Transketolase, C-terminal subunit Carbohydrate transport and metabolism 51246772 Common - hypothetical protein DP2920 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 51244074 Common - precorrin-4 C11-methyltransferase (CobM) DP0222 203 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 51245282 Common - similar to DNA polymerase III, subunit gamma/tau DP1430 13 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 51245132 Common - uroporphyrinogen decarboxylase DP1280 179 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 51244552 Nonpathogen - hypothetical protein DP0700 2 None None None 51245640 Nonpathogen - hypothetical protein DP1788 1 None None None 51245161 Common - NADH dehydrogenase, subunit 2 DP1309 209 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 51246246 Nonpathogen - hypothetical protein DP2394 13 None None None 51245506 Common - hypothetical protein DP1654 17 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 51245798 Common - similar to two-component system sensor histidine kinase (Pho family) DP1946 186 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 51246485 Nonpathogen - hypothetical protein DP2633 1 None None None 51244235 Common - hypothetical protein DP0383 170 COG0730 COG0730, Predicted permeases General function prediction only 51246621 Common - acetolactate synthase isozyme III, large subunit (IlvI) DP2769 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 51246917 Common - hypothetical protein DP3065 19 None None None 51246582 Common - similar to ribosomal large subunit pseudouridine synthase D DP2730 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 51245444 Common - hypothetical protein DP1592 9 None None None 51245468 Common - pyrimidine regulatory protein PyrR DP1616 110 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 51244304 Common - hypothetical protein DP0452 67 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 51244905 Common - hypothetical protein DP1053 44 COG0730 COG0730, Predicted permeases General function prediction only 51245185 Common - similar to long-chain-fatty-acid--CoA ligase DP1333 215 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 51245141 Common - putative SAM-dependent methyltransferase DP1289 28 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 51246479 Common - hypothetical protein DP2627 37 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 51244198 Common - hypothetical protein DP0346 5 COG1359 COG1359, Uncharacterized conserved protein Function unknown 51244649 Common - dissimilatory sulfite reductase, alpha subunit (DsrA) DP0797 32 COG2221 DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits Energy production and conversion 51245524 Common - hypothetical protein DP1672 142 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 51246504 Nonpathogen - hypothetical protein DP2652 3 None None None 51244534 Common - formate dehydrogenase, alpha chain DP0682 215 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51244191 Common - hypothetical protein DP0339 35 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 51245499 Common - flavoprotein DP1647 86 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 51244265 Common - hypothetical protein DP0413 5 COG5619 COG5619, Uncharacterized conserved protein Function unknown 51244511 Common - 4-hydroxybutyrate CoA-transferase DP0659 145 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 51244671 Common - ribosomal large subunit pseudouridine synthase B DP0819 182 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 51246968 Common - pyruvate kinase DP3116 234 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 51243897 Common - dTDP-D-glucose-4,6-dehydratase DP0045 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 51244446 Common - hypothetical protein DP0594 126 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51244545 Common - similar to methyltransferase DP0693 173 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 51244642 Common - similar to triosephosphate isomerase DP0790 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 51245916 Common - hypothetical protein DP2064 50 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 51246727 Nonpathogen - similar to molybdenum cofactor biosynthesis protein DP2875 10 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 51244701 Common - high affinity sulfate transporter (SulP) DP0849 153 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 51245278 Common - 50S ribosomal protein L35 DP1426 106 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 51244743 Common - 2-oxoglutarate ferredoxin oxidoreductase subunit beta DP0891 110 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 51243950 Nonpathogen - hypothetical protein DP0098 1 None None None 51246756 Common - hypothetical protein DP2904 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 51245273 Common - hypothetical protein DP1421 26 COG1715 Mrr, Restriction endonuclease Defense mechanisms 51245013 Common - hypothetical protein DP1161 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 51245588 Common - CreA protein DP1736 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 51245316 Common - similar to prepilin peptidase dependent protein D [Precursor] DP1464 25 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 51246750 Common - similar to peptidoglycan synthesis protein (MurG) DP2898 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 51246096 Common - hypothetical protein DP2244 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 51244353 Common - ABC transporter, permease protein DP0501 184 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51245632 Nonpathogen - hypothetical protein DP1780 1 None None None 51245212 Nonpathogen - hypothetical protein DP1360 1 None None None 51245418 Common - hypothetical protein DP1566 19 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51244877 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP1025 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 51246655 Common - tRNA (guanine-N1)-methyltransferase DP2803 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 51246954 Common - ABC transporter, ATP-binding protein DP3102 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 51245086 Common - hypothetical protein DP1234 87 COG0628 PerM, Predicted permease General function prediction only 51245393 Nonpathogen - hypothetical protein DP1541 1 None None None 51243875 Common - GDP-L-fucose synthetase DP0023 223 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 51244709 Common trmE tRNA modification GTPase TrmE DP0857 234 COG0486 ThdF, Predicted GTPase General function prediction only 51246212 Common - similar to methyl-accepting chemotaxis protein DP2360 164 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246863 Common - similar to 3-phosphoshikimate 1-carboxyvinyltransferase DP3011 228 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 51244322 Common - similar to two-component system response regulator (Ntr family) DP0470 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245041 Common - DctP (periplasmic C4-dicarboxylate binding protein) DP1189 101 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 51245228 Common - hypothetical protein DP1376 29 None None None 51246647 Common - similar to fatty acid/phospholipid synthesis protein (PlsX) DP2795 16 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 51246784 Common - similar to cell cycle protein MesJ DP2932 224 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 51246330 Common - similar to excinuclease ABC, subunit C DP2478 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 51244957 Common - adenylylsulfate reductase DP1105 44 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 51244617 Common - 2-dehydro-3-deoxyphosphooctonate aldolase DP0765 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 51244178 Common - ammonium transporter DP0326 200 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 51245812 Nonpathogen - hypothetical protein DP1960 2 None None None 51246412 Common - hypothetical protein DP2560 6 None None None 51244846 Common - similar to L-asparaginase DP0994 137 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 51246410 Common - hypothetical protein DP2558 10 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 51246321 Common - hypothetical protein DP2469 3 None None None 51245426 Nonpathogen - hypothetical protein DP1574 1 None None None 51244215 Common - hypothetical protein DP0363 11 None None None 51243983 Nonpathogen - hypothetical protein DP0131 1 None None None 51246199 Common - similar to transcription regulator (GntR family) DP2347 127 COG1802 GntR, Transcriptional regulators Transcription 51246283 Nonpathogen - hypothetical protein DP2431 1 None None None 51246841 Common - similar to molybdenum transport protein (ModE) DP2989 86 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 51245247 Common - similar to iron(III) ABC transporter, permease protein (HitB) DP1395 181 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 51244610 Common - hypothetical protein DP0758 17 COG5266 CbiK, ABC-type Co2+ transport system, periplasmic component Inorganic ion transport and metabolism 51246182 Common - similar to indole-3-pyruvate decarboxylase DP2330 213 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 51245677 Common - similar to propanediol utilization protein (PduT) DP1825 16 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51246832 Common - iron (III) ABC transporter, periplasmic-binding protein DP2980 133 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 51243857 Common - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DP0005 33 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 51246698 Common - hypothetical protein DP2846 31 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 51245051 Common - pyruvate synthase, gamma subunit DP1199 61 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 51246900 Nonpathogen - hypothetical protein DP3048 1 None None None 51245371 Nonpathogen - hypothetical protein DP1519 1 None None None 51244974 Common - elongation factor Tu DP1122 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 51245856 Nonpathogen - hypothetical protein DP2004 1 None None None 51244361 Common - hypothetical protein DP0509 114 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 51245170 Common - NADH dehydrogenase, subunit 7 DP1318 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 51245991 Nonpathogen - hypothetical protein DP2139 1 None None None 51244503 Common - glycerol-3-phosphate dehydrogenase DP0651 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 51246461 Common - 30S ribosomal protein S15 DP2609 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 51244242 Common - hypothetical protein DP0390 10 COG0400 COG0400, Predicted esterase General function prediction only 51244768 Common - phosphomethylpyrimidine kinase (ThiD) DP0916 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 51244913 Common - hypothetical protein DP1061 13 COG1571 COG1571, Predicted DNA-binding protein containing a Zn-ribbon domain General function prediction only 51244567 Common - similar to DNA repair protein RadC DP0715 177 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 51246541 Common - similar to Flagellar hook-associated protein 1 (FlgK) DP2689 123 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 51245683 Nonpathogen - hypothetical protein DP1831 1 None None None 51244037 Nonpathogen - hypothetical protein DP0185 2 None None None 51244496 Common - similar to Glu-tRNA(Gln) amidotransferase, subunit C DP0644 163 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 51245873 Nonpathogen - hypothetical protein DP2021 1 None None None 51246929 Common - periplasmic tail-specific proteinase DP3077 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 51246384 Common coxS aerobic-type carbon monoxide dehydrogenase, small subunit DP2532 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 51244898 Common - similar to hydrogenase, component C-formate hydrogenlyase subunit 4 DP1046 62 COG0650 HyfC, Formate hydrogenlyase subunit 4 Energy production and conversion 51246532 Common - similar to flagellar basal-body rod protein (FlgF) DP2680 125 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 51245826 Common - similar to ribokinase DP1974 203 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 51244942 Nonpathogen - hypothetical protein DP1090 1 None None None 51246768 Common - orotate phosphoribosyltransferase DP2916 172 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 51243938 Common - hypothetical protein DP0086 123 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 51243915 Common - hypothetical protein DP0063 40 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 51245815 Nonpathogen - hypothetical protein DP1963 3 None None None 51244484 Common - putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta DP0632 210 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 51244753 Common - hypothetical protein DP0901 240 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 51245968 Common - hypothetical protein DP2116 20 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 51243953 Common - phosphoglycerate kinase DP0101 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 51244205 Common - anaerobic C4-dicarboxylate transporter DP0353 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 51246458 Common - hypothetical protein DP2606 63 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 51244994 Common - 30S ribosomal protein S5 DP1142 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 51246202 Common - formiminotransferase-cyclodeaminase DP2350 32 COG3643 COG3643, Glutamate formiminotransferase Amino acid transport and metabolism 51246628 Common - gliding motility protein (MglA) DP2776 19 COG2229 COG2229, Predicted GTPase General function prediction only 51245554 Common - hypothetical protein DP1702 78 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 51246581 Common - hypothetical protein DP2729 194 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 51245030 Common - oligopeptide ABC transporter, ATP-binding protein DP1178 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 51245505 Common - hypothetical protein DP1653 80 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 51246591 Common - hypothetical protein DP2739 26 COG4642 COG4642, Uncharacterized protein conserved in bacteria Function unknown 51244450 Nonpathogen - hypothetical protein DP0598 1 None None None 51245712 Common - hypothetical protein DP1860 90 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 51244861 Common - Fe-S oxidoreductase DP1009 74 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51245241 Common - similar to transcriptional regulator DP1389 170 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51246218 Common - hypothetical protein DP2366 55 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51244014 Nonpathogen - hypothetical protein DP0162 1 None None None 51246422 Common - hypothetical protein DP2570 71 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 51245884 Common - hypothetical protein DP2032 5 None None None 51246804 Common - fumarate hydratase class I, anaerobic DP2952 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 51245160 Common - similar to CAAX prenyl protease DP1308 72 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 51245297 Common - hypothetical protein DP1445 99 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 51243892 Common - similar to acetyltransferase DP0040 93 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 51245701 Common - similar to 3-oxoacyl-acyl carrier protein synthase DP1849 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246675 Common - similar to two-component system response regulator (Ntr family) DP2823 180 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51244071 Common - precorrin-8X methylmutase (CobH) DP0219 118 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 51246166 Nonpathogen - hypothetical protein DP2314 1 None None None 51246373 Common - similar to 7,8-dihydro-8-oxoguanine-triphosphatase DP2521 38 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 51246827 Common - hypothetical protein DP2975 17 None None None 51244230 Common - similar to sugar ABC transporter, ATP-binding protein DP0378 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 51245539 Common - hypothetical protein DP1687 80 COG1279 COG1279, Lysine efflux permease General function prediction only 51246660 Common - similar to 4-hydroxythreonine-4-phosphate dehydrogenase (PdxA) DP2808 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 51246397 Common - similar to biotin synthesis protein (BioC) DP2545 93 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 51244984 Nonpathogen - 50S ribosomal protein L29 DP1132 1 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 51244950 Common - hypothetical protein DP1098 7 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 51246602 Common secA preprotein translocase subunit SecA DP2750 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 51246635 Common - integration host factor, alpha-subunit DP2783 194 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 51246179 Common - hypothetical protein DP2327 19 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 51243948 Common - GufA protein DP0096 84 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 51244815 Common - similar to methyl-accepting chemotaxis protein DP0963 155 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245205 Nonpathogen - hypothetical protein DP1353 1 None None None 51246327 Common - similar to molybdopterin biosynthesis protein (MoeA) DP2475 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 51244868 Nonpathogen - similar to methylamine utilization protein DP1016 10 None None None 51245325 Common - 3-dehydroquinate synthase DP1473 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 51245405 Common - hypothetical protein DP1553 10 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 51246905 Common - DctMQ fusion protein (C4-dicarboxylate transporter) DP3053 127 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51246105 Nonpathogen - hypothetical protein DP2253 1 None None None 51244427 Common hynA Ni/Fe-hydrogenase, large subunit DP0575 101 COG0374 HyaB, Ni,Fe-hydrogenase I large subunit Energy production and conversion 51245459 Common - similar to 27kDa outer membrane protein DP1607 89 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 51244975 Common - 30S ribosomal protein S10 DP1123 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 51246734 Common - hypothetical protein DP2882 20 COG2314 XynA, Predicted membrane protein Function unknown 51246522 Common - similar to flagellar protein (FliO) DP2670 4 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 51245112 Common - similar to rubrerythrin DP1260 15 COG1592 COG1592, Rubrerythrin Energy production and conversion 51246451 Common - replicative DNA helicase DP2599 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 51245532 Common - similar to lipoprotein DP1680 130 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 51245196 Common - similar to exodeoxyribonuclease V, beta chain DP1344 219 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 51245355 Nonpathogen - hypothetical protein DP1503 1 None None None 51244575 Common - Trk system potassium uptake protein (TrkH) DP0723 143 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51246025 Common - probable O-sialoglycoprotein endopeptidase DP2173 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 51245262 Nonpathogen - hypothetical protein DP1410 1 None None None 51245719 Common - similar to transcription regulator (AraC-type) DP1867 146 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 51246708 Common - hypothetical protein DP2856 68 COG0456 RimI, Acetyltransferases General function prediction only 51246839 Common - formate dehydrogenase, iron-sulfur chain DP2987 179 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 51245651 Common - enolase DP1799 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 51246807 Common - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase DP2955 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 51246881 Common - similar to ethanolamine utilization protein (EutN) DP3029 22 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51245104 Common - hypothetical protein DP1252 29 COG5607 COG5607, Uncharacterized conserved protein Function unknown 51245156 Common - hypothetical protein DP1304 98 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 51244654 Common - similar to polysialic acid capsule expression protein (KpsF) DP0802 165 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 51244925 Common - hypothetical protein DP1073 6 COG4679 COG4679, Phage-related protein Function unknown 51246691 Common - arginyl-tRNA-protein transferase DP2839 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 51246442 Common obgE GTPase ObgE DP2590 249 COG0536 Obg, Predicted GTPase General function prediction only 51244949 Nonpathogen - hypothetical protein DP1097 5 None None None 51246539 Nonpathogen - similar to regulator of flagellin synthesis, FlgM (partial length) DP2687 2 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 51244343 Common - hypothetical protein DP0491 20 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51245756 Nonpathogen - hypothetical protein DP1904 1 None None None 51245039 Common - DctM (C4-dicarboxylate permease, large subunit) DP1187 129 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 51243885 Common - asparagine synthetase (WbpS) DP0033 147 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 51246561 Common - hypothetical protein DP2709 21 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51245236 Common - hypothetical protein DP1384 190 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51244982 Common - 30S ribosomal protein S3 DP1130 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 51244697 Common - elongation factor P DP0845 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 51243994 Nonpathogen - similar to ferrous ion transport protein A DP0142 5 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 51245253 Common - hypothetical protein DP1401 123 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51244841 Common - amino acid permease, ATP-binding protein DP0989 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51246343 Common - delta-1-pyrroline-5-carboxylate dehydrogenase DP2491 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51246136 Common - hypothetical protein DP2284 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 51245800 Common - nucleoside diphosphate kinase DP1948 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 51246072 Common - dTDP-glucose 4,6-dehydratase DP2220 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 51243926 Common - GTP-binding protein TypA/BipA DP0074 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 51245473 Common - similar to anthranilate phosphoribosyltransferase DP1621 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 51245732 Common - phosphate ABC transporter, ATP-binding protein (PstB) DP1880 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 51246819 Nonpathogen - hypothetical protein DP2967 1 None None None 51244995 Nonpathogen - similar to 50S ribosomal protein L30 DP1143 4 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 51244483 Common - hypothetical protein DP0631 166 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 51246644 Common - similar to electron transfer flavoprotein, beta-subunit DP2792 35 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 51246802 Common - hypothetical protein DP2950 60 COG3434 COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains Signal transduction mechanisms 51245571 Common - hypothetical protein DP1719 68 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 51244740 Common - hypothetical protein DP0888 29 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 51245162 Nonpathogen - NADH dehydrogenase, subunit 4 DP1310 3 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 51245481 Common - lysyl-tRNA synthetase DP1629 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 51245728 Common - hypothetical protein DP1876 5 COG2367 PenP, Beta-lactamase class A Defense mechanisms 51245452 Nonpathogen - hypothetical protein DP1600 1 None None None 51244110 Common - hypothetical protein DP0258 89 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 51245095 Common - homoserine O-acetyltransferase DP1243 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 51246401 Common - similar to biotin synthetase (BioB) DP2549 177 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 51245331 Nonpathogen tatB similar to Sec-independent protein translocase protein TatB DP1479 8 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 51245735 Common - similar to phosphate ABC transporter, permease protein (PstC) DP1883 227 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 51246353 Common - hypothetical protein DP2501 107 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 51246079 Common - formate-tetrahydrofolate ligase DP2227 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 51244969 Common - DNA-directed RNA polymerase, beta-subunit DP1117 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 51244377 Nonpathogen - hypothetical protein DP0525 4 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51244370 Common - hypothetical protein DP0518 32 COG3672 COG3672, Predicted periplasmic protein Function unknown 51244873 Common - similar to glycolate oxidase, iron-sulfur subunit (GlcF) DP1021 183 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 51246934 Nonpathogen - hypothetical protein DP3082 4 COG3897 COG3897, Predicted methyltransferase General function prediction only 51246963 Common - hypothetical protein DP3111 26 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 51246742 Common - similar to NADH oxidase DP2890 223 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 51245833 Common - similar to methyl-accepting chemotaxis protein DP1981 180 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51245830 Common - site-specific recombinase (XerD-like) DP1978 182 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 51246683 Common - hypothetical protein DP2831 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 51244005 Common - hypothetical protein DP0153 110 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51245603 Common - hypothetical protein DP1751 19 COG4671 COG4671, Predicted glycosyl transferase General function prediction only 51245119 Common - similar to acetolactate synthase, small subunit DP1267 38 COG4747 COG4747, ACT domain-containing protein General function prediction only 51244828 Common - hypothetical protein DP0976 57 COG2985 COG2985, Predicted permease General function prediction only 51244892 Common - two-component system response regulator (Ntr family) DP1040 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245721 Common - hypothetical protein DP1869 219 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 51245308 Nonpathogen - hypothetical protein DP1456 1 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 51245754 Nonpathogen - hypothetical protein DP1902 1 None None None 51246573 Common - similar to two-component system response regulator (Ntr family) DP2721 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51245879 Nonpathogen - hypothetical protein DP2027 1 None None None 51244551 Nonpathogen - hypothetical protein DP0699 1 None None None 51245519 Common - similar to iron-sulfur cluster-binding protein DP1667 29 COG2768 COG2768, Uncharacterized Fe-S center protein General function prediction only 51246922 Common - hypothetical protein DP3070 37 COG5557 COG5557, Polysulphide reductase Energy production and conversion 51244882 Common - amino acid ABC transporter, permease protein DP1030 177 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51245399 Common - hypothetical protein DP1547 6 None None None 51244558 Common - sodium-linked D-alanine/glycine transporter DP0706 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 51244801 Common - hypothetical protein DP0949 132 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 51246307 Common - hypothetical protein DP2455 150 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 51244775 Common - similar to enoyl-[acyl-carrier-protein] reductase [NADH] DP0923 181 COG0623 FabI, Enoyl- acyl-carrier-protein 51246868 Common - similar to dihydroorotate dehydrogenase, electron transfer subunit DP3016 122 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 51246312 Common - hypothetical protein DP2460 31 COG2152 COG2152, Predicted glycosylase Carbohydrate transport and metabolism 51244062 Common - hypothetical protein DP0210 54 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 51246812 Common - diaminopimelate decarboxylase DP2960 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 51245642 Common - similar to two-component system response regulator (hybrid family) DP1790 222 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51246530 Common - similar to RNA polymerase sigma factor (FliA) DP2678 208 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 51243970 Common glyQ glycyl-tRNA synthetase subunit alpha DP0118 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 51245023 Nonpathogen - hypothetical protein DP1171 1 None None None 51246235 Common - hypothetical protein DP2383 8 None None None 51243907 Common - hypothetical protein DP0055 15 None None None 51246057 Common - hypothetical protein DP2205 179 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51243975 Common - hypothetical protein DP0123 3 None None None 51245768 Common - similar to transcriptional regulator DP1916 98 COG2186 FadR, Transcriptional regulators Transcription 51244598 Common - peptide deformylase DP0746 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 51246263 Common - hypothetical protein DP2411 4 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 51244295 Common - hypothetical protein DP0443 8 None None None 51244715 Common - hypothetical protein DP0863 35 COG2362 DppA, D-aminopeptidase Amino acid transport and metabolism 51246716 Common - similar to peptidoglycan-associated lipoprotein [Precursor] DP2864 144 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 51245872 Common - sensory transduction system regulatory protein DP2020 121 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 51244188 Common - similar to 1-acyl-sn-glycerol-3-phosphate acyltransferase DP0336 129 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 51246524 Common - flagellar biosynthetic protein (FliQ) DP2672 127 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 51244596 Common - hypothetical protein DP0744 127 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 51245537 Common - similar to thiamin biosynthesis protein (ThiF) DP1685 218 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 51246829 Nonpathogen - hypothetical protein DP2977 2 None None None 51246059 Common - similar to ATP-dependent helicase HrpA DP2207 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 51246293 Nonpathogen - hypothetical protein DP2441 1 None None None 51244605 Nonpathogen - hypothetical protein DP0753 3 None None None 51244964 Common - transcription antitermination protein NusG DP1112 215 COG0250 NusG, Transcription antiterminator Transcription 51244821 Common - selenide,water dikinase DP0969 123 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 51244257 Nonpathogen - hypothetical protein DP0405 1 None None None 51244050 Common - hypothetical protein DP0198 139 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 51244879 Common - enoyl-[acyl-carrier-protein] reductase [NADH] DP1027 208 COG0623 FabI, Enoyl- acyl-carrier-protein 51245435 Common - similar to capsid protein GPC of phage lambda DP1583 53 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51245295 Common - similar to RNA-methyltransferase DP1443 199 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 51244413 Common - hypothetical protein DP0561 33 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 51245666 Common - hypothetical protein DP1814 81 COG2968 COG2968, Uncharacterized conserved protein Function unknown 51245384 Common - hypothetical protein DP1532 16 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 51245924 Common - hypothetical protein DP2072 18 None None None 51245356 Common - translation initiation inhibitor DP1504 180 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51244286 Common - hypothetical protein DP0434 14 None None None 51244619 Common - similar to Na/dicarboxylate cotransporter DP0767 142 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 51244222 Nonpathogen - hypothetical protein DP0370 3 None None None 51246382 Common - hypothetical protein DP2530 85 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 51245749 Common - similar to methyl-accepting chemotaxis protein (TlpB) DP1897 152 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246490 Common hisG ATP phosphoribosyltransferase DP2638 167 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 51244278 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DP0426 200 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 51246043 Common - pleiotropic regulatory protein DP2191 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 51245805 Common - similar to bifunctional cobalamin biosynthesis protein (CobP) DP1953 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 51246049 Common - transcription regulator (Fnr-like) DP2197 176 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51245508 Common - hypothetical protein DP1656 23 COG1592 COG1592, Rubrerythrin Energy production and conversion 51245365 Nonpathogen - hypothetical protein DP1513 2 None None None 51244745 Common - glutamate synthase, small chain DP0893 189 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 51246080 Common - hypothetical protein DP2228 23 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 51245512 Common - similar to flagellar protein FlaG DP1660 20 COG1334 FlaG, Uncharacterized flagellar protein FlaG Cell motility and secretion 51244738 Common - ATP-dependent Clp protease, ATP-binding subunit ClpA DP0886 224 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 51244703 Common - prolipoprotein diacylglyceryl transferase DP0851 202 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 51246555 Common - oxidoreductase DP2703 140 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 51245411 Common - amino acid ABC transporter, periplasmic substrate-binding protein DP1559 167 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51244137 Common - similar to glycerophosphoryl diester phosphodiesterase [Precursor] DP0285 35 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 51246703 Common - similar to collagenase DP2851 138 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 51246966 Common - hypothetical protein DP3114 28 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51245064 Common - similar to paracaspase DP1212 15 COG4249 COG4249, Uncharacterized protein containing caspase domain General function prediction only 51244662 Common - thioredoxin DP0810 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 51245657 Common - Na(+)-translocating NADH-quinone reductase subunit D DP1805 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 51245783 Common - similar to DNA transport competence protein (ComEA) DP1931 27 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 51244250 Common - hypothetical protein DP0398 10 None None None 51244933 Common - similar to rod shape-determining protein (MreC) DP1081 103 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 51246113 Common - transposase InsA DP2261 12 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 51244857 Nonpathogen - hypothetical protein DP1005 1 None None None 51246495 Common - similar to purine-binding chemotaxis protein CheW DP2643 135 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 51244444 Common - similar to cobalt chelatase DP0592 24 COG4822 CbiK, Cobalamin biosynthesis protein CbiK, Co2+ chelatase Coenzyme metabolism 51244638 Common - methionyl-tRNA synthetase DP0786 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245390 Nonpathogen - similar to pilus assembly protein pilin subunit DP1538 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 51245137 Common - similar to nitrogen assimilation regulatory protein DP1285 175 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51246039 Common - hypothetical protein DP2187 238 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 51244327 Common - biotin synthase DP0475 57 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 51246064 Common - hydrogenase, large chain DP2212 112 COG3259 FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit Energy production and conversion 51244398 Common - similar to 1,3-propanediol dehydrogenase DP0546 175 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51244669 Common - hypothetical protein DP0817 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 51245844 Nonpathogen - hypothetical protein DP1992 1 None None None 51244462 Nonpathogen - hypothetical protein DP0610 1 None None None 51244793 Common - butanalol dehydrogenase DP0941 170 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51246556 Nonpathogen - hypothetical protein DP2704 1 None None None 51244475 Common - proteinase (collagenase) precursor DP0623 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 51244388 Nonpathogen - hypothetical protein DP0536 1 None None None 51244626 Common - similar to Na-translocating NADH-quinone reductase, Nqr5 subunit DP0774 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 51244972 Common - 30S ribosomal protein S7 DP1120 242 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 51245961 Common - similar to secretion proteins DP2109 141 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 51246947 Common - carbamoyl phosphate synthase small subunit DP3095 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 51246595 Common - hypothetical protein DP2743 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 51246666 Common - similar to penicillin-binding protein 4 [Precursor] DP2814 94 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 51246006 Common - outer membrane lipoprotein Blc [Precursor] DP2154 67 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 51244316 Common - similar to molybdenum ABC-transporter, permease protein (ModB) DP0464 211 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 51245998 Common - hypothetical protein DP2146 30 None None None 51246432 Common - similar to glycosyl transferase DP2580 212 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 51246207 Common - acid phosphatase DP2355 35 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 51244584 Nonpathogen - hypothetical protein DP0732 1 None None None 51243863 Nonpathogen - hypothetical protein DP0011 1 None None None 161485628 Common - S-adenosylmethionine synthetase DP0801 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 51245067 Nonpathogen - hypothetical protein DP1215 1 COG1750 COG1750, Archaeal serine proteases General function prediction only 51246615 Common - cobyrinic acid A,C-diamide synthase (CobB) DP2763 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 51244543 Common - similar to osmoregulated proline transporter DP0691 114 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 51245951 Common - hypothetical protein DP2099 10 None None None 51244103 Common - similar to N-acylamino acid racemase (MenC) DP0251 91 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 51244710 Nonpathogen - hypothetical protein DP0858 1 None None None 51244145 Common - transcriptional regulator DP0293 193 COG0583 LysR, Transcriptional regulator Transcription 51246030 Nonpathogen - hypothetical protein DP2178 1 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 51244127 Common - protein-L-isoaspartate(D-aspartate) O-methyltransferase DP0275 157 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 51244629 Common - hypothetical protein DP0777 119 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 51244112 Common - similar to two-component system response regulator (Ntr family) DP0260 67 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51245775 Common - hypothetical protein DP1923 5 None None None 51244526 Common - similar to uracil permease DP0674 123 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 51243942 Common - similar to glutamine transport system permease protein (GlnP) DP0090 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51246087 Common - similar to two-component system response regulator (Ntr family) DP2235 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 51244044 Common - branched-chain amino acid aminotransferase DP0192 209 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 51244181 Common - similar to ABC transporter, ATP-binding protein DP0329 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 51245127 Common - amino acid carrier protein (AlsT) DP1275 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 51246319 Common - hypothetical protein DP2467 33 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 51245581 Nonpathogen - hypothetical protein DP1729 17 COG4802 FtrB, Ferredoxin-thioredoxin reductase, catalytic subunit Energy production and conversion 51245650 Common - thiol peroxidase DP1798 114 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51244038 Common - hypothetical protein DP0186 46 COG1203 COG1203, Predicted helicases General function prediction only 51244320 Common - similar to methyl-accepting chemotaxis protein DP0468 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245932 Nonpathogen - hypothetical protein DP2080 1 None None None 51245328 Common - similar to cytidine and deoxycytidylate deaminase family protein DP1476 204 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 51244644 Common - similar to DNA primase (DnaG) DP0792 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 51243985 Common - similar to cadmium efflux system accessory protein DP0133 161 COG0640 ArsR, Predicted transcriptional regulators Transcription 51244025 Common - hypothetical protein DP0173 40 COG1694 MazG, Predicted pyrophosphatase General function prediction only 51244603 Common - transcription regulator DP0751 42 COG1522 Lrp, Transcriptional regulators Transcription 51245289 Common - amino acid ABC transporter, ATP-binding protein DP1437 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 51244726 Common - hypothetical protein DP0874 28 COG2859 COG2859, Uncharacterized protein conserved in bacteria Function unknown 51244218 Nonpathogen - hypothetical protein DP0366 1 None None None 51245275 Common - similar to phenylalanyl-tRNA synthetase, beta chain DP1423 245 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 51246517 Common - similar to flagellar motor apparatus (MotA) DP2665 103 COG1291 MotA, Flagellar motor component Cell motility and secretion 51246154 Nonpathogen - hypothetical protein DP2302 1 None None None 51245214 Common - similar to tyrosine-specific transport protein DP1362 28 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 51246001 Common - hypothetical protein DP2149 63 COG3496 COG3496, Uncharacterized conserved protein Function unknown 51244229 Common - hypothetical protein DP0377 33 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 51246365 Nonpathogen - hypothetical protein DP2513 8 COG0730 COG0730, Predicted permeases General function prediction only 51244499 Common - hypothetical protein DP0647 79 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 51245245 Common - similar to transcription regulator (GntR-family) DP1393 119 COG1802 GntR, Transcriptional regulators Transcription 51244176 Common - hypothetical protein DP0324 82 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 51244200 Common - hypothetical protein DP0348 23 None None None 51246281 Nonpathogen - hypothetical protein DP2429 1 None None None 51246254 Common - hypothetical protein DP2402 12 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 51244197 Common - molybdenum ABC transporter, ATP-binding protein (ModF) DP0345 248 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 51244935 Common - penicillin-binding protein 2 DP1083 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 51243855 Common - hypothetical protein DP0003 50 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 51245675 Common - Pyruvate formate-lyase 2 DP1823 58 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 51244907 Nonpathogen - hypothetical protein DP1055 1 None None None 51244312 Common panF sodium/panthothenate symporter DP0460 170 COG4145 PanF, Na+/panthothenate symporter Coenzyme metabolism 51245810 Common - similar to 3-isopropylmalate dehydratase, small subunit DP1958 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 51244766 Common - hypothetical protein DP0914 20 COG2977 EntD, Phosphopantetheinyl transferase component of siderophore synthetase Secondary metabolites biosynthesis, transport, and catabolism 51246470 Common - hypothetical protein DP2618 196 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 51245495 Common - chaperone DnaK DP1643 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 51246336 Common - similar to flagellar biosynthetic protein (FlhB) DP2484 100 COG2257 COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB Function unknown 51246419 Nonpathogen - hypothetical protein DP2567 1 None None None 51246390 Common - ATP-dependent Clp protease, proteolytic subunit (ClpP) DP2538 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51244887 Common - similar to arginine kinase DP1035 23 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 51246420 Nonpathogen - hypothetical protein DP2568 1 None None None 51245374 Common - hypothetical protein DP1522 26 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 51246865 Common - similar to 3-dehydroquinate dehydratase DP3013 53 COG0710 AroD, 3-dehydroquinate dehydratase Amino acid transport and metabolism 51246809 Common - similar to competence-damage inducible protein (CinA) DP2957 213 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 51244588 Nonpathogen - hypothetical protein DP0736 1 None None None 51246268 Common - exodeoxyribonuclease (ExoA) DP2416 243 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 51246323 Common - hypothetical protein DP2471 3 None None None 51244569 Common - hypothetical protein DP0717 48 COG2954 COG2954, Uncharacterized protein conserved in bacteria Function unknown 51246725 Common - 7,8-dihydro-8-oxoguanine-triphosphatase DP2873 21 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 51243935 Nonpathogen - hypothetical protein DP0083 1 None None None 51245857 Common - putative portal protein (phage) DP2005 10 None None None 51246463 Common - hypothetical protein DP2611 77 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 51246273 Nonpathogen - hypothetical protein DP2421 1 None None None 51245850 Common - hypothetical protein DP1998 2 None None None 51244834 Common - H+-transporting ATPase, plasma membrane-type DP0982 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 51246125 Nonpathogen - hypothetical protein DP2273 1 None None None 51244614 Common - hypothetical protein DP0762 93 COG1720 COG1720, Uncharacterized conserved protein Function unknown 51246940 Nonpathogen - hypothetical protein DP3088 2 None None None 51245688 Common - similar to ABC transporter, permease protein DP1836 14 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 51246759 Common - 3-methyl-2-oxobutanoate hydroxymethyltransferase DP2907 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 51244422 Common - aspartyl-tRNA synthetase DP0570 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245084 Common - similar to phosphate ABC transporter, periplasmic substrate binding protein DP1232 112 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 51244773 Common - similar to hydantoin utilization protein A DP0921 103 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51244713 Common - insertion element iso-IS1d protein (InsA) DP0861 14 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 51244248 Common - hypothetical protein DP0396 40 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 51243870 Common - hypothetical protein DP0018 2 None None None 51246502 Common - hypothetical protein DP2650 21 COG1406 COG1406, Predicted inhibitor of MCP methylation, homolog of CheC Cell motility and secretion 51244455 Common - similar to ABC transporter, ATP-binding protein DP0603 136 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 51245828 Common - ATP-dependent RNA helicase DbpA DP1976 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 51246919 Common - 4-hydroxybenzoyl-CoA reductase (HcrC) DP3067 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 51245521 Nonpathogen - hypothetical protein DP1669 5 None None None 51244319 Nonpathogen - hypothetical protein DP0467 1 None None None 51245446 Nonpathogen - hypothetical protein DP1594 2 None None None 51245528 Common - similar to membrane-bound lytic murein transglycosylase D [Precursor] DP1676 150 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 51246846 Common - similar to lipase 1 DP2994 37 COG5571 COG5571, Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion Cell motility and secretion 51245280 Common - threonyl-tRNA synthetase DP1428 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51244647 Common - ribulose-phosphate 3-epimerase DP0795 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 51246611 Common - hypothetical protein DP2759 28 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 51245183 Common asnC asparaginyl-tRNA synthetase DP1331 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 51245188 Nonpathogen - similar to alpha-acetolactate decarboxylase DP1336 1 None None None 51245612 Common - similar to DNA polymerase, bacteriophage-type DP1760 138 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 51244894 Common - similar to hydrogenase, component I-formate hydrogenlyase subunit 7 DP1042 192 COG3260 COG3260, Ni,Fe-hydrogenase III small subunit Energy production and conversion 51245545 Common - hypothetical protein DP1693 126 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 51243936 Nonpathogen - hypothetical protein DP0084 1 None None None 51244048 Common - hypothetical protein DP0196 92 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 51245135 Common - similar to glucose inhibited division protein B DP1283 142 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 51245271 Nonpathogen - hypothetical protein DP1419 1 None None None 51246497 Common - similar to chemotaxis protein methyltransferase CheR DP2645 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 51246477 Nonpathogen - similar to serine /threonine protein phosphatase DP2625 3 None None None 51246399 Common - 8-amino-7-oxononanoate synthase (BioF) DP2547 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 51243998 Nonpathogen - hypothetical protein DP0146 1 None None None 51246752 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase DP2900 218 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 51246878 Common pflC similar to pyruvate formate-lyase activating enzyme DP3026 63 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 51245568 Nonpathogen - hypothetical protein DP1716 1 None None None 51243874 Common - UTP-glucose-1-phosphate uridylyltransferase DP0022 233 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 51244586 Common - hypothetical protein DP0734 15 COG3613 COG3613, Nucleoside 2-deoxyribosyltransferase Nucleotide transport and metabolism 51244640 Common - hypothetical protein DP0788 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 51246653 Common - hypothetical protein DP2801 67 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 51244490 Common - hypothetical protein DP0638 73 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 51245634 Common - similar to lipoprotein releasing system transmembrane protein DP1782 13 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 51244863 Nonpathogen - methyl-viologen-reducing hydrogenase, delta subunit DP1011 32 COG1908 FrhD, Coenzyme F420-reducing hydrogenase, delta subunit Energy production and conversion 51246189 Nonpathogen - hypothetical protein DP2337 1 None None None 51245488 Common - hypothetical protein DP1636 18 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 51244308 Common - molybdenum ABC transporter, permease protein (ModB) DP0456 213 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 51245143 Nonpathogen - hypothetical protein DP1291 2 None None None 51244306 Common - similar to IAA-amino acid hydrolase [Precursor] DP0454 174 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 51245976 Common - similar to transcriptional regulator DP2124 118 COG1309 AcrR, Transcriptional regulator Transcription 51245643 Common - similar to MCP-glutamate methylesterase (CheB) DP1791 151 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 51244233 Nonpathogen - hypothetical protein DP0381 2 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 51246952 Common - hypothetical protein DP3100 56 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 51244700 Common - Na+/H+ antiporter (NhaD family) DP0848 33 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 51244267 Nonpathogen - hypothetical protein DP0415 1 None None None 51244783 Common - high affinity sulfate transporter (SulP) DP0931 162 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 51244089 Common - hypothetical protein DP0237 28 COG1278 CspC, Cold shock proteins Transcription 51246537 Common - similar to flagellar muramidase protein (FlgJ) DP2685 24 COG3951 COG3951, Rod binding protein Cell envelope biogenesis, outer membrane / Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 51245327 Nonpathogen - hypothetical protein DP1475 3 None None None 51246639 Common - ribose 5-phosphate isomerase B DP2787 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 51245648 Common - valyl-tRNA synthetase DP1796 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 51245717 Common - ferredoxin DP1865 25 COG1141 Fer, Ferredoxin Energy production and conversion 51244686 Common - F0F1 ATP synthase subunit beta DP0834 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 51245497 Common - peptidyl-prolyl cis-trans isomerase DP1645 209 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 51246887 Common eutD phosphotransacetylase DP3035 163 COG0280 Pta, Phosphotransacetylase Energy production and conversion 51246786 Common - hypothetical protein DP2934 222 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 51243887 Common - similar to transposase DP0035 22 None None None 51245407 Nonpathogen - hypothetical protein DP1555 1 None None None 51244059 Common - glycine betaine/L-proline transport system permease protein (ProW) DP0207 206 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 51245530 Common - hypothetical protein DP1678 72 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 51246174 Common - similar to 2-ketoglutarate oxidoreductase, delta chain DP2322 45 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 51244880 Common - glutamine ABC transporter, permease protein DP1028 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51244408 Common - similar to DNA-binding protein H-NS DP0556 26 COG2916 Hns, DNA-binding protein H-NS General function prediction only 51245334 Common - chaperone protein DnaJ DP1482 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 51244813 Common - hypothetical protein DP0961 57 COG1237 COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II General function prediction only 51246221 Nonpathogen - hypothetical protein DP2369 1 None None None 51245198 Common - similar to integral membrane protein (RarD) DP1346 95 COG2962 RarD, Predicted permeases General function prediction only 51245697 Common - hypothetical protein DP1845 5 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 51246588 Common - hypothetical protein DP2736 13 None None None 51246103 Common - hypothetical protein DP2251 95 COG1720 COG1720, Uncharacterized conserved protein Function unknown 51246520 Common - similar to flagellar motor switch protein (FliM) DP2668 98 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 51246109 Common - hypothetical protein DP2257 117 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 51244540 Common - hypothetical protein DP0688 56 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 51244168 Common - superoxide dismutase [Fe] DP0316 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 51244830 Common - similar to methyl-accepting chemotaxis protein DP0978 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245102 Common - hypothetical protein DP1250 30 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 51245574 Common - transport protein DP1722 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 51244003 Common - dipeptide ABC transporter, ATP-binding protein (DppF) DP0151 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 51246883 Common - similar to ethanolamine utilization protein (EutM) DP3031 27 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 51244260 Nonpathogen - hypothetical protein DP0408 1 None None None 51245779 Common - hypothetical protein DP1927 234 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 51246259 Common - 3-oxoacyl-[acyl-carrier protein] reductase DP2407 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51246003 Common - hypothetical protein DP2151 21 None None None 51244927 Nonpathogen - hypothetical protein DP1075 1 None None None 51243916 Common - anaerobic ribonucleoside triphosphate reductase DP0064 106 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 51243964 Common - similar to fimbrial assembly protein PilQ [Precursor] DP0112 48 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 51245311 Nonpathogen - hypothetical protein DP1459 1 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 51245770 Common - hypothetical protein DP1918 22 None None None 51244333 Common - formate dehydrogenase, chain A DP0481 203 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 51244401 Common - similar to nitrite reductase DP0549 39 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 51246115 Nonpathogen - hypothetical protein DP2263 1 None None None 51244755 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein DP0903 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 51245813 Nonpathogen - hypothetical protein DP1961 2 None None None 51246673 Nonpathogen - hypothetical protein DP2821 4 None None None 51246232 Nonpathogen - hypothetical protein DP2380 1 None None None 51245347 Common - hypothetical protein DP1495 134 COG2252 COG2252, Permeases General function prediction only 51246429 Common - hypothetical protein DP2577 67 COG3272 COG3272, Uncharacterized conserved protein Function unknown 51244944 Common - lambda CII stability-governing protein (HflK) DP1092 210 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 51245885 Common - 5-methylcytosine-specific restriction enzyme A DP2033 20 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 51245845 Nonpathogen - hypothetical protein DP1993 1 None None None 51244464 Nonpathogen - hypothetical protein DP0612 2 None None None 51244207 Common - transcriptional regulator DP0355 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51246200 Nonpathogen - hypothetical protein DP2348 2 None None None 51246363 Nonpathogen - hypothetical protein DP2511 1 None None None 51244656 Nonpathogen - hypothetical protein DP0804 5 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 51245400 Nonpathogen - hypothetical protein DP1548 1 None None None 51245918 Common - hypothetical protein DP2066 50 COG2860 COG2860, Predicted membrane protein Function unknown 51245710 Common - similar to acyl carrier protein DP1858 143 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 51246239 Common fumC fumarate hydratase DP2387 216 COG0114 FumC, Fumarase Energy production and conversion 51245318 Nonpathogen - hypothetical protein DP1466 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 51246227 Common - hypothetical protein DP2375 52 COG1479 COG1479, Uncharacterized conserved protein Function unknown 51246618 Common - hypothetical protein DP2766 5 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51246965 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP3113 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246562 Common - hypothetical protein DP2710 15 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 51246216 Nonpathogen - hypothetical protein DP2364 1 None None None 51245703 Common - hypothetical protein DP1851 30 COG4261 COG4261, Predicted acyltransferase General function prediction only 51244452 Common - two-component system response regulator (Pho family) DP0600 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51246147 Nonpathogen - hypothetical protein DP2295 1 None None None 51245880 Nonpathogen - hypothetical protein DP2028 1 None None None 51246898 Common - similar to ethanolamine utilization protein (EutQ) DP3046 11 COG4766 EutQ, Ethanolamine utilization protein Amino acid transport and metabolism 51245466 Common - bifunctional purine biosynthesis protein (PurH) DP1614 214 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 51244850 Common - hypothetical protein DP0998 32 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 51245337 Common - hypothetical protein DP1485 35 COG1469 COG1469, Uncharacterized conserved protein Function unknown 51246527 Common flhA flagellar biosynthesis protein A DP2675 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 51244425 Common - polyA polymerase DP0573 212 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 51243971 Common - hypothetical protein DP0119 189 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 51246371 Common - hypothetical protein DP2519 53 COG1584 COG1584, Predicted membrane protein Function unknown 51244473 Common - hypothetical protein DP0621 12 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 51245966 Nonpathogen - hypothetical protein DP2114 1 None None None 51246600 Common - hypothetical protein DP2748 59 COG1237 COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II General function prediction only 51246310 Common - similar to mannose-6-phosphate isomerase DP2458 41 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 51245019 Common - outer membrane protein MIP (macrophage infectivity potentiator) DP1167 134 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 51244690 Nonpathogen - hypothetical protein DP0838 1 None None None 51243921 Common - hypothetical protein DP0069 4 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 51246111 Nonpathogen - hypothetical protein DP2259 1 None None None 51246889 Nonpathogen - hypothetical protein DP3037 1 None None None 51244501 Common - DNA gyrase, subunit B DP0649 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 51243944 Common - hypothetical protein DP0092 67 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 51244607 Common - serine protease DegQ [Precursor] DP0755 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 51244349 Common - similar to hydrogenase expression/formation protein (HypE) DP0497 115 COG0309 HypE, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 51244803 Common - alcohol dehydrogenase DP0951 172 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 51245870 Nonpathogen - hypothetical protein DP2018 1 None None None 51246596 Common - similar to Mg-protoporphyrin IX monomethyl ester oxidative cyclase DP2744 83 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51244915 Nonpathogen - hypothetical protein DP1063 1 None None None 51246854 Nonpathogen - hypothetical protein DP3002 5 None None None 51246912 Common - similar to Mn/Zn ABC transporter, periplasmic solute binding protein DP3060 167 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 51246749 Common - UDP-N-acetylmuramate-alanine ligase DP2897 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 51246175 Common - similar to transmembrane transport protein DP2323 84 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 51246718 Common - hypothetical protein DP2866 12 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 51246062 Common - bidirectional hydrogenase complex protein HoxU DP2210 179 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 51244130 Common - similar to chromosomal replication initiator protein DnaA DP0278 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 51246664 Nonpathogen - hypothetical protein DP2812 1 None None None 51244098 Common - similar to serine protease DP0246 57 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 51244283 Common - dihydrodipicolinate reductase DP0431 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 51245695 Nonpathogen - hypothetical protein DP1843 1 None None None 51244922 Common - diacylglycerol kinase DP1070 109 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 51246149 Common - hypothetical protein DP2297 123 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 51246055 Common - similar to NAD-dependent malic enzyme DP2203 118 COG0281 SfcA, Malic enzyme Energy production and conversion 51244843 Common - glutamine ABC transporter, periplasmic substrate binding protein DP0991 185 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 51246261 Common - similar to biopolymer transport protein (TolQ) DP2409 149 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 51244532 Common - xanthine-guanine phosphoribosyltransferase DP0680 77 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 51244411 Common - acetate kinase DP0559 162 COG0282 ackA, Acetate kinase Energy production and conversion 51244060 Common proX glycine betaine transporter periplasmic subunit DP0208 44 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 51243904 Nonpathogen - hypothetical protein DP0052 1 None None None 51245980 Common - hypothetical protein DP2128 22 COG1846 MarR, Transcriptional regulators Transcription 51244040 Nonpathogen - hypothetical protein DP0188 1 None None None 51246729 Common - HNH endonuclease family protein DP2877 8 COG1403 McrA, Restriction endonuclease Defense mechanisms 51246529 Common - similar to flagellar biosynthesis protein (FlhG) DP2677 228 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 51245397 Common - hypothetical protein DP1545 152 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 51246779 Common - similar to AmpG protein DP2927 110 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 51244962 Nonpathogen - hypothetical protein DP1110 1 None None None 51245501 Common - hypothetical protein DP1649 129 COG0398 COG0398, Uncharacterized conserved protein Function unknown 51244823 Common - hypothetical protein DP0971 3 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 51246138 Common - hypothetical protein DP2286 103 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 51244187 Common - glcerophosphoryl diester phosphodiesterase DP0335 169 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 51244988 Common rplE 50S ribosomal protein L5 DP1136 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 51245454 Common - hypothetical protein DP1602 30 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 51245363 Common - DctQ (C4-dicarboxylate permease, small subunit) DP1511 50 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 51244056 Common - hydrolase, similar to penicillin acylase DP0204 52 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 51245264 Common - similar to xanthine permease DP1412 135 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 51245536 Nonpathogen - hypothetical protein DP1684 1 None None None 51246242 Common - hypothetical protein DP2390 9 None None None 51245737 Common - similar to two-component system response regulator (Pho family) DP1885 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 51246341 Common - high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD) DP2489 148 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 51246355 Common - RNA polymerase sigma factor (RpoD) DP2503 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 51245172 Common - NADH dehydrogenase, subunit 10 DP1320 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 51244539 Common - oxaloacetate decarboxylase, beta chain DP0687 56 COG1883 OadB, Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Energy production and conversion 51245332 Common - adenylosuccinate synthetase DP1480 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 51245475 Common - similar to N-(5'-phosphoribosyl)anthranilate isomerase DP1623 195 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 51243992 Nonpathogen - hypothetical protein DP0140 1 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 51246347 Common - similar to 3-oxoacyl-[acyl-carrier protein] reductase DP2495 220 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 51246681 Nonpathogen - hypothetical protein DP2829 4 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 51245037 Nonpathogen - hypothetical protein DP1185 1 None None None 51245835 Common - glutamine ABC-transporter, permease protein (GlnP) DP1983 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51245416 Common - hypothetical protein DP1564 26 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 51244080 Common - outer membrane protein F DP0228 164 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 51246760 Common - hypothetical protein DP2908 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 51244078 Common - similar to TPR repeat proteins DP0226 116 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 51246646 Common - fatty acid/phospholipid synthesis protein DP2794 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 51244789 Common - carbonic anhydrase DP0937 148 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 51246348 Nonpathogen - hypothetical protein DP2496 6 None None None 51245369 Nonpathogen - hypothetical protein DP1517 2 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 51245655 Common - Na(+)-translocating NADH-quinone reductase subunit B DP1803 76 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 51244351 Common - hydroxyethylthiazole kinase DP0499 77 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 51245905 Common - hypothetical protein DP2053 25 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 51246776 Common - hypothetical protein DP2924 114 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 51246575 Nonpathogen - hypothetical protein DP2723 1 None None None 51245287 Common - amino acid ABC transporter, permease protein DP1435 168 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 51245860 Nonpathogen - hypothetical protein DP2008 1 None None None 51244379 Common - similar to ATP-dependent dsDNA exonuclease (SbcD) DP0527 99 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 51245763 Common - hypothetical protein DP1911 5 None None None 51245615 Common tatC similar to Sec-independent protein translocase protein TatC DP1763 183 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 51245900 Nonpathogen - hypothetical protein DP2048 1 None None None 51244481 Nonpathogen - hypothetical protein DP0629 35 COG2520 COG2520, Predicted methyltransferase General function prediction only 51244560 Common - hypothetical protein DP0708 67 COG1636 COG1636, Uncharacterized protein conserved in bacteria Function unknown 51245304 Common - similar to fimbrial protein [Precursor] DP1452 40 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 51245896 Nonpathogen - hypothetical protein DP2044 1 None None None 51246140 Common - similar to toluene ABC-transporter, permease protein DP2288 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 51245594 Nonpathogen - hypothetical protein DP1742 1 None None None 51246157 Nonpathogen - hypothetical protein DP2305 2 None None None 51245730 Common - hypothetical protein DP1878 194 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 51245847 Common - hypothetical protein DP1995 2 None None None 51246535 Common - similar to flagellar L-ring protein precursor (FlgH) DP2683 101 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 51244436 Common - hypothetical protein DP0584 7 None None None 51245469 Common - similar to collagenase (proteinase) DP1617 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 51245832 Common - hypothetical protein DP1980 175 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 51246795 Common - UDP-N-acetylglucosamine acyltransferase DP2943 145 COG1043 LpxA, Acyl- acyl carrier protein 51244699 Common - hypothetical protein DP0847 75 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 51244600 Common - hypothetical protein DP0748 64 COG1641 COG1641, Uncharacterized conserved protein Function unknown 51245254 Nonpathogen - hypothetical protein DP1402 2 None None None 51245226 Common - similar to adenine deaminase DP1374 92 COG1001 AdeC, Adenine deaminase Nucleotide transport and metabolism 51245517 Common glpX fructose 1,6-bisphosphatase II DP1665 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 51245303 Common - hypothetical protein DP1451 12 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 51245348 Nonpathogen - hypothetical protein DP1496 1 None None None 51243861 Nonpathogen - hypothetical protein DP0009 1 None None None 51244158 Common - similar to Na+/H+ antiporter protein DP0306 62 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 51245953 Nonpathogen - hypothetical protein DP2101 1 None None None 51245216 Common - ABC transporter, permease protein DP1364 203 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 51245777 Common - similar to two-component system sensory/regulatory protein (Ntr family) DP1925 222 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246468 Nonpathogen - hypothetical protein DP2616 1 None None None 51244120 Nonpathogen - hypothetical protein DP0268 5 None None None 51244129 Common - similar to protoporphyrinogen oxidase DP0277 51 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 51244524 Common - uracil phosphoribosyltransferase DP0672 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 51246019 Common - similar to bifunctional histidine biosynthesis protein (HisHF) DP2167 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 51246924 Nonpathogen - hypothetical protein DP3072 1 None None None 51246090 Common - hypothetical protein DP2238 4 None None None 161485626 Common rpsB 30S ribosomal protein S2 DP1154 225 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 51244174 Common - similar to ABC transporter, permease protein DP0322 35 COG4135 COG4135, ABC-type uncharacterized transport system, permease component General function prediction only 51245154 Common - similar to NADH dehydrogenase DP1302 182 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 51246230 Common - similar to predicted GTP-binding protein DP2378 147 COG1160 COG1160, Predicted GTPases General function prediction only 51246858 Common - hypothetical protein DP3006 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 51245959 Common - hypothetical protein DP2107 79 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51246444 Common - 50S ribosomal protein L21 DP2592 208 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 51244013 Common - similar to methyl-accepting chemotaxis protein (TlpB) DP0161 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51245341 Common - similar to two-component system sensor histidine kinase (Ntr family) DP1489 219 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 51246184 Common - piperideine-6-carboxylate dehydrogenase DP2332 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 51246389 Common clpX ATP-dependent protease ATP-binding subunit DP2537 216 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 51244147 Common - hypothetical protein DP0295 32 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 51245004 Common - DNA-directed RNA polymerase subunit alpha DP1152 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 51245561 Common - similar to D-3-phosphoglycerate dehydrogenase DP1709 230 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 51245230 Common - hypothetical protein DP1378 25 None None None 51246249 Common - molybdopterin biosynthesis protein (Mog) DP2397 190 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 51245584 Common - homoserine dehydrogenase DP1732 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 51246010 Common - transcription regulator DP2158 128 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 51244114 Nonpathogen - hypothetical protein DP0262 1 None None None 51245125 Common - ribonuclease PH DP1273 192 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 51245005 Common - 50S ribosomal protein L17 DP1153 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 51245948 Common phdB pyruvate dehydrogenase E1 component, alpha subunit DP2096 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 51245889 Common - hypothetical protein DP2037 108 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 51243986 Common - hypothetical protein DP0134 86 COG0701 COG0701, Predicted permeases General function prediction only 51246328 Common - similar to tungsten-containing aldehyde ferredoxin oxidoreductase (AOR) DP2476 57 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 51245169 Common - NADH dehydrogenase, subunit 1 DP1317 186 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 51244576 Common trkA potassium transporter peripheral membrane component DP0724 128 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 51244628 Common - similar to thiamine biosynthesis lipoprotein (ApbE) [Precursor] DP0776 142 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 51244105 Common - similar to menaquinone biosynthesis protein (MenD) DP0253 164 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 51245358 Common - H+/Na+-glutamate symporter DP1506 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 51245934 Common - hypothetical protein DP2082 2 None None None 51246553 Common - hypothetical protein DP2701 186 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51245437 Common - similar to predicted protein of phage Felix 01 DP1585 18 None None None 51245807 Common - hypothetical protein DP1955 97 COG1944 COG1944, Uncharacterized conserved protein Function unknown 51245987 Common - hypothetical protein DP2135 28 None None None 51244747 Common - dihydroxy-acid dehydratase DP0895 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 51246723 Nonpathogen - hypothetical protein DP2871 1 None None None 51246510 Common - similar to flagellar assembly protein (FliH) DP2658 10 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 51246403 Common - lipoprotein signal peptidase DP2551 204 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 51243928 Nonpathogen - hypothetical protein DP0076 1 None None None 51244261 Common - hypothetical protein DP0409 20 COG1598 COG1598, Uncharacterized conserved protein Function unknown 51244224 Common - cobalt-zinc-cadmium resistance protein (CzcB) DP0372 163 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 51246035 Common - putative aminopeptidase 2 DP2183 44 COG1362 LAP4, Aspartyl aminopeptidase Amino acid transport and metabolism 51245926 Common - hypothetical protein DP2074 33 None None None 51244731 Common - hypothetical protein DP0879 35 COG1610 COG1610, Uncharacterized conserved protein Function unknown 51246045 Common - GTP-binding protein LepA DP2193 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 51245602 Common - similar to phosphoglycerate mutase (GpmB protein) DP1750 169 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 51243977 Nonpathogen - hypothetical protein DP0125 3 None None None 51245785 Common - phosphoserine aminotransferase DP1933 129 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 51243966 Nonpathogen - hypothetical protein DP0114 1 None None None 51245628 Common - similar to potassium efflux transporter DP1776 210 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 51246408 Common - carboxy-terminal processing protease [Precursor] DP2556 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 51243949 Common - Na+/H+ antiporter DP0097 60 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 51244139 Nonpathogen - similar to sulfate permease, N-terminal fraction only DP0287 1 None None None 51245747 Nonpathogen - hypothetical protein DP1895 2 None None None 51246576 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase DP2724 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 51244151 Common - glycine dehydrogenase subunit 1 DP0299 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 51245865 Common - hypothetical protein DP2013 10 None None None 51244631 Common - hypothetical protein DP0779 48 COG2848 COG2848, Uncharacterized conserved protein Function unknown 51244442 Common - periplasmic protein DP0590 12 None None None 51245941 Nonpathogen - hypothetical protein DP2089 1 None None None 51244791 Nonpathogen - hypothetical protein DP0939 1 None None None 51246032 Common - putative manganese-dependent inorganic pyrophosphatase DP2180 60 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 51245996 Nonpathogen - hypothetical protein DP2144 1 None None None 51245740 Common - hypothetical protein DP1888 16 COG1475 Spo0J, Predicted transcriptional regulators Transcription 51246434 Common - hypothetical protein DP2582 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 51244790 Nonpathogen - hypothetical protein DP0938 1 None None None 51245609 Nonpathogen - hypothetical protein DP1757 4 None None None 51244314 Common - hypothetical protein DP0462 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 51244728 Common - para-aminobenzoate synthase component I DP0876 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 51246237 Nonpathogen - hypothetical protein DP2385 1 None None None 51246380 Nonpathogen - hypothetical protein DP2528 1 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 51246845 Common - methyl-accepting chemotaxis protein (McpB) DP2993 175 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 51246008 Common uvsE putative UV damage endonuclease DP2156 24 COG4294 Uve, UV damage repair endonuclease DNA replication, recombination, and repair 51244391 Common - similar to sigma-54 transcriptional regulator DP0539 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 51244383 Nonpathogen - hypothetical protein DP0531 2 None None None 51246740 Common - similar to histidinol-phosphatase DP2888 38 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 51245386 Nonpathogen - hypothetical protein DP1534 1 None None None 51246949 Common - cell division protein FtsH DP3097 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 51245664 Common - similar to biotin carboxylase DP1812 222 COG0439 AccC, Biotin carboxylase Lipid metabolism 51244149 Common - lipoate-protein ligase B (LipB) DP0297 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 51245118 Common - coenzyme F390 synthetase II DP1266 127 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 51244329 Common - sigma-54-dependent transcriptional regulator DP0477 177 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms