Anaplasma marginale str. St. Maries, complete genome NC_004842 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 56416925 Common pstA phosphate ABC transporter AM818 228 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 56416651 Common - hypothetical protein AM414 122 None None None 56416679 Common nuoB NADH dehydrogenase subunit B AM453 191 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 56417170 Pathogen opag1 msp2 operon associated gene 1 AM1143 1 None None None 56416682 Common nusB N utilization substance protein B AM457 40 COG0781 NusB, Transcription termination factor Transcription 56416871 Pathogen - hypothetical protein AM742 3 None None None 56417136 Common purH phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) AM1099 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 56416476 Common radA DNA repair protein RadA AM157 212 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 56416824 Common - hypothetical protein AM660 4 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 56416973 Pathogen - hypothetical protein AM880 1 None None None 56416998 Common rplV 50S ribosomal protein L22 AM907 182 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 56417168 Pathogen - hypothetical protein AM1141 1 None None None 56416495 Pathogen msp1B-1 major surface protein 1B-1 AM180 1 None None None 56417066 Common hslU ATP-dependent protease ATP-binding subunit AM999 209 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 56416879 Common fadB 3-hydroxyacyl-COA dehydrogenase bO272.3 AM752 30 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56417260 Common - hypothetical protein AM1278 4 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 56417043 Common glpX fructose 1,6-bisphosphatase II AM964 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 56416739 Pathogen - hypothetical protein AM537 1 None None None 56416886 Common hemF coproporphyrinogen III oxidase AM762 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 56417312 Common - hypothetical protein AM1350 68 COG1981 COG1981, Predicted membrane protein Function unknown 56416835 Pathogen - hypothetical protein AM675 1 None None None 56416375 Common - hypothetical protein AM006 147 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 56417072 Common coxA cytochrome c oxidase subunit I AM1008 164 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 56417267 Common ubiH 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase AM1289 114 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 56417297 Common xseA exodeoxyribonuclease large subunit AM1327 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 56417191 Common - hypothetical protein AM1181 3 None None None 56417303 Common - hypothetical protein AM1337 80 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56417019 Common qor quinone oxidoreductase AM928 190 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 56417161 Common recJ single-stranded-DNA-specific exonuclease AM1133 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 56416402 Common orfX ORF X AM044 3 None None None 56416759 Common ubiG 3-demethylubiquinone-9 3-methyltransferase AM566 124 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56416386 Pathogen - hypothetical protein AM020 1 None None None 56417189 Pathogen - hypothetical protein AM1179 2 COG5454 COG5454, Predicted secreted protein Function unknown 56416764 Common gcp O-sialoglycoprotein endopeptidase AM572 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 161544976 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase AM1331 159 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 56417086 Common tolC outer membrane protein AM1024 100 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56416885 Pathogen - hypothetical protein AM760 1 None None None 56417306 Common rplY 50S ribosomal protein L25/general stress protein Ctc AM1340 194 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 56416936 Common - hypothetical protein AM832 203 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 56416772 Pathogen - hypothetical protein AM582 1 None None None 56417186 Common greA transcription elongation factor greA AM1173 204 COG0782 GreA, Transcription elongation factor Transcription 56417032 Common - hypothetical protein AM947 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56416967 Common pstB phosphate ABC transporter AM872 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 56416826 Common pyrB aspartate carbamoyltransferase catalytic subunit AM662 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 56416723 Common - hypothetical protein AM516 121 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56416861 Common orfX ORF X AM723 3 None None None 56416663 Pathogen - hypothetical protein AM431 1 None None None 56416637 Common znuA high-affinity zinc uptake system protein AM396 152 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 56416706 Common ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase AM493 186 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 56417111 Common - hypothetical protein AM1066 224 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 56416947 Common - putative monovalent cation/H+ antiporter subunit B AM848 23 COG1563 COG1563, Predicted subunit of the Multisubunit Na+/H+ antiporter Inorganic ion transport and metabolism 56417107 Common orfX ORF X AM1061 3 None None None 56416647 Common pkcI protein kinase C inhibitor 1 AM409 227 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 56417038 Common pepA leucyl aminopeptidase AM956 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 56416623 Pathogen - hypothetical protein AM375 2 COG4649 COG4649, Uncharacterized protein conserved in bacteria Function unknown 56417234 Pathogen - hypothetical protein AM1239 1 None None None 56416570 Common thiD phosphomethylpyrimidine kinase AM295 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 56417311 Common - hypothetical protein AM1349 59 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 161544993 Pathogen rpsU 30S ribosomal protein S21 AM233 2 None None None 56417284 Common infC translation initiation factor IF-3 AM1311 152 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 56416434 Common rrf hypothetical protein AM102 42 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56416756 Common - hypothetical protein AM562 21 COG1714 COG1714, Predicted membrane protein/domain Function unknown 56417304 Common purF amidophosphoribosyltransferase AM1338 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 56416749 Common - hypothetical protein AM555 88 COG1295 Rbn, Predicted membrane protein Function unknown 56416601 Common fabB 3-oxoacyl-(acyl-carrier-protein) synthase II AM338 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56416460 Common purC phosphoribosoylaminoimidazole-succinocarboxamide synthase AM137 182 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 56416443 Common - hypothetical protein AM116 78 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 56416436 Common ppnK inorganic polyphosphate/ATP-NAD kinase AM106 174 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 56416721 Common aatA aspartate aminotransferase A AM514 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56416658 Common ssb single-strand binding protein AM424 190 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 56416993 Common rplN 50S ribosomal protein L14 AM901 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 56416714 Common - hypothetical protein AM504 40 COG3814 COG3814, Uncharacterized protein conserved in bacteria Function unknown 56417318 Common ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthetase AM1356 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 56416809 Common nuoH NADH dehydrogenase subunit H AM640 187 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 56417039 Common - hypothetical protein AM957 221 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 56416867 Common nusA transcription elongation factor NusA AM736 216 COG0195 NusA, Transcription elongation factor Transcription 56416813 Common ubiX 3-octaprenyl-4-hydroxybenzoate carboxyl-lyase AM645 154 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 56416588 Common - hypothetical protein AM321 39 None None None 56416385 Common secG preprotein translocase subunit SecG AM019 3 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 56416956 Common nrdA ribonucleotide-diphosphate reductase subunit alpha AM860 220 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 56416914 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AM804 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 56416892 Pathogen - hypothetical protein AM773 1 None None None 56416569 Pathogen pep1 hypothetical protein AM294 2 None None None 56416730 Common rpsO 30S ribosomal protein S15 AM525 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 56416399 Common gltX glutamyl-tRNA synthetase AM039 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 56416904 Common tsf elongation factor Ts AM791 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 56417188 Common atpH ATP synthase delta chain AM1175 115 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 56416564 Common dnaE DNA polymerase III alpha subunit AM287 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 56417162 Pathogen - hypothetical protein AM1135 1 None None None 56416940 Common ffh signal recognition particle protein AM839 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 56417157 Common dksA dnaK suppressor protein AM1126 139 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 56417008 Common rpsA 30S ribosomal protein S1 AM917 214 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 56416800 Common dnaQ DNA polymerase III epsilon chain AM625 195 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 56416413 Pathogen orfY ORF Y AM063 2 None None None 56417177 Pathogen - hypothetical protein AM1161 1 None None None 56416482 Common glyA glycine/serine hydroxymethyltransferase AM164 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 56417289 Common virB8 VirB8 protein AM1316 28 COG3736 VirB8, Type IV secretory pathway, component VirB8 Intracellular trafficking and secretion 56416798 Common nuoD NADH dehydrogenase subunit D AM623 192 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 56416512 Common gor glutathione reductase AM215 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 56417217 Common recF recombination protein F AM1218 148 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 56417108 Common msp3 major surface protein 3 AM1063 3 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 56417210 Pathogen - hypothetical protein AM1209 2 None None None 56416741 Pathogen - hypothetical protein AM541 1 None None None 56416554 Common pyrD dihydroorotate dehydrogenase 2 AM273 236 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 56416634 Common - hypothetical protein AM392 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 56416686 Common psd phosphatidylserine decarboxylase AM463 94 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 56417059 Common gpsA gylcerol-3-phosphate dehydrogenase AM985 210 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 56416616 Pathogen - hypothetical protein AM360 1 None None None 56417104 Pathogen - hypothetical protein AM1057 1 None None None 56417052 Pathogen - hypothetical protein AM977 3 None None None 56416596 Common mutL DNA mismatch repair protein AM332 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 56416844 Common - hypothetical protein AM686 188 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 56417042 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA AM961 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 56416607 Pathogen - hypothetical protein AM346 1 None None None 56416966 Common tgt queuine tRNA-ribosyltransferase AM871 228 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 56416440 Common - hypothetical protein AM112 72 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 56416553 Common - pantothenate kinase AM271 102 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 56417219 Pathogen omp7 outer membrane protein 7 AM1220 2 None None None 56417067 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase AM1000 209 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56417169 Common opag2 msp2 operon associated gene 2 AM1142 3 None None None 56416878 Common nuoF NADH dehydrogenase chain F AM750 168 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 56416394 Pathogen orfY ORF Y AM032 2 None None None 56416376 Common - hypothetical protein AM007 91 COG0789 SoxR, Predicted transcriptional regulators Transcription 161544983 Common groES co-chaperonin GroES AM943 207 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 56416732 Common - hypothetical protein AM527 61 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56416937 Common - hypothetical protein AM833 54 COG3577 COG3577, Predicted aspartyl protease General function prediction only 56416542 Common rplK 50S ribosomal protein L11 AM258 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 56416484 Common msbA2 ABC efflux transporter AM167 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 56417296 Common pgk phosphoglycerate kinase AM1326 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 56416926 Pathogen - hypothetical protein AM819 1 None None None 56416516 Pathogen - hypothetical protein AM219 2 None None None 56416972 Pathogen - hypothetical protein AM879 1 None None None 56416652 Common - hypothetical protein AM415 124 None None None 56416453 Common - hypothetical protein AM127 35 None None None 56416870 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase AM741 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 56417246 Pathogen omp13 outer membrane protein 13 AM1258 2 None None None 56416807 Pathogen - hypothetical protein AM634 1 None None None 56416742 Pathogen - hypothetical protein AM543 1 None None None 56416602 Common acpP acyl carrier protein AM339 148 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56416815 Pathogen - hypothetical protein AM649 1 None None None 161544991 Common ribH riboflavin synthase subunit beta AM458 221 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 56417272 Common nadC nicotinate-nucleotide pyrophosphorylase AM1297 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 56417222 Pathogen omp10 outer membrane protein 10 AM1223 2 None None None 56417033 Common clpB ATP-dependent clp protease ATP-binding subunit AM949 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 56417200 Pathogen - hypothetical protein AM1193 1 None None None 56416812 Common gyrB2 DNA gyrase subunit B AM644 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 56417261 Common dnaZ DNA polymerase III gamma subunit AM1280 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 56417190 Common - hypothetical protein AM1180 19 COG3898 COG3898, Uncharacterized membrane-bound protein Function unknown 56417110 Common hflC hflC protein AM1065 208 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 56416851 Common hemC porphobilinogen deaminase AM700 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 56416504 Common aspS asparaginyl-tRNA synthetase AM199 247 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416425 Common pyrE orotate phosphoribosyltransferase AM087 89 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 56416769 Common - hypothetical protein AM579 3 COG5437 COG5437, Predicted secreted protein Function unknown 56416646 Common dapA dihydrodipicolinate synthase AM407 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 56416383 Common ribD riboflavin biosynthesis protein AM015 228 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 56417018 Common - hypothetical protein AM927 215 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 56416403 Pathogen orfY ORF Y AM046 2 None None None 56416510 Common ntrX nitrogen assimilation regulatory protein AM207 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56416799 Common nuoE NADH dehydrogenase subunit E AM624 155 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 56417158 Common dtbS dethiobiotin synthase AM1128 152 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 56416472 Common ligA DNA ligase AM152 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 56417085 Common rplM 50S ribosomal protein L13 AM1023 215 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 56416535 Common - hypothetical protein AM248 6 None None None 56417092 Common apaG ApaG AM1035 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 56416827 Common - putative translaldolase AM664 155 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 56417185 Common ribA 3,4-dihydroxy-2-butanone 4-phosphate synthase AM1172 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 56416869 Common tatC Sec-independent protein translocase protein AM740 204 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 56417011 Pathogen - hypothetical protein AM920 2 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 56416527 Common cybB cytochrome b561 AM238 88 COG3038 CybB, Cytochrome B561 Energy production and conversion 56417003 Common rplC 50S ribosomal protein L3 AM912 218 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 56416585 Common - hypothetical protein AM316 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 56417268 Common - hypothetical protein AM1292 3 None None None 56417319 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase AM1357 194 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 56416828 Common atpC ATP synthase epsilon chain AM665 3 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 56416650 Pathogen - hypothetical protein AM413 1 None None None 56416786 Common obgE GTPase ObgE AM601 249 COG0536 Obg, Predicted GTPase General function prediction only 56416473 Common grxC2 glutaredoxin-like protein GRLA AM153 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 56416912 Common yibO phosphoglyceromutase AM802 126 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 56416711 Common - hypothetical protein AM500 3 None None None 56416536 Common rpsL 30S ribosomal protein S12 AM249 246 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 56416563 Common - hypothetical protein AM286 4 None None None 56416580 Common clpP ATP-dependent clp protease proteolytic subunit AM309 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56417163 Common pcnB poly (A) polymerase AM1136 203 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 56416696 Common - hypothetical protein AM480 39 COG3932 COG3932, Uncharacterized ABC-type transport system, permease components General function prediction only 56417233 Pathogen - hypothetical protein AM1238 1 None None None 56416979 Common rplQ 50S ribosomal protein L17 AM886 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 56417250 Common parB chromosome partitioning protein AM1267 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 56417135 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase AM1098 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 56416463 Common coxW cytochrome C oxidase assembly protein AM141 46 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 56417073 Common ctaB protoheme IX farnesyltransferase AM1009 170 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 56417144 Pathogen - hypothetical protein AM1111 1 None None None 56416483 Pathogen - hypothetical protein AM166 3 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 56416669 Common thiC thiamine biosynthesis protein ThiC AM440 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 56417283 Common ilvC ketol-acid reductoisomerase AM1310 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 56416992 Common rplX 50S ribosomal protein L24 AM900 179 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 56417121 Common lspA lipoprotein signal peptidase AM1081 189 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56416955 Common - hypothetical protein AM859 179 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 56416866 Common infB translation initiation factor IF-2 AM735 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 56417257 Common - hypothetical protein AM1275 183 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 56416726 Common - hypothetical protein AM520 37 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 56416635 Common recR recombination protein AM394 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 56416755 Common - hypothetical protein AM561 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 56417058 Common xerC integrase/recombinase ripx AM984 226 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56416435 Common guaB inosine monophosphate dehydrogenase AM105 242 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 56416537 Common rpsG 30S ribosomal protein S7 AM250 244 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 56416617 Pathogen - hypothetical protein AM366 1 None None None 56416540 Pathogen secE preprotein translocase subunit SecE AM255 2 None None None 56416687 Common - hypothetical protein AM465 93 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 56417105 Pathogen - hypothetical protein AM1058 1 None None None 56416847 Common prfB peptide chain release factor 2 AM692 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 56417051 Pathogen - hypothetical protein AM976 1 None None None 56416541 Common nusG transcription antitermination protein AM256 214 COG0250 NusG, Transcription antiterminator Transcription 56416515 Common - hypothetical protein AM218 3 None None None 56417176 Pathogen omp3 outer membrane protein 3 AM1159 1 None None None 56416777 Common rlpA rare lipoprotein A precursor AM590 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 56416995 Common rpmC 50S ribosomal protein L29 AM904 3 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 161544994 Common rpmE 50S ribosomal protein L31 AM108 34 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 56416750 Common bioA adenosylmethionine-8-amino-7-oxononanoate aminotransferase AM556 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 56416595 Common tolQ TolQ protein AM330 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 56417026 Common pyrC dihydroorotase AM939 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 56416945 Common - putative monovalent cation/H+ antiporter subunit C AM846 42 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 56416465 Common ccmA heme exporter protein AM144 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 56416802 Pathogen - hypothetical protein AM628 1 None None None 56417184 Common smpB SsrA-binding protein AM1171 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 56416934 Common - hypothetical protein AM829 5 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 56416774 Common fabG 3-oxoacyl-reductase AM584 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56417093 Common purK phosphoribosylaminoimidazole carboxylase AM1036 195 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 56417034 Pathogen - hypothetical protein AM950 1 None None None 56416810 Common nuoG NADH dehydrogenase subunit G AM641 192 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 161544990 Common yidC putative inner membrane protein translocase component YidC AM460 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 56417088 Common - hypothetical protein AM1027 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56416796 Common folE GTP cyclohydrolase AM619 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 56416448 Pathogen - hypothetical protein AM122 1 None None None 56416890 Common pccB propionyl-COA carboxylase beta chain precursor AM769 210 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 56417245 Pathogen omp12 outer membrane protein 12 AM1257 2 None None None 56416576 Common - hypothetical protein AM303 5 COG0456 RimI, Acetyltransferases General function prediction only 56417258 Common - hypothetical protein AM1276 86 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 56416411 Common rpsP 30S ribosomal protein S16 AM059 201 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 56416452 Common rnhA ribonuclease H AM126 178 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 56416850 Common folC folylpolyglutamate synthase AM699 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 56416980 Common rpoA DNA-directed RNA polymerase subunit alpha AM887 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 56417212 Common - hypothetical protein AM1212 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 56417224 Pathogen - hypothetical protein AM1226 1 None None None 56416524 Common pstS phosphate ABC transporter, periplasmic phosphate-binding protein AM235 108 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 56417218 Pathogen omp6 outer membrane protein 6 AM1219 1 None None None 56417183 Common valS valyl-tRNA synthetase AM1170 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416475 Common - hypothetical protein AM156 88 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 161544978 Common rpsT 30S ribosomal protein S20 AM1233 20 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 56416984 Common secY preprotein translocase subunit SecY AM892 221 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 56416503 Common - hypothetical protein AM198 45 COG0546 Gph, Predicted phosphatases General function prediction only 161544984 Common rplP 50S ribosomal protein L16 AM905 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 56417113 Common rnc ribonuclease III AM1069 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 56416960 Common dnaB replicative DNA helicase AM865 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 56417150 Common mesJ cell cycle protein AM1117 209 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 56416873 Common nuoN1 NADH dehydrogenase chain N AM744 209 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 56416408 Common pheS phenylalanyl tRNA synthetase alpha subunit AM055 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 56416761 Pathogen - hypothetical protein AM569 2 None None None 56417314 Pathogen - hypothetical protein AM1352 1 None None None 56417074 Common - hypothetical protein AM1010 128 COG4105 ComL, DNA uptake lipoprotein General function prediction only 56417054 Common - hypothetical protein AM980 187 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 56416621 Common gyrA DNA gyrase subunit A AM372 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 56416615 Pathogen - hypothetical protein AM359 1 None None None 56416859 Common orfX ORF X AM717 3 None None None 56416599 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase AM335 213 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 56417045 Common - hypothetical protein AM967 6 COG5388 COG5388, Uncharacterized protein conserved in bacteria Function unknown 56416978 Common pheT phenylalanyl-tRNA synthetase beta chain AM885 235 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 56416674 Common - hypothetical protein AM447 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 56417002 Common rplD 50S ribosomal protein L4 AM911 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 56416653 Common nadE NH3-dependent NAD+ synthetase protein AM416 214 COG0171 NadE, NAD synthase Coenzyme metabolism 56416717 Common - hypothetical protein AM508 4 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 56416822 Common - hypothetical protein AM657 88 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 56417273 Common - hypothetical protein AM1298 170 COG0344 COG0344, Predicted membrane protein Function unknown 56416811 Common - hypothetical protein AM642 5 None None None 56416377 Common - hypothetical protein AM008 2 None None None 56416689 Common murG UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine) AM471 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 56417089 Common prsA phosphoribosylpyrophosphate synthetase AM1028 243 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 56416604 Common - hypothetical protein AM342 4 None None None 56416423 Common orfX ORF X AM082 3 None None None 56416379 Common murC UDP-N-acetylmuramate-alanine ligase AM010 207 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 56416938 Common - hypothetical protein AM836 31 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 56417301 Common dfp phosphopantothenoylcysteine decarboxylase AM1335 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 56416670 Common - hypothetical protein AM441 49 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 56417269 Common glyQ glycyl-tRNA synthetase subunit alpha AM1294 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 56417251 Common rimM 16S rRNA processing protein AM1269 135 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 56416528 Common - hypothetical protein AM240 149 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 56416825 Common truA tRNA pseudouridine synthase A AM661 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 56416429 Common - hypothetical protein AM093 36 None None None 56416898 Common petC cytochrome c1, heme protein precursor AM781 74 COG2857 CYT1, Cytochrome c1 Energy production and conversion 56416860 Pathogen orfY ORF Y AM721 2 None None None 56416688 Pathogen - hypothetical protein AM470 1 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 56416719 Common trxB thioredoxin reductase AM510 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 56417127 Common - hypothetical protein AM1088 183 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 56417175 Pathogen omp2 outer membrane protein 2 AM1156 1 None None None 56417024 Common fumC fumarate hydratase AM937 232 COG0114 FumC, Fumarase Energy production and conversion 56416420 Common - hypothetical protein AM074 92 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 56416557 Common - hypothetical protein AM279 30 COG3621 COG3621, Patatin General function prediction only 56416994 Common rpsQ 30S ribosomal protein S17 AM903 106 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 56416690 Common efp elongation factor PEF-P AM472 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 56416767 Common - hypothetical protein AM576 31 COG5410 COG5410, Uncharacterized protein conserved in bacteria Function unknown 56416946 Common - putative monovalent cation/H+ antiporter subunit B AM847 88 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 56416556 Common - hypothetical protein AM276 90 COG0400 COG0400, Predicted esterase General function prediction only 56417204 Common - hypothetical protein AM1200 26 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 56416538 Common fusA elongation factor G AM253 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 56416842 Common ileS isoleucyl-tRNA synthetase AM684 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416533 Common - hypothetical protein AM245 150 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 56416380 Common murC UDP-N-acetylmuramate-alanine ligase AM011 207 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 56416598 Common smf DNA processing protein, chain A AM334 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 56417014 Common - hypothetical protein AM923 94 COG1485 COG1485, Predicted ATPase General function prediction only 56416372 Common purE phosphoribosylaminoimidazole carboxylase catalytic subunit AM001 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 56416562 Common bolA bolA like protein AM285 54 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 56416758 Common mdh malate dehydrogenase AM564 192 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 56416785 Common eno Enolase 1 (2-phosphoglycerate dehydratase 1) AM600 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 56416779 Pathogen - hypothetical protein AM592 2 None None None 56417290 Common ribA GTP cyclohydrolase II AM1317 175 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 56416906 Common maf maf protein AM793 189 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 56416971 Pathogen aaaP appendage-associated protein AM878 1 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 56417143 Common atpB F0F1 ATP synthase subunit A AM1110 207 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 56417225 Common - hypothetical protein AM1228 3 None None None 56416478 Common - hypothetical protein AM160 5 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 56416645 Common - hypothetical protein AM406 50 COG4653 COG4653, Predicted phage phi-C31 gp36 major capsid-like protein General function prediction only 56416462 Common - hypothetical protein AM139 62 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 56416387 Common xerD integrase/recombinase AM021 227 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56417236 Pathogen - hypothetical protein AM1241 1 None None None 56416665 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ AM434 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 56416548 Common rnhB ribonuclease HII AM264 207 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 56416432 Common trbG conjugal transfer protein trbG precursor AM097 57 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 56416493 Common - hypothetical protein AM178 66 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 161544977 Common - hypothetical protein AM1305 66 COG4695 COG4695, Phage-related protein Function unknown 56417302 Common recG ATP-dependent DNA helicase AM1336 230 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 56416620 Pathogen - hypothetical protein AM371 1 None None None 56417313 Common pdhB pyruvate dehydrogenase subunit beta AM1351 224 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 56417134 Common - hypothetical protein AM1097 12 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 56417179 Pathogen - hypothetical protein AM1165 1 None None None 56416697 Common cysS cysteinyl-tRNA synthetase AM481 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416464 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase AM142 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 56416632 Common gst glutathione S-transferase AM390 110 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56416586 Common thiE thiamin monophosphate synthase AM318 205 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 56417120 Common - hypothetical protein AM1080 201 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 56416737 Pathogen mlp3 major surface protein 1a-like protein 3 AM535 1 None None None 56417064 Pathogen - hypothetical protein AM997 1 None None None 56416710 Common - hypothetical protein AM499 106 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 56416954 Common - hypothetical protein AM858 249 COG0536 Obg, Predicted GTPase General function prediction only 56416911 Common engA GTP-binding protein EngA AM801 231 COG1160 COG1160, Predicted GTPases General function prediction only 56416568 Common sdhD succinate dehyrdrogenase subunit D AM292 5 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 56416837 Common argS arginyl-tRNA synthetase AM678 245 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416712 Common - hypothetical protein AM501 221 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 56416400 Common - hypothetical protein AM041 17 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56417287 Common virB10 VirB10 protein AM1314 57 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 56416583 Common fmt methionyl-tRNA formyltransferase AM313 224 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 56416418 Pathogen - hypothetical protein AM072 1 None None None 56417155 Common czcD cation efflux system protein AM1123 191 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 56417274 Common ruvC holliday (crossover) junction endodeoxyribonuclease AM1299 194 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 56417223 Pathogen - hypothetical protein AM1225 1 None None None 56417112 Pathogen - hypothetical protein AM1067 2 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 56416985 Common rplO 50S ribosomal protein L15 AM893 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 56416718 Common coaD phosphopantetheine adenylyltransferase AM509 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 56417192 Common - hypothetical protein AM1183 162 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 56416433 Common pdhA pyruvate dehydrogenase E1 component, alpha subunit precursor AM101 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 56417151 Common ftsH cell division protein AM1119 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 56416901 Pathogen - hypothetical protein AM788 1 None None None 56416863 Common clpA ATP-dependent clp protease ATP-binding subunit AM731 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 56416401 Common - hypothetical protein AM042 188 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 56417300 Common trmE tRNA modification GTPase TrmE AM1332 221 COG0486 ThdF, Predicted GTPase General function prediction only 56416944 Common rne ribonuclease E AM844 184 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 56417149 Common trkH potassium uptake protein AM1116 121 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 56416474 Common - hypothetical protein AM154 57 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 56416644 Common kgd alpha-ketoglutarate decarboxylase AM405 149 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 56416935 Common - hypothetical protein AM830 24 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 56417182 Common ccmF cytochrome c-type biogenesis protein AM1169 131 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 56416858 Pathogen - hypothetical protein AM715 1 None None None 56416780 Common rpmJ large subunit ribosomal protein L36 AM593 67 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 56417202 Common pbpA1 penicillin-binding protein AM1196 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 56417035 Pathogen - hypothetical protein AM952 1 None None None 56417087 Common - hypothetical protein AM1025 5 COG3827 COG3827, Uncharacterized protein conserved in bacteria Function unknown 56416447 Common ribA riboflavin synthase subunit alpha AM120 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 56416752 Common ksgA dimethyladenosine transferase AM558 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 56416575 Common - hypothetical protein AM302 27 None None None 56416747 Pathogen - hypothetical protein AM551 1 None None None 56416449 Pathogen msp1B-2 major surface protein 1B-2 AM123 1 None None None 56416605 Common - hypothetical protein AM343 36 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 56416671 Common rpoZ DNA-directed RNA polymerase omega subunit AM442 26 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 56416610 Common coq7 ubiquinone biosynthesis protein AM349 48 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 56416664 Common - hypothetical protein AM432 150 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 56416422 Common orfX ORF X AM077 3 None None None 56416486 Common sdhB succinate dehydrogenase iron-sulfur subunit AM169 195 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 56416378 Pathogen - hypothetical protein AM009 1 None None None 56416939 Common era GTP-binding protein Era AM837 222 COG1159 Era, GTPase General function prediction only 56417098 Pathogen - hypothetical protein AM1050 2 COG3743 COG3743, Uncharacterized conserved protein Function unknown 56416968 Common dapB dihydrodipicolinate reductase AM873 213 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 56417298 Common - hypothetical protein AM1328 6 None None None 56416762 Common rpiB ribose 5-phosphate isomerase AM570 127 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 56416705 Common - hypothetical protein AM492 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 56416961 Common - hypothetical protein AM867 3 None None None 56416642 Common - hypothetical protein AM402 24 None None None 56416654 Common hemB delta-aminolevulinic acid dehydratase AM417 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 56416698 Common nrdF ribonucleotide-diphosphate reductase subunit beta AM483 158 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 56416970 Common ubiA prenyltransferase AM876 164 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 56416600 Common - hypothetical protein AM336 109 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 56416622 Common nth endonuclease III AM373 238 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 56417315 Common tldD tldD protein AM1353 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 56416477 Common - hypothetical protein AM159 67 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 56416872 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM743 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 56417012 Pathogen - hypothetical protein AM921 1 None None None 56416675 Common pyrF orotidine 5'-phosphate decarboxylase AM448 172 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 56416887 Common agk acetylglutamate kinase AM763 210 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 56416724 Common - hypothetical protein AM517 103 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 56416502 Pathogen - hypothetical protein AM197 3 None None None 56416868 Common acrD acriflavin resistance protein D AM738 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 56416597 Common mutL DNA mismatch repair protein AM333 155 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 56416633 Common - hypothetical protein AM391 13 COG4233 COG4233, Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56416757 Common folB dihydroneopterin aldolase AM563 9 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 56416893 Common gltX2 glutamyl-tRNA synthetase AM775 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 56416521 Common sucD succinyl-CoA ligase chain A AM230 206 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 56417013 Common hemH ferrochelatase AM922 166 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 56417053 Common - hypothetical protein AM979 120 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 56417259 Common asd aspartate-semialdehyde dehydrogenase AM1277 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 56416853 Common ankA ankyrin AM705 22 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 56416845 Pathogen - hypothetical protein AM688 2 None None None 56416907 Common infA translation initiation factor IF-1 AM795 208 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 56417164 Common ndk nucleoside diphosphate kinase AM1137 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 56416412 Common proP1 proline/betaine transport protein AM060 132 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 56416899 Common petB cytochrome B AM783 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 56416513 Pathogen - hypothetical protein AM216 2 None None None 56416797 Common atpG ATP synthase gamma chain AM620 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 56416589 Common ftsK cell division protein AM322 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 56416691 Common suhB extragenic suppressor protein AM473 157 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 161544992 Common rplA 50S ribosomal protein L1 AM259 246 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 56416428 Common - hypothetical protein AM092 22 COG0679 COG0679, Predicted permeases General function prediction only 56416547 Common rpoC DNA-directed RNA polymerase beta' chain AM263 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 56417102 Common - hypothetical protein AM1055 3 None None None 56417174 Common orfX ORF X AM1149 3 None None None 56416685 Common pssA CDP-diacylglycerol--serine O-phosphatidyltransferase AM462 150 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 56416771 Common - hypothetical protein AM581 4 None None None 56416969 Common - hypothetical protein AM875 112 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 161544981 Common atpE F0F1 ATP synthase subunit C AM1112 4 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 56416643 Common - hypothetical protein AM404 25 COG5449 COG5449, Uncharacterized conserved protein Function unknown 56416611 Pathogen - hypothetical protein AM351 1 None None None 56417126 Common sucB dihydrolipoamide acetyltransferase component AM1087 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 56417025 Common - hypothetical protein AM938 229 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 56417044 Common - hypothetical protein AM965 137 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 56416419 Common - hypothetical protein AM073 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 56417211 Common mkl ribonucleotide transport ATP-binding protein AM1210 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 56416768 Pathogen - hypothetical protein AM578 2 None None None 56416451 Common mfd transcription repair coupling factor AM125 218 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 56416534 Pathogen - hypothetical protein AM247 1 None None None 56417262 Common gapB NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase AM1283 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 56416834 Pathogen - hypothetical protein AM673 1 None None None 56416555 Common - hypothetical protein AM275 201 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 56416910 Common - hypothetical protein AM798 50 COG1520 COG1520, FOG: WD40-like repeat Function unknown 56416525 Common msp5 major surface protein 5 AM236 100 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 56416393 Common orfX ORF X AM030 3 None None None 56416584 Common - hypothetical protein AM315 108 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 56416561 Common metC cystathionine beta-lyase AM284 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 56417115 Pathogen - hypothetical protein AM1073 1 None None None 56416606 Pathogen - hypothetical protein AM345 1 None None None 56417065 Common hslV ATP-dependent protease peptidase subunit AM998 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 56416467 Common dcd deoxycytidine triphosphate deaminase AM147 150 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 56416924 Common sodB Fe superoxide dismutase AM816 207 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 56416409 Common - hypothetical protein AM056 146 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56416567 Pathogen - hypothetical protein AM291 1 None None None 56417291 Common - hypothetical protein AM1319 31 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 56416489 Common ruvB Holliday junction DNA helicase B AM172 224 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 56417156 Common ccmB heme exporter protein B AM1125 46 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 56416485 Common sdhA succinate dehydrogenase flavoprotein subunit AM168 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 56417252 Common trmD tRNA (guanine-N1)-methyltransferase AM1270 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 56417193 Common - hypothetical protein AM1185 17 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 56416446 Common - hypothetical protein AM119 45 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 56416388 Common phnL ATP transporter ATP-binding protein AM023 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 56416455 Common frr ribosome recycling factor AM130 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 56417142 Common - hypothetical protein AM1109 73 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 56416740 Common - hypothetical protein AM540 8 None None None 56417235 Pathogen - hypothetical protein AM1240 1 None None None 56417178 Pathogen omp4 outer membrane protein 4 AM1164 2 None None None 56417075 Common purD phosphoribosylamine-glycine ligase AM1011 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 56417240 Pathogen - hypothetical protein AM1248 2 None None None 56416441 Common - hypothetical protein AM113 41 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 56416494 Common folD methylenetetrahydrofolate dehydrogenase AM179 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 56416823 Common lysK lysyl-tRNA synthetase AM658 77 COG1384 LysS, Lysyl-tRNA synthetase (class I) Translation, ribosomal structure and biogenesis 56417281 Common nadA quinolinate synthetase AM1307 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 56416819 Common nifU scaffold protein AM654 140 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 56416454 Common pyrH uridylate kinase AM128 238 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 56416788 Common mraW S-adenosyl-methyltransferase MraW AM605 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 56417264 Common - isoprenoid biosynthesis protein with amidotransferase-like domain AM1286 38 COG3155 ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 56417056 Common - hypothetical protein AM982 3 COG5385 COG5385, Uncharacterized protein conserved in bacteria Function unknown 56416389 Common maeB malic enzyme AM024 209 COG0281 SfcA, Malic enzyme Energy production and conversion 56416953 Common purA adenylosuccinate synthetase AM856 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 56417292 Pathogen - hypothetical protein AM1320 1 None None None 56416793 Pathogen - hypothetical protein AM616 1 None None None 56416806 Pathogen - hypothetical protein AM632 2 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 56416416 Common - hypothetical protein AM070 94 COG2835 COG2835, Uncharacterized conserved protein Function unknown 56416897 Common - hypothetical protein AM780 3 None None None 56416818 Common hscB chaperone protein AM652 55 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 56416748 Common thiL thiamin-monophosphate kinase AM552 181 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 56416406 Common rpmI 50S ribosomal protein L35 AM053 44 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 56416395 Pathogen - hypothetical protein AM034 2 None None None 56416565 Common rrs 3-phosphoshikimate 1-carboxyvinyltransferase AM289 104 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 56417133 Common oma87 outer membrane protein AM1096 157 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 56417275 Common coxC cytochrome C oxidase subunit III AM1300 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 56416571 Common - hypothetical protein AM296 98 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 56416627 Pathogen - hypothetical protein AM382 1 None None None 56416487 Common thyX FAD-dependent thymidylate synthase AM170 47 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 56416699 Common - hypothetical protein AM485 58 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56417077 Common glmS glucosamine--fructose-6-phosphate aminotransferase AM1013 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 56417141 Common - hypothetical protein AM1108 89 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 56417125 Common map methionine aminopeptidase AM1086 248 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 56417028 Common lipB lipoyltransferase AM941 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 56417114 Common cox11 cytochrome C oxidase assembly protein AM1070 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 56416997 Common rpsC 30S ribosomal protein S3 AM906 248 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 56416733 Common lepA GTP-binding protein LepA AM528 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 56416692 Common rluC ribosomal large subunit pseudouridine synthase AM474 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 56416840 Pathogen - hypothetical protein AM682 1 None None None 56416498 Common - hypothetical protein AM189 50 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56416745 Pathogen - hypothetical protein AM547 1 None None None 56416430 Pathogen - hypothetical protein AM094 2 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 56417231 Common def N-formylmethionylaminoacyl-tRNA deformylase AM1236 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 56416390 Common - hypothetical protein AM025 10 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 56417041 Common purQ phosphoribosylformylglycinamidine synthase AM960 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 56417022 Common carB carbamoyl phosphate synthase large subunit AM933 233 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 56417021 Common folP dihydropteroate synthase AM931 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 56416849 Common gatA glutamyl-tRNA amidotransferase chain A AM698 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 56416804 Common - hypothetical protein AM630 14 None None None 56416862 Common typA GTP-binding protein AM730 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 56416751 Common - hypothetical protein AM557 8 COG5389 COG5389, Uncharacterized protein conserved in bacteria Function unknown 56416628 Common purB adenylosuccinate lyase protein AM384 237 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 56417206 Common tyrS tyrosyl-tRNA synthetase AM1205 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56417238 Common uvrB excinuclease ABC subunit B AM1243 231 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 56416830 Common mgtE magnesium transporter AM668 171 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 56416501 Common ppdK pyruvate phosphate dikinase AM195 236 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56417061 Common orfX ORF X AM989 3 None None None 56417253 Common rplS 50S ribosomal protein L19 AM1271 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 56416522 Common sucC succinyl-CoA synthetase beta chain AM231 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 56416908 Common - hypothetical protein AM796 132 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56417248 Common - hypothetical protein AM1264 197 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 56417099 Pathogen - hypothetical protein AM1051 2 None None None 56416558 Common pdxH pyridoxamine 5-phosphate oxidase AM281 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 56417214 Common polA DNA polymerase I AM1214 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 56416962 Common ssnA cytosine deaminase AM868 199 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 56416546 Common rpoB DNA-directed RNA polymerase subunit beta AM262 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 56416852 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase AM701 207 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 56416592 Common barA histidine kinase sensor protein AM327 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56416928 Pathogen - hypothetical protein AM821 2 None None None 161544982 Common acnA aconitate hydratase AM1032 223 COG1048 AcnA, Aconitase A Energy production and conversion 56417090 Pathogen - hypothetical protein AM1030 1 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 56416488 Common bcr2 bicyclomycin resistance protein AM171 183 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56416579 Common tig trigger factor AM308 202 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 56416667 Common - hypothetical protein AM436 239 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 56416831 Common ftsJ cell division protein AM669 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 56416709 Common dhkA sensory box histidine kinase/response regulator AM498 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56416977 Common - hypothetical protein AM884 138 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 56416875 Common nuoL NADH dehydrogenase chain L AM746 208 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 56417005 Common tuf elongation factor Tu AM914 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 56416526 Common - hypothetical protein AM237 147 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 161544979 Common fbaB fructose-bisphosphate aldolase AM1194 80 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 56417128 Common panC pantoate-beta-alanine ligase AM1089 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 56417047 Common bioB biotin synthase AM969 188 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 56416508 Common ddlB D-alanine--D-alanine ligase AM205 211 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 56417076 Common yajC preprotein translocase subunit AM1012 130 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 56416450 Pathogen msp1bpg2 major surface protein 1B AM124 1 None None None 56416672 Common - hypothetical protein AM445 3 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 56416855 Common lepB signal peptidase AM708 203 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 56416922 Common virB4 VirB4 protein AM814 64 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 56416457 Common cdsA phosphatidate cytidylyltransferase AM132 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 161544989 Common rplU 50S ribosomal protein L21 AM597 149 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 56416676 Common ccmE cytochrome c-type biogenesis protein CcmE AM449 93 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 56417195 Common gltA citrate synthase AM1187 194 COG0372 GltA, Citrate synthase Energy production and conversion 56416703 Pathogen - hypothetical protein AM489 1 None None None 56416702 Common dnaG DNA primase AM488 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 161544987 Common rpsB 30S ribosomal protein S2 AM792 217 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 56416746 Pathogen - hypothetical protein AM550 1 None None None 56416735 Pathogen msp1a major surface protein 1a AM530 1 None None None 56416466 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase AM145 209 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 56417148 Common ftsA cell division protein FTSA AM1115 177 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 56416519 Common pstC ABC-type phosphate transport system, permease component AM223 225 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 56416889 Common prfA peptide chain release factor 1 AM767 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 56417165 Common - hypothetical protein AM1138 40 COG1396 HipB, Predicted transcriptional regulators Transcription 56416776 Pathogen - hypothetical protein AM589 1 None None None 56417181 Common - hypothetical protein AM1168 70 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 56416715 Common acpS holo-(acyl-carrier-protein) synthase AM506 151 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 56417016 Common hflK HFLK protein AM925 101 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 56416514 Common - hypothetical protein AM217 3 None None None 56416574 Common rpsD 30S ribosomal protein S4 AM301 217 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 56416382 Common grpE GRPE protein AM013 230 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 56416551 Common - hypothetical protein AM268 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 56416932 Common rpmB 50S ribosomal protein L28 AM826 88 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 56416531 Common murD UDP-N-acetylmuramoylalanine--D-glutamate ligase AM243 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 56417082 Common ppa inorganic phosphatase protein AM1020 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 56417263 Pathogen - hypothetical protein AM1285 2 None None None 56416986 Common rpsE 30S ribosomal protein S5 AM894 242 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 56416374 Common rodA rod shape determining protein AM005 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 56416426 Common thiF thiamine biosynthesis protein AM088 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 56416659 Common mcd malonyl-CoA decarboxylase AM425 29 None None None 56416880 Common - hypothetical protein AM753 4 None None None 56416626 Pathogen - hypothetical protein AM380 1 None None None 56416982 Common rpsM 30S ribosomal protein S13 AM890 215 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 56417103 Common - hypothetical protein AM1056 3 COG4907 COG4907, Predicted membrane protein Function unknown 56417119 Common - hypothetical protein AM1079 169 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 56416760 Common infB translation initiation factor IF-2 AM568 216 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 56416738 Pathogen mlp4 major surface protein 1a-like protein 4 AM536 1 None None None 56417132 Common - hypothetical protein AM1094 210 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 56416407 Common rplT 50S ribosomal protein L20 AM054 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 56417213 Common rpe ribulose-phosphate 3-epimerase AM1213 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 56416581 Common clpX ATP-dependent protease ATP-binding subunit AM310 222 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 56416479 Common rpsF 30S ribosomal protein S6 AM161 116 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 56416396 Common - hypothetical protein AM035 11 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 56416417 Common - hypothetical protein AM071 3 None None None 56417140 Common surf1 surfeit locus protein 1 AM1105 36 COG3346 COG3346, Uncharacterized conserved protein Function unknown 56416720 Common tdpX1 thioredoxin peroxidase 1 AM511 221 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56417166 Common omp1 outer membrane protein 1 AM1139 3 None None None 56417282 Common fdxA ferredoxin II AM1309 178 COG1146 COG1146, Ferredoxin Energy production and conversion 56416952 Common - hypothetical protein AM854 145 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56417265 Common ftsW cell division protein AM1287 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 56417280 Common - hypothetical protein AM1306 122 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56416614 Pathogen - hypothetical protein AM357 1 None None None 56416917 Common - hypothetical protein AM809 28 COG5448 COG5448, Uncharacterized conserved protein Function unknown 56417293 Common dapF diaminopimelate epimerase AM1323 200 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 56416896 Common - hypothetical protein AM779 4 None None None 56416975 Pathogen - hypothetical protein AM881 2 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 56416649 Common mutS DNA mismatch repair protein AM412 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 56417247 Common ftsZ cell division protein FtsZ AM1261 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 56416790 Common - hypothetical protein AM612 33 None None None 56416666 Common - hypothetical protein AM435 169 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 56417049 Pathogen - hypothetical protein AM974 1 None None None 56416532 Common tolB translocation protein TolB AM244 159 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 56416843 Common - hypothetical protein AM685 215 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56416431 Common trxA thioredoxin AM096 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 56416629 Common uvrC excinuclease ABC subunit C AM385 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 56416794 Common trxB2 thioredoxin reductase AM617 240 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 56417153 Pathogen - hypothetical protein AM1121 1 None None None 56416848 Common - hypothetical protein AM694 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 56416821 Common - hypothetical protein AM656 236 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 56416909 Common lpdA dihydrolipoamide dehydrogenase AM797 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 56417147 Common - hypothetical protein AM1114 3 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 56416929 Pathogen - hypothetical protein AM823 2 None None None 56416693 Common pleD response regulator PleD AM475 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 56416438 Common fabD malonyl CoA-acyl carrier protein transacylase AM110 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 56417062 Common orfY ORF Y AM990 3 None None None 56416591 Common argD acetylornithine aminotransferase AM326 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 56416959 Common thiO thiamine biosynthesis oxidoreductase AM863 58 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 56417173 Common - hypothetical protein AM1146 92 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 56416545 Common rplL 50S ribosomal protein L7/L12 AM261 60 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 56416754 Common - hypothetical protein AM560 76 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 56417029 Common radC DNA repair protein AM942 177 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 56417040 Pathogen - hypothetical protein AM959 1 None None None 56417055 Common - hypothetical protein AM981 4 None None None 56416631 Common birA biotin-(acetyl-CoA carboxylase) AM389 230 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 56417100 Common virB4 VirB4 protein AM1053 56 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 56417023 Pathogen - hypothetical protein AM936 1 None None None 56416773 Common putA bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase AM583 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 56416371 Pathogen - hypothetical protein AM1359 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 56417237 Pathogen - hypothetical protein AM1242 1 None None None 56416499 Common cycM cytochrome C AM190 56 COG3474 COG3474, Cytochrome c2 Energy production and conversion 56416782 Pathogen - hypothetical protein AM595 1 None None None 56417124 Common hemK protein-(glutamine-N5) methyltransferase AM1084 215 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 161544980 Common secA translocase AM1120 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 56416836 Pathogen - hypothetical protein AM676 1 None None None 56417036 Common - hypothetical protein AM953 34 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 56417081 Common - hypothetical protein AM1018 22 COG2932 COG2932, Predicted transcriptional regulator Transcription 56416630 Pathogen - hypothetical protein AM387 2 None None None 56416854 Common nuoI NADH dehydrogenase subunit I AM707 193 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 56416673 Common leuS leucyl-tRNA synthetase AM446 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56417004 Common rpsJ 30S ribosomal protein S10 AM913 216 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 56417063 Common rho transcription termination factor Rho AM992 217 COG1158 Rho, Transcription termination factor Transcription 56416613 Pathogen - hypothetical protein AM356 1 None None None 56417180 Pathogen omp5 outer membrane protein 5 AM1166 2 None None None 161544988 Common serS seryl-tRNA synthetase AM759 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 56417117 Pathogen - hypothetical protein AM1077 1 None None None 56417118 Pathogen - hypothetical protein AM1078 1 None None None 56417129 Common - hypothetical protein AM1091 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 56417154 Common - hypothetical protein AM1122 3 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 56416677 Common surE stationary-phase survival protein AM451 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 56416976 Common - hypothetical protein AM882 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 56416704 Common rpoD RNA polymerase sigma factor AM490 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 56416963 Common fabH 3-oxoacyl-[acyl-carrier-protein] synthase III AM869 210 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 56416492 Common gmk guanylate kinase AM177 213 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 56416590 Pathogen - hypothetical protein AM324 2 None None None 56416729 Common truB tRNA pseudouridine 55 synthase AM524 244 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 56417242 Common orfX ORF X AM1253 3 None None None 56416444 Common mpp mitochondrial processing protease AM117 196 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 56416507 Common gshB glutathione synthetase AM203 128 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 56416820 Common iscS cysteine desulfurase AM655 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 56416655 Common pbpA2 penicillin-binding protein AM418 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 56416987 Common rplR 50S ribosomal protein L18 AM895 174 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 56417015 Common - hypothetical protein AM924 4 None None None 56416923 Common virB3 VirB3 protein AM815 12 COG3702 VirB3, Type IV secretory pathway, VirB3 components Intracellular trafficking and secretion 56416550 Common - hypothetical protein AM266 6 COG1238 COG1238, Predicted membrane protein Function unknown 56416500 Common nuoL2 NADH dehydrogenase I chain L AM193 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 56417139 Common slt soluble lytic murein transglycosylase precursor AM1104 162 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56416421 Common omp14 outer membrane protein 14 AM075 3 None None None 56417203 Common secF preprotein translocase subunit SecF AM1197 205 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 56416765 Common - hypothetical protein AM573 30 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 56416865 Common rbfA ribosome-binding factor A AM734 81 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 56416983 Common adk adenylate kinase AM891 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 56417080 Common czcR transcriptional activator protein AM1016 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56417198 Pathogen - hypothetical protein AM1191 2 None None None 56416787 Pathogen - hypothetical protein AM603 1 None None None 56416801 Common - hypothetical protein AM626 194 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 56416888 Common - GTPase EngB AM764 176 COG0218 COG0218, Predicted GTPase General function prediction only 56417007 Common cmk cytidylate kinase AM916 197 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 56416560 Pathogen - hypothetical protein AM283 1 None None None 56417208 Common mraY1 phospho-n-acetylmuramoyl-pentapeptide-transferase AM1207 211 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 56417226 Common mviN virulence factor MVIN AM1229 180 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 56417194 Common - hypothetical protein AM1186 27 None None None 56417046 Pathogen - hypothetical protein AM968 1 None None None 56417230 Common plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase AM1235 97 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 56416573 Common - hypothetical protein AM299 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 56417096 Pathogen - hypothetical protein AM1046 2 None None None 56416943 Common dnaK DNAK protein AM842 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56416900 Common petA cytochrome B6-F complex iron-sulfur subunit AM784 120 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 56416456 Common uppS putative undecaprenyl diphosphate synthase AM131 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 56416891 Common fpg formamidopyrimidine-DNA glycosylase AM771 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 56416874 Common nuoM NADH dehydrogenase chain M AM745 209 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 56416916 Common murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase AM807 211 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 56416716 Common proS prolyl-tRNA synthetase AM507 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416641 Common - hypothetical protein AM401 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 56416933 Common priA primosomal protein N' AM827 211 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 56416410 Common glmU UDP-N-acetylglucosamine pyrophosphorylase AM058 232 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 56416795 Common pmbA pmbA protein AM618 159 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 56417159 Common ftsY cell division protein AM1129 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 56416517 Common - hypothetical protein AM220 79 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 56417167 Pathogen opag3 msp2 operon associated gene 3 AM1140 2 None None None 56416384 Common pyrG CTP synthetase AM018 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 56416781 Pathogen - hypothetical protein AM594 1 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 56416832 Pathogen - hypothetical protein AM670 1 None None None 56416578 Pathogen - hypothetical protein AM306 1 None None None 56416496 Pathogen - hypothetical protein AM185 1 COG5183 SSM4, Protein involved in mRNA turnover and stability RNA processing and modification 56417123 Common grxC1 glutaredoxin 3 AM1083 141 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 56416391 Common - putative monovalent cation/H+ antiporter subunit D AM026 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 56416743 Pathogen - hypothetical protein AM545 1 None None None 56417146 Common - hypothetical protein AM1113 14 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 56417010 Pathogen - hypothetical protein AM919 2 None None None 56417048 Common purL phosphoribosylformylglycinamidine synthase AM973 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 56416766 Common - hypothetical protein AM574 19 COG5362 COG5362, Phage-related terminase General function prediction only 56416775 Common - hypothetical protein AM586 86 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 56416965 Common rpmF 50S ribosomal protein L32 AM870.5 131 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 56417221 Pathogen omp9 outer membrane protein 9 AM1222 2 None None None 56416942 Common - hypothetical protein AM841 100 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 56416424 Common recA recombinase A AM085 225 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 56416791 Pathogen - hypothetical protein AM613 1 None None None 56417286 Common virB11 VirB11 protein AM1313 155 COG0630 VirB11, Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis Cell motility and secretion / Intracellular trafficking and secretion 56417308 Common - hypothetical protein AM1346 168 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 56416731 Common pnp polynucleotide phosphorylase/polyadenylase AM526 233 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 56416927 Common lipA lipoyl synthase AM820 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 56416656 Common - hypothetical protein AM419 36 COG2887 COG2887, RecB family exonuclease DNA replication, recombination, and repair 56416603 Common rpmG 50S ribosomal protein L33 AM340 122 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 56416958 Common - hypothetical protein AM862 4 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 56417101 Common - hypothetical protein AM1054 3 None None None 56417294 Pathogen - hypothetical protein AM1324 1 None None None 56417068 Common metS methionyl-tRNA synthetase AM1001 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56417276 Common hemE uroporphyrinogen decarboxylase AM1301 178 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 56417079 Common rnd ribonuclease D AM1015 100 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 56416991 Common rplE 50S ribosomal protein L5 AM899 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 56416680 Common nuoA NADH dehydrogenase I chain A AM454 160 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 56416895 Common - hypothetical protein AM778 4 None None None 56417255 Common thrS threonyl-tRNA synthetase AM1273 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416951 Common - hypothetical protein AM853 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 56416829 Common atpD F0F1 ATP synthase subunit beta AM666 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 56416439 Common tmk thymidylate kinase AM111 226 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 56417316 Pathogen - hypothetical protein AM1354 1 None None None 56417083 Pathogen - hypothetical protein AM1021 1 None None None 56417197 Pathogen - hypothetical protein AM1189 1 None None None 56416582 Common lon ATP-dependent protease LA AM311 226 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 56416397 Common thiG thiazole synthase AM037 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 56416808 Pathogen - hypothetical protein AM638 3 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 56416414 Common orfX ORF X AM065 3 None None None 56417131 Common - hypothetical protein AM1093 36 COG2938 COG2938, Uncharacterized conserved protein Function unknown 56417172 Common - hypothetical protein AM1145 4 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56416480 Common rpsR 30S ribosomal protein S18 AM161.5 211 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 56416415 Common fpbA iron binding protein FbpA precursor AM069 112 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 56416753 Common tpiA triosephosphate isomerase AM559 217 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 56417006 Common - hypothetical protein AM915 214 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 56416778 Common xthA2 exodeoxyribonuclease III AM591 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 56416949 Pathogen - putative monovalent cation/H+ antiporter subunit F AM851 3 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 56416490 Common ruvA holliday junction DNA helicase AM173 206 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 56416915 Common dut deoxyuridine 5'triphosphate nucleotidohydrolase AM805 183 COG0756 Dut, dUTPase Nucleotide transport and metabolism 56416662 Common dnaA chromosomal replication initiation protein AM430 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 56417097 Pathogen - hypothetical protein AM1048 2 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 56417270 Common glyS glycyl-tRNA synthetase beta chain AM1295 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 56416640 Common - hypothetical protein AM400 3 None None None 56417084 Common rpsI 30S ribosomal protein S9 AM1022 222 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 56416638 Common znuC zinc uptake system ATP-binding protein AM397 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 56416838 Common recO DNA repair protein RecO AM680 36 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 56416816 Common adx1 ferredoxin [2Fe-2S] adrenodoxin-like precursor adx1 AM650 99 COG0633 Fdx, Ferredoxin Energy production and conversion 56417138 Common - hypothetical protein AM1103 14 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 56416930 Common pycA propionyl-CoA carboxylase alpha chain precursor AM824 234 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 56416520 Common alaS alanyl-tRNA synthetase AM224 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416903 Pathogen - hypothetical protein AM790 2 COG3737 COG3737, Uncharacterized conserved protein Function unknown 56416469 Common cspA cold shock protein AM149 105 COG1278 CspC, Cold shock proteins Transcription 56417277 Common - hypothetical protein AM1303 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 56417187 Common atpA F0F1 ATP synthase subunit alpha AM1174 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 56416618 Pathogen - hypothetical protein AM368 1 None None None 56417209 Common ispB octaprenyl-diphosphate synthase AM1208 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 56417309 Common dapE succinyl-diaminopimelate desuccinylase AM1347 211 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 56416624 Common htpG heat shock protein 90 AM376 149 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 56417199 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 AM1192 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 56416608 Pathogen - hypothetical protein AM347 1 None None None 56417069 Common lysC aspartokinase AM1005 228 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 56417254 Common cinA competence / damage-inducible protein AM1272 193 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 56416471 Common rnd ribonuclease D AM151 120 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 56417094 Pathogen - hypothetical protein AM1037 2 None None None 56417078 Common dnaN DNA polymerase III beta chain AM1014 214 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 56417239 Common secD preprotein translocase subunit SecD AM1245 219 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 56416725 Common - hypothetical protein AM518 22 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 56416445 Common - hypothetical protein AM118 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 56416506 Common - hypothetical protein AM202 70 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 56416678 Common nuoC1 NADH-ubiquinone oxidoreductase subunit AM452 169 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 56417001 Pathogen rplW 50S ribosomal protein L23 AM910 3 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 56416594 Common tolR TolR protein AM329 89 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 56416700 Common - hypothetical protein AM486 6 None None None 56417037 Pathogen - hypothetical protein AM955 1 None None None 56417241 Pathogen orfY ORF Y AM1251 2 None None None 56416883 Common - hypothetical protein AM758 127 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 56417228 Pathogen - hypothetical protein AM1232 1 None None None 56416877 Common nuoJ NADH dehydrogenase chain J AM748 61 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 56416728 Common mreB rod shape-determining protein AM522 233 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 161544985 Common rpsK 30S ribosomal protein S11 AM888 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 56416660 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B AM426 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 56416707 Pathogen - hypothetical protein AM495 1 None None None 56416857 Common - hypothetical protein AM712 7 None None None 56416919 Common - hypothetical protein AM811 20 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 56417116 Pathogen ana29 ana29 AM1076 1 None None None 56416549 Pathogen - hypothetical protein AM265 1 None None None 56416864 Common terC membrane protein AM733 106 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 56416846 Pathogen - hypothetical protein AM689 1 None None None 56417060 Pathogen omp15 outer membrane protein 15 AM987 1 None None None 56416841 Pathogen - hypothetical protein AM683 1 None None None 56417071 Common coxB cytochrome c oxidase subunit II AM1007 156 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 56416539 Common tuf elongation factor Tu AM254 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 56416593 Common - hypothetical protein AM328 13 None None None 56416695 Common - hypothetical protein AM477 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 56417307 Pathogen - hypothetical protein AM1341 1 None None None 56416636 Pathogen - hypothetical protein AM395 1 None None None 56416427 Common msp4 major surface protein 4 AM090 3 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 56417207 Common glnA glutamine synthetase AM1206 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 56416789 Common ygfA 5-formyltetrahydrofolate cyclo-ligase AM606 160 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 56416817 Common hscA heat shock protein AM651 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56417027 Common glmM phosphoglucosamine mutase AM940 240 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 56416529 Common aprE alkaline protease secretion protein AM241 114 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56417106 Pathogen orfY ORF Y AM1059 2 None None None 56416833 Pathogen - hypothetical protein AM671 1 None None None 56416708 Common cutA periplasmic divalent cation tolerance protein AM497 104 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 56416803 Pathogen - hypothetical protein AM629 1 None None None 56416497 Pathogen msp1Bpg1 major surface protein 1B AM188 1 None None None 56417020 Common - hypothetical protein AM929 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 56416763 Common ubiG 3-demethylubiquinone-9 3-methyltransferase AM571 127 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56417000 Common rplB 50S ribosomal protein L2 AM909 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 56416681 Common uvrA excinuclease ABC subunit A AM456 240 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 56417009 Common sppA protease IV AM918 168 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56417122 Common ribF riboflavin kinase / FAD synthetase protein AM1082 211 COG0196 RibF, FAD synthase Coenzyme metabolism 56417057 Common purM phosphoribosylaminoimidazole synthetase AM983 231 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 56417050 Common - hypothetical protein AM975 190 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 56416392 Pathogen - hypothetical protein AM027 1 None None None 56417232 Common - hypothetical protein AM1237 154 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 56416999 Common rpsS 30S ribosomal protein S19 AM908 224 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 56416566 Common sdhC succinate dehydrogenase cytochrome b556 subunit AM290 29 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 56416577 Common pgpA phosphatidylglycerophosphatase A AM305 99 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 56416572 Common perM permease perM-like AM297 186 COG0628 PerM, Predicted permease General function prediction only 56416988 Common rplF 50S ribosomal protein L6 AM896 224 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 56416559 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase AM282 208 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 56417196 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein AM1188 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 56417215 Pathogen - hypothetical protein AM1216 1 None None None 56416544 Common rplJ 50S ribosomal protein L10 AM260 125 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 56417130 Common dsbD C-type cytochrome biogenesis protein AM1092 115 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56417310 Common kefB glutathione-regulated potassium-efflux system protein AM1348 186 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 56416481 Common rplI 50S ribosomal protein L9 AM162 215 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 56416609 Pathogen - hypothetical protein AM348 1 None None None 56416398 Pathogen - hypothetical protein AM038 2 None None None 56416552 Common - hypothetical protein AM270 7 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 56417266 Common metK S-adenosylmethionine synthetase AM1288 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 56416990 Common rpsN small ribosomal protein S14 AM898 202 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 56416442 Common secB preprotein translocase subunit SecB AM114 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 56416459 Pathogen - hypothetical protein AM136 2 None None None 56416894 Pathogen - hypothetical protein AM776 1 None None None 56417317 Common - translation-associated GTPase AM1355 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 56417285 Common virD4 VirD4 protein AM1312 73 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 56416950 Common tktA transketolase AM852 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 56416461 Common hisS histidyl-tRNA synthetase AM138 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416612 Pathogen - hypothetical protein AM354 1 None None None 56417160 Common icd isocitrate dehydrogenase AM1131 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 56416468 Common - hypothetical protein AM148 88 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56416957 Common ispA geranyltranstransferase (farnesyl-diphosphate synthase) AM861 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 56417249 Common parA chromosome partitioning protein AM1266 227 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56416814 Common - hypothetical protein AM647 28 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 56416783 Common rpmA 50S ribosomal protein L27 AM596 214 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 56416920 Common - hypothetical protein AM812 13 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 56416404 Common rho transcription termination factor Rho AM051 217 COG1158 Rho, Transcription termination factor Transcription 56416792 Pathogen - hypothetical protein AM615 1 None None None 56416744 Pathogen - hypothetical protein AM546 1 None None None 56417256 Common infC translation initiation factor IF-3 AM1274 210 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 56416530 Common - hypothetical protein AM242 24 COG5590 COG5590, Uncharacterized conserved protein Function unknown 56417295 Common - hypothetical protein AM1325 3 None None None 56416587 Common - hypothetical protein AM320 219 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 56417227 Common lgt prolipoprotein diacylglyceryl transferase AM1231 207 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 56416902 Common znuB zinc ABC transporter, permease protein AM789 177 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 56417243 Common - hypothetical protein AM1254 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 56416458 Pathogen msp1Bpg3 major surface protein 1B AM133 1 None None None 56416381 Common trpS tryptophanyl-tRNA synthetase AM012 217 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56416931 Common sfhB sfhb-like protein AM825 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 56416839 Pathogen - hypothetical protein AM681 1 None None None 56416639 Common ubiB ubiquinone biosynthesis protein AM399 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 56416470 Common ntrY nitrogen regulation protein AM150 220 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 56416989 Common rpsH 30S ribosomal protein S8 AM897 240 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 56416882 Common - hypothetical protein AM757 6 COG3736 VirB8, Type IV secretory pathway, component VirB8 Intracellular trafficking and secretion 56416405 Common - hypothetical protein AM052 41 COG3820 COG3820, Uncharacterized protein conserved in bacteria Function unknown 56417220 Pathogen omp8 outer membrane protein 8 AM1221 2 None None None 56416921 Common virB6 VirB6 protein AM813 8 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 56416941 Common nuoL3 putative monovalent cation/H+ antiporter subunit D AM840 173 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 56417278 Common - hypothetical protein AM1304 45 COG3740 COG3740, Phage head maturation protease General function prediction only 56416625 Pathogen - hypothetical protein AM378 1 None None None 56416491 Common ccmc heme exporter protein C AM175 111 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 56417205 Common hemA 5-aminolevulinate synthase AM1202 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 56417216 Common argF ornithine carbamoyltransferase AM1217 222 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 56417017 Common - hypothetical protein AM926 13 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 56416948 Common - putative monovalent cation/H+ antiporter subunit G AM849 28 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 56416511 Common orfX ORF X AM210 3 None None None 56416770 Common - hypothetical protein AM580 3 None None None 56417031 Common groEL chaperonin GroEL AM944 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 56416661 Common fabI enoyl-[acyl-carrier-protein] reductase AM428 228 COG0623 FabI, Enoyl- acyl-carrier-protein 56417271 Common dnaJ DNAJ protein AM1296 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56416918 Common - hypothetical protein AM810 6 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 56416876 Common nuoK NADH dehydrogenase chain K AM747 83 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 56416736 Pathogen mlp2 major surface protein 1a-like protein 22 AM532 1 None None None 56416727 Common mreC rod shape determining protein AM521 123 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 56416701 Common - hypothetical protein AM487 95 COG1565 COG1565, Uncharacterized conserved protein Function unknown 56416648 Pathogen - hypothetical protein AM410 2 None None None 161544986 Common carA carbamoyl phosphate synthase small subunit AM803 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 56416734 Pathogen - hypothetical protein AM529 1 None None None 56416974 Common rpmH 50S ribosomal protein L34 AM880.5 187 None None None 56416856 Common - hypothetical protein AM709 141 COG0316 IscA, Uncharacterized conserved protein Function unknown 56416881 Common miaA tRNA isopentenylpyrophosphate transferase AM755 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 56417070 Pathogen - hypothetical protein AM1006 1 None None None 56416619 Common uvrD DNA helicase II AM369 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 56417095 Pathogen - hypothetical protein AM1041 1 None None None 56416518 Common glnA glutamine synthetase AM222 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 56416509 Common ftsQ cell division protein AM206 31 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 56417171 Common msp2 major surface protein 2 AM1144 3 None None None 56416505 Common aspS asparaginyl-tRNA synthetase AM200 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56417305 Common pth peptidyl-tRNA hydrolase AM1339 215 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 56417288 Common virB9 VirB9 protein AM1315 37 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 56416964 Common plsX fatty acid/phospholipid synthesis protein AM870 176 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 56416722 Common aatA aspartate aminotransferase A AM515 213 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56417109 Common hflK hflK protein AM1064 157 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 56416657 Common - hypothetical protein AM420 120 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56417137 Common pgsA CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase AM1100 202 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 56417244 Pathogen omp11 outer membrane protein 11 AM1255 2 None None None 56416373 Pathogen - hypothetical protein AM002 2 None None None 56416805 Common rpoH RNA polymerase sigma-32 factor AM631 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 56416694 Pathogen - hypothetical protein AM476 3 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 56416713 Common topA DNA topoisomerase AM502 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 56416668 Common coaE dephospho-CoA kinase AM438 183 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism