Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete sequence NC_003296 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 17549615 Common RSp1396 PUTATIVE TRANSPORTER TRANSMEMBRANE PROTEIN RS02062 188 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17549410 Common gntP PROBABLE HIGH-AFFINITY GLUCONATE TRANSPORTER (GNT-III SYSTEM) TRANSMEMBRANE PROTEIN RSp1189 84 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 17548455 Common RSp0234 PROBABLE METABOLITE TRANSPORT TRANSMEMBRANE PROTEIN RS05189 139 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549076 Pathogen hrpY HRP PILUS SUBUNIT HRPY PROTEIN RSp0855 1 None None None 17548710 Common czcR PROBABLE RESPONSE REGULATOR FOR COBALT ZINC CADMIUM RESISTANCE TRANSCRIPTION REGULATOR PROTEIN RSp0489 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549155 Common RSp0934 PROBABLE AMINO ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS05399 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 17549583 Common kgd alpha-ketoglutarate decarboxylase RSp1364 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 17549319 Common RSp1098 PUTATIVE HNS-LIKE TRANSCRIPTION REGULATOR PROTEIN RS02604 24 COG2916 Hns, DNA-binding protein H-NS General function prediction only 17549632 Common flhD transcriptional activator FlhD RSp1413 27 None None None 17548489 Pathogen RSp0268 hypothetical protein RS03698 1 None None None 17549146 Common RSp0925 hypothetical protein RS05408 2 None None None 17549515 Common RSp1296 PUTATIVE TRANSMEMBRANE PROTEIN RS05341 36 COG4260 COG4260, Putative virion core protein (lumpy skin disease virus) Function unknown 17549418 Common RSp1197 PUTATIVE RESISTANCE TRANSMEMBRANE PROTEIN RS03141 156 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17549609 Common fliA flagellar biosynthesis sigma factor RSp1390 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 17549560 Common RSp1341 hypothetical protein RS04766 24 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 17548268 Common soxD1 PROBABLE SARCOSINE OXIDASE (DELTA SUBUNIT) OXIDOREDUCTASE PROTEIN RSp0047 37 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 17549059 Pathogen RSp0838 hypothetical protein RS05357 1 None None None 17548660 Pathogen RSp0439 hypothetical protein RS00898 1 None None None 17548503 Common RSp0282 PROBABLE AMINO-ACID PERMEASE TRANSMEMBRANE PROTEIN RS03682 187 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 17549083 Pathogen hpaP HRP ASSOCIATED PROTEIN HPAP RSp0862 4 None None None 17549379 Common RSp1158 hypothetical protein RS05427 24 COG3813 COG3813, Uncharacterized protein conserved in bacteria Function unknown 17549458 Common RSp1237 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03181 124 COG0583 LysR, Transcriptional regulator Transcription 17548566 Common flgE flagellar hook protein FlgE RSp0345 128 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 17548729 Common nfrB bacteriophage N4 adsorption protein B RSp0508 17 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 17548695 Common RSp0474 PUTATIVE GENERAL SECRETION PATHWAY GSPD-RELATED PROTEIN RS00431 142 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 17549789 Pathogen RSp1570 hypothetical protein RS02126 1 None None None 17548514 Pathogen RSp0293 PROBABLE TRANSMEMBRANE PROTEIN RS03673 1 None None None 17549048 Common RSp0827 PROBABLE KETOGLUTARATE SEMIALDEHYDE DEHYDROGENASE PROTEIN RS05368 160 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17549066 Pathogen RSp0845 hypothetical protein RS05351 1 None None None 17548667 Common RSp0446 PROBABLE OXIDOREDUCTASE PROTEIN RS00905 37 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17548755 Common icc PUTATIVE ICC PROTEIN HOMOLOG RSp0534 80 COG1409 Icc, Predicted phosphohydrolases General function prediction only 17549719 Common RSp1500 PROBABLE SIGNAL PEPTIDE PROTEIN RS03041 12 COG5430 COG5430, Uncharacterized secreted protein Function unknown 17549502 Common RSp1283 PROBABLE PORIN TRANSMEMBRANE PROTEIN RS05328 26 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 17549370 Common tISRso13 IS13-TRANSPOSASE PROTEIN RSp1149 4 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 17549736 Common RSp1517 hypothetical protein RS04794 50 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 17549639 Pathogen RSp1420 hypothetical protein RS06015 1 None None None 17548919 Common RSp0698 PUTATIVE AMINOTRANSFERASE PROTEIN RS01751 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 17548626 Common RSp0405 hypothetical protein RS00862 2 None None None 17548407 Common RSp0186 HYPOTHETICAL PERIPLASMIC SUBSTRATE BINDING ABC TRANSPORTER PROTEIN RS04698 43 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 17548705 Common RSp0484 hypothetical protein RS00362 15 COG4874 COG4874, Uncharacterized protein conserved in bacteria containing a pentein-type domain Function unknown 17548842 Common cbiL PROBABLE PRECORRIN-2 C20-METHYLTRANSFERASE PROTEIN RSp0621 108 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 17549770 Common RSp1551 hypothetical protein RS02107 1 None None None 17549778 Common zwf glucose-6-phosphate 1-dehydrogenase RSp1559 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 17549308 Common RSp1087 PROBABLE OUTER MEMBRANE CHANNEL SIGNAL PEPTIDE PROTEIN RS02594 141 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 17548720 Pathogen RSp0499 PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN RS00378 3 None None None 17549763 Common RSp1544 hypothetical protein RS02100 3 None None None 17549259 Pathogen RSp1038 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS02375 1 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 17548330 Common RSp0109 hypothetical protein RS03013 171 COG0714 COG0714, MoxR-like ATPases General function prediction only 17548280 Common RSp0059 PROBABLE TRANSMEMBRANE PROTEIN RS02034 84 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 17549575 Pathogen RSp1356 PROBABLE TRANSMEMBRANE PROTEIN RS04820 1 None None None 17548478 Common RSp0257 hypothetical protein RS03709 61 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 17548405 Pathogen RSp0184 hypothetical protein RS04696 1 None None None 17549481 Common RSp1262 hypothetical protein RS05307 1 None None None 17549723 Common RSp1504 hypothetical protein RS03037 22 COG4309 COG4309, Uncharacterized conserved protein Function unknown 17549401 Common RSp1180 PUTATIVE HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN RS05070 161 None None None 17549810 Common RSp1591 PUTATIVE TRANSMEMBRANE ALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS02148 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17548297 Common RSp0076 hypothetical protein RS05545 39 COG3636 COG3636, Predicted transcriptional regulator Transcription 17549307 Common cpaE2 PROBABLE PILUS ASSEMBLY PROTEIN RSp1086 78 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 17549580 Pathogen RSp1361 hypothetical protein RS04826 1 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 17548766 Pathogen RSp0545 hypothetical protein RS05798 2 None None None 17548981 Pathogen RSp0760 PROBABLE TRANSMEMBRANE PROTEIN RS01948 1 None None None 17548230 Common dctD1 PROBABLE RESPONSE REGULATOR OF THE C4-DICARBOXYLATE TRANSPORT TWO-COMPONENT REGULATORY SYSTEM TRANSCRIPTION REGULATOR PROTEIN RSp0009 211 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 17549757 Pathogen RSp1538 PUTATIVE LIPOPROTEIN RS06035 1 None None None 17549285 Pathogen RSp1064 PROBABLE TRANSMEMBRANE PROTEIN RS02472 2 None None None 17549406 Common dsd PROBABLE D-SERINE DEAMINASE (D-SERINE DEHYDRATASE) PROTEIN RSp1185 48 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 17548289 Common RSp0068 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02043 148 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 17548386 Common RSp0165 hypothetical protein RS05513 34 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 17549358 Common RSp1137 PUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN RS05482 69 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548390 Pathogen RSp0169 PUTATIVE TRANSMEMBRANE PROTEIN RS04681 1 None None None 17549894 Common tISRso5 ISRSO5-TRANSPOSASE PROTEIN RSp1675 43 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548679 Common RSp0458 PROBABLE RHS-RELATED PROTEIN RS00945 64 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548329 Common RSp0108 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS03014 45 COG1309 AcrR, Transcriptional regulator Transcription 17549281 Common RSp1060 PUTATIVE TRANSMEMBRANE PROTEIN RS02397 44 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 17548904 Common RSp0683 hypothetical protein RS01766 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 17549298 Pathogen RSp1077 PROBABLE TRANSMEMBRANE PROTEIN RS02582 1 None None None 17549050 Common gudD2 PROBABLE GLUCARATE DEHYDRATASE PROTEIN RSp0829 46 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 17549351 Pathogen RSp1130 hypothetical protein RS05488 1 None None None 17548648 Common RSp0427 hypothetical protein RS00884 2 None None None 17548685 Common RSp0464 PROBABLE GSPE-RELATED PROTEIN RS00952 218 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 17549488 Common RSp1269 PROBABLE SIGNAL PEPTIDE PROTEIN RS05314 11 None None None 17549658 Common cysE1 PROBABLE SERINE ACETYLTRANSFERASE PROTEIN RSp1439 210 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 17548245 Common RSp0024 hypothetical protein RS01998 123 COG1881 COG1881, Phospholipid-binding protein General function prediction only 17548862 Common RSp0641 PROBABLE PEPTIDE SYNTHETASE PROTEIN RS05860 242 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 17549239 Common epsB EPS I POLYSACCHARIDE EXPORT TRANSMEMBRANE PROTEIN RSp1018 189 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 17549826 Pathogen RSp1607 hypothetical protein RS02164 2 None None None 17549098 Pathogen popA POPA PROTEIN RSp0877 1 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 17549809 Common RSp1590 hypothetical protein RS02147 61 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 17548276 Common glyA2 serine hydroxymethyltransferase RSp0055 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 17548261 Common RSp0040 hypothetical protein RS02015 2 None None None 17548249 Common RSp0028 PROBABLE GALA PROTEIN RS02003 8 COG5238 RNA1, Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport Signal transduction mechanisms / RNA processing and modification 17549468 Common RSp1247 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03191 69 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 17549839 Common RSp1620 PUTATIVE HEMAGGLUTININ-RELATED PROTEIN RS02177 95 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 17548418 Common RSp0197 chorismate mutase RS04710 10 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 17549703 Common RSp1484 PUTATIVE ESTERASE PROTEIN RS03059 18 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17548828 Common paaD PROBABLE PHENYLACETIC ACID DEGRADATION PROTEIN RSp0607 53 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 17548321 Common RSp0100 PUTATIVE FERRISIDEROPHORE RECEPTOR PROTEIN RS03023 114 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 17548746 Common RSp0525 hypothetical protein RS00404 63 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 17549385 Common RSp1164 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS05643 114 COG1309 AcrR, Transcriptional regulator Transcription 17548240 Common RSp0019 hypothetical protein RS01991 39 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 17548618 Common pat PROBABLE PHOSPHINOTHRICIN ACETYLTRANSFERASE PROTEIN RSp0397 123 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 17549300 Common RSp1079 PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN RS02586 163 COG1221 PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 17548996 Pathogen RSp0775 hypothetical protein RS01933 1 None None None 17549853 Common xylG PROBABLE D-XYLOSE ATP-BINDING ABC TRANSPORTER PROTEIN RSp1634 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 17549390 Common RSp1169 hypothetical protein RS05059 6 COG1409 Icc, Predicted phosphohydrolases General function prediction only 17548523 Common TIS1421B TIS1421-transposase protein B RSp0302 71 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549247 Common RSp1026 PROBABLE SIGNAL PEPTIDE PROTEIN RS02363 17 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 17548623 Common RSp0402 hypothetical protein RS00830 5 None None None 17548798 Common RSp0577 hypothetical protein RS03902 6 None None None 17548974 Common RSp0753 PROBABLE TRANSMEMBRANE PROTEIN RS01955 3 None None None 17548484 Common RSp0263 hypothetical protein RS03702 30 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 17548442 Common RSp0221 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05202 127 COG0583 LysR, Transcriptional regulator Transcription 17548493 Common RSp0272 hypothetical protein RS03692 14 None None None 17549741 Common RSp1522 PROBABLE TRANSMEMBRANE PROTEIN RS04799 74 COG2898 COG2898, Uncharacterized conserved protein Function unknown 17549028 Common RSp0807 PROBABLE FERREDOXIN PROTEIN RS01900 149 COG1146 COG1146, Ferredoxin Energy production and conversion 17548662 Common RSp0441 PROBABLE INNER MEMBRANE MULTIDRUG RESISTANCE TRANSMEMBRANE PROTEIN RS00900 132 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548366 Common RSp0145 PROBABLE TRANSMEMBRANE PROTEIN RS02975 4 None None None 17548344 Common prpR PUTATIVE PROPIONATE CATABOLISM OPERON REGULATORY TRANSCRIPTION REGULATOR PROTEIN RSp0123 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 17548658 Common RSp0437 PROBABLE TRANSPORT TRANSMEMBRANE PROTEIN RS00896 143 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549486 Common RSp1267 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05312 190 COG0583 LysR, Transcriptional regulator Transcription 17549333 Common YS02620 PROBABLE TRANSMEMBRANE MULTIDRUG EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RSp1112 149 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17549555 Pathogen RSp1336 PUTATIVE TRANSPOSASE PROTEIN RS04761 1 None None None 17548235 Common RSp0014 PROBABLE AMINO-ACID TRANSMEMBRANE LIPOPROTEIN ABC TRANSPORTER RS01986 150 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 17548937 Pathogen RSp0716 hypothetical protein RS01733 1 None None None 17548540 Common RSp0319 PROBABLE METAL-TRANSPORTING P-TYPE ATPASE TRANSMEMBRANE PROTEIN RS05448 230 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 17548748 Pathogen RSp0527 PROBABLE TRANSMEMBRANE PROTEIN RS00406 1 None None None 17549864 Common RSp1645 hypothetical protein RS02204 15 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 17548509 Common hmsR N-glycosyltransferase PgaC RSp0288 209 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 17549184 Common nrdD anaerobic ribonucleoside triphosphate reductase RSp0963 116 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 17548397 Pathogen RSp0176 hypothetical protein RS04688 3 None None None 17549101 Common pglA POLYGALACTURONASE PRECURSOR (PECTINASE) SIGNAL PEPTIDE PROTEIN RSp0880 22 COG5434 PGU1, Endopygalactorunase Cell envelope biogenesis, outer membrane 17548879 Common copC PROBABLE COPPER RESISTANCE C SIGNAL PEPTIDE PROTEIN RSp0658 22 COG2372 CopC, Uncharacterized protein, homolog of Cu resistance protein CopC General function prediction only 17549626 Common cheW PROBABLE CHEMOTAXIS PROTEIN CHEW RSp1407 124 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 17548365 Common RSp0144 PROBABLE PROLIN-RICH TRANSMEMBRANE PROTEIN RS02976 6 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 17548309 Pathogen RSp0088 hypothetical protein RS05533 1 None None None 17548332 Common RSp0111 hypothetical protein RS03011 65 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 17548990 Common RSp0769 PUTATIVE TRANSMEMBRANE PROTEIN RS01939 7 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 17549572 Common RSp1353 hypothetical protein RS04783 174 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17549240 Common epsP LOW MOLECULAR WEIGHT PROTEIN-TYROSINE-PHOSPHATASE RSp1019 134 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 17549271 Common fdhD PROBABLE FORMATE DEHYDROGENASE ASSOCIATED PROTEIN (FDHD PROTEIN) RSp1050 135 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 17549509 Common pilW PUTATIVE TYPE 4 FIMBRIAL BIOGENESIS TRANSMEMBRANE PROTEIN RSp1290 7 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 17548532 Common oprM PROBABLE OUTER MEMBRANE CHANEL LIPOPROTEIN RSp0311 126 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17549688 Common RSp1469 PUTATIVE TYROSINE SPECIFIC PROTEIN PHOSPHATASE RS03075 6 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 17548592 Common RSp0371 PUTATIVE 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA TRANSMEMBRANE PROTEIN RS00796 84 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 17548609 Common RSp0388 hypothetical protein RS00816 13 COG3774 OCH1, Mannosyltransferase OCH1 and related enzymes Cell envelope biogenesis, outer membrane 17548727 Common RSp0506 PUTATIVE GLYCIN-RICH TRANSMEMBRANE PROTEIN RS00385 1 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 17549592 Common nosL PROBABLE NOSL LIPOPROTEIN RSp1373 29 COG4314 NosL, Predicted lipoprotein involved in nitrous oxide reduction Energy production and conversion 17549725 Common RSp1506 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03035 104 COG2188 PhnF, Transcriptional regulators Transcription 17548986 Common RSp0765 hypothetical protein RS01943 23 COG4104 COG4104, Uncharacterized conserved protein Function unknown 17549278 Common RSp1057 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02394 199 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 17549650 Common RSp1431 PUTATIVE OXIDOREDUCTASE SIGNAL PEPTIDE PROTEIN RS03111 16 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 17549617 Common aroE shikimate 5-dehydrogenase RSp1398 172 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 17548226 Common RSp0005 hypothetical protein RS01977 1 None None None 17548475 Common RSp0254 PROBABLE TRANSMEMBRANE PROTEIN RS03712 196 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 17549716 Common RSp1497 PROBABLE LIPOPROTEIN SIGNAL PEPTIDE RS03044 24 COG5430 COG5430, Uncharacterized secreted protein Function unknown 17549003 Common RSp0782 PUTATIVE AMINOACYL-TRNA SYNTHETASE PROTEIN RS01925 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 17549824 Pathogen RSp1605 HYPOTHETICAL HEMAGGLUTININ-RELATED PROTEIN RS02162 1 None None None 17548709 Common czcS PROBABLE TRANSMEMBRANE SENSORY TRANSDUCTION HISTIDINE KINASE FOR COBALT ZINC CADMIUM RESISTANCE TRANSCRIPTION REGULATOR PROTEIN RSp0488 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549466 Common RSp1245 PUTATIVE ARYLESTERASE PROTEIN RS03189 13 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 17548683 Pathogen RSp0462 PUTATIVE SIGNAL PEPTIDE PROTEIN RS00950 1 None None None 17548896 Common RSp0675 PROBABLE LIPOPROTEIN RS01774 24 COG4380 COG4380, Uncharacterized protein conserved in bacteria Function unknown 17548458 Common RSp0237 PUTATIVE MALTOOLIGOSYL TREHALOSE TREHALOHYDROLASE PROTEIN RS05186 161 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 17548874 Common RSp0653 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05569 65 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 17548857 Common RSp0636 hypothetical protein RS03731 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 17549442 Common nirD PROBABLE NITRITE REDUCTASE NADPH (SMALL SUBUNIT) OXIDOREDUCTASE PROTEIN RSp1221 46 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 17548943 Common RSp0722 L-aspartate dehydrogenase RS01727 47 COG1712 COG1712, Predicted dinucleotide-utilizing enzyme General function prediction only 17549602 Common ssuA2 PUTATIVE ALKANESULFONATES BINDING PROTEIN PRECURSOR RSp1383 89 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 17548642 Common RSp0421 PROBABLE SIDEROPHORE BIOSYNTHESIS PROTEIN RS00878 49 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 17549141 Common RSp0920 hypothetical protein RS01691 10 COG4688 COG4688, Uncharacterized protein conserved in bacteria Function unknown 17548791 Common RSp0570 hypothetical protein RS06032 32 COG1475 Spo0J, Predicted transcriptional regulators Transcription 17549673 Common RSp1454 PROBABLE TWO-COMPONENT TRANSMEMBRANE SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RS03089 199 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549759 Common RSp1540 hypothetical protein RS02096 2 None None None 17548411 Common RSp0190 PROBABLE TRANSMEMBRANE PROTEIN RS04702 9 COG0730 COG0730, Predicted permeases General function prediction only 17548952 Common RSp0731 PROBABLE TREHALOSE-6-PHOSPHATE SYNTHASE (ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE UDP-FORMING) PROTEIN RS01697 96 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 17549797 Common speB PROBABLE AGMATINASE PROTEIN RSp1578 155 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 17548525 Pathogen RSp0304 PROBABLE AVRPPHD-RELATED PROTEIN RS05468 4 None None None 17549669 Common RSp1450 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03093 163 COG0583 LysR, Transcriptional regulator Transcription 17548610 Common fliE flagellar hook-basal body protein FliE RSp0389 82 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 17548731 Common epsC2 PROBABLE UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE PROTEIN RSp0510 155 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 17549114 Common RSp0893 4-oxalocrotonate tautomerase RS01664 27 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 17549597 Common RSp1378 hypothetical protein RS02080 4 None None None 17548607 Common RSp0386 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS00814 79 COG1846 MarR, Transcriptional regulators Transcription 17549036 Common RSp0815 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01892 131 COG1309 AcrR, Transcriptional regulator Transcription 17548922 Common RSp0701 hypothetical protein RS01748 14 None None None 17549209 Common RSp0988 PROBABLE TRANSMEMBRANE PROTEIN RS02320 21 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 17549563 Common RSp1344 hypothetical protein RS04773 11 None None None 17549522 Common tISRso12 PROBABLE TRANSPOSASE PROTEIN RSp1303 128 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549223 Common tek TEK SIGNAL PEPTIDE PROTEIN RSp1002 2 None None None 17548651 Common RSp0430 PROBABLE ALCOHOL DEHYDROGENASE (ADH-HT) OXIDOREDUCTASE PROTEIN RS00889 208 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 161621738 Common prpB 2-methylisocitrate lyase RSp0122 135 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 17549660 Common RSp1441 PROBABLE TWO-COMPONENT SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RS03102 215 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17548371 Common RSp0150 PROBABLE GENERAL SECRETION PATHWAY GSPG-RELATED TRANSMEMBRANE PROTEIN RS02970 74 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17549257 Common RSp1036 hypothetical protein RS02373 29 None None None 17548763 Pathogen RSp0542 hypothetical protein RS05800 1 None None None 161621737 Common mqo malate:quinone oxidoreductase RSp0814 56 COG0579 COG0579, Predicted dehydrogenase General function prediction only 17548496 Common RSp0275 PROBABLE HYDROLASE TRANSMEMBRANE PROTEIN RS03689 24 COG3979 COG3979, Uncharacterized protein contain chitin-binding domain type 3 General function prediction only 17549739 Common RSp1520 hypothetical protein RS04797 7 COG4278 COG4278, Uncharacterized conserved protein Function unknown 17549749 Common RSp1530 PUTATIVE L-ASCORBATE OXIDASE (ASCORBASE) OXIDOREDUCTASE PROTEIN RS04807 49 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 17549476 Common RSp1257 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05302 152 COG0583 LysR, Transcriptional regulator Transcription 17549169 Common idnD PUTATIVE L-IDONATE 5-DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0948 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 17548785 Common RSp0564 PUTATIVE LIPOPROTEIN RS03914 3 None None None 17549645 Pathogen RSp1426 hypothetical protein RS03116 1 COG4538 COG4538, Uncharacterized conserved protein Function unknown 17549490 Common RSp1271 PUTATIVE FERRISIDEROPHORE RECEPTOR PROTEIN RS05316 106 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 17549844 Common tISRSo16- REMNANT OF ISRSO16-TRANSPOSASE ORFB PROTEIN RSp1625 66 None None None 17548274 Common fdhA PROBABLE GLUTATHIONE-INDEPENDENT FORMALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0053 192 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 17549364 Common glsA glutaminase RSp1143 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 17548834 Common RSp0613 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03754 43 COG1309 AcrR, Transcriptional regulator Transcription 17549630 Common motA flagellar motor protein MotA RSp1411 115 COG1291 MotA, Flagellar motor component Cell motility and secretion 17548447 Common vdh PROBABLE VANILLIN DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0226 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17548270 Common soxG1 PROBABLE SARCOSINE OXIDASE (GAMMA SUBUNIT) OXIDOREDUCTASE PROTEIN RSp0049 29 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 17548378 Common RSp0157 hypothetical protein RS05520 12 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549325 Common otsB PROBABLE TREHALOSE-PHOSPHATASE PROTEIN RSp1104 90 COG1877 OtsB, Trehalose-6-phosphatase Carbohydrate transport and metabolism 17549435 Common RSp1214 hypothetical protein RS03158 20 COG3644 COG3644, Uncharacterized protein conserved in bacteria Function unknown 17548676 Common RSp0455 PROBABLE RHS-RELATED PROTEIN RS00941 48 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548654 Common RSp0433 hypothetical protein RS00892 9 None None None 17548468 Common fur2 PROBABLE FERRIC UPTAKE TRANSCRIPTIONAL (FUR)-RELATED TRANSCRIPTION REGULATOR PROTEIN RSp0247 197 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 17548498 Common treA PROBABLE PERIPLASMIC ALPHA,ALPHA-TREHALASE SIGNAL PEPTIDE PROTEIN RSp0277 26 COG1626 TreA, Neutral trehalase Carbohydrate transport and metabolism 17548753 Common RSp0532 PUTATIVE AMINOPEPTIDASE TRANSMEMBRANE PROTEIN RS00411 155 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 17549016 Common RSp0795 hypothetical protein RS01912 27 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 17549032 Common RSp0811 PROBABLE TONB-DEPENDENT RECEPTOR SIGNAL PEPTIDE PROTEIN RS01896 123 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 17548877 Common copA PROBABLE COPPER RESISTANCE TRANSMEMBRANE PROTEIN RSp0656 126 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 17549552 Common RSp1333 PROBABLE TRANSPOSASE PROTEIN RS05623 128 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548778 Common tISRso16a ISRSO16-TRANSPOSASE ORFA PROTEIN RSp0557 63 None None None 17549710 Common RSp1491 PUTATIVE TRANSFERASE PROTEIN RS03052 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 17549313 Pathogen RSp1092 PUTATIVE PILIN PROTEIN RS02598 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 17549528 Common RSp1309 PROBABLE TRANSMEMBRANE PROTEIN RS05690 27 COG3759 COG3759, Predicted membrane protein Function unknown 17548844 Common RSp0623 PUTATIVE TRANSMEMBRANE PROTEIN RS03744 128 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 17548736 Common RSp0515 hypothetical protein RS00394 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 17549765 Pathogen RSp1546 hypothetical protein RS02102 1 None None None 17548416 Common RSp0195 hypothetical protein RS04708 1 None None None 17549009 Common RSp0788 PUTATIVE TRANSFERASE PROTEIN RS01919 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 17549772 Common RSp1553 PROBABLE TRANSMEMBRANE TWO-COMPONENT SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RS02109 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549000 Common RSp0779 PROBABLE AUTOINDUCER SYNTHASE (ACYL HOMOSERINE LACTONE SYNTHASE) PROTEIN RS01928 25 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 17549302 Common RSp1081 PROBABLE SIGNAL PEPTIDE PROTEIN RS02588 3 None None None 17549621 Common che PROBABLE CHEMOTAXIS RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RSp1402 201 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 17548266 Common sdaA1 PROBABLE L-SERINE DEHYDRATASE (L-SERINE DEAMINASE) PROTEIN RSp0045 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 17548476 Common RSp0255 PROBABLE METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER TRANSMEMBRANE PROTEIN RS03711 141 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548674 Common tISRso5- REMNANT OF ISRSO5 TRANSPOSASE PROTEIN RSp0453 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549373 Common tISRso5 ISRSO5-TRANSPOSASE PROTEIN RSp1152 43 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548394 Common RSp0173 PUTATIVE NIFS-LIKE PROTEIN RS04685 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 17548450 Common RSp0229 PUTATIVE BENZALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS05194 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17548369 Common RSp0148 PUTATIVE GENERAL SECRETION PATHWAY GSPE-RELATED PROTEIN RS02972 221 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 17549163 Common nac nitrogen assimilation transcriptional regulator RSp0942 178 COG0583 LysR, Transcriptional regulator Transcription 17548278 Common RSp0057 hypothetical protein RS02032 11 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 17549081 Common hrcR type III secretion system protein RSp0860 128 COG4790 EscR, Type III secretory pathway, component EscR Intracellular trafficking and secretion 17548855 Common rfaC2 PROBABLE LIPOPOLYSACCHARIDE HEPTOSYLTRANSFERASE PROTEIN RSp0634 54 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 17549517 Common RSp1298 hypothetical protein RS05343 143 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 17548773 Common RSp0552 hypothetical protein RS03927 30 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 17549291 Common RSp1070 PUTATIVE TRANSMEMBRANE PROTEIN RS02559 5 None None None 17548568 Common flgG PROBABLE FLAGELLAR BASAL-BODY ROD PROTEIN FLGG (DISTAL ROD PROTEIN) RSp0347 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 17549085 Common hrcU type III secretion system protein RSp0864 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 17549511 Common RSp1292 PUTATIVE TYPE-4 FIMBRIAL PILIN RELATED SIGNAL PEPTIDE PROTEIN RS05337 42 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 17549878 Common RSp1659 PROBABLE ACYL-CARRIER-PROTEIN RS02218 197 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17549416 Common RSp1195 PROBABLE TWO COMPONENT TRANSMEMBRANE SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RS03139 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17548339 Common RSp0118 hypothetical protein RS03004 1 None None None 17548693 Pathogen RSp0472 PUTATIVE PROLIN-RICH SIGNAL PEPTIDE PROTEIN RS00350 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 17548403 Common RSp0182 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN RS04694 124 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17549849 Common RSp1630 cyanate hydratase RS02188 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 17548501 Pathogen RSp0280 hypothetical protein RS03684 1 None None None 17548815 Pathogen RSp0594 hypothetical protein RS03886 1 None None None 17549424 Common RSp1203 hypothetical protein RS03147 191 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 17548677 Pathogen RSp0456 PROBABLE SIGNAL PEPTIDE PROTEIN RS00942 1 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548323 Common RSp0102 PUTATIVE INSERTION SEQUENCE RS03021 49 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549011 Common RSp0790 PUTATIVE HYDROLASE PROTEIN RS01917 50 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17549436 Common RSp1215 PROBABLE ANKYRIN REPEAT HARBORING PROTEIN RS03159 78 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 17549830 Common gabD2 PROBABLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp1611 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17549210 Common RSp0989 PROBABLE TRANSMEMBRANE PROTEIN RS02321 65 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 17549217 Common ttuC2 PROBABLE TARTRATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0996 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 17549637 Common RSp1418 PROBABLE HYDROLASE PROTEIN RS03123 130 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17548864 Pathogen RSp0643 hypothetical protein RS05579 1 None None None 17548948 Common RSp0727 hypothetical protein RS01701 3 None None None 17549287 Pathogen RSp1066 hypothetical protein RS03027 1 None None None 17548247 Pathogen RSp0026 hypothetical protein RS02001 1 None None None 17548243 Pathogen RSp0022 hypothetical protein RS01995 1 None None None 17548826 Common paaB PROBABLE PHENYLACETIC ACID DEGRADATION PROTEIN RSp0605 38 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 17548464 Common RSp0243 PROBABLE HEMIN TRANSPORT PROTEIN RS03723 40 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 17549734 Common RSp1515 hypothetical protein RS04792 139 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17549780 Common RSp1561 hypothetical protein RS02117 132 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 17549197 Common narJ PUTATIVE RESPIRATORY NITRATE REDUCTASE OXIDOREDUCTASE PROTEIN RSp0976 54 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 17549096 Common popC POPC PROTEIN RSp0875 41 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 17549880 Common RSp1661 hypothetical protein RS02220 13 None None None 17549837 Pathogen RSp1618 hypothetical protein RS02175 2 None None None 17549679 Pathogen RSp1460 hypothetical protein RS03084 2 None None None 17549151 Common RSp0930 hypothetical protein RS05403 5 None None None 17548941 Common RSp0720 PROBABLE SIGNAL PEPTIDE PROTEIN RS01729 15 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 17549167 Common RSp0946 PUTATIVE GLUCONATE KINASE PROTEIN RS05387 9 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 17549200 Common narX PUTATIVE TRANSMEMBRANE NITRATE/NITRITE SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RSp0979 142 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 17548282 Common eftB PUTATIVE ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT RSp0061 11 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 17549387 Common RSp1166 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS05641 11 COG4727 COG4727, Uncharacterized protein conserved in bacteria Function unknown 17548252 Common RSp0031 hypothetical protein RS02006 6 COG3416 COG3416, Uncharacterized protein conserved in bacteria Function unknown 17548372 Common RSp0151 PUTATIVE RHS-RELATED PROTEIN RS02969 78 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549812 Common RSp1593 PROBABLE TRANSCRIPTION REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02150 142 COG0583 LysR, Transcriptional regulator Transcription 17549342 Common RSp1121 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS05498 93 COG1309 AcrR, Transcriptional regulator Transcription 17548958 Common RSp0737 hypothetical protein RS01972 2 None None None 17549456 Common RSp1235 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03179 190 COG0583 LysR, Transcriptional regulator Transcription 17549057 Common RSp0836 hypothetical protein RS05359 23 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 17548231 Common RSp0010 PUTATIVE LIPOPROTEIN TRANSMEMBRANE RS01982 9 COG4377 COG4377, Predicted membrane protein Function unknown 17548384 Common RSp0163 PUTATIVE PHOSPHOPANTETHEINYL TRANSFERASE PROTEIN RS05515 47 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 17549892 Pathogen RSp1673 HYPOTHETICAL LIPOPROTEIN TRANSMEMBRANE RS02232 1 None None None 17549283 Common RSp1062 PROBABLE FERRISIDEROPHORE RECEPTOR PROTEIN RS02469 123 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 17549492 Common RSp1273 hypothetical protein RS05318 7 None None None 17549230 Common RSp1009 PROBABLE GLYCOSYLTRANSFERASE PROTEIN RS02343 78 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 17549733 Common RSp1514 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS04791 138 COG0583 LysR, Transcriptional regulator Transcription 17549071 Common prhR 3-COMPARTIMENT SIGNAL TRANSDUCTION SYSTEM, COMPONENT PRHR TRANSMEMBRANE PROTEIN RSp0850 30 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 17549705 Common RSp1486 hypothetical protein RS03057 54 COG0439 AccC, Biotin carboxylase Lipid metabolism 17549267 Common RSp1046 PROBABLE AMINO ACID TRANSPORTER TRANSMEMBRANE PROTEIN RS02383 40 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 17549046 Common RSp0825 hypothetical protein RS05370 52 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 17548902 Common trpD2 PROBABLE ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE (GLYCOSYLTRANSFERASE) PROTEIN RSp0681 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 17549202 Common RSp0981 PROBABLE TRANSMEMBRANE PROTEIN RS02313 32 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17549570 Common RSp1351 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS04780 99 COG1476 COG1476, Predicted transcriptional regulators Transcription 17549534 Common RSp1315 hypothetical protein RS05662 107 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17548594 Common fliR PROBABLE FLAGELLAR BIOSYNTHETIC FLIR TRANSMEMBRANE PROTEIN RSp0373 117 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 17548793 Pathogen RSp0572 hypothetical protein RS03907 4 None None None 17549199 Common mobB1 PROBABLE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN RSp0978 101 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 17548351 Common RSp0130 hypothetical protein RS02992 7 COG4916 COG4916, Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain Function unknown 17549273 Common kup1 PROBABLE POTASSIUM UPTAKE TRANSMEMBRANE PROTEIN RSp1052 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 17549656 Common RSp1437 hypothetical protein RS03105 4 None None None 17549132 Common RSp0911 hypothetical protein RS01683 59 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 17549546 Common ilvE3 branched-chain amino acid aminotransferase RSp1327 209 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 17549822 Common RSp1603 hypothetical protein RS02160 5 COG1403 McrA, Restriction endonuclease Defense mechanisms 17549804 Common RSp1585 PUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN RS02144 63 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548738 Common RSp0517 hypothetical protein RS00396 7 None None None 17549544 Pathogen RSp1325 PROBABLE TRANSMEMBRANE PROTEIN RS05677 1 None None None 17549119 Common dsbA2 PROBABLE THIOL:DISULFIDE INTERCHANGE SIGNAL PEPTIDE PROTEIN RSp0898 61 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 17548821 Common RSp0600 hypothetical protein RS03879 13 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 17548881 Common RSp0660 PROBABLE PORIN PROTEIN RS01789 25 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 17549026 Common RSp0805 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS01902 148 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 17548741 Common RSp0520 manganese transport protein MntH RS00399 103 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 17548449 Common RSp0228 PUTATIVE PHENOL-DEGRADATIVE GENE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS05195 168 COG1221 PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 17549219 Common RSp0998 PROBABLE TRANSMEMBRANE PROTEIN RS02331 147 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 17548456 Common RSp0235 PUTATIVE MALTOOLIGOSYL TREHALOSE SYNTHASE TRANSMEMBRANE PROTEIN RS05188 103 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 17549444 Common RSp1223 PROBABLE HIGH AFFINITY NITRATE TRANSPORTER TRANSMEMBRANE PROTEIN RS03167 41 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 17549254 Common RSp1033 hypothetical protein RS02370 2 COG2916 Hns, DNA-binding protein H-NS General function prediction only 17549190 Common RSp0969 hypothetical protein RS02300 46 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 17549599 Common RSp1380 mercuric reductase RS02078 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 17548950 Common RSp0729 hypothetical protein RS01699 57 COG3542 COG3542, Uncharacterized conserved protein Function unknown 17549886 Common RSp1667 PROBABLE SIGMA-54 INTERACTING RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02226 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 17548383 Common egl ENDOGLUCANASE PRECURSOR (ENDO-1,4-BETA-GLUCANASE) PROTEIN RSp0162 10 COG2730 BglC, Endoglucanase Carbohydrate transport and metabolism 17549399 Common RSp1178 PROBABLE COMPOSITE TWO-COMPONENT TRANSCRIPTIONAL REGULATORY (SENSOR HISTIDINE KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR PROTEIN RS05068 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17548600 Common fliL flagellar basal body-associated protein FliL RSp0379 40 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 17548965 Common RSp0744 hypothetical protein RS01964 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 17548872 Common RSp0651 PROBABLE ACETYL-COENZYME A SYNTHETASE (ACETATE--COA LIGASE) PROTEIN RS05571 219 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 17548528 Common RSp0307 PROBABLE OXIDOREDUCTASE PROTEIN RS05464 92 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 17548237 Common RSp0016 PROBABLE AMINO-ACID ATP-BINDING ABC TRANSPORTER PROTEIN RS01988 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 17549431 Pathogen RSp1210 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS03154 1 COG5510 COG5510, Predicted small secreted protein Function unknown 17549265 Common cnrT PROBABLE COBALT-NICKEL-RESISTANCE SYSTEM TRANSMEMBRANE PROTEIN RSp1044 30 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 17548421 Common RSp0200 PUTATIVE AMINOTRANSFERASE PROTEIN RS04713 237 COG5322 COG5322, Predicted dehydrogenase General function prediction only 17549171 Common pntAb2 PROBABLE TRANSMEMBRANE NAD(P) TRANSHYDROGENASE (ALPHA SUBUNIT PART 2) TRANSMEMBRANE PROTEIN RSp0950 117 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 17548346 Common RSp0125 HYPOTHETICAL PROLIN RICH TRANSMEMBRANE PROTEIN RS02997 3 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 17548681 Common tISRso10b ISRSO10-TRANSPOSASE ORFB PROTEIN RSp0460 46 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549112 Common RSp0891 PUTATIVE HYDRATASE PROTEIN RS01662 65 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 17549682 Common RSp1463 PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN RS03081 77 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 17548444 Common vanB PROBABLE VANILLATE O-DEMETHYLASE (VANILLATE DEGRADATION FERREDOXIN-LIKE) OXIDOREDUCTASE PROTEIN RSp0223 111 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 17548462 Common RSp0241 PUTATIVE ALPHA-AMYLASE-RELATED PROTEIN RS05182 66 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 17548612 Common fliG flagellar motor switch protein G RSp0391 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 17548352 Pathogen RSp0131 hypothetical protein RS02990 1 None None None 17548621 Common RSp0400 PUTATIVE TRANSMEMBRANE PROTEIN RS00828 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 17548527 Common RSp0306 hypothetical protein RS05465 27 COG5516 COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding General function prediction only 17548495 Common ggt1 PROBABLE GAMMA-GLUTAMYLTRANSPEPTIDASE SIGNAL PEPTIDE PROTEIN RSp0274 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 17549212 Common tIS1421b TIS1421-transposase protein B RSp0991 27 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17549855 Common RSp1636 PUTATIVE OXIDOREDUCTASE PROTEIN RS02194 50 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 17548935 Common RSp0714 PUTATIVE D-ALANINE AMINOTRANSFERASE (D-ASPARTATE AMINOTRANSFERASE) PROTEIN RS01735 147 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 17548999 Common RSp0778 PROBABLE TRANSCRIPTIONAL ACTIVATOR OF QUORUM SENSING AUTOINDUCER SYNTHESIS TRANSCRIPTION REGULATOR PROTEIN RS01929 85 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 17548550 Common leuB2 PROBABLE 3-ISOPROPYLMALATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0329 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 17549862 Pathogen RSp1643 hypothetical protein RS02202 1 None None None 17549604 Common RSp1385 hypothetical protein RS02073 13 COG0762 COG0762, Predicted integral membrane protein Function unknown 17549579 Pathogen RSp1360 PROBABLE TRANSMEMBRANE PROTEIN RS04825 1 None None None 17549628 Common che PUTATIVE CHEMOTAXIS RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RSp1409 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 17548988 Pathogen RSp0767 PROBABLE TRANSMEMBRANE PROTEIN RS01941 1 None None None 17548909 Common RSp0688 hypothetical protein RS01761 19 COG5472 COG5472, Predicted small integral membrane protein Function unknown 17548300 Common RSp0079 PUTATIVE DNA-BINDING TRANSCRIPTIONAL REGULATORY TRANSCRIPTION REGULATOR PROTEIN RS05542 125 COG2188 PhnF, Transcriptional regulators Transcription 17548473 Common RSp0252 hypothetical protein RS03714 9 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 17548435 Common amn AMP nucleosidase RSp0214 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 17549565 Common RSp1346 PUTATIVE TRANSMEMBRANE PROTEIN RS04775 107 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17549186 Common nrdG PUTATIVE RIBONUCLEOTIDE REDUCTASE ACTIVATING TRANSMEMBRANE PROTEIN RSp0965 83 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 17548992 Common RSp0771 hypothetical protein RS01937 4 None None None 17548744 Common RSp0523 PUTATIVE TWO COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS00402 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17548633 Common fsr PUTATIVE FOSMIDOMYCIN RESISTANCE ANTIBIOTIC RESISTANCE TRANSMEMBRANE PROTEIN RSp0412 95 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549647 Common RSp1428 hypothetical protein RS03114 36 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 17548534 Common mexC PROBABLE MULTIDRUG EFFLUX SYSTEM PROTEIN RSp0313 154 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17549109 Common RSp0888 PROBABLE OXIDOREDUCTASE PROTEIN RS01659 43 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 17548537 Common RSp0316 PUTATIVE TRANSMEMBRANE PROTEIN RS05452 51 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 17548698 Common RSp0477 PUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN RS00355 72 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549352 Pathogen RSp1131 hypothetical protein RS05485 1 None None None 17548929 Pathogen RSp0708 PROBABLE SIGNAL PEPTIDE PROTEIN RS01741 1 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 17549366 Common RSp1145 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEIN RS05462 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 17549474 Common RSp1255 hypothetical protein RS05300 27 COG3662 COG3662, Uncharacterized protein conserved in bacteria Function unknown 17548264 Common RSp0043 hypothetical protein RS02018 2 None None None 17549619 Common RSp1400 hypothetical protein RS02058 81 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 17548602 Common RSp0381 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00809 170 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17549747 Common RSp1528 hypothetical protein RS04805 6 None None None 17549507 Common RSp1288 PUTATIVE TYPE-4 FIMBRIAL BIOGENESIS PILY1-RELATED PROTEIN RS05333 37 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 17548553 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase RSp0332 218 COG1049 AcnB, Aconitase B Energy production and conversion 17548224 Common parA PROBABLE PARTITION PROTEIN RSp0003 136 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 17549500 Pathogen RSp1281 hypothetical protein RS05326 3 None None None 17548691 Common RSp0470 PROBABLE GENERAL SECRETION PATHWAY GSPG-RELATED TRANSMEMBRANE PROTEIN RS00348 84 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 17548712 Common czcC PROBABLE COBALT-ZINC-CADMIUM OUTER MEMBRANE RESISTANCE PROTEIN RSp0491 50 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548583 Common RSp0362 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS00775 53 COG4258 COG4258, Predicted exporter General function prediction only 17549842 Common RSp1623 hypothetical protein RS02180 157 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 17549044 Common RSp0823 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05372 180 COG0583 LysR, Transcriptional regulator Transcription 17549327 Common RSp1106 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02614 127 COG1846 MarR, Transcriptional regulators Transcription 17549074 Pathogen hpaB hypothetical protein RSp0853 4 None None None 17549610 Common RSp1391 hypothetical protein RS02067 8 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 17549153 Common RSp0932 PROBABLE AMINO-ACID ATP-BINDING ABC TRANSPORTER PROTEIN RS05401 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 17548295 Common RSp0074 PUTATIVE SIGNAL PEPTIDE PROTEIN RS02050 4 None None None 17548656 Pathogen RSp0435 hypothetical protein RS00894 1 None None None 17549876 Common RSp1657 PUTATIVE CYCLOPROPANE-MYCOLIC ACID SYNTHASE (METHYLTRANSFERASE) PROTEIN RS02216 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 17549055 Common exuT1 PROBABLE HEXURONATE TRANSPORTER TRANSMEMBRANE PROTEIN RSp0834 179 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17549245 Pathogen RSp1024 AWR FAMILY PROTEIN RS02361 3 None None None 17548976 Common RSp0755 PROBABLE TRANSMEMBRANE PROTEIN RS01953 4 None None None 17549126 Pathogen RSp0905 PUTATIVE TRANSMEMBRANE PROTEIN RS01676 1 None None None 17549497 Common RSp1278 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN RS05323 190 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548912 Common hmgA homogentisate 1,2-dioxygenase RSp0691 49 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 17549891 Common RSp1672 hypothetical protein RS02231 5 COG3233 COG3233, Predicted deacetylase General function prediction only 17549691 Common RSp1472 PROBABLE 4-CARBOXYMUCONOLACTONE DECARBOXYLASE PROTEIN RS03072 86 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 17548311 Common xerC site-specific tyrosine recombinase XerC RS05531 226 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 17548982 Common RSp0761 PROBABLE LIPOPROTEIN RS01947 168 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 17548807 Pathogen RSp0586 hypothetical protein RS03894 1 None None None 17549221 Common tek2 PROBABLE TEK-RELATED PROTEIN RSp1000 3 COG1498 SIK1, Protein implicated in ribosomal biogenesis, Nop56p homolog Translation, ribosomal structure and biogenesis 17548861 Common RSp0640 hypothetical protein RS03727 31 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 17548786 Pathogen RSp0565 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS03913 1 None None None 17549585 Common abpE PROBABLE THIAMINE BIOSYNTHESIS APBE TRANSMEMBRANE PROTEIN RSp1366 135 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 17548316 Pathogen RSp0095 hypothetical protein RS06004 1 None None None 17549750 Pathogen RSp1531 hypothetical protein RS06038 1 None None None 17549034 Common RSp0813 hypothetical protein RS01894 175 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 17548771 Common RSp0550 PROBABLE ACTIVATION/SECRETION SIGNAL PEPTIDE PROTEIN RS03929 51 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 17548901 Common trpC2 PROBABLE INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE PROTEIN RSp0680 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 17548926 Common RSp0705 PROBABLE AMINO-ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS01744 117 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 17548466 Common ahpC1 PROBABLE ALKYL HYDROPEROXIDE REDUCTASE (SUBUNIT C) OXIDOREDUCTASE PROTEIN RSp0245 212 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 17548870 Common mmsB PROBABLE 3-HYDROXYISOBUTYRATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0649 164 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 17549726 Common RSp1507 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEIN RS03034 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 17549093 Common hrcT HRP CONSERVED HRCT TRANSMEMBRANE PROTEIN RSp0872 106 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 17549806 Common RSp1587 PROBABLE REMNANT OF A TRANSPOSASE PROTEIN RS02141 26 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 17549611 Common flhF flagellar biosynthesis regulator FlhF RSp1392 247 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 17549201 Common narL PROBABLE NITRATE/NITRITE RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RSp0980 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17549484 Common RSp1265 PROBABLE ACETYL-COENZYME A SYNTHETASE (ACETATE--COA LIGASE) PROTEIN RS05310 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 17548319 Pathogen RSp0098 hypothetical protein RS05528 1 None None None 17548310 Pathogen RSp0089 hypothetical protein RS05532 1 None None None 17549233 Common RSp1012 PUTATIVE ACYL TRANSFERASE PROTEIN RS02346 189 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 17549405 Common RSp1184 PUTATIVE FRUCTOKINASE-LIKE PROTEIN (SUGAR KINASE) RS05074 152 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 17548930 Common RSp0709 PUTATIVE CYTOCHROME P-450-LIKE MONOOXYGENASE OXIDOREDUCTASE PROTEIN RS01740 90 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 17549767 Common RSp1548 hypothetical protein RS02104 34 COG3812 COG3812, Uncharacterized protein conserved in bacteria Function unknown 17549659 Pathogen RSp1440 hypothetical protein RS06034 1 None None None 17548692 Common RSp0471 PUTATIVE GENERAL SECRETION PATHWAY GSPG-RELATED TRANSMEMBRANE PROTEIN RS00349 13 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17549249 Pathogen RSp1028 hypothetical protein RS02365 1 None None None 17548389 Pathogen RSp0168 hypothetical protein RS04680 1 None None None 17548817 Common RSp0596 PROBABLE TRANSMEMBRANE PROTEIN RS03883 23 COG1237 COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II General function prediction only 17549671 Pathogen RSp1452 hypothetical protein RS03091 1 None None None 17548241 Common RSp0020 putative voltage-gated ClC-type chloride channel ClcB RS01992 161 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 17549835 Common RSp1616 PROBABLE TRANSCRIPTION REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02173 124 COG1609 PurR, Transcriptional regulators Transcription 17549355 Pathogen RSp1134 hypothetical protein RS05509 2 None None None 17548325 Pathogen RSp0104 PROBABLE TRANSMEMBRANE PROTEIN RS03019 1 None None None 17549518 Common tISRso3 ISRSO12-TRANSPOSASE ORFA PROTEIN RSp1299 60 None None None 17549261 Common RSp1040 PUTATIVE CATION EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RS02377 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 17549420 Common RSp1199 PROBABLE DRUG EFFLUX TRANSMEMBRANE PROTEIN RS03143 179 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17549195 Common narG PROBABLE RESPIRATORY NITRATE REDUCTASE ALPHA CHAIN OXIDOREDUCTASE PROTEIN RSp0974 101 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 17549701 Common RSp1482 hypothetical protein RS03061 139 COG1360 MotB, Flagellar motor protein Cell motility and secretion 17548824 Common RSp0603 PUTATIVE SERINE PROTEASE PROTEIN RS03876 11 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 17548590 Common RSp0369 acyl carrier protein RS00792 88 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17548719 Pathogen RSp0498 hypothetical protein RS00376 1 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 17548363 Common RSp0142 PUTATIVE GENERAL SECRETION PATHWAY GSPG RELATED TRANSMEMBRANE PROTEIN RS02978 13 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17549061 Common RSp0840 PUTATIVE METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER TRANSMEMBRANE PROTEIN RS05355 145 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548830 Pathogen RSp0609 hypothetical protein RS03758 1 None None None 17548452 Common RSp0231 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS05192 17 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 17549708 Common RSp1489 hypothetical protein RS03054 3 None None None 17549513 Pathogen RSp1294 PROBABLE SERIN-RICH TRANSMEMBRANE PROTEIN RS05339 1 None None None 17548669 Common RSp0448 hypothetical protein RS06029 2 None None None 17549087 Pathogen hrpJ HRPJ PROTEIN RSp0866 3 None None None 17549340 Common RSp1119 hypothetical protein RS05500 148 COG1733 COG1733, Predicted transcriptional regulators Transcription 17548519 Pathogen RSp0298 hypothetical protein RS05476 1 None None None 17549427 Common RSp1206 PUTATIVE TRANSMEMBRANE CYTOCHROME BD-II OXIDASE (SUBUNIT II) OXIDOREDUCTASE PROTEIN RS03150 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 17548510 Pathogen RSp0289 PROBABLE TRANSMEMBRANE PROTEIN RS03675 3 None None None 17549877 Common RSp1658 hypothetical protein RS02217 4 COG0824 FcbC, Predicted thioesterase General function prediction only 17548977 Pathogen RSp0756 hypothetical protein RS01952 2 None None None 17549349 Common arsC PUTATIVE ARSENATE REDUCTASE (ARSENICAL PUMP MODIFIER) PROTEIN RSp1128 125 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 17549454 Common RSp1233 PUTATIVE TRANSFERASE PROTEIN RS03177 15 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 17549294 Common RSp1073 PROBABLE HEMAGGLUTININ-RELATED PROTEIN RS02477 147 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 17549142 Common RSp0921 hypothetical protein RS01692 6 None None None 17548700 Common RSp0479 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEIN RS00357 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 17549785 Common coxO PROBABLE CYTOCHROME-C OXIDASE OXIDOREDUCTASE PROTEIN RSp1566 18 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 17548302 Common RSp0081 hypothetical protein RS05540 81 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 17549065 Common RSp0844 hypothetical protein RS05352 79 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 17549179 Common RSp0958 cell morphogenesis/cell wall metabolism regulator RS02289 45 COG2846 COG2846, Regulator of cell morphogenesis and NO signaling Cell division and chromosome partitioning 17549321 Common RSp1100 PUTATIVE LIPOPROTEIN TRANSMEMBRANE RS02606 104 COG2202 AtoS, FOG: PAS/PAC domain Signal transduction mechanisms 17548392 Pathogen RSp0171 hypothetical protein RS04683 1 None None None 17549883 Common RSp1664 PUTATIVE RIBONUCLEASE RNASE BN (RBN) TRANSMEMBRANE PROTEIN RS02223 38 COG1295 Rbn, Predicted membrane protein Function unknown 17549414 Common RSp1193 PROBABLE TRANSMEMBRANE PROTEIN RS03137 69 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 17549668 Common ttuD1 PROBABLE HYDROXYPYRUVATE REDUCTASE OXIDOREDUCTASE PROTEIN RSp1449 86 COG2379 GckA, Putative glycerate kinase Carbohydrate transport and metabolism 17549683 Common RSp1464 PROBABLE ATP-BINDING ABC TRANSPORTER PROTEIN RS03080 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 17549380 Common RSp1159 hypothetical protein RS05426 65 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 17549018 Common RSp0797 PROBABLE TRANSPORT TRANSMEMBRANE PROTEIN RS01910 184 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548334 Common RSp0113 hypothetical protein RS03009 162 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 17548839 Common cbiJH PROBABLE BIFUNCTIONAL: PRECORRIN-3 METHYLTRANSFERASE AND PRECORRIN-6X REDUCTASE OXIDOREDUCTASE PROTEIN RSp0618 133 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 17548380 Pathogen RSp0159 hypothetical protein RS06025 1 None None None 17549165 Common RSp0944 hypothetical protein RS05389 68 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 17548776 Common chrA PROBABLE CHROMATE TRANSPORT TRANSMEMBRANE PROTEIN RSp0555 93 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 17548663 Common RSp0442 PROBABLE CHANNEL-FORMING COMPONENT OF A MULTIDRUG RESISTANCE EFFLUX PUMP PROTEIN RS00901 111 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17549649 Pathogen RSp1430 hypothetical protein RS03112 4 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 17548880 Common copD PROBABLE COPPER RESISTANCE D TRANSMEMBRANE PROTEIN RSp0659 21 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 17548572 Common flgK flagellar hook-associated protein FlgK RSp0351 134 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 17549329 Common RSp1108 PROBABLE LIPASE SIGNAL PEPTIDE PROTEIN RS02616 137 COG0657 Aes, Esterase/lipase Lipid metabolism 17548751 Common RSp0530 PUTATIVE CATION EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RS00409 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 17549635 Common RSp1416 PROBABLE TRANSMEMBRANE PROTEIN RS03125 4 COG3904 COG3904, Predicted periplasmic protein Function unknown 17549496 Pathogen RSp1277 PUTATIVE TRANSMEMBRANE PROTEIN RS05322 2 None None None 17549031 Common atpC2 PROBABLE ATP SYNTHASE EPSILON CHAIN PROTEIN RSp0810 173 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 17549526 Common RSp1307 PUTATIVE TRANSMEMBRANE PROTEIN RS05692 11 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 17548415 Common RSp0194 3-oxoacyl-(acyl carrier protein) synthase III RS04707 192 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 17549817 Common RSp1598 PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN RS02155 160 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17549644 Common pvdA PROBABLE L-ORNITHINE 5-MONOOXYGENASE OXIDOREDUCTASE PROTEIN RSp1425 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 17549693 Common RSp1474 hypothetical protein RS06014 21 None None None 17549521 Common tISRso1 ISRSO1-TRANSPOSASE PROTEIN RSp1302 59 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549631 Common flhC transcriptional activator FlhC RSp1412 27 None None None 17548234 Common RSp0013 PROBABLE AMINO ACID-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN RS01985 145 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 17549633 Pathogen RSp1414 hypothetical protein RS05841 1 None None None 17548313 Pathogen RSp0092 hypothetical protein RS05551 1 None None None 17549079 Pathogen hrpV HRPV PROTEIN RSp0858 1 None None None 17548460 Common glgB glycogen branching enzyme RSp0239 144 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 17548596 Common fliP flagellar biosynthesis protein FliP RSp0375 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 17548789 Common RSp0568 hypothetical protein RS03910 9 None None None 17549848 Common tISRso16a PROBABLE C-TERMINUS OF TISRSO16 ORFA TRANSPOSASE PROTEIN RSp1629 17 None None None 17549890 Common rpoN2 RNA polymerase factor sigma-54 RSp1671 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 17549001 Pathogen RSp0780 hypothetical protein RS01927 1 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 17549231 Common RSp1010 hypothetical protein RS02344 19 None None None 17548915 Common RSp0694 PUTATIVE TRYPTOPHAN-2,3-DIOXYGENASE OXIDOREDUCTASE PROTEIN RS01755 40 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 17549791 Common RSp1572 PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN RS02128 135 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17548984 Common RSp0763 PROBABLE TRANSMEMBRANE PROTEIN RS01945 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 17548349 Common RSp0128 hypothetical protein RS02993 100 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 17548899 Common pdxH2 pyridoxamine 5'-phosphate oxidase RSp0678 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 17549338 Pathogen RSp1117 PUTATIVE TRANSMEMBRANE PROTEIN RS05502 1 COG2524 COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains Transcription 17549498 Common fumC fumarate hydratase RSp1279 220 COG0114 FumC, Fumarase Energy production and conversion 17548764 Pathogen RSp0543 hypothetical protein RS05799 2 None None None 17549227 Common RSp1006 PUTATIVE EPS AMINOTRANSFERASE PROTEIN RS02340 195 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 17548277 Common RSp0056 PUTATIVE DIPEPTIDASE PROTEIN RS02031 103 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 17549815 Common RSp1596 hypothetical protein RS02153 2 None None None 17549798 Common RSp1579 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02135 50 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17548229 Common dctB1 PROBABLE C4-DICARBOXYLATE TRANSPORT SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RSp0008 190 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 17549587 Common nosZ nitrous-oxide reductase RSp1368 40 COG4263 NosZ, Nitrous oxide reductase Energy production and conversion 17548603 Common fliC FLAGELLIN PROTEIN RSp0382 103 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 17549642 Common RSp1423 PUTATIVE TRANSMEMBRANE PROTEIN RS03119 14 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 17549532 Common RSp1313 hypothetical protein RS05664 11 None None None 17548547 Common RSp0326 PROBABLE ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN RS05440 87 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 17549040 Common RSp0819 PROBABLE DRUG EFFLUX LIPOPROTEIN RS01888 147 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17548971 Common RSp0750 PUTATIVE VGR-RELATED PROTEIN RS01958 50 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17548258 Common RSp0037 PROBABLE ACETYL-COENZYME A SYNTHETASE (ACETATE--COA LIGASE) PROTEIN RS02012 221 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 17548639 Common RSp0418 PROBABLE ORNITHINE CYCLODEAMINASE PROTEIN RS00875 98 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 17549159 Common RSp0938 hypothetical protein RS05395 114 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 17549548 Pathogen RSp1329 PROBABLE TRANSMEMBRANE PROTEIN RS05651 1 None None None 17548635 Common RSp0414 PROBABLE FERRIC SIDEROPHORE RECEPTOR PROTEIN RS00871 89 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 17549149 Common RSp0928 PROBABLE CATION EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RS05405 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 17548539 Common RSp0318 hypothetical protein RS05449 20 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 17548293 Pathogen RSp0072 hypothetical protein RS02049 1 None None None 17549471 Common RSp1250 hypothetical protein RS03194 2 None None None 17548588 Common RSp0367 hypothetical protein RS00787 129 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 17549105 Common RSp0884 PROBABLE TRANSMEMBRANE PROTEIN RS01655 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 17549664 Common RSp1445 PROBABLE ACTIVATION/SECRETION SIGNAL PEPTIDE PROTEIN RS03098 52 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 17549021 Common dnaE2 error-prone DNA polymerase RSp0800 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 17549299 Common RSp1078 PUTATIVE LIPOPROTEIN RS02585 3 None None None 17549180 Common RSp0959 anaerobic nitric oxide reductase transcription regulator RS02290 168 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 17549473 Common hipB PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RSp1252 19 COG1396 HipB, Predicted transcriptional regulators Transcription 17548803 Common TIS1421b IS1421-transposase protein B RSp0582 27 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17548894 Common RSp0673 PROBABLE LIPOPROTEIN RS01776 30 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 17548581 Common RSp0360 hypothetical protein RS00772 30 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 17549576 Common RSp1357 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS04822 190 COG0583 LysR, Transcriptional regulator Transcription 17549841 Common rcsC PROBABLE CAPSULAR SYNTHESIS REGULATORY (TWO-COMPONENT SENSOR KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR PROTEIN RSp1622 210 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549744 Common RSp1525 PROBABLE TRANSMEMBRANE PROTEIN RS04802 41 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 17549857 Common RSp1638 hypothetical protein RS02196 95 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 17549124 Pathogen RSp0903 PROBABLE TRANSMEMBRANE PROTEIN RS01674 1 None None None 17549397 Pathogen RSp1176 hypothetical protein RS05066 1 None None None 17549452 Common RSp1231 PUTATIVE TRANSFERASE PROTEIN RS03175 68 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 17548422 Common RSp0201 hypothetical protein RS04714 4 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 17549868 Pathogen RSp1649 PUTATIVE TRANSMEMBRANE PROTEIN RS02208 2 None None None 17548665 Common RSp0444 PUTATIVE PIRIN-LIKE PROTEIN RS00903 123 COG1741 COG1741, Pirin-related protein General function prediction only 17549888 Pathogen RSp1669 hypothetical protein RS02228 1 None None None 17548430 Common RSp0209 PROBABLE HYDROXYLASE PROTEIN RS05217 33 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 17549244 Common RSp1023 PROBABLE RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02360 180 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17548966 Common RSp0745 hypothetical protein RS01963 16 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 17548336 Common RSp0115 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS03007 7 None None None 17549072 Common prhJ TRANSCRIPTION REGULATOR PRHJ TRANSCRIPTION REGULATOR PROTEIN RSp0851 116 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17549161 Common accC2 acetyl-CoA carboxylase biotin carboxylase subunit RSp0940 224 COG0439 AccC, Biotin carboxylase Lipid metabolism 17548875 Common copS PROBABLE TWO COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN RSp0654 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549108 Common RSp0887 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS01658 158 COG0583 LysR, Transcriptional regulator Transcription 17548563 Common flgB PROBABLE FLAGELLAR BASAL-BODY ROD PROTEIN FLGB RSp0342 71 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 17548427 Common tIS1021 TIS1021 transposase RSp0206 41 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17549111 Common hpaE PUTATIVE 5-CARBOXYMETHYL-2-HYDROXYMUCONATE SEMIALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0890 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17548445 Common RSp0224 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05199 79 COG1846 MarR, Transcriptional regulators Transcription 17549567 Common RSp1348 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS04777 151 COG1522 Lrp, Transcriptional regulators Transcription 17548579 Common fabF2 3-oxoacyl-(acyl carrier protein) synthase II RSp0358 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17548269 Common soxA1 PROBABLE SARCOSINE OXIDASE (ALPHA SUBUNIT) OXIDOREDUCTASE PROTEIN RSp0048 181 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 17548809 Common RSp0588 PROBABLE TRANSPOSASE FRAGMENT PROTEIN RS03892 5 None None None 17549275 Pathogen RSp1054 hypothetical protein RS02391 1 COG1278 CspC, Cold shock proteins Transcription 17549559 Common RSp1340 PROBABLE TRANSMEMBRANE PROTEIN RS04765 27 COG3759 COG3759, Predicted membrane protein Function unknown 17549251 Common RSp1030 hypothetical protein RS02367 22 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 17548560 Common flgN PROBABLE FLAGELLA SYNTHESIS PROTEIN FLGN RSp0339 4 COG3418 COG3418, Flagellar biosynthesis/type III secretory pathway chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 17548543 Common leuA2 2-isopropylmalate synthase RSp0322 210 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 17549594 Common RSp1375 hypothetical protein RS02083 14 COG4541 COG4541, Predicted membrane protein Function unknown 17548622 Pathogen RSp0401 PROBABLE LIPOPROTEIN RS00829 2 None None None 17548555 Common RSp0334 hypothetical protein RS00710 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 17549613 Common flhB PROBABLE FLAGELLAR BIOSYNTHETIC FLHB TRANSMEMBRANE PROTEIN RSp1394 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 17549820 Pathogen RSp1601 hypothetical protein RS02158 3 None None None 17549374 Common RSp1153 PUTATIVE MOLYBDENUM-PTERIN-BINDING PROTEIN RS05434 96 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 17548358 Common RSp0137 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02983 140 COG0789 SoxR, Predicted transcriptional regulators Transcription 17549144 Pathogen RSp0923 hypothetical protein RS05412 1 None None None 17549134 Common RSp0913 hypothetical protein RS01685 122 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 17549653 Common RSp1434 hypothetical protein RS03108 219 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17549803 Pathogen RSp1584 hypothetical protein RS02143 1 None None None 17549173 Common tISRso6a ISRSO3-TRANSPOSASE ORFA PROTEIN RSp0952 84 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549860 Common RSp1641 PROBABLE TRANSMEMBRANE PROTEIN RS02199 1 None None None 17548853 Common RSp0632 hypothetical protein RS03735 3 COG4104 COG4104, Uncharacterized conserved protein Function unknown 17549541 Common RSp1322 hypothetical protein RS05655 174 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17548885 Common RSp0664 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01785 54 COG1846 MarR, Transcriptional regulators Transcription 17549213 Common RSp0992 PROBABLE SIGNAL PEPTIDE PROTEIN RS02324 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 17548481 Common RSp0260 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03706 40 COG1846 MarR, Transcriptional regulators Transcription 17548341 Common acnA2 aconitate hydratase RSp0120 223 COG1048 AcnA, Aconitase A Energy production and conversion 17549256 Common RSp1035 hypothetical protein RS02372 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 17549829 Common RSp1610 hypothetical protein RS02167 3 None None None 17549462 Common RSp1241 hypothetical protein RS03185 39 COG1510 COG1510, Predicted transcriptional regulators Transcription 17548800 Common RSp0579 PUTATIVE BACTERIOPHAGE-RELATED PROTEIN RS03900 15 None None None 17549874 Pathogen RSp1655 hypothetical protein RS02214 1 None None None 17548284 Common RSp0063 PROBABLE FERREDOXIN OXIDOREDUCTASE PROTEIN RS02038 169 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 17548819 Common RSp0598 PUTATIVE RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS03881 175 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 17548956 Pathogen RSp0735 hypothetical protein RS01974 3 None None None 17548327 Common modA PUTATIVE MOLYBDATE-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN RSp0106 162 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 17549730 Common RSp1511 hypothetical protein RS04788 11 None None None 17548586 Common hutH2 PROBABLE HISTIDINE AMMONIA-LYASE PROTEIN RSp0365 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 17549606 Common RSp1387 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02071 37 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 17548822 Common phnB hypothetical protein RSp0601 74 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 17548921 Common RSp0700 hypothetical protein RS01749 119 COG1690 RtcB, Uncharacterized conserved protein Function unknown 17548239 Common RSp0018 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS01990 143 COG0583 LysR, Transcriptional regulator Transcription 17548614 Common fliI PROBABLE FLAGELLUM-SPECIFIC ATP SYNTHASE PROTEIN RSp0393 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 17549446 Common tzs ISOPENTENYL TRANSFERASE PROTEIN RSp1225 10 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 17549042 Common RSp0821 PROBABLE TRANSMEMBRANE PROTEIN RS01886 150 COG2962 RarD, Predicted permeases General function prediction only 17548703 Common RSp0482 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00360 136 COG1522 Lrp, Transcriptional regulators Transcription 17549657 Common RSp1438 methionyl-tRNA synthetase RS03104 161 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 17549388 Common RSp1167 hypothetical protein RS05823 42 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 17549429 Common RSp1208 hypothetical protein RS03152 154 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 17549175 Common pntB2b PROBABLE NAD(P) TRANSHYDROGENASE SUBUNIT BETA (PART 2) OXIDOREDUCTASE PROTEIN RSp0954 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 17549543 Common RSp1324 PUTATIVE LIPOPROTEIN TRANSMEMBRANE RS05678 3 None None None 17548361 Common RSp0140 PUTATIVE TRANSMEMBRANE PROTEIN RS02980 11 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17549122 Pathogen RSp0901 hypothetical protein RS01672 1 None None None 17549752 Common RSp1533 PROBABLE LIPOPROTEIN RS04810 1 None None None 17549068 Pathogen RSp0847 PROBABLE AWR FAMILY PROTEIN RS05349 3 None None None 17548661 Common RSp0440 PUTATIVE MULTIDRUG RESISTANCE HOMOLOG TRANSMEMBRANE PROTEIN RS00899 163 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 17548253 Common RSp0032 salicylyl-CoA 5-hydroxylase RS02007 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 17549305 Common RSp1084 PROBABLE PILUS ASSEMBLY TRANSMEMBRANE PROTEIN RS02591 44 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 17548556 Common RSp0335 PUTATIVE HNS-LIKE TRANSCRIPTION REGULATOR PROTEIN RS00711 12 COG2916 Hns, DNA-binding protein H-NS General function prediction only 17549193 Common narK1 PUTATIVE NITRITE/NITRATE TRANSPORTER TRANSMEMBRANE PROTEIN RSp0972 116 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 17548429 Common RSp0208 hypothetical protein RS05220 7 None None None 17548722 Pathogen RSp0501 hypothetical protein RS00380 1 None None None 17549769 Pathogen RSp1550 hypothetical protein RS02106 1 None None None 17549450 Common RSp1229 hypothetical protein RS03173 56 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17549695 Common RSp1476 hypothetical protein RS03067 28 COG5649 COG5649, Uncharacterized conserved protein Function unknown 17548432 Common RSp0211 hypothetical protein RS05215 26 COG4704 COG4704, Uncharacterized protein conserved in bacteria Function unknown 17549140 Common RSp0919 hypothetical protein RS01690 3 None None None 17548768 Common tISRso8a ISRSO8-TRANSPOSASE ORFA PROTEIN RSp0547 48 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549136 Common RSp0915 hypothetical protein RS01687 11 None None None 17549403 Common RSp1182 PUTATIVE COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS05072 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 17549053 Common RSp0832 hypothetical protein RS05363 84 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 17549794 Common RSp1575 PROBABLE AMINO-ACID-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN RS02131 172 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 17548906 Common RSp0685 hypothetical protein RS01764 102 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 17549317 Common RSp1096 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02602 34 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 17548799 Pathogen RSp0578 hypothetical protein RS03901 1 None None None 17549395 Common acpA PUTATIVE ACID PHOSPHATASE PROTEIN RSp1174 37 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 17549310 Common RSp1089 PROBABLE SIGNAL PEPTIDE PROTEIN RS02596 13 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 17549896 Common RSp1677 PUTATIVE PROLIN-RICH PROTEIN RS02236 7 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 17549203 Pathogen RSp0982 PROBABLE TRANSMEMBRANE PROTEIN RS02314 1 None None None 17548924 Common RSp0703 hypothetical protein RS01746 88 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 17549482 Common nadB2 PROBABLE L-ASPARTATE OXIDASE (QUINOLINATE SYNTHETASE B) OXIDOREDUCTASE PROTEIN RSp1263 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 17549235 Pathogen epsF EPS I POLYSACCHARIDE EXPORT INNER MEMBRANE TRANSMEMBRANE PROTEIN RSp1014 1 None None None 17549263 Common RSp1042 PROBABLE TWO-COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02379 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549885 Pathogen RSp1666 PROBABLE TRANSMEMBRANE PROTEIN RS02225 1 COG5487 COG5487, Small integral membrane protein Function unknown 17548286 Common purU2 formyltetrahydrofolate deformylase RSp0065 214 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 17548867 Common RSp0646 1-aminocyclopropane-1-carboxylate deaminase RS05576 77 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 17548732 Pathogen RSp0511 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS00390 1 None None None 17548690 Common RSp0469 PROBABLE TRANSMEMBRANE PROTEIN RS00347 10 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17548910 Common RSp0689 hypothetical protein RS01760 60 COG2808 PaiB, Transcriptional regulator Transcription 17549336 Common RSp1115 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS05505 144 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 17549556 Common speE1 spermidine synthase RSp1337 103 COG4262 COG4262, Predicted spermidine synthase with an N-terminal membrane domain General function prediction only 17549686 Pathogen RSp1467 PUTATIVE TRANSMEMBRANE PROTEIN RS03077 1 None None None 17548628 Common RSp0407 PROBABLE TRANSMEMBRANE PROTEIN RS00864 2 None None None 17548917 Common RSp0696 PUTATIVE ISOPENICILLIN N EPIMERASE PROTEIN RS01753 166 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 17549761 Pathogen RSp1542 hypothetical protein RS02098 1 None None None 17549258 Common RSp1037 PROBABLE TRANSMEMBRANE PROTEIN RS02374 14 COG2259 COG2259, Predicted membrane protein Function unknown 17548413 Pathogen RSp0192 PROBABLE TRANSMEMBRANE PROTEIN RS04705 2 None None None 17549819 Pathogen RSp1600 hypothetical protein RS02157 1 None None None 17548978 Common RSp0757 hypothetical protein RS01951 3 None None None 17548841 Common cbiF PROBABLE PRECORRIN-4 C11-METHYLTRANSFERASE PROTEIN RSp0620 202 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 17549039 Common RSp0818 PROBABLE DRUG EFFLUX TRANSMEMBRANE PROTEIN RS01889 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17549728 Common RSp1509 PUTATIVE PERIPLASMIC SUBSTRATE-BINDING TRANSMEMBRANE PROTEIN RS03032 20 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 17549382 Common RSp1161 PROBABLE TWO-COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS05646 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549525 Common speE2 spermidine synthase RSp1306 103 COG4262 COG4262, Predicted spermidine synthase with an N-terminal membrane domain General function prediction only 17549675 Common RSp1456 PUTATIVE OUTER MEMBRANE LIPOPROTEIN RS05806 109 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548858 Common RSp0637 hypothetical protein RS03730 46 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 17549646 Common RSp1427 PROBABLE TRANSMEMBRANE PROTEIN RS03115 2 None None None 17548726 Common serA2 2-hydroxyacid dehydrogenase RSp0505 228 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 17549461 Common RSp1240 PUTATIVE TRANSGLYCOSYLASE PROTEIN RS03184 104 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 17549188 Common RSp0967 PUTATIVE LIPOPROTEIN RS02298 21 COG4273 COG4273, Uncharacterized conserved protein Function unknown 17549625 Common cheD3 PROBABLE METHYL-ACCEPTING CHEMOTAXIS I (SERINE CHEMORECEPTOR PROTEIN) TRANSMEMBRANE RSp1406 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17549776 Common glk PROBABLE GLUCOKINASE PROTEIN RSp1557 90 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 17548758 Pathogen RSp0537 hypothetical protein RS05705 1 None None None 17548454 Common RSp0233 PROBABLE HYDROLASE TRANSMEMBRANE PROTEIN RS05190 35 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 17549205 Common thiE2 PUTATIVE THIAMINE-PHOSPHATE PYROPHOSPHORYLASE PROTEIN RSp0984 178 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 17548521 Common RSp0300 PUTATIVE ACYLTRANSFERASE PROTEIN RS05473 21 COG3153 COG3153, Predicted acetyltransferase General function prediction only 17549296 Common RSp1075 PROBABLE ACTIVATION/SECRETION PROTEIN RS02577 37 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 17548897 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase RSp0676 141 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 17548813 Pathogen RSp0592 hypothetical protein RS03888 2 None None None 17548846 Common RSp0625 PROBABLE CHELATASE PROTEIN RS03742 75 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 17549505 Common scrR PUTATIVE DNA-BINDING SUCROSE OPERON TRANSCRIPTIONAL REPRESSOR TRANSCRIPTION REGULATOR PROTEIN RSp1286 128 COG1609 PurR, Transcriptional regulators Transcription 17549063 Common RSp0842 PROBABLE LEUCINE-RICH-REPEAT PROTEIN RS05354 19 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 17549412 Common ribB PROBABLE 3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE PROTEIN RSp1191 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 17549323 Common RSp1102 PROBABLE INTEGRASE/RECOMBINASE PROTEIN RS02608 13 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 17549356 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp1135 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17548483 Common mdoD glucan biosynthesis protein D RS03704 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 17549091 Common hrcN type III secretion system ATPase RSp0870 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 17548272 Common RSp0051 PROBABLE PORIN SIGNAL PEPTIDE PROTEIN RS02026 32 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 17549058 Pathogen RSp0837 hypothetical protein RS05358 2 None None None 17548973 Common RSp0752 PUTATIVE TRANSMEMBRANE PROTEIN RS01956 6 None None None 17548794 Common RSp0573 hypothetical protein RS03906 5 None None None 17549131 Common RSp0910 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01682 174 COG0583 LysR, Transcriptional regulator Transcription 17549774 Common popF1 SECRETED PROTEIN POPF1 RSp1555 4 None None None 17548637 Common RSp0416 PROBABLE FERRIC SIDEROPHORE RECEPTOR OUTER MEMBRANE SIGNAL PEPTIDE PROTEIN RS00873 112 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 17548267 Common soxB1 PROBABLE SARCOSINE OXIDASE (BETA SUBUNIT) OXIDOREDUCTASE PROTEIN RSp0046 128 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 17548291 Common RSp0070 PUTATIVE FORMATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS02045 175 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 17549182 Common kbl 2-amino-3-ketobutyrate coenzyme A ligase RSp0961 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 17548401 Common RSp0180 hypothetical protein RS04692 4 None None None 17549207 Common gbd2 PUTATIVE NAD-DEPENDENT 4-HYDDOXYBUTYRATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0986 170 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 17549742 Pathogen RSp1523 hypothetical protein RS04800 1 None None None 17549539 Common RSp1320 PUTATIVE DNA-BINDING TRANSCRIPTIONAL REGULATORY TRANSCRIPTION REGULATOR PROTEIN RS05657 99 COG1476 COG1476, Predicted transcriptional regulators Transcription 17549362 Common RSp1141 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05474 113 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17548491 Common RSp0270 hypothetical protein RS03694 24 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 17549157 Common RSp0936 hypothetical protein RS05397 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 17549714 Common RSp1495 hypothetical protein RS03046 107 COG0431 COG0431, Predicted flavoprotein General function prediction only 17548707 Pathogen RSp0486 hypothetical protein RS00364 2 None None None 17549846 Common RSp1627 hypothetical protein RS02185 24 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 17548688 Common RSp0467 PUTATIVE GENERAL SECRETION PATHWAY GSPF-RELATED TRANSMEMBRANE PROTEIN RS00345 141 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 17548780 Common RSp0559 PUTATIVE TRANSMEMBRANE PROTEIN RS03920 4 None None None 17549503 Common scrB PUTATIVE SUCROSE-6-PHOSPHATE HYDROLASE (SUCRASE INVERTASE) PROTEIN RSp1284 53 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 17549872 Common RSp1653 PUTATIVE CYTOCHROME C OXIDASE POLYPEPTIDE II OXIDOREDUCTASE PROTEIN RS02212 69 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 17548805 Common tISRso9 ISRSO9-TRANSPOSASE PROTEIN RSp0584 31 None None None 17548945 Pathogen RSp0724 hypothetical protein RS01726 1 None None None 17548892 Common RSp0671 enoyl-CoA hydratase RS01778 138 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 17548954 Common RSp0733 hypothetical protein RS05792 6 None None None 17548843 Common cbiD PROBABLE COBALAMIN BIOSYNTHESIS D TRANSMEMBRANE PROTEIN RSp0622 95 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 17549851 Common oprB PUTATIVE PORIN B PRECURSOR OUTER (GLUCOSE PORIN) TRANSMEMBRANE PROTEIN RSp1632 21 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 17549827 Pathogen RSp1608 hypothetical protein RS02165 1 None None None 17548574 Common RSp0353 PROBABLE TRANSMEMBRANE PROTEIN RS00757 16 COG3619 COG3619, Predicted membrane protein Function unknown 17549440 Common nasA PROBABLE NITRATE REDUCTASE LARGE SUBUNIT OXIDOREDUCTASE PROTEIN RSp1219 190 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 17549793 Common RSp1574 PUTATIVE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02130 167 COG0583 LysR, Transcriptional regulator Transcription 17549754 Common RSp1535 PROBABLE ACTIVATION/SECRETION SIGNAL PEPTIDE PROTEIN RS04812 61 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 161621736 Common RSp1595 putative 3-hydroxyphenylpropionic transporter MhpT RS02152 189 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549237 Common wecC UDP-N-acetyl-D-mannosamine dehydrogenase RSp1016 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 17548315 Common TIS1421a TIS1421-transposase protein A RSp0094 71 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548279 Common stcD PROBABLE STACHYDRINE UTILIZATION OXIDOREDUCTASE PROTEIN RSp0058 182 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 17548632 Common RSp0411 PROBABLE TRANSMEMBRANE PROTEIN RS00868 19 COG0628 PerM, Predicted permease General function prediction only 17549408 Common ndeD PROBABLE N-ACYL-D-GLUTAMATE DEACYLASE PROTEIN RSp1187 57 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 17548761 Common RSp0540 PROBABLE HEMAGGLUTININ-RELATED PROTEIN RS05701 93 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 17548774 Common RSp0553 hypothetical protein RS03926 85 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 17549225 Common RSp1004 PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE TRANSMEMBRANE PROTEIN RS02337 156 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 17548715 Common hit PUTATIVE HIT-LIKE PROTEIN RSp0494 185 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 17549459 Common RSp1238 PROBABLE SIGNAL PEPTIDE PROTEIN RS03182 115 COG2353 COG2353, Uncharacterized conserved protein Function unknown 17548783 Common RSp0562 hypothetical protein RS03916 90 COG1733 COG1733, Predicted transcriptional regulators Transcription 17549666 Common RSp1447 PUTATIVE LEU/ILE/VAL-BINDING LIPOPROTEIN TRANSMEMBRANE RS03096 118 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 17549801 Pathogen RSp1582 hypothetical protein RS02138 1 None None None 17548227 Common galU2 PROBABLE UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE UDP-GLUCOSE PYROPHOSPHORYLASE PROTEIN RSp0006 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 17549589 Common nosD PROBABLE COPPER-BINDING PERIPLASMIC NOSD SIGNAL PEPTIDE PROTEIN RSp1370 52 COG3420 NosD, Nitrous oxidase accessory protein Inorganic ion transport and metabolism 17548298 Common RSp0077 hypothetical protein RS05544 39 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 17549590 Common nosF PROBABLE COPPER ATP-BINDING ABC TRANSPORTER PROTEIN RSp1371 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 17548376 Common tISRso9 ISRSO9-TRANSPOSASE PROTEIN RSp0155 31 None None None 17549787 Common RSp1568 hypothetical protein RS02124 9 COG5605 COG5605, Predicted small integral membrane protein Function unknown 17549012 Common RSp0791 hypothetical protein RS01916 22 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17549678 Common RSp1459 PROBABLE SIGNAL PEPTIDE PROTEIN RS03085 109 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 17549489 Common RSp1270 PUTATIVE SIGNAL PEPTIDE PROTEIN RS05315 20 None None None 17548938 Pathogen RSp0717 hypothetical protein RS01732 1 None None None 17549720 Common RSp1501 PROBABLE SIGNAL PEPTIDE PROTEIN RS03040 69 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 17549005 Common RSp0784 PUTATIVE OMEGA-3 FATTY ACID DESATURASE TRANSMEMBRANE PROTEIN RS01923 47 COG3239 DesA, Fatty acid desaturase Lipid metabolism 17548530 Common RSp0309 hypothetical protein RS05461 35 COG1695 COG1695, Predicted transcriptional regulators Transcription 17549242 Pathogen RSp1021 hypothetical protein RS02358 1 None None None 17549596 Common RSp1377 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS02081 163 COG1522 Lrp, Transcriptional regulators Transcription 17549652 Pathogen RSp1433 hypothetical protein RS03109 1 None None None 17548734 Common RSp0513 PUTATIVE TRANSMEMBRANE PROTEIN RS05802 6 None None None 17548355 Common RSp0134 PROBABLE TRANSMEMBRANE PROTEIN RS02986 19 COG1289 COG1289, Predicted membrane protein Function unknown 17549335 Common RSp1114 PUTATIVE OUTER-MEMBRANE DRUG EFFLUX PROTEIN RS05506 119 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17549215 Common uvrA2 PROBABLE EXCINUCLEASE ABC SUBUNIT A (DNA REPAIR ATP-BINDING) ABC TRANSPORTER PROTEIN RSp0994 236 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 17549833 Common RSp1614 PROBABLE TRANSPORT TRANSMEMBRANE PROTEIN RS02171 226 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17548932 Common RSp0711 PROBABLE TRANSMEMBRANE PROTEIN RS01738 17 COG5486 COG5486, Predicted metal-binding integral membrane protein Function unknown 17549433 Pathogen RSp1212 hypothetical protein RS03156 1 None None None 17548883 Common RSp0662 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01787 167 COG0583 LysR, Transcriptional regulator Transcription 17548644 Common RSp0423 PROBABLE ALDOLASE PROTEIN RS00880 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 17549464 Common RSp1243 PUTATIVE TRANSMEMBRANE CYTOCHROME BD-II OXIDASE (SUBUNIT II) OXIDOREDUCTASE PROTEIN RS03187 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 17549277 Common RSp1056 beta alanine--pyruvate transaminase RS02393 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 17549270 Pathogen RSp1049 hypothetical protein RS02386 1 None None None 17549866 Common RSp1647 PUTATIVE METHYLTRANSFERASE PROTEIN RS02206 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 17548968 Common RSp0747 hypothetical protein RS01961 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 17548577 Common RSp0356 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS00762 8 None None None 17549369 Common RSp1148 PUTATIVE HYDROLASE SIGNAL PEPTIDE PROTEIN RS05450 85 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17549530 Pathogen RSp1311 PROBABLE TRANSMEMBRANE PROTEIN RS05685 1 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 17548502 Common RSp0281 hypothetical protein RS03683 49 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 17549550 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp1331 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17548962 Common RSp0741 PUTATIVE TRANSMEMBRANE PROTEIN RS01967 14 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 17548440 Common RSp0219 PROBABLE TRANSMEMBRANE PROTEIN RS05205 97 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 17549346 Pathogen RSp1125 hypothetical protein RS05495 1 None None None 17549377 Pathogen RSp1156 PROBABLE SIGNAL PEPTIDE PROTEIN RS05430 1 None None None 17549129 Common RSp0908 hypothetical protein RS01680 66 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 17548486 Common RSp0265 PROBABLE ACETYLTRANSFERASE PROTEIN RS03701 51 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 17548616 Common fliK PROBABLE FLAGELLAR HOOK-LENGTH CONTROL PROTEIN RSp0395 32 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 17548424 Common RSp0203 PROBABLE ACYL-COA THIOESTER HYDROLASE-RELATED PROTEIN RS05225 136 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 17549859 Pathogen RSp1640 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS02198 1 None None None 17548548 Common RSp0327 hypothetical protein RS05439 29 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 17548810 Common RSp0589 short chain dehydrogenase RS03890 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 17548598 Common fliN PROBABLE FLAGELLAR MOTOR SWITCH PROTEIN FLIN RSp0377 122 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 17549478 Pathogen RSp1259 PROBABLE TRANSMEMBRANE PROTEIN RS05304 1 None None None 17548961 Common RSp0740 hypothetical protein RS01968 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 17549448 Common RSp1227 PUTATIVE LUCIFERASE (MONOOXYGENASE) OXIDOREDUCTASE PROTEIN RS03171 40 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 17548832 Common RSp0611 PROBABLE TRANSMEMBRANE PROTEIN RS03756 9 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 17549116 Common RSp0895 4-hydroxy-2-ketovalerate aldolase RS01666 161 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 17549025 Common fusA2 elongation factor G RSp0804 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 17549574 Common RSp1355 PUTATIVE LIPOPROTEIN TRANSMEMBRANE RS04819 3 None None None 17549103 Pathogen RSp0882 hypothetical protein RS01653 1 None None None 17548649 Common RSp0428 PUTATIVE PSEUDOGENE PROTEIN RS00887 151 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 17548605 Common fliS PROBABLE FLAGELLAR PROTEIN FLIS RSp0384 75 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 17548504 Common dinF PROBABLE DNA-DAMAGE-INDUCIBLE F TRANSMEMBRANE PROTEIN RSp0283 58 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 17548437 Common RSp0216 PROBABLE SERINE/THREONINE-PROTEIN KINASE RS05210 106 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 17548724 Common tISRso12a ISRSO12-TRANSPOSASE ORFA PROTEIN RSp0503 60 None None None 17548565 Common flgD PROBABLE BASAL-BODY ROD MODIFICATION PROTEIN FLGD RSp0344 86 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 17549662 Common RSp1443 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS03100 17 COG4875 COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold Function unknown 17548512 Common RSp0291 PROBABLE HEMOLYSIN SECRETION-RELATED TRANSMEMBRANE PROTEIN RS03671 123 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 17549608 Common RSp1389 hypothetical protein RS02069 85 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 17548558 Common RSp0337 PROBABLE PORIN PRECURSOR TRANSMEMBRANE PROTEIN RS00714 30 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 17548304 Pathogen RSp0083 hypothetical protein RS05555 1 None None None 17548994 Pathogen RSp0773 PUTATIVE SIGNAL PEPTIDE PROTEIN RS01935 1 None None None 17549569 Common RSp1350 hypothetical protein RS04779 20 COG3832 COG3832, Uncharacterized conserved protein Function unknown 17549623 Common RSp1404 PROBABLE CHEMOTAXIS PROTEIN RS02054 85 COG1871 CheD, Chemotaxis protein; stimulates methylation of MCP proteins Cell motility and secretion / Signal transduction mechanisms 17548356 Common RSp0135 PUTATIVE HYDROLASE TRANSMEMBRANE PROTEIN RS02985 26 COG4257 Vgb, Streptogramin lyase Defense mechanisms 17548730 Common RSp0509 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS00388 8 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 17548964 Common RSp0743 hypothetical protein RS01965 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 17548301 Common RSp0080 hypothetical protein RS05541 96 COG1733 COG1733, Predicted transcriptional regulators Transcription 17548987 Common RSp0766 PROBABLE TRANSMEMBRANE PROTEIN RS01942 9 None None None 17548434 Pathogen RSp0213 hypothetical protein RS05218 1 None None None 17549102 Common RSp0881 PUTATIVE TRANSMEMBRANE PROTEIN RS01652 23 None None None 17549627 Common cheA PROBABLE CHEMOTAXIS SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN RSp1408 151 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 17548396 Common RSp0175 PUTATIVE VGR-RELATED PROTEIN RS04687 53 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17548373 Pathogen RSp0152 hypothetical protein RS02967 1 None None None 17549588 Common nosR PROBABLE TRANSMEMBRANE REGULATORY NOSR TRANSCRIPTION REGULATOR PROTEIN RSp1369 82 COG3901 NosR, Regulator of nitric oxide reductase transcription Transcription 17549704 Pathogen RSp1485 PROBABLE TRANSMEMBRANE PROTEIN RS03058 1 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548308 Common RSp0087 hypothetical protein RS05535 5 None None None 17548536 Common RSp0315 PROBABLE TRANSMEMBRANE SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN RS05453 194 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17548991 Common RSp0770 hypothetical protein RS01938 3 None None None 17549887 Common RSp1668 PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN RS02227 171 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 17548606 Common fliT PROBABLE FLAGELLAR PROTEIN FLIT RSp0385 10 None None None 17548617 Common RSp0396 PROBABLE TRANSMEMBRANE PROTEIN RS00824 126 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 17549852 Common xylF PROBABLE D-XYLOSE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN RSp1633 105 COG4213 XylF, ABC-type xylose transport system, periplasmic component Carbohydrate transport and metabolism 17549344 Common RSp1123 PUTATIVE OXIDOREDUCTASE PROTEIN RS05496 75 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17548942 Common RSp0721 PROBABLE TRANSMEMBRANE PROTEIN RS01728 4 None None None 17549127 Common RSp0906 PUTATIVE SIGNAL PEPTIDE PROTEIN RS01677 10 None None None 17549487 Common RSp1268 PROBABLE INTEGRAL MEMBRANE TRANSMEMBRANE PROTEIN RS05313 46 COG0730 COG0730, Predicted permeases General function prediction only 17549295 Common RSp1074 PUTATIVE HEMOLYSIN ACTIVATING-LIKE PROTEIN RS02573 12 COG2994 HlyC, ACP:hemolysin acyltransferase (hemolysin-activating protein) Posttranslational modification, protein turnover, chaperones 17548485 Common RSp0264 hypothetical protein RS03703 25 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 17548997 Pathogen RSp0776 hypothetical protein RS01932 1 None None None 17549537 Common RSp1318 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS05659 62 COG0640 ArsR, Predicted transcriptional regulators Transcription 17548492 Common RSp0271 hypothetical protein RS03693 10 None None None 17548869 Common RSp0648 enoyl-CoA hydratase RS05574 184 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 17548345 Common RSp0124 PUTATIVE LIPOPROTEIN TRANSMEMBRANE RS02998 13 COG5373 COG5373, Predicted membrane protein Function unknown 17548848 Common RSp0627 PUTATIVE FERREDOXIN PROTEIN RS03740 82 COG3411 COG3411, Ferredoxin Energy production and conversion 17549014 Common RSp0793 hypothetical protein RS01914 5 None None None 17548873 Common RSp0652 PROBABLE ACYL-COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS05570 164 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 17548949 Pathogen RSp0728 hypothetical protein RS01700 2 None None None 17548998 Pathogen RSp0777 PUTATIVE TRANSMEMBRANE PROTEIN RS01931 1 None None None 17548457 Common RSp0236 PUTATIVE 4-ALPHA-GLUCANOTRANSFERASE (AMYLOMALTASE) PROTEIN RS05187 118 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 17548760 Common RSp0539 hypothetical protein RS00418 29 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 17549562 Common RSp1343 hypothetical protein RS04767 35 None None None 17549680 Pathogen RSp1461 PROBABLE SIGNAL PEPTIDE PROTEIN RS03083 1 None None None 17549029 Common RSp0808 PROBABLE HEMAGGLUTININ-RELATED TRANSMEMBRANE PROTEIN RS01899 3 None None None 17549601 Common RSp1382 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS02076 5 None None None 17549185 Common RSp0964 hypothetical protein RS02295 20 None None None 17549843 Common tISTRso16- REMNANT OF A ISRSO16-TRANSPOSASE ORFA PROTEIN RSp1624 17 None None None 17548895 Common RSp0674 PROBABLE LIPOPROTEIN RS01775 20 COG4259 COG4259, Uncharacterized protein conserved in bacteria Function unknown 17549674 Common RSp1455 PROBABLE TWO-COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS03088 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17548856 Common RSp0635 PUTATIVE ACYLTRANSFERASE TRANSMEMBRANE PROTEIN RS03732 37 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 17549467 Common RSp1246 PROBABLE LIPOPROTEIN RS03190 174 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17548448 Common fcs feruloyl-CoA synthase RSp0227 195 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17548699 Common tISRso7 ISRSO7-TRANSPOSASE PROTEIN RSp0478 85 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548742 Common hscC PROBABLE CHAPERONE TRANSMEMBRANE PROTEIN RSp0521 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 17548364 Common RSp0143 PUTATIVE GSPD-RELATED PROTEIN RS02977 140 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 17549655 Common RSp1436 PUTATIVE ACETYLTRANSFERASE PROTEIN RS03106 70 COG0456 RimI, Acetyltransferases General function prediction only 17548728 Common cheD1 PROBABLE METHYL-ACCEPTING CHEMOTAXIS I MCP-I SERINE CHEMORECEPTOR PROTEIN TRANSMEMBRANE RSp0507 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548508 Common hmsF PUTATIVE HEMIN STORAGE SIGNAL PEPTIDE PROTEIN RSp0287 76 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 17548533 Common mexD PROBABLE MULTIDRUG EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RSp0312 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17548353 Common RSp0132 PROBABLE TRANSMEMBRANE PROTEIN RS02988 174 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 17549873 Pathogen RSp1654 PROBABLE TRANSMEMBRANE PROTEIN RS02213 1 None None None 17548593 Common RSp0372 hypothetical protein RS00799 27 None None None 17549443 Common nirB PROBABLE NITRITE REDUCTASE NADPH (LARGE SUBUNIT) OXIDOREDUCTASE PROTEIN RSp1222 205 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 17549113 Common RSp0892 PROBABLE 4-OXALOCROTONATE DECARBOXYLASE PROTEIN RS01663 57 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 17548474 Common RSp0253 PROBABLE TRANSMEMBRANE PROTEIN RS03713 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 17548739 Common RSp0518 PUTATIVE VGR-RELATED PROTEIN RS00397 47 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17548889 Common RSp0668 hypothetical protein RS01781 38 COG5495 COG5495, Uncharacterized conserved protein Function unknown 17548562 Common flgA flagellar basal body P-ring biosynthesis protein FlgA RSp0341 47 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 17548629 Pathogen RSp0408 hypothetical protein RS00865 1 None None None 17548953 Pathogen RSp0732 PUTATIVE TRANSMEMBRANE PROTEIN RS05796 2 None None None 17549591 Common nosY PROBABLE NOSY TRANSMEMBRANE PROTEIN RSp1372 36 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 17549545 Common RSp1326 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05669 190 COG0583 LysR, Transcriptional regulator Transcription 17549740 Common RSp1521 PROBABLE ACVB-RELATED PROTEIN RS04798 19 COG3946 VirJ, Type IV secretory pathway, VirJ component Intracellular trafficking and secretion 17549547 Common RSp1328 PUTATIVE EFFLUX PUMP ANTIBIOTIC RESISTANCE TRANSMEMBRANE PROTEIN RS05653 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548443 Common vanA PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT OXIDOREDUCTASE PROTEIN RSp0222 77 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 17549224 Common xpsR TRANSCRIPTION REGULATOR XPSR TRANSCRIPTION REGULATOR PROTEIN RSp1003 4 None None None 17548370 Common RSp0149 PROBABLE GENERAL SECRETION PATHWAY GSPF-RELATED TRANSMEMBRANE PROTEIN RS02971 138 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 17548784 Common RSp0563 PUTATIVE THIOL:DISULFIDE INTERCHANGE PROTEIN RS03915 136 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 17549236 Common epsE EPS I POLYSACCHARIDE EXPORT INNER MEMBRANE TRANSMEMBRANE PROTEIN RSp1015 2 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 17549718 Common RSp1499 PUTATIVE PILI ASSEMBLY CHAPERONE TRANSMEMBRANE PROTEIN RS03042 26 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 17549600 Common phnA PROBABLE PHNA PROTEIN ALKYLPHOSPHONATE UPTAKE RSp1381 107 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 17549648 Common RSp1429 PROBABLE ESTERASE PROTEIN RS03113 94 COG0657 Aes, Esterase/lipase Lipid metabolism 17548851 Common RSp0630 PROBABLE PHOSPHOLIPASE PROTEIN RS03737 16 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 17548913 Common RSp0692 PROBABLE TRANSCRIPTION REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS01757 105 COG0583 LysR, Transcriptional regulator Transcription 17548425 Common RSp0204 hypothetical protein RS05224 18 COG4104 COG4104, Uncharacterized conserved protein Function unknown 17548406 Common RSp0185 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS04697 19 COG1802 GntR, Transcriptional regulators Transcription 17549800 Common katE PROBABLE CATALASE HYDROPEROXIDASE HPII OXIDOREDUCTASE PROTEIN RSp1581 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 17549865 Pathogen RSp1646 PUTATIVE TRANSMEMBRANE PROTEIN RS02205 2 None None None 17549475 Common RSp1256 PROBABLE INTEGRAL MEMBRANE TRANSMEMBRANE PROTEIN RS05301 212 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549365 Common RSp1144 PROBABLE TRANSMEMBRANE PROTEIN RS05467 220 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 17549554 Common RSp1335 PUTATIVE RHS-RELATED PROTEIN RS04760 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548657 Common RSp0436 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00895 117 COG1802 GntR, Transcriptional regulators Transcription 17548696 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp0475 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17549398 Common RSp1177 PROBABLE TRANSMEMBRANE PROTEIN RS05067 129 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549216 Common dctA2 PROBABLE C4-DICARBOXYLATE TRANSPORT TRANSMEMBRANE PROTEIN RSp0995 162 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 17548787 Common tISRso10a ISRSO10-TRANSPOSASE ORFA PROTEIN RSp0566 37 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549514 Common RSp1295 PROBABLE TRANSMEMBRANE PROTEIN RS05340 12 None None None 17548653 Common RSp0432 hypothetical protein RS00891 30 COG3806 ChrR, Transcriptional activator Transcription 17549168 Common idnO PROBABLE GLUCONATE 5-DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0947 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17549434 Common RSp1213 PROBABLE TRANSMEMBRANE PROTEIN RS03157 165 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 17549334 Common YS02621 PROBABLE TRANSMEMBRANE MULTIDRUG-EFFLUX SYSTEM LIPOPROTEIN TRANSMEMBRANE RSp1113 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17549616 Common aroQ2 3-dehydroquinate dehydratase RSp1397 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 17549077 Pathogen hrpX HRPX PROTEIN RSp0856 1 None None None 17549037 Pathogen RSp0816 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01891 4 COG1309 AcrR, Transcriptional regulator Transcription 17548265 Common RSp0044 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS02019 155 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 17549796 Common RSp1577 PROBABLE AMINO-ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS02133 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 17548273 Common RSp0052 PROBABLE METABOLITE TRANSPORT TRANSMEMBRANE PROTEIN RS02027 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549246 Common RSp1025 PUTATIVE AMINO-ACID EFFLUX TRANSMEMBRANE PROTEIN RS02362 109 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 17549391 Common RSp1170 PUTATIVE SIGNAL PEPTIDE PROTEIN RS05060 6 None None None 17549411 Common eda keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase RSp1190 125 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 17549376 Common RSp1155 hypothetical protein RS05432 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 17549491 Pathogen RSp1272 PROBABLE TRANSMEMBRANE PROTEIN RS05317 2 None None None 17548890 Common RSp0669 PROBABLE OUTER MEMBRANE CHANEL LIPOPROTEIN RS01780 115 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548711 Common RSp0490 PUTATIVE SIGNAL PEPTIDE PROTEIN RS00368 1 None None None 17549324 Pathogen RSp1103 hypothetical protein RS02609 1 None None None 17548223 Common cspD3 PROBABLE COLD SHOCK-LIKE TRANSCRIPTION REGULATOR PROTEIN RSp0002 181 COG1278 CspC, Cold shock proteins Transcription 17549133 Common RSp0912 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS01684 173 COG0583 LysR, Transcriptional regulator Transcription 17549699 Common RSp1480 hypothetical protein RS03063 9 None None None 17548259 Common RSp0038 PUTATIVE 4-HYDROXYBENZOYL-COA THIOESTERASE PROTEIN RS02013 32 COG0824 FcbC, Predicted thioesterase General function prediction only 17548854 Common RSp0633 hypothetical protein RS03734 1 None None None 17549457 Pathogen RSp1236 hypothetical protein RS03180 1 None None None 17549312 Common cpaA2 PROBABLE PREPILIN PEPTIDASE TRANSMEMBRANE PROTEIN RSp1091 20 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 17549419 Common RSp1198 PROBABLE DRUG EFFLUX PUMP TRANSMEMBRANE PROTEIN RS03142 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17549378 Common RSp1157 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05428 88 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 17549561 Pathogen RSp1342 PROBABLE TRANSMEMBRANE PROTEIN RS04770 1 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 17549082 Pathogen hrcQ HRP CONSERVED PROTEIN HRCQ RSp0861 4 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 17549069 Pathogen RSp0848 hypothetical protein RS01619 1 None None None 17548721 Common RSp0500 hypothetical protein RS00379 3 None None None 17548675 Common RSp0454 PROBABLE RHS-RELATED PROTEIN RS00940 63 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548497 Common cysK1 cysteine synthase A RSp0276 223 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 17548772 Common RSp0551 PROBABLE HYDROLASE TRANSMEMBRANE PROTEIN RS03928 158 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 17548296 Common kgtP1 PUTATIVE ALPHA-KETOGLUTARATE PERMEASE TRANSMEMBRANE PROTEIN RSp0075 143 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548903 Common RSp0682 PROBABLE TRIMETHYLAMINE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS01767 172 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 17549089 Pathogen hrpH HRPH PROTEIN RSp0868 1 None None None 17549290 Common RSp1069 PUTATIVE TRANSMEMBRANE PROTEIN RS02556 3 None None None 17549697 Common RSp1478 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03065 52 COG0583 LysR, Transcriptional regulator Transcription 17548756 Common RSp0535 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00415 169 COG0583 LysR, Transcriptional regulator Transcription 17548306 Common RSp0085 PUTATIVE RHS-RELATED PROTEIN RS05538 61 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548625 Pathogen RSp0404 PROBABLE TRANSMEMBRANE PROTEIN RS00861 1 None None None 17549779 Common edd phosphogluconate dehydratase RSp1560 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 17549162 Common accB2 PUTATIVE BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE (BCCP) RSp0941 185 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 17548488 Common RSp0267 hypothetical protein RS03699 7 COG4849 COG4849, Uncharacterized protein conserved in bacteria Function unknown 17548704 Common RSp0483 ornithine cyclodeaminase RS00361 81 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 17548717 Common RSp0496 hypothetical protein RS00374 4 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 17549222 Pathogen RSp1001 PROBABLE SIGNAL PEPTIDE PROTEIN RS02334 1 None None None 17548567 Common flgF PROBABLE FLAGELLAR BASAL-BODY ROD PROTEIN FLGF RSp0346 125 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 17548845 Common RSp0624 cobalt-precorrin-6Y C(5)-methyltransferase RS03743 19 COG2241 CobL, Precorrin-6B methylase 1 Coenzyme metabolism 17549690 Common RSp1471 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03073 125 COG0583 LysR, Transcriptional regulator Transcription 17549309 Common RSp1088 hypothetical protein RS02597 1 None None None 17548479 Common RSp0258 hypothetical protein RS03708 56 COG1695 COG1695, Predicted transcriptional regulators Transcription 17549771 Common RSp1552 PROBABLE PROTEASE SIGNAL PEPTIDE PROTEIN RS02108 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 17548884 Common RSp0663 PROBABLE TRANSPORT TRANSMEMBRANE PROTEIN RS01786 220 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549670 Pathogen RSp1451 hypothetical protein RS03092 1 None None None 17548500 Common RSp0279 PROBABLE SIGNAL PEPTIDE PROTEIN RS03685 14 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 17548526 Common RSp0305 PROBABLE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS05466 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17548918 Common RSp0697 PROBABLE DEHYDROGENASE/REDUCTASE OXIDOREDUCTASE PROTEIN RS01752 220 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17548410 Common RSp0189 PROBABLE TRANSMEMBRANE PROTEIN RS04701 33 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 17549582 Common RSp1363 PROBABLE METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER TRANSMEMBRANE PROTEIN RS04782 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548408 Pathogen RSp0187 hypothetical protein RS04699 1 None None None 17549825 Pathogen RSp1606 hypothetical protein RS02163 1 None None None 17549286 Common RSp1065 PROBABLE SIGNAL PEPTIDE PROTEIN RS02471 3 None None None 17548419 Common RSp0198 PROBABLE TRANSMEMBRANE PROTEIN RS04711 2 None None None 17549282 Common RSp1061 PROBABLE OXIDOREDUCTASE PROTEIN RS02398 148 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 17549756 Pathogen RSp1537 PROBABLE TRANSMEMBRANE PROTEIN RS04814 2 None None None 17549393 Common RSp1172 PROBABLE TRANSMEMBRANE PROTEIN RS05062 213 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 17548387 Common cysC2 PROBABLE ADENYLYLSULFATE KINASE PROTEIN RSp0166 143 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 17548439 Common RSp0218 hypothetical protein RS05208 8 COG3380 COG3380, Predicted NAD/FAD-dependent oxidoreductase General function prediction only 17549187 Common RSp0966 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS02297 113 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 17548391 Common RSp0170 hypothetical protein RS04682 3 None None None 17549343 Common RSp1122 hypothetical protein RS05497 96 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 17549895 Common RSp1676 PROBABLE COMPOSITE TWO-COMPONENT REGULATORY (SENSOR KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR PROTEIN RS02235 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549493 Common RSp1274 PROBABLE TRANSMEMBRANE PROTEIN RS05319 33 None None None 17549266 Pathogen RSp1045 hypothetical protein RS02382 1 COG2198 ArcB, FOG: HPt domain Signal transduction mechanisms 17548288 Common RSp0067 PROBABLE TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS02042 178 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 17548506 Common RSp0285 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03679 141 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17549480 Pathogen RSp1261 PROBABLE SIGNAL PEPTIDE PROTEIN RS05306 2 None None None 17549120 Common RSp0899 PROBABLE HYDRATASE PROTEIN RS01670 7 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 17548314 Common TIS1421b TIS1421-transposase protein B RSp0093 27 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17548767 Pathogen RSp0546 hypothetical protein RS03935 1 None None None 17549138 Common RSp0917 PROBABLE TWO COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS01694 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549023 Common RSp0802 PROBABLE TRANSMEMBRANE PROTEIN RS01905 39 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 17548911 Common RSp0690 PROBABLE FUMARYLACETOACETASE (FUMARYLACETOACETATE HYDROLASE) PROTEIN RS01759 48 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 17548246 Common RSp0025 hypothetical protein RS06177 9 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 17549056 Common RSp0835 nicotinamide-nucleotide adenylyltransferase RS05360 107 COG1056 NadR, Nicotinamide mononucleotide adenylyltransferase Coenzyme metabolism 17548980 Common RSp0759 hypothetical protein RS01949 35 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 17548238 Common RSp0017 PROBABLE AMINO-ACID ATP-BINDING ABC TRANSPORTER PROTEIN RS01989 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 17549238 Common epsC UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE PROTEIN RSp1017 155 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 17548250 Common RSp0029 PUTATIVE HNS-LIKE TRANSCRIPTION REGULATOR PROTEIN RS02004 17 COG2916 Hns, DNA-binding protein H-NS General function prediction only 17548262 Common TIS1421a TIS1421-transposase protein A RSp0041 71 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549702 Common RSp1483 hypothetical protein RS03060 10 None None None 17549735 Common RSp1516 serine/threonine dehydratase RS04793 203 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 17548320 Pathogen RSp0099 HYPOTHETICAL AWR PROTEIN 1 RS03024 2 None None None 17548936 Common RSp0715 PUTATIVE TRANSMEMBRANE PROTEIN RS01734 1 None None None 17549198 Common narI PROBABLE RESPIRATORY NITRATE REDUCTASE TRANSMEMBRANE PROTEIN RSp0977 56 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 17549445 Common aer PROBABLE AEROTAXIS SENSOR RECEPTOR (CHEMOTAXIS TRANSDUCER) TRANSMEMBRANE PROTEIN RSp1224 139 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548328 Common RSp0107 PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN RS03015 80 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17548796 Common RSp0575 hypothetical protein RS03904 4 None None None 17549099 Common prhA OUTER MEMBRANE RECEPTOR PRHA SIGNAL PEPTIDE PROTEIN RSp0878 86 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 17548745 Common RSp0524 PROBABLE TRANSMEMBRANE SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN RS00403 142 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549384 Pathogen RSp1163 hypothetical protein RS05644 1 None None None 17549166 Common RSp0945 2-hydroxyacid dehydrogenase RS05388 229 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 17548630 Pathogen RSp0409 hypothetical protein RS00866 1 None None None 17549049 Common gudP PUTATIVE GLUCARATE TRANSPORTER (D-GLUCARATE PERMEASE) TRANSMEMBRANE PROTEIN RSp0828 185 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 17548686 Common tISRso13 ISRSO13-TRANSPOSASE PROTEIN RSp0465 4 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 17549831 Common ttuC PROBABLE TARTRATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp1612 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 17549838 Common RSp1619 hypothetical protein RS02176 19 COG3969 COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase General function prediction only 17548920 Common prfH peptide chain release factor-like protein RS01750 215 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 17549722 Common RSp1503 PROBABLE MAJOR ANAEROBICALLY INDUCED OUTER MEMBRANE TRANSMEMBRANE PROTEIN RS03038 106 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 17548333 Common RSp0112 PUTATIVE CARBONIC ANHYDRASE PROTEIN RS03010 149 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 17549150 Common RSp0929 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS05404 22 COG5569 COG5569, Uncharacterized conserved protein Function unknown 17549017 Common RSp0796 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS01911 43 COG1309 AcrR, Transcriptional regulator Transcription 17549303 Common RSp1082 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS02589 17 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 17549423 Common RSp1202 PUTATIVE O-ANTIGEN POLYMERASE TRANSMEMBRANE PROTEIN RS03146 3 None None None 17549350 Common arsR PUTATIVE ARSENICAL RESISTANCE OPERON REPRESSOR TRANSCRIPTION REGULATOR PROTEIN RSp1129 64 COG0640 ArsR, Predicted transcriptional regulators Transcription 17549685 Pathogen RSp1466 PROBABLE SIGNAL PEPTIDE PROTEIN RS03078 1 None None None 17548398 Common RSp0177 hypothetical protein RS04689 18 None None None 17548863 Common RSp0642 PROBABLE PEPTIDE SYNTHETASE PROTEIN RS05859 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 17548584 Common RSp0363 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS00776 24 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 17548645 Common RSp0424 PROBABLE DIAMINOPIMELATE DECARBOXYLASE PROTEIN RS00881 208 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 17549051 Common garD PROBABLE D-GALACTARATE DEHYDRATASE (D-GALACTARATE DEHYDROGENASE) PROTEIN RSp0830 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 17548829 Common paaE PROBABLE FERREDOXIN REDUCTASE PROTEIN RSp0608 146 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 17549620 Common cheZ1 chemotaxis regulator CheZ RSp1401 44 COG3143 CheZ, Chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548882 Common RSp0661 hypothetical protein RS01788 78 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 17548814 Pathogen RSp0593 hypothetical protein RS03887 2 None None None 17548820 Common RSp0599 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS03880 38 None None None 17549863 Common RSp1644 PROBABLE TRANSCRIPTION REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02203 40 COG1846 MarR, Transcriptional regulators Transcription 17549783 Common coxM PROBABLE CYTOCHROME C OXIDASE POLYPEPTIDE II (CYTOCHROME BB3 SUBUNIT 2) TRANSMEMBRANE PROTEIN RSp1564 135 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 17549603 Pathogen RSp1384 PUTATIVE TRANSMEMBRANE PROTEIN RS02074 1 None None None 17548887 Common tag PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE I PROTEIN RSp0666 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 17548947 Pathogen RSp0726 PUTATIVE MFS TRANSPORTER TRANSMEMBRANE PROTEIN RS01724 1 None None None 17549253 Common RSp1032 hypothetical protein RS02369 31 COG4307 COG4307, Uncharacterized protein conserved in bacteria Function unknown 17548611 Common fliF PROBABLE FLAGELLAR M-RING TRANSMEMBRANE PROTEIN RSp0390 127 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 17549191 Common RSp0970 PROBABLE PROTEASE PROTEIN RS02301 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 17548740 Common RSp0519 hypothetical protein RS00398 168 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 17549118 Common RSp0897 PROBABLE SIGNAL PEPTIDE PROTEIN RS01668 1 None None None 17548806 Pathogen RSp0585 truncated TIS1421-transposase protein A RS03895 1 None None None 17548871 Common mmsA PROBABLE METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RSp0650 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17548535 Common RSp0314 PROBABLE TWO COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS05454 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549578 Common RSp1359 PUTATIVE EFFLUX PUMP ANTIBIOTIC RESISTANCE TRANSMEMBRANE PROTEIN RS04823 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549469 Common RSp1248 PROBABLE LIPOPROTEIN SIGNAL PEPTIDE RS03192 51 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 17548382 Common RSp0161 PUTATIVE TRANSMEMBRANE PROTEIN RS05517 14 COG4287 PqaA, PhoPQ-activated pathogenicity-related protein General function prediction only 17549396 Common RSp1175 hypothetical protein RS05065 39 COG3360 COG3360, Uncharacterized conserved protein Function unknown 17548951 Common RSp0730 PROBABLE TRANSMEMBRANE PROTEIN RS01698 74 COG3000 ERG3, Sterol desaturase Lipid metabolism 17549279 Common adc acetoacetate decarboxylase RSp1058 18 COG4689 Adc, Acetoacetate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 17549027 Common RSp0806 PROBABLE TRANSMEMBRANE PROTEIN RS01901 26 COG4539 COG4539, Predicted membrane protein Function unknown 17549618 Common RSp1399 PROBABLE PORIN SIGNAL PEPTIDE PROTEIN RS02059 21 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 17548975 Pathogen RSp0754 hypothetical protein RS01954 2 None None None 17548375 Pathogen RSp0154 PUTATIVE TRANSMEMBRANE PROTEIN RS06009 1 None None None 17548792 Common RSp0571 hypothetical protein RS06031 19 None None None 17548595 Common fliQ flagellar biosynthesis protein FliQ RSp0374 128 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 17548959 Common RSp0738 PUTATIVE VGR-RELATED PROTEIN RS01970 48 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17548472 Common feoB PROBABLE FERROUS IRON TRANSPORT B TRANSMEMBRANE PROTEIN RSp0251 155 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 17549564 Common RSp1345 hypothetical protein RS04774 85 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 17548737 Common RSp0516 hypothetical protein RS00395 4 None None None 17549823 Pathogen RSp1604 hypothetical protein RS02161 1 None None None 17549250 Pathogen RSp1029 PUTATIVE TRANSMEMBRANE ACYL-COA DESATURASE (FATTY ACID DESATURASE) OXIDOREDUCTASE PROTEIN RS02366 1 COG3239 DesA, Fatty acid desaturase Lipid metabolism 17548359 Common pme PECTINESTERASE (PECTIN METHYLESTERASE) TRANSMEMBRANE PROTEIN RSp0138 20 COG4677 PemB, Pectin methylesterase Carbohydrate transport and metabolism 17549805 Pathogen RSp1586 hypothetical protein RS02145 1 None None None 17549211 Common tIS1421 TIS1421-transposase protein A RSp0990 71 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548989 Common RSp0768 PUTATIVE VGR-RELATED PROTEIN RS01940 53 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17549706 Common cmcH PROBABLE 3'-HYDROXYMETHYLCEPHEM-O-CARBAMOYLTRANSFERASE PROTEIN RSp1487 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 17549501 Common RSp1282 PROBABLE MULTIFUNCTIONAL PROTEIN : PHOSPHOCARRIER PROTEIN HPR (PROTEIN H) AND PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE RS05327 230 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 17548303 Pathogen RSp0082 hypothetical protein RS05556 1 None None None 17549439 Pathogen RSp1218 hypothetical protein RS03162 1 None None None 17548634 Common RSp0413 hypothetical protein RS00870 7 COG1475 Spo0J, Predicted transcriptional regulators Transcription 17549100 Pathogen RSp0879 hypothetical protein RS01650 1 COG5373 COG5373, Predicted membrane protein Function unknown 17548940 Common RSp0719 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS01730 19 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 17548619 Common RSp0398 PUTATIVE TRANSMEMBRANE PROTEIN RS00826 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 17549125 Common RSp0904 PUTATIVE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS01675 76 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 17548589 Common RSp0368 hypothetical protein RS00790 26 COG4648 COG4648, Predicted membrane protein Function unknown 17548993 Common RSp0772 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS01936 4 None None None 17548517 Common RSp0296 hypothetical protein RS05479 7 None None None 17548350 Pathogen RSp0129 hypothetical protein RS02991 1 None None None 17549272 Common RSp1051 hypothetical protein RS02388 178 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 17549430 Common RSp1209 PUTATIVE METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER TRANSMEMBRANE PROTEIN RS03153 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17549799 Pathogen RSp1580 PROBABLE TRANSMEMBRANE PROTEIN RS02136 1 None None None 17549535 Common RSp1316 PROBABLE 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE OXIDOREDUCTASE PROTEIN RS05661 76 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 17548347 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp0126 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17549170 Common pntAa2 PROBABLE NAD(P) TRANSHYDROGENASE (ALPHA SUBUNIT PART 1) OXIDOREDUCTASE PROTEIN RSp0949 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 17549889 Pathogen RSp1670 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS02229 1 None None None 17549095 Common hrcC HRP CONSERVED HRCC TRANSMEMBRANE PROTEIN RSp0874 130 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 17548494 Common RSp0273 glutamate carboxypeptidase RS03691 157 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 17549681 Common RSp1462 hypothetical protein RS03082 21 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548529 Common RSp0308 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05463 151 COG0583 LysR, Transcriptional regulator Transcription 17548420 Common RSp0199 PROBABLE TRANSMEMBRANE PROTEIN RS04712 15 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 17548541 Common RSp0320 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05447 136 COG0789 SoxR, Predicted transcriptional regulators Transcription 17549854 Common xylH PROBABLE XYLOSE TRANSMEMBRANE ABC TRANSPORTER PROTEIN RSp1635 112 COG4214 XylH, ABC-type xylose transport system, permease component Carbohydrate transport and metabolism 17548934 Common RSp0713 hypothetical protein RS01736 19 COG0456 RimI, Acetyltransferases General function prediction only 17548551 Common acnA3 aconitate hydratase RSp0330 219 COG1048 AcnA, Aconitase A Energy production and conversion 17549177 Common RSp0956 hypothetical protein RS02287 3 None None None 17548671 Common tISRso5- REMNANT OF ISRSO5-TRANSPOSASE PROTEIN RSp0450 41 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548659 Common RSp0438 PUTATIVE HYDROLASE PROTEIN RS00897 112 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 17548582 Common RSp0361 3-oxoacyl-(acyl carrier protein) synthase I RS00773 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17548837 Common cobA cob(I)yrinic acid a,c-diamide adenosyltransferase RSp0616 141 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 17548743 Common RSp0522 hypothetical protein RS00401 5 None None None 17548655 Common RSp0434 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00893 147 COG0583 LysR, Transcriptional regulator Transcription 17548713 Common czcB PROBABLE COBALT-ZINC-CADMIUM RESISTANCE (CATION EFFLUX SYSTEM PROTEIN) TRANSMEMBRANE RSp0492 91 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17548317 Common RSp0096 PUTATIVE RHS-RELATED PROTEIN RS05526 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548697 Common RSp0476 PUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN RS00354 62 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17548469 Common RSp0248 hypothetical protein RS03718 1 None None None 17549762 Pathogen RSp1543 hypothetical protein RS02099 2 None None None 17548601 Common RSp0380 hypothetical protein RS00808 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 17548570 Common flgI flagellar basal body P-ring protein RSp0349 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 17549075 Pathogen hrpZ PROBABLE HRPY-RELATED PROTEIN RSp0854 1 None None None 17548569 Common flgH PROBABLE FLAGELLAR L-RING PROTEIN PRECURSOR RSp0348 97 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 17549107 Common glnA2 PROBABLE GLUTAMINE SYNTHETASE PROTEIN RSp0886 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 17548801 Common RSp0580 PROBABLE PRODUCT OF A TRUNCATED BACTERIOPHAGE GENE PROTEIN RS03899 11 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 17549353 Common RSp1132 hypothetical protein RS05487 8 None None None 17549748 Common RSp1529 PROBABLE 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE (ACC OXIDASE) OXIDOREDUCTASE PROTEIN RS04806 31 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 17548263 Common TIS1421b TIS1421-transposase protein B RSp0042 27 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17549508 Common RSp1289 PUTATIVE TYPE-4 FIMBRIAL BIOGENESIS TRANSMEMBRANE PROTEIN RS05334 2 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 17548275 Common RSp0054 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02029 112 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 17548538 Common RSp0317 hypothetical protein RS05451 22 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 17549549 Pathogen RSp1330 hypothetical protein RS05650 1 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 17549135 Common RSp0914 GALA PROTEIN 1 RS01686 7 COG5238 RNA1, Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport Signal transduction mechanisms / RNA processing and modification 17548860 Common RSp0639 hypothetical protein RS03728 20 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 17549006 Pathogen RSp0785 hypothetical protein RS01922 1 None None None 17548222 Common repA PROBABLE REPA REPLICASE PROTEIN RSp0001 20 None None None 17548348 Common tISRso1 ISRSO1 TRANSPOSASE PROTEIN RSp0127 59 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549152 Common RSp0931 PROBABLE AMINO-ACID-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN RS05402 172 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 17548762 Pathogen RSp0541 hypothetical protein RS05801 1 None None None 17548608 Common RSp0387 hypothetical protein RS00815 107 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 17549326 Common otsA PROBABLE ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE PROTEIN RSp1105 97 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 17549751 Common RSp1532 PROBABLE LIPOPROTEIN RS04809 9 None None None 17548983 Common RSp0762 hypothetical protein RS01946 10 COG3913 SciT, Uncharacterized protein conserved in bacteria Function unknown 17548928 Common RSp0707 PROBABLE AMINO-ACID COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS01742 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 17549713 Pathogen RSp1494 hypothetical protein RS03050 1 None None None 17549758 Common RSp1539 PROBABLE HEMAGGLUTININ-RELATED PROTEIN RS05770 144 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 17549332 Common RSp1111 PROBABLE LIPASE PROTEIN RS02619 99 COG0657 Aes, Esterase/lipase Lipid metabolism 17548545 Common RSp0324 PROBABLE DEHYDROGENASE, SMALL CHAIN OXIDOREDUCTASE PROTEIN RS05442 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 17549523 Pathogen RSp1304 hypothetical protein RS05976 1 None None None 17549773 Common RSp1554 PROBABLE TWO-COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02110 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549584 Common RSp1365 hypothetical protein RS02093 29 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 17548694 Pathogen RSp0473 hypothetical protein RS00351 1 None None None 17549485 Pathogen RSp1266 PROBABLE TRANSMEMBRANE PROTEIN RS05311 1 None None None 17548779 Common tISRso16b ISRSO16-TRANSPOSASE ORFB PROTEIN RSp0558 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548878 Common copB PROBABLE COPPER RESISTANCE PROTEIN B RSp0657 41 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 17548499 Common RSp0278 hypothetical protein RS03686 4 None None None 17549711 Common RSp1492 hypothetical protein RS03051 9 None None None 17549692 Common RSp1473 PUTATIVE OXIDOREDUCTASE PROTEIN RS03071 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 17548770 Common RSp0549 PROBABLE TRANSMEMBRANE PROTEIN RS03931 3 None None None 17548477 Pathogen RSp0256 hypothetical protein RS03710 1 None None None 17549870 Common RSp1651 RNA polymerase sigma factor RS02210 8 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 17549008 Common RSp0787 PUTATIVE TRANSMEMBRANE PROTEIN RS01920 209 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17549553 Pathogen RSp1334 hypothetical protein RS06036 1 None None None 17548331 Common RSp0110 hypothetical protein RS03012 38 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 17549417 Common RSp1196 PROBABLE TWO COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS03140 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549813 Common RSp1594 PROBABLE PORIN SIGNAL PEPTIDE PROTEIN RS02151 26 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 17549147 Common RSp0926 PUTATIVE OUTER MEMBRANE CATION EFFLUX PROTEIN RS05407 41 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17549084 Common hrcV HRP CONSERVED HRCV TRANSMEMBRANE PROTEIN RSp0863 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 17549764 Common RSp1545 PUTATIVE HEMAGGLUTININ-RELATED PROTEIN RS02101 81 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 17548256 Common RSp0035 enoyl-CoA hydratase RS02010 164 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 17549727 Common RSp1508 PROBABLE TRANSMEMBRANEE ABC TRANSPORTER PROTEIN RS03033 128 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 17548404 Common RSp0183 PUTATIVE HEMAGGLUTININ-RELATED PROTEIN RS04695 66 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 17549788 Pathogen RSp1569 PUTATIVE LIPOPROTEIN TRANSMEMBRANE RS02125 1 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 17548668 Common RSp0447 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00906 165 COG0583 LysR, Transcriptional regulator Transcription 17548338 Pathogen RSp0117 hypothetical protein RS03005 1 None None None 17549331 Common RSp1110 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS02618 171 COG0583 LysR, Transcriptional regulator Transcription 17549882 Pathogen RSp1663 hypothetical protein RS02222 1 None None None 17548673 Common tISRso6b transposase/IS protein RSp0452 91 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 17548470 Common RSp0249 hypothetical protein RS03717 4 None None None 17549638 Common RSp1419 PUTATIVE PEPTIDE SYNTHASE PROTEIN RS03122 220 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17549220 Pathogen RSp0999 hypothetical protein RS02332 1 None None None 17549629 Common motB flagellar motor protein MotB RSp1410 98 COG1360 MotB, Flagellar motor protein Cell motility and secretion 17549080 Pathogen hrcS HRP CONSERVED HRCS TRANSMEMBRANE PROTEIN RSp0859 4 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 17549495 Common RSp1276 PROBABLE ATP-DEPENDENT DNA HELICASE II PROTEIN RS05321 229 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 17549292 Common RSp1071 PUTATIVE HEMAGGLUTININ-RELATED PROTEIN RS02473 24 None None None 17549341 Common RSp1120 hypothetical protein RS05499 71 COG2030 MaoC, Acyl dehydratase Lipid metabolism 17549516 Common RSp1297 PROBABLE TRANSMEMBRANE PROTEIN RS05342 27 COG3766 COG3766, Predicted membrane protein Function unknown 17549426 Common RSp1205 hypothetical protein RS03149 4 COG5581 COG5581, Predicted glycosyltransferase Cell envelope biogenesis, outer membrane 17549054 Common pehC POLYGALACTURONASE TRANSMEMBRANE PROTEIN RSp0833 24 COG5434 PGU1, Endopygalactorunase Cell envelope biogenesis, outer membrane 17548395 Common RSp0174 PROBABLE METHYLTRANSFERASE PROTEIN RS04686 143 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 17549879 Pathogen RSp1660 hypothetical protein RS02219 1 None None None 17548451 Common RSp0230 3-alpha-hydroxysteroid dehydrogenase RS05193 182 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17549196 Common narH PROBABLE RESPIRATORY NITRATE REDUCTASE OXIDOREDUCTASE PROTEIN RSp0975 149 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 17549386 Common RSp1165 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS05642 3 None None None 17549019 Common RSp0798 hypothetical protein RS01909 24 COG4544 COG4544, Uncharacterized conserved protein Function unknown 17548248 Common mntH PUTATIVE MANGANESE TRANSPORT TRANSMEMBRANE PROTEIN RSp0027 91 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 17548244 Common RSp0023 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS01997 6 None None None 17548684 Pathogen RSp0463 hypothetical protein RS00951 1 None None None 17549407 Common RSp1186 hypothetical protein RS03130 83 COG1737 RpiR, Transcriptional regulators Transcription 17549288 Pathogen RSp1067 hypothetical protein RS06033 1 None None None 17549372 Common RSp1151 hypothetical protein RS05436 3 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 17549097 Pathogen popB POPB PROTEIN RSp0876 1 None None None 17549836 Common RSp1617 hypothetical protein RS02174 17 COG1475 Spo0J, Predicted transcriptional regulators Transcription 17549297 Common RSp1076 PUTATIVE GLUCOSE-FRUCTOSE OXIDOREDUCTASE OXIDOREDUCTASE PROTEIN RS02580 181 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 17548790 Pathogen RSp0569 hypothetical protein RS03909 1 None None None 17549573 Pathogen RSp1354 hypothetical protein RS04818 1 None None None 17549881 Common prfC peptide chain release factor 3 RSp1662 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 17548865 Pathogen RSp0644 PUTATIVE SIGNAL PEPTIDE PROTEIN RS05578 1 None None None 17548678 Common RSp0457 PROBABLE RHS-RELATED PROTEIN RS00943 56 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549437 Common tIsRso14a ISRSO14-TRANSPOSASE ORFA PROTEIN RSp1216 54 None None None 17549067 Pathogen RSp0846 AWR FAMILY PROTEIN RS05350 3 None None None 17549164 Common aatA2 aspartate aminotransferase RSp0943 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 17549724 Common norB PROBABLE NITRIC OXIDE REDUCTASE (SUBUNIT B) TRANSMEMBRANE PROTEIN RSp1505 80 COG3256 NorB, Nitric oxide reductase large subunit Inorganic ion transport and metabolism 17548465 Common RSp0244 PROBABLE OUTER MEMBRANE HEMIN RECEPTOR SIGNAL PEPTIDE PROTEIN RS03722 123 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 17549047 Common RSp0826 5-dehydro-4-deoxyglucarate dehydratase RS05369 224 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 17548908 Common RSp0687 PUTATIVE ACYL-COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS01762 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 17549519 Common tISRso13 ISRSO13-TRANSPOSASE PROTEIN RSp1300 4 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 17549425 Pathogen RSp1204 hypothetical protein RS03148 1 None None None 17549510 Common pilV PUTATIVE TYPE-4 FIMBRIAL BIOGENESIS PILV TRANSMEMBRANE PROTEIN RSp1291 17 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 17549218 Common RSp0997 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS02329 164 COG0583 LysR, Transcriptional regulator Transcription 17549732 Common RSp1513 hypothetical protein RS04790 41 COG4125 COG4125, Predicted membrane protein Function unknown 17549314 Common RSp1093 PUTATIVE HEMAGGLUTININ-RELATED TRANSMEMBRANE PROTEIN RS02599 5 None None None 17549010 Common RSp0789 hypothetical protein RS01918 9 None None None 17548385 Common RSp0164 PROBABLE TRANSMEMBRANE PROTEIN RS05514 78 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 17548827 Common paaC PROBABLE PHENYLACETIC ACID DEGRADATION PROTEIN RSp0606 42 COG3396 COG3396, Uncharacterized conserved protein Function unknown 17548640 Common RSp0419 PUTATIVE SIDEROPHORE BIOSYNTHESIS PROTEIN RS00876 31 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 17549359 Common RSp1138 hypothetical protein RS05481 8 COG5435 COG5435, Uncharacterized conserved protein Function unknown 17548232 Pathogen RSp0011 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS01983 1 None None None 17548417 Common RSp0196 PROBABLE PROLYL AMINOPEPTIDASE PROTEIN RS04709 104 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17549455 Common RSp1234 PUTATIVE TRANSFERASE PROTEIN RS03178 64 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 17549070 Common prhI RNA polymerase sigma factor RSp0849 38 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 17549893 Pathogen RSp1674 hypothetical protein RS02233 1 None None None 17549268 Common RSp1047 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN RS02384 84 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 17549781 Common RSp1562 hypothetical protein RS02118 2 None None None 17549687 Common RSp1468 PUTATIVE SIGNAL PEPTIDE PROTEIN RS03076 28 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 17549284 Pathogen RSp1063 PROBABLE SIGNAL PEPTIDE PROTEIN RS02470 1 None None None 17549808 Pathogen RSp1589 hypothetical protein RS02146 1 None None None 17548281 Common eftA PUTATIVE ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) RSp0060 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 17548754 Pathogen RSp0533 hypothetical protein RS00413 1 None None None 17548322 Pathogen RSp0101 hypothetical protein RS03022 2 None None None 17548367 Common RSp0146 PROBABLE TRANSMEMBRANE PROTEIN RS02974 7 None None None 17548624 Common RSp0403 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS00831 1 None None None 17548647 Common RSp0426 hypothetical protein RS00883 29 COG3247 HdeD, Uncharacterized conserved protein Function unknown 17548260 Common RSp0039 hypothetical protein RS02014 87 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17549811 Common livK PROBABLE LEUCINE-SPECIFIC BINDING PRECURSOR TRANSMEMBRANE PROTEIN RSp1592 136 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 17548294 Pathogen RSp0073 PROBABLE REMNANT OF A TRANSPOSASE GENE PROTEIN RS05558 1 None None None 17548251 Common RSp0030 PROBABLE OXACILLIN HYDROLASE (CLASS-D BETA-LACTAMASE) SIGNAL PEPTIDE PROTEIN RS02005 37 COG2602 COG2602, Beta-lactamase class D Defense mechanisms 17548573 Common flgL PROBABLE FLAGELLAR HOOK-ASSOCIATED PROTEIN 3 RSp0352 69 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 17549228 Common RSp1007 PUTATIVE ACETYL TRANSFERASE PROTEIN RS02341 68 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 17549339 Common RSp1118 hypothetical protein RS05501 15 COG4954 COG4954, Uncharacterized protein conserved in bacteria Function unknown 17549499 Common RSp1280 PROBABLE SUGAR KINASE PROTEIN RS05325 128 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 17549790 Common RSp1571 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02127 176 COG0583 LysR, Transcriptional regulator Transcription 17548765 Pathogen RSp0544 hypothetical protein RS03936 2 None None None 17549062 Common RSp0841 PUTATIVE LIPOPROTEIN RS05356 33 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 17548650 Common RSp0429 PROBABLE MULTIDRUG TRANSPORT TRANSMEMBRANE PROTEIN RS00888 44 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549381 Common RSp1160 PROBABLE LIPOPROTEIN SIGNAL PEPTIDE RS05425 6 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 17549232 Common RSp1011 PROBABLE TRANSMEMBRANE PROTEIN RS02345 203 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 17549479 Pathogen RSp1260 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS05305 1 None None None 17548233 Common RSp0012 PROBABLE TRANSMEMBRANE PROTEIN RS01984 183 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 17548788 Common tISRsob ISRSO10-TRANSPOSASE ORFB PROTEIN RSp0567 69 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548985 Common RSp0764 PROBABLE TRANSMEMBRANE PROTEIN RS01944 3 None None None 17549181 Common RSp0960 PUTATIVE OXIDOREDUCTASE PROTEIN RS02291 173 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 17548463 Common glgA glycogen synthase RSp0242 149 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 17549206 Common RSp0985 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN RS02317 130 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 17549368 Common RSp1147 PUTATIVE TRANSMEMEMBRANE REDUCTASE OXIDOREDUCTASE PROTEIN RS05455 77 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 17548505 Pathogen RSp0284 PROBABLE TRANSMEMBRANE PROTEIN RS03680 1 None None None 17548631 Common RSp0410 PROBABLE TRANSMEMBRANE PROTEIN RS00867 39 COG4291 COG4291, Predicted membrane protein Function unknown 17549330 Common RSp1109 hypothetical protein RS02617 33 COG1656 COG1656, Uncharacterized conserved protein Function unknown 17549361 Common RSp1140 PROBABLE SUBSTRATE-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN RS05478 159 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 17549073 Common hrpG RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RSp0852 204 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549871 Common RSp1652 hypothetical protein RS02211 42 COG1409 Icc, Predicted phosphohydrolases General function prediction only 17548893 Common RSp0672 HYPOTHETICAL GALA PROTEIN RS01777 8 COG5238 RNA1, Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport Signal transduction mechanisms / RNA processing and modification 17548802 Common TIS1421a IS1421-transposase protein A RSp0581 71 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549840 Common rcsB PROBABLE CAPSULAR SYNTHESIS RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RSp1621 168 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17548544 Common RSp0323 hypothetical protein RS05444 5 None None None 17548781 Pathogen RSp0560 hypothetical protein RS03918 1 None None None 17549494 Common RSp1275 hypothetical protein RS05320 39 COG1742 COG1742, Uncharacterized conserved protein Function unknown 17548749 Common RSp0528 PUTATIVE OUTER MEMBRANE CATION EFFLUX SYSTEM PROTEIN RS00407 53 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17549745 Common RSp1526 hypothetical protein RS04803 11 None None None 17549667 Common pykA2 pyruvate kinase RSp1448 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 17548682 Common tISRso10a ISRSO10-TRANSPOSASE ORFA PROTEIN RSp0461 38 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549472 Common RSp1251 PROBABLE SIGNAL PEPTIDE PROTEIN RS03196 6 None None None 17549571 Common RSp1352 PROBABLE TRANSMEMBRANE PROTEIN RS04781 113 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 17548255 Common RSp0034 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02009 77 COG1846 MarR, Transcriptional regulators Transcription 17548377 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp0156 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17549641 Common RSp1422 PUTATIVE PEPTIDE SYNTHETASE PROTEIN RS03120 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 17549470 Common RSp1249 hypothetical protein RS03193 21 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 17549158 Pathogen RSp0937 PUTATIVE BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE RS05396 1 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 17549320 Common RSp1099 PUTATIVE METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER TRANSMEMBRANE PROTEIN RS02605 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17549148 Common RSp0927 PUTATIVE CATION EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RS05406 168 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17548636 Common RSp0415 PROBABLE EXTRACYTOPLASMIC FUNCTION SIGMA FACTOR TRANSCRIPTION REGULATOR PROTEIN RS00872 43 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 17549106 Pathogen RSp0885 hypothetical protein RS01656 2 None None None 17549663 Common RSp1444 PUTATIVE HEMAGGLUTININ-RELATED PROTEIN RS03099 58 None None None 17549137 Common RSp0916 PROBABLE LIPOPROTEIN RS01688 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 17548513 Common cyaB PROBABLE CYCLOLYSIN-TYPE SECRETION COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEIN RSp0292 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 17548907 Common RSp0686 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01763 75 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 17549160 Common RSp0939 hypothetical protein RS05394 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 17548305 Pathogen RSp0084 hypothetical protein RS05553 1 None None None 17548436 Common RSp0215 hypothetical protein RS05212 5 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 17548714 Common czcA PROBABLE CATION EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RSp0493 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 17548337 Common RSp0116 PUTATIVE LIPOPROTEIN RS03006 8 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 17548471 Common RSp0250 PUTATIVE TRANSMEMBRANE PROTEIN RS03716 1 None None None 17548426 Common RSp0205 hypothetical protein RS05223 3 None None None 17548666 Common RSp0445 PROBABLE NADH-DEPENDENT FLAVIN OXIDOREDUCTASE OXIDOREDUCTASE PROTEIN RS00904 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 17548580 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase RSp0359 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17549533 Common RSp1314 hypothetical protein RS05663 85 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 17549004 Pathogen RSp0783 hypothetical protein RS01924 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17549172 Common pntB2a PROBABLE NAD(P) TRANSHYDROGENASE SUBUNIT BETA (PART 1) TRANSMEMBRANE PROTEIN RSp0951 122 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 17549375 Common RSp1154 PROBABLE TRANSMEMBRANE PROTEIN RS05433 4 None None None 17549869 Common RSp1650 PUTATIVE TRANSMEMBRANE PROTEIN RS02209 13 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 17548960 Common RSp0739 PROBABLE TRANSMEMBRANE PROTEIN RS01969 47 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 17548967 Common RSp0746 hypothetical protein RS01962 27 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 17548931 Common RSp0710 PROBABLE TRANSMEMBRANE PROTEIN RS01739 29 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 17549861 Common RSp1642 PROBABLE TRANSMEMBRANE PROTEIN RS02200 34 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 17549654 Pathogen RSp1435 PUTATIVE TRANSMEMBRANE PROTEIN RS03107 1 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 17548852 Common RSp0631 PROBABLE LIPOPROTEIN RS03736 26 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 17549746 Common RSp1527 PROBABLE TRANSMEMBRANE PROTEIN RS04804 9 None None None 17548735 Common RSp0514 PROBABLE TRANSMEMBRANE PROTEIN RS00392 181 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 17549715 Common RSp1496 PROBABLE CATION-EFFLUX SYSTEM TRANSMEMBRANE PROTEIN RS03045 191 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 17549123 Common RSp0902 PUTATIVE INTEGRASE/RECOMBINASE PROTEIN RS01673 200 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 17549255 Common RSp1034 PROBABLE SIGNAL PEPTIDE PROTEIN RS02371 31 COG5572 COG5572, Predicted integral membrane protein Function unknown 17548557 Common RSp0336 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00713 89 COG2188 PhnF, Transcriptional regulators Transcription 17549463 Common RSp1242 PUTATIVE TRANSMEMBRANE CYTOCHROME BD-II OXIDASE (SUBUNIT I) OXIDOREDUCTASE PROTEIN RS03186 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 17548542 Common RSp0321 PROBABLE CYSTEINE-RICH PROTEIN RS05446 9 None None None 17548939 Common RSp0718 PROBABLE LIPOPROTEIN RS01731 94 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 17548467 Common ahpF PROBABLE ALKYL HYDROPEROXIDE REDUCTASE (SUBUNIT F) OXIDOREDUCTASE PROTEIN RSp0246 247 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 17549622 Common cheB chemotaxis-specific methylesterase RSp1403 210 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 17549274 Common cspD2 PROBABLE COLD SHOCK-LIKE TRANSCRIPTION REGULATOR PROTEIN RSp1053 182 COG1278 CspC, Cold shock proteins Transcription 17548587 Common RSp0366 hypothetical protein RS00785 113 COG4261 COG4261, Predicted acyltransferase General function prediction only 17549566 Common RSp1347 PROBABLE 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE OXIDOREDUCTASE PROTEIN RS04776 76 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 17548886 Common RSp0665 PROBABLE MAGNESIUM AND COBALT TRANSPORT TRANSMEMBRANE PROTEIN RS01784 161 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 17548643 Common RSp0422 PROBABLE SIDEROPHORE BIOSYNTHESIS PROTEIN RS00879 49 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 17548957 Common RSp0736 PUTATIVE TRANSMEMBRANE PROTEIN RS01973 3 None None None 17548795 Pathogen RSp0574 hypothetical protein RS03905 1 None None None 17549651 Common RSp1432 hypothetical protein RS03110 6 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 17549252 Common RSp1031 PROBABLE TRANSMEMBRANE PROTEIN RS02368 2 None None None 17549315 Common RSp1094 PUTATIVE HEMAGGLUTININ-RELATED TRANSMEMBRANE PROTEIN RS02600 8 None None None 17549551 Common tISRso1 ISRSO1-TRANSPOSASE PROTEIN RSp1332 59 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548613 Common fliH flagellar assembly protein H RSp0392 64 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 17549558 Common RSp1339 PUTATIVE TRANSMEMBRANE PROTEIN RS04764 118 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 17549677 Common RSp1458 PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN RS03086 179 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17549605 Pathogen RSp1386 PUTATIVE LIPOPROTEIN RS02072 1 COG3134 COG3134, Predicted outer membrane lipoprotein Function unknown 17548431 Pathogen RSp0210 hypothetical protein RS05216 1 None None None 17549593 Common RSp1374 hypothetical protein RS02084 5 None None None 17548597 Common fliO PROBABLE FLAGELLAR FLIO TRANSMEMBRANE PROTEIN RSp0376 34 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 17549024 Common RSp0803 PROBABLE SIGNAL PEPTIDE PROTEIN RS01904 134 None None None 17548552 Common RSp0331 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS00705 24 COG1802 GntR, Transcriptional regulators Transcription 17549506 Common pilE1 PROBABLE TYPE 4 FIMBRIAL BIOGENESIS SIGNAL PEPTIDE PROTEIN RSp1287 37 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 17548357 Common RSp0136 PUTATIVE NADH OXIDASE-RELATED OXIDOREDUCTASE PROTEIN RS02984 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 17549243 Pathogen RSp1022 hypothetical protein RS02359 2 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 17549447 Pathogen RSp1226 hypothetical protein RS03170 1 None None None 17548808 Common RSp0587 PUTATIVE SIGNAL PEPTIDE PROTEIN RS03893 20 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 17549821 Pathogen RSp1602 hypothetical protein RS02159 1 None None None 17549117 Common RSp0896 PUTATIVE 4-HYDROXYBENZOATE TRANSPORTER TRANSMEMBRANE PROTEIN RS01667 144 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548402 Common RSp0181 hypothetical protein RS04693 25 COG3832 COG3832, Uncharacterized conserved protein Function unknown 17548318 Common RSp0097 PROBABLE ANKYRIN-REPEAT HARBORING PROTEIN RS05527 37 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 17548340 Common RSp0119 hypothetical protein RS03003 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 17549884 Pathogen RSp1665 hypothetical protein RS02224 1 None None None 17549145 Pathogen RSp0924 hypothetical protein RS05410 1 None None None 17549428 Common RSp1207 PUTATIVE TRANSMEMBRANE CYTOCHROME BD-II OXIDASE (SUBUNIT I) OXIDOREDUCTASE PROTEIN RS03151 164 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 17549834 Common uxaA PUTATIVE ALTRONATE HYDROLASE (ALTRONIC ACID HYDRATASE) PROTEIN RSp1615 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 17548900 Common RSp0679 PUTATIVE DIAMINOPIMELATE DECARBOXYLASE PROTEIN RS01770 65 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 17548283 Common RSp0062 PUTATIVE DIOXYGENASE (ALPHA SUBUNIT) OXIDOREDUCTASE PROTEIN RS02037 86 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 17549782 Common RSp1563 hypothetical protein RS02119 9 None None None 17548254 Common RSp0033 PROBABLE OXIDOREDUCTASE PROTEIN RS02008 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 17549807 Common RSp1588 PROBABLE REMNANT OF A TRANSPOSASE GENE PROTEIN RS02142 61 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 17549404 Common RSp1183 PUTATIVE HEMOLYSIN-TYPE SECRETION TRANSMEMBRANE PROTEIN RS05073 120 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 17548428 Common RSp0207 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS05221 1 None None None 17549707 Pathogen RSp1488 hypothetical protein RS03055 1 None None None 17548374 Pathogen RSp0153 hypothetical protein RS06008 1 None None None 17549451 Common RSp1230 hypothetical protein RS03174 41 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 17548242 Pathogen RSp0021 hypothetical protein RS01993 1 None None None 17548718 Pathogen RSp0497 hypothetical protein RS00375 2 None None None 17549052 Common RSp0831 hypothetical protein RS05364 82 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 17549438 Common tISRso14b ISRSO14-TRANSPOSASE ORFB PROTEIN RSp1217 115 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548368 Pathogen RSp0147 hypothetical protein RS02973 1 None None None 17549731 Common RSp1512 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS04789 10 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 17549354 Pathogen RSp1133 hypothetical protein RS05510 3 None None None 17549700 Common RSp1481 PROBABLE TRANSMEMBRANE PROTEIN RS03062 33 None None None 17549110 Common RSp0889 PROBABLE DECARBOXYLASE PROTEIN RS01660 6 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 17549856 Common RSp1637 PROBABLE TRANSCRIPTION REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02195 126 COG1609 PurR, Transcriptional regulators Transcription 17549194 Common narK2 PROBABLE NITRITE/NITRATE TRANSPORTER TRANSMEMBRANE PROTEIN RSp0973 87 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 17549421 Common RSp1200 PUTATIVE OUTER MEMBRANE CHANEL LIPOPROTEIN TRANSMEMBRANE RS03144 106 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548825 Common paaA PROBABLE PHENYLACETIC ACID DEGRADATION PROTEIN RSp0604 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 17548362 Common RSp0141 PUTATIVE GENERAL SECRETION PATHWAY GSPG RELATED TRANSMEMBRANE PROTEIN RS02979 13 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17548866 Common RSp0645 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05577 139 COG1522 Lrp, Transcriptional regulators Transcription 17548578 Common fabB PROBABLE 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I RSp0357 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17548946 Common RSp0725 hypothetical protein RS01723 73 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 17548816 Common RSp0595 hypothetical protein RS03884 26 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 17549176 Common RSp0955 PROBABLE PORIN SIGNAL PEPTIDE PROTEIN RS05376 35 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 17549033 Common RSp0812 PUTATIVE TRANSMEMBRANE PROTEIN RS01895 6 None None None 17549013 Common RSp0792 PUTATIVE FATTY ACID DESATURASE TRANSMEMBRANE PROTEIN RS01915 51 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 17549753 Common RSp1534 PROBABLE SIGNAL PEPTIDE PROTEIN RS04811 83 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 17549367 Common RSp1146 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05458 173 COG0583 LysR, Transcriptional regulator Transcription 17549262 Common RSp1041 PROBABLE CATION TRANSPORTER TRANSMEMBRANE PROTEIN RS02378 169 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17549045 Common RSp0824 PUTATIVE GLUCONOLACTONASE PRECURSOR (D-GLUCONO-DELTA-LACTONE LACTONOHYDROLASE) PROTEIN RS05371 72 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 17548672 Common tISRso6a ISRSO6-TRANSPOSASE ORFA PROTEIN RSp0451 83 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549289 Pathogen RSp1068 hypothetical protein RS02476 1 None None None 17549612 Common flhA PROBABLE FLAGELLAR BIOSYNTHESIS FLHA TRANSMEMBRANE PROTEIN RSp1393 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 17549094 Common hrpB REGULATORY HRPB TRANSCRIPTION REGULATOR PROTEIN RSp0873 34 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 17549415 Common RSp1194 PROBABLE PROLINE RICH TRANSMEMBRANE PROTEIN RS03138 10 COG3042 Hlx, Putative hemolysin General function prediction only 17549453 Common aatA1 PROBABLE ASPARTATE AMINOTRANSFERASE A PROTEIN RSp1232 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 17549348 Common RSp1127 PROBABLE TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS05492 54 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 17549086 Pathogen hrpK HRPK PROTEIN RSp0865 4 None None None 17549328 Common ohr PROBABLE ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN RSp1107 91 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 17548546 Common RSp0325 PROBABLE DEHYDROGENASE, LARGE CHAIN OXIDOREDUCTASE PROTEIN RS05441 78 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 17549712 Pathogen RSp1493 hypothetical protein RS05842 1 None None None 17549064 Common RSp0843 hypothetical protein RS05353 144 COG1733 COG1733, Predicted transcriptional regulators Transcription 17549729 Common RSp1510 hypothetical protein RS03031 16 COG3189 COG3189, Uncharacterized conserved protein Function unknown 17549360 Common RSp1139 PROBABLE VGR-RELATED PROTEIN RS05480 51 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17548970 Common RSp0749 PUTATIVE CLPA/B-TYPE CHAPERONE PROTEIN RS01959 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 17549684 Common RSp1465 PROBABLE TRANSMEMBRANE PROTEIN RS03079 32 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 17549060 Pathogen RSp0839 hypothetical protein RS05562 1 None None None 17548257 Common RSp0036 PROBABLE ACYL-COA DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS02011 157 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 17549020 Common RSp0799 hypothetical protein RS01908 54 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 17548831 Common RSp0610 hypothetical protein RS03757 15 COG4390 COG4390, Uncharacterized protein conserved in bacteria Function unknown 17549520 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp1301 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17549636 Common RSp1417 PROBABLE TRANSMEMBRANE EFFLUX TRANSMEMBRANE PROTEIN RS03124 205 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548759 Pathogen RSp0538 PROBABLE TRANSMEMBRANE PROTEIN RS00417 1 None None None 17549483 Common RSp1264 PROBABLE INTEGRAL MEMBRANE TRANSMEMBRANE PROTEIN RS05309 78 COG0730 COG0730, Predicted permeases General function prediction only 17548453 Common RSp0232 PROBABLE ESTERASE/LIPASE PROTEIN RS05191 122 COG0657 Aes, Esterase/lipase Lipid metabolism 17549204 Common RSp0983 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS02316 25 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17548511 Common RSp0290 PUTATIVE OUTER MEMBRANE CHANEL LIPOPROTEIN RS03674 89 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548516 Common RSp0295 PUTATIVE HEMOLYSIN-TYPE PROTEIN RS03668 99 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 17548393 Common RSp0172 hypothetical protein RS04684 3 None None None 17549816 Common RSp1597 PROBABLE TRANSPORT TRANSMEMBRANE PROTEIN RS02154 178 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17549529 Common RSp1310 hypothetical protein RS05689 24 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 17548927 Common RSp0706 PROBABLE AMINO-ACID COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS01743 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 17548414 Pathogen RSp0193 PUTATIVE PPR REPEATS CONTAINING PROTEIN RS04706 1 None None None 17549189 Common RSp0968 hypothetical protein RS02299 30 COG3154 COG3154, Putative lipid carrier protein Lipid metabolism 17548847 Common cobN PROBABLE COBALAMIN BIOSYNTHESIS PROTEIN RSp0626 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 17548836 Common cobB cobyrinic acid a,c-diamide synthase RSp0615 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 17549694 Pathogen RSp1475 hypothetical protein RS03068 1 None None None 17549847 Common tISRso16b ISRSO16-TRANSPOSASE ORFB PROTEIN RSp1628 131 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549304 Common RSp1083 PUTATIVE TIGHT ADHERENCE TADC RELATED TRANSMEMBRANE PROTEIN RS02590 30 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 17549389 Common RSp1168 hypothetical protein RS05639 21 None None None 17548914 Common RSp0693 hypothetical protein RS01756 32 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 17549766 Common tISRso15 ISRSO15-TRANSPOSASE PROTEIN RSp1547 66 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548292 Pathogen RSp0071 hypothetical protein RS02048 1 None None None 17549007 Common RSp0786 hypothetical protein RS01921 9 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 17548381 Common RSp0160 hypothetical protein RS05518 5 None None None 17549775 Common hexR PUTATIVE TRANSCRIPTION REGULATION REPRESSOR HEXR TRANSCRIPTION REGULATOR PROTEIN RSp1556 78 COG1737 RpiR, Transcriptional regulators Transcription 17548888 Common RSp0667 PUTATIVE CYNX-RELATED TRANSPORT TRANSMEMBRANE PROTEIN RS01782 74 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 17548752 Common RSp0531 PROBABLE P-II-RELATED PROTEIN TRANSCRIPTION REGULATOR RS00410 143 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 17549512 Common RSp1293 PUTATIVE TRANSMEMBRANE PROTEIN RS05338 60 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 17548777 Common RSp0556 hypothetical protein RS03923 28 COG4275 COG4275, Uncharacterized conserved protein Function unknown 17548571 Common flgJ PROBABLE FLAGELLAR PROTEIN FLGJ RSp0350 76 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 17549743 Common RSp1524 PROBABLE TRANSMEMBRANE PROTEIN RS04801 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 17548747 Common RSp0526 hypothetical protein RS00405 96 COG1959 COG1959, Predicted transcriptional regulator Transcription 17548891 Common RSp0670 PROBABLE TRANSPORTER LIPOPROTEIN TRANSMEMBRANE RS01779 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 17548490 Common RSp0269 hypothetical protein RS03695 9 None None None 17549698 Common RSp1479 hypothetical protein RS03064 4 None None None 17548708 Common RSp0487 hypothetical protein RS00365 186 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 17549661 Common RSp1442 PROBABLE TWO-COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS03101 210 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17548228 Common kgtP2 PUTATIVE ALPHA-KETOGLUTARATE PERMEASE TRANSMEMBRANE PROTEIN RSp0007 152 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549248 Common RSp1027 PUTATIVE METHYL-ACCEPTING CHEMOTAXIS TRANSDUCER TRANSMEMBRANE PROTEIN RS02364 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17548944 Pathogen RSp0723 hypothetical protein RS01725 1 None None None 17549504 Common scrA PROBABLE PTS SYSTEM, SUCROSE-SPECIFIC (IIBC COMPONENT) TRANSMEMBRANE PROTEIN RSp1285 45 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 17549858 Common RSp1639 PROBABLE TRANSCRIPTIONAL REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02197 94 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 17548409 Common RSp0188 hypothetical protein RS04700 17 None None None 17549357 Common tISRso18 ISRSO18-TRANSPOSASE PROTEIN RSp1136 39 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17548804 Common RSp0583 PROBABLE EXOGLUCANASE A (1,4-BETA-CELLOBIOSIDASE) PROTEIN RS03897 16 COG5297 CelA, Cellobiohydrolase A (1,4-beta-cellobiosidase A) Carbohydrate transport and metabolism 17549041 Common RSp0820 PUTATIVE HEMAGGLUTININ-RELATED PROTEIN RS01887 86 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 17548972 Pathogen RSp0751 hypothetical protein RS01957 1 None None None 17549755 Common RSp1536 PROBABLE HEMAGGLUTININ-RELATED SIGNAL PEPTIDE PROTEIN RS04813 61 None None None 17549156 Common RSp0935 PROBABLE OXIDOREDUCTASE PROTEIN RS05398 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 17549665 Common cfa1 cyclopropane fatty acyl phospholipid synthase RSp1446 128 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 17549130 Common RSp0909 hypothetical protein RS01681 82 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 17549643 Common ectB diaminobutyrate--2-oxoglutarate aminotransferase RSp1424 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 17549214 Common RSp0993 PROBABLE CYTOCHROME C OXIDASE SUBUNIT TRANSMEMBRANE PROTEIN RS02325 104 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 17548400 Common RSp0179 hypothetical protein RS04691 4 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 17548554 Pathogen osmB2 PUTATIVE OSMOTICALLY INDUCIBLE LIPOPROTEIN B2 TRANSMEMBRANE RSp0333 1 None None None 17549104 Pathogen RSp0883 hypothetical protein RS01654 2 None None None 17548271 Common folB1 PROBABLE DIHYDRONEOPTERIN ALDOLASE PROTEIN RSp0050 2 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 17549540 Common RSp1321 PROBABLE TRANSMEMBRANE PROTEIN RS05656 113 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 17548522 Common TIS1421a TIS1421-transposase protein A RSp0301 27 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17548670 Common RSp0449 PUTATIVE RSH-RELATED PROTEIN RS00908 51 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549022 Common RSp0801 PROBABLE GLYCINE RICH PROTEIN RS01906 5 COG1396 HipB, Predicted transcriptional regulators Transcription 17548716 Pathogen RSp0495 hypothetical protein RS00373 1 None None None 17549598 Common RSp1379 PROBABLE SIGNAL PEPTIDE PROTEIN RS02079 2 None None None 17549577 Common ilvE2 branched-chain amino acid aminotransferase RSp1358 209 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 17549115 Common RSp0894 acetaldehyde dehydrogenase RS01665 37 COG4569 MhpF, Acetaldehyde dehydrogenase (acetylating) Secondary metabolites biosynthesis, transport, and catabolism 17548782 Common RSp0561 hypothetical protein RS03917 4 COG1733 COG1733, Predicted transcriptional regulators Transcription 17549208 Common RSp0987 PROBABLE TRANSMEMBRANE PROTEIN RS02319 9 None None None 17549078 Pathogen hrpW HRPW TRANSMEMBRANE PROTEIN RSp0857 4 None None None 17548604 Common fliD PROBABLE FLAGELLAR HOOK-ASSOCIATED PROTEIN 2 (FILAMENT CAP PROTEIN) RSp0383 163 COG1345 FliD, Flagellar capping protein Cell motility and secretion 17549409 Common RSp1188 hypothetical protein RS03132 146 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 17548312 Pathogen RSp0091 hypothetical protein RS05552 1 None None None 17549400 Common TIS1021 TIS1021 transposase RSp1179 41 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 17548638 Common cysK2 PROBABLE CYSTEINE SYNTHASE A PROTEIN RSp0417 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 17548575 Common RSp0354 PUTATIVE OXIDOREDUCTASE PROTEIN RS00759 41 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 17549792 Common RSp1573 hypothetical protein RS02129 32 COG5476 COG5476, Uncharacterized conserved protein Function unknown 17549337 Common RSp1116 PUTATIVE LOW SPECIFICITY L-THREONINE ALDOLASE PROTEIN RS05504 89 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 17549717 Common RSp1498 PROBABLE SIGNAL PEPTIDE PROTEIN RS03043 37 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 17548287 Common opuA PUTATIVE GLYCINE BETAINE/L-PROLINE ATP-BINDING ABC TRANSPORTER PROTEIN RSp0066 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 17549002 Common metB PUTATIVE CYSTATHIONINE GAMMA-SYNTHASE PROTEIN RSp0781 102 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 17548236 Common RSp0015 PROBABLE AMINO-ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS01987 148 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 17548423 Common RSp0202 hypothetical protein RS05227 20 None None None 17549316 Common RSp1095 PROBABLE ACTIVATION/SECRETION SIGNAL PEPTIDE PROTEIN RS02601 50 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 17548459 Common glgX PROBABLE GLYCOGEN OPERON PROTEIN GLGX RSp0238 142 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 17549465 Common RSp1244 2-dehydropantoate 2-reductase RS03188 95 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 17549121 Common popF2 SECRETED PROTEIN POPF2 RSp0900 4 None None None 17549607 Pathogen RSp1388 hypothetical protein RS02070 1 None None None 17548641 Common RSp0420 PROBABLE MULTIDRUG RESISTANCE 1 TRANSMEMBRANE PROTEIN RS00877 16 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548733 Common RSp0512 hypothetical protein RS00391 11 COG5298 COG5298, Uncharacterized protein conserved in bacteria Function unknown 17548835 Common RSp0614 PROBABLE OXIDOREDUCTASE PROTEIN RS03753 83 COG0778 NfnB, Nitroreductase Energy production and conversion 17548923 Common RSp0702 hypothetical protein RS01747 76 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 17548480 Common pcp2 PROBABLE PYRROLIDONE-CARBOXYLATE PEPTIDASE PROTEIN RSp0259 56 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 17549689 Common RSp1470 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS03074 16 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 17549449 Common RSp1228 PUTATIVE SIGNAL PEPTIDE PROTEIN RS03172 6 None None None 17548995 Pathogen RSp0774 hypothetical protein RS01934 1 None None None 17548561 Common flgM PROBABLE NEGATIVE REGULATOR OF FLAGELLIN SYNTHESIS (ANTI-SIGMA-28 FACTOR) PROTEIN RSp0340 4 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 17548585 Common RSp0364 hypothetical protein RS00778 64 COG0824 FcbC, Predicted thioesterase General function prediction only 17549614 Common RSp1395 PUTATIVE TRANSCRIPTION REGULATOR TRANSCRIPTION REGULATOR PROTEIN RS02063 131 COG1309 AcrR, Transcriptional regulator Transcription 17548354 Common RSp0133 PROBABLE TRANSMEMBRANE PROTEIN RS02987 52 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 17548955 Pathogen RSp0734 hypothetical protein RS05791 1 None None None 17549850 Pathogen RSp1631 PUTATIVE REMNANT OF CYANATE LYASE PROTEIN RS02189 1 None None None 17548487 Common RSp0266 hypothetical protein RS03700 7 COG4861 COG4861, Uncharacterized protein conserved in bacteria Function unknown 17549624 Common cheR PROBABLE CHEMOTAXIS PROTEIN METHYLTRANSFERASE RSp1405 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 17549672 Common RSp1453 PUTATIVE CYTOCHROME C SIGNAL PEPTIDE PROTEIN RS03090 35 COG3258 COG3258, Cytochrome c Energy production and conversion 17549786 Common coxP PROBABLE CYTOCHROME-C OXIDASE SUBUNIT III OXIDOREDUCTASE PROTEIN RSp1567 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 17549392 Pathogen RSp1171 PROBABLE TRANSMEMBRANE PROTEIN RS05061 2 None None None 17548559 Common epsR NEGATIVE REGULATOR OF EXOPOLYSACCHARIDE PRODUCTION TRANSCRIPTION REGULATOR PROTEIN RSp0338 160 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17549441 Common RSp1220 PROBABLE FLAVOPROTEIN FAD OXIDOREDUCTASE RS03164 195 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 17548591 Common RSp0370 PUTATIVE ACYL-CARRIER-PROTEIN RS00794 45 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 17548433 Common RSp0212 PROBABLE DIOXYGENASE SIGNAL PEPTIDE PROTEIN RS05214 35 COG3670 COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 17548797 Common RSp0576 hypothetical protein RS03903 9 None None None 17548599 Common fliM flagellar motor switch protein FliM RSp0378 109 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 17549595 Common RSp1376 hypothetical protein RS02082 107 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 17548531 Common RSp0310 PROBABLE MACROLIDE-EFFLUX TRANSMEMBRANE PROTEIN RS05460 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548225 Common parB PUTATIVE PARTITIONING PROTEIN RSp0004 145 COG1475 Spo0J, Predicted transcriptional regulators Transcription 17549721 Common RSp1502 PROBABLE SIGNAL PEPTIDE PROTEIN RS03039 34 COG1262 COG1262, Uncharacterized conserved protein Function unknown 17548324 Common RSp0103 PUTATIVE VGR-RELATED PROTEIN RS03020 47 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17549226 Common RSp1005 PROBABLE TRANSMEMBRANE PROTEIN RS02338 5 None None None 17548615 Common fliJ PROBABLE FLAGELLAR PROTEIN RSp0394 32 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 17549139 Common RSp0918 PUTATIVE TRANSPOSASE, TRUNCATED PROTEIN RS05419 2 None None None 17549174 Common tISRso6b transposase/IS protein RSp0953 91 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 17548564 Common flgC PROBABLE FLAGELLAR BASAL-BODY ROD PROTEIN FLGC RSp0343 126 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 17548515 Common RSp0294 PUTATIVE HEMOLYSIN-TYPE CALCIUM-BINDING PROTEIN RS03672 82 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 17548723 Pathogen RSp0502 hypothetical protein RS06030 1 None None None 17548524 Common cheD2 PROBABLE METHYL-ACCEPTING CHEMOTAXIS TRANSMEMBRANE PROTEIN RSp0303 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 17549875 Common RSp1656 hypothetical protein RS02215 12 None None None 17548652 Common RSp0431 PUTATIVE OXIDOREDUCTASE PROTEIN RS00890 32 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 17548379 Pathogen RSp0158 hypothetical protein RS06026 1 None None None 17548441 Common RSp0220 PROBABLE TWO-COMPONENT TRANSMEMBRANE SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN RS05203 212 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17548307 Common RSp0086 PUTATIVE RHS-RELATED PROTEIN RS05537 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549828 Common RSp1609 PROBABLE ACID SPHINGOMYELINASE-LIKE PHOSPHODIESTERASE TRANSMEMBRANE PROTEIN RS02166 3 COG1409 Icc, Predicted phosphohydrolases General function prediction only 17549542 Pathogen RSp1323 hypothetical protein RS05679 1 None None None 17549536 Common RSp1317 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05660 151 COG1522 Lrp, Transcriptional regulators Transcription 17548969 Common RSp0748 hypothetical protein RS01960 46 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 17548576 Common RSp0355 hypothetical protein RS00761 76 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 17549531 Common RSp1312 hypothetical protein RS05665 35 None None None 17549477 Common acpD PUTATIVE [ACYL-CARRIER-PROTEIN] PHOSPHODIESTERASE RSp1258 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 17549276 Common RSp1055 PROBABLE TRANSMEMBRANE ALDEHYDE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS02392 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 17548461 Common RSp0240 hypothetical protein RS05183 167 COG3281 Ble, Uncharacterized protein, probably involved in trehalose biosynthesis Carbohydrate transport and metabolism 17549128 Pathogen RSp0907 PUTATIVE TRANSMEMBRANE PROTEIN RS01678 1 None None None 17549347 Common RSp1126 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05493 105 COG0583 LysR, Transcriptional regulator Transcription 17549867 Pathogen RSp1648 hypothetical protein RS02207 1 None None None 17548549 Common RSp0328 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS05438 21 COG1802 GntR, Transcriptional regulators Transcription 17548963 Common RSp0742 PUTATIVE LIPOPROTEIN RS01966 4 None None None 17548399 Pathogen RSp0178 hypothetical protein RS04690 1 None None None 17548811 Common RSp0590 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03889 73 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 17549845 Common RSp1626 hypothetical protein RS02184 49 COG3153 COG3153, Predicted acetyltransferase General function prediction only 17548446 Common fca p-hydroxycinnamoyl CoA hydratase/lyase RSp0225 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 17548933 Common RSp0712 hypothetical protein RS01737 17 COG5588 COG5588, Uncharacterized conserved protein Function unknown 17549676 Common RSp1457 PUTATIVE CATION-EFFLUX SYSTEM SIGNAL PEPTIDE PROTEIN RS03087 156 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17548438 Common tISRso5 ISRSO5-TRANSPOSASE PROTEIN RSp0217 43 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 17548680 Common RSp0459 PUTATIVE RHS-RELATED PROTEIN RS00947 69 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549432 Common cls cardiolipin synthetase RSp1211 143 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 17549640 Common RSp1421 hypothetical protein RS03121 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 17549183 Common RSp0962 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS02293 81 COG1396 HipB, Predicted transcriptional regulators Transcription 17548687 Pathogen RSp0466 hypothetical protein RS00954 1 None None None 17549363 Common RSp1142 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS05470 10 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 17548507 Common hmsH PUTATIVE HEMIN-BINDING OUTER MEMBRANE TRANSMEMBRANE PROTEIN RSp0286 20 COG5373 COG5373, Predicted membrane protein Function unknown 17548876 Common copR PROBABLE TWO COMPONENT RESPONSE REGULATOR TRANSCRIPTION REGULATOR PROTEIN RSp0655 212 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 17549802 Common RSp1583 hypothetical protein RS02139 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 17549311 Pathogen RSp1090 hypothetical protein RS02595 1 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 17548360 Common RSp0139 hypothetical protein RS02981 17 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 17549192 Common RSp0971 PROBABLE TRANSMEMBRANE PROTEIN RS02303 8 None None None 17549154 Common RSp0933 PROBABLE AMINO ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS05400 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 17549260 Common RSp1039 PUTATIVE OUTER MEMBRANE CHANNEL LIPOPROTEIN TRANSMEMBRANE RS02376 98 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548646 Common RSp0425 hypothetical protein RS00882 58 COG1926 COG1926, Predicted phosphoribosyltransferases General function prediction only 17549422 Common RSp1201 PROBABLE SIGNAL PEPTIDE PROTEIN RS03145 13 None None None 17548689 Common RSp0468 PROBABLE GENERAL SECRETION PATHWAY GSPG-RELATED TRANSMEMBRANE PROTEIN RS00346 71 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 17548868 Common RSp0647 PUTATIVE ENOYL-COENZYME A HYDRATASE PROTEIN RS05575 161 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 17548838 Common RSp0617 hypothetical protein RS03750 126 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 17548823 Pathogen RSp0602 PROBABLE SIGNAL PEPTIDE PROTEIN RS03877 1 None None None 17549568 Common RSp1349 PUTATIVE TRANSCRIPTION REGULATOR PROTEIN RS04778 62 COG0640 ArsR, Predicted transcriptional regulators Transcription 17549015 Common RSp0794 aspartate aminotransferase RS01913 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 17548818 Common RSp0597 hypothetical protein RS03882 64 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 17548833 Common RSp0612 PROBABLE TRANSMEMBRANE PROTEIN RS03755 9 None None None 17549897 Common RSp1678 PROBABLE TRANSMEMBRANE PROTEIN RS02237 138 COG2252 COG2252, Permeases General function prediction only 17549371 Common RSp1150 hypothetical protein RS05437 5 None None None 17549043 Pathogen RSp0822 hypothetical protein RS05373 2 None None None 17549241 Common epsA EPS I POLYSACCHARIDE EXPORT OUTER MEMBRANE TRANSMEMBRANE PROTEIN RSp1020 121 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 17549394 Common RSp1173 PROBABLE LIPOPROTEIN TRANSMEMBRANE RS05063 94 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 17549234 Common RSp1013 PUTATIVE TRANSFERASE PROTEIN RS02347 8 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 17549264 Common RSp1043 PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN RS02380 172 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549832 Common hpaI2 PROBABLE 2,4-DIHYDROXYHEPT-2-ENE-1,7-DIOIC ACID ALDOLASE PROTEIN RSp1613 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 17548285 Common opuC PUTATIVE GLYCINE BETAINE TRANSMEMBRANE AND PERIPLASMIC ABC TRANSPORTER PROTEIN RSp0064 67 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 17549345 Common RSp1124 PUTATIVE NADP-DEPENDENT ZINC-TYPE ALCOHOL DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS05494 200 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 17548925 Common RSp0704 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS01745 94 COG1414 IclR, Transcriptional regulator Transcription 17549280 Common RSp1059 3-hydroxybutyrate dehydrogenase RS02396 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 17549738 Common RSp1519 PUTATIVE SULFATE TRANSPORTER TRANSMEMBRANE PROTEIN RS04796 151 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 17549768 Pathogen RSp1549 hypothetical protein RS02105 1 None None None 17548326 Common RSp0105 hypothetical protein RS03018 6 None None None 17548388 Common RSp0167 hypothetical protein RS04679 6 None None None 17549737 Common RSp1518 PROBABLE ALANIN-RICH SIGNAL PEPTIDE PROTEIN RS04795 3 None None None 17549709 Pathogen RSp1490 PROBABLE TRANSMEMBRANE PROTEIN RS03053 1 None None None 17549038 Common RSp0817 PROBABLE OUTER MEMBRANE DRUG EFFLUX LIPOPROTEIN RS01890 122 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548769 Common tISRso8b ISRSO8-TRANSPOSASE ORFB PROTEIN RSp0548 150 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549402 Common RSp1181 PUTATIVE OUTER MEMBRANE EFFLUX TRANSMEMBRANE PROTEIN RS05071 68 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17549229 Common RSp1008 PROBABLE GLYCOSYL TRANSFERASE TRANSMEMBRANE PROTEIN RS02342 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 17549795 Common RSp1576 PROBABLE AMINO-ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS02132 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 17548342 Common prpC methylcitrate synthase RSp0121 194 COG0372 GltA, Citrate synthase Energy production and conversion 17549318 Common RSp1097 PROBABLE TRANSMEMBRANE PROTEIN RS02603 174 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 17549581 Common tISRso17 ISRSO17-TRANSPOSASE PROTEIN RSp1362 35 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 17548627 Common RSp0406 hypothetical protein RS00863 3 None None None 17549527 Common RSp1308 PUTATIVE TRANSMEMBRANE PROTEIN RS05691 118 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 17548750 Common RSp0529 PUTATIVE CATION EFFLUX PROTEIN RS00408 160 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 17548412 Pathogen RSp0191 hypothetical protein RS04703 1 None None None 17548775 Common chrB PROBABLE CHROMATE RESISTANCE SIGNAL PEPTIDE PROTEIN RSp0554 26 COG4275 COG4275, Uncharacterized conserved protein Function unknown 17548620 Pathogen RSp0399 hypothetical protein RS00827 1 None None None 17548706 Common RSp0485 PUTATIVE HYDROLASE PHOSPHATASE PROTEIN RS00363 133 COG0546 Gph, Predicted phosphatases General function prediction only 17548979 Common RSp0758 hypothetical protein RS01950 39 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 17549460 Pathogen RSp1239 hypothetical protein RS03183 3 None None None 17549383 Common RSp1162 PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN RS05645 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 17549818 Common RSp1599 PUTATIVE OUTER MEMBRANE DRUG EFFLUX LIPOPROTEIN RS02156 111 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 17548725 Common tISRso12b ISRSO12-TRANSPOSASE ORFB PROTEIN RSp0504 127 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 17549306 Common cpaF2 PROBABLE SECRETION ATPASE PROTEIN RSp1085 164 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 17549030 Common RSp0809 hypothetical protein RS01898 2 None None None 17548290 Common adhC1 PROBABLE BIFUNCTIONAL: GLUTATHIONE-DEPENDENT FORMALDEHYDE DEHYDROGENASE AND ALCOHOL DEHYDROGENASE CLASS III OXIDOREDUCTASE PROTEIN RSp0069 191 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 17548335 Common RSp0114 PROBABLE TRANSMEMBRANE PROTEIN RS03008 27 COG4705 COG4705, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 17549301 Common RSp1080 PROBABLE TRANSMEMBRANE PROTEIN RS02587 11 COG4655 COG4655, Predicted membrane protein Function unknown 17548849 Common hoxN PROBABLE HIGH AFFINITY NICKEL TRANSPORTER TRANSMEMBRANE PROTEIN RSp0628 37 COG3376 HoxN, High-affinity nickel permease Inorganic ion transport and metabolism 17549524 Common RSp1305 PUTATIVE RHS-RELATED PROTEIN RS05695 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 17549696 Common RSp1477 PROBABLE SIGNAL PEPTIDE PROTEIN RS03066 2 None None None 17548916 Common RSp0695 HYPOTHETICAL SIGNAL PEPTIDE PROTEIN RS01754 24 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 17548840 Common cbiG cobalamin biosynthesis protein CbiG RSp0619 91 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 17548898 Common metR PUTATIVE TRANSCRIPTIONAL ACTIVATOR METR TRANSCRIPTION REGULATOR PROTEIN RSp0677 186 COG0583 LysR, Transcriptional regulator Transcription 17549760 Pathogen RSp1541 hypothetical protein RS02097 1 None None None 17549777 Common pgl PROBABLE 6-PHOSPHOGLUCONOLACTONASE OXIDOREDUCTASE PROTEIN RSp1558 114 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 17548299 Common RSp0078 PROBABLE TRANSMEMBRANE PROTEIN RS05543 118 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17549293 Pathogen RSp1072 hypothetical protein RS02541 1 None None None 17549538 Common RSp1319 hypothetical protein RS05658 20 COG3832 COG3832, Uncharacterized conserved protein Function unknown 17549092 Pathogen hrpD HRPD PROTEIN RSp0871 1 None None None 17548812 Pathogen RSp0591 hypothetical protein RS03891 1 None None None 17549143 Common RSp0922 hypothetical protein RS01693 13 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 17548702 Common RSp0481 PROBABLE SUBSTRATE-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN RS00359 177 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 17548701 Common RSp0480 PROBABLE AMINO ACID TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS00358 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 17549586 Common RSp1367 PROBABLE LIPOPROTEIN RS02091 44 COG3245 CycB, Cytochrome c5 Energy production and conversion 17549784 Common coxN PROBABLE CYTOCHROME C OXIDASE POLYPEPTIDE I (CYTOCHROME BB3 SUBUNIT 1) OXIDOREDUCTASE PROTEIN RSp1565 168 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 17549322 Common galE PROBABLE UDP-GLUCOSE 4-EPIMERASE PROTEIN RSp1101 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 17549269 Common RSp1048 PUTATIVE FORMATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN RS02385 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 17549413 Common RSp1192 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS03136 111 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 17548664 Common RSp0443 PROBABLE TRANSCRIPTION REGULATOR PROTEIN RS00902 95 COG1309 AcrR, Transcriptional regulator Transcription 17548859 Common RSp0638 PROBABLE COMPOSITE ATP-BINDING TRANSMEMBRANE ABC TRANSPORTER PROTEIN RS03729 249 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 17548482 Pathogen RSp0261 PUTATIVE TRANSMEMBRANE PROTEIN RS03705 2 None None None 17549090 Common hrpF type III secretion system protein RSp0869 11 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 17548905 Common RSp0684 hypothetical protein RS01765 36 COG3382 COG3382, Uncharacterized conserved protein Function unknown 17549178 Pathogen RSp0957 hypothetical protein RS02288 1 COG5544 COG5544, Predicted periplasmic lipoprotein General function prediction only 17549557 Common RSp1338 hypothetical protein RS04763 11 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 17548850 Common RSp0629 PUTATIVE VGR-RELATED PROTEIN RS03738 50 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 17548757 Common RSp0536 PROBABLE SUGAR-PROTON SYMPORTER TRANSMEMBRANE PROTEIN RS00416 123 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 17548518 Pathogen RSp0297 hypothetical protein RS05477 1 None None None 17549634 Pathogen RSp1415 hypothetical protein RS03126 1 None None None 17548520 Pathogen RSp0299 hypothetical protein RS05475 1 None None None 17549088 Common hrcJ HRP CONSERVED LIPOPROTEIN HRCJ TRANSMEMBRANE RSp0867 56 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion