Sinorhizobium meliloti 1021, complete genome NC_003047 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 15964529 Common - HYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN SMc00831 170 COG0583 LysR, Transcriptional regulator Transcription 15964561 Common - PUTATIVE SULFITE BIOSYNTHESIS PROTEIN SMc00896 188 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 15965397 Common - hypothetical protein SMc00952 84 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 15966523 Common - hypothetical protein SMc03986 5 None None None 15964788 Common - PUTATIVE PERMEASE PROTEIN SMc02379 216 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 15965829 Common - PUTATIVE HYDANTOIN RACEMASE PROTEIN SMc04361 40 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 15965889 Common TRm22 PROBABLE TRANSPOSASE PROTEIN SMc01453 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15963940 Common - PIT ACCESSORY PROTEIN SMc02862 64 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 15963981 Common - hypothetical protein SMc02903 103 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 15965105 Common rpsG 30S ribosomal protein S7 SMc01313 238 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 15965310 Common uvrA excinuclease ABC subunit A SMc01235 244 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 15964372 Common - hypothetical protein SMc02313 8 COG1598 COG1598, Uncharacterized conserved protein Function unknown 15965386 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00941 1 None None None 15964672 Common rimJ PROBABLE RIBOSOMAL-PROTEIN-ALANINE ACETYLTRANSFERASE SMc00075 133 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15966930 Nonpathogen - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc03794 2 None None None 15964348 Common TRm11b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc02289 48 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965938 Common - hypothetical protein SMc01857 55 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 15967069 Common asd aspartate-semialdehyde dehydrogenase SMc04410 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 15966844 Common - PUTATIVE ALKALINE PHOSPHATASE TRANSMEMBRANE PROTEIN SMc03243 59 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 15967087 Common parB PROBABLE CHROMOSOME PARTITIONING PROTEIN PARB SMc02801 188 COG1475 Spo0J, Predicted transcriptional regulators Transcription 15965154 Nonpathogen - hypothetical protein SMc01263 2 None None None 15965661 Common - hypothetical protein SMc04238 4 None None None 15965963 Common - hypothetical protein SMc01579 48 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 15965308 Common nrd ribonucleotide-diphosphate reductase subunit alpha SMc01237 183 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 15964490 Nonpathogen - hypothetical protein SMc00792 1 None None None 15964181 Common - PUTATIVE ESTERASE PROTEIN SMc01093 81 COG0657 Aes, Esterase/lipase Lipid metabolism 15963796 Common chvG HISTIDINE KINASE SENSORY TRANSMEMBRANE PROTEIN SMc04446 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15964683 Common - hypothetical protein SMc00023 87 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 15965458 Common - hypothetical protein SMc00277 219 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 15965923 Common ftsQ CELL DIVISION TRANSMEMBRANE PROTEIN SMc01872 78 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 15964629 Common - enoyl-CoA hydratase SMc00976 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 15965387 Common - hypothetical protein SMc00942 7 None None None 15964620 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00985 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15964157 Common olsA PUTATIVE ACYLTRANSFERASE TRANSMEMBRANE PROTEIN SMc01116 107 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15965641 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc04218 186 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 15964357 Nonpathogen TRm30.3 PUTATIVE TRANSPOSASE NUMBER 3 FOR INSERTION SEQUENCE ISRM30 SMc02301 1 None None None 15964477 Common - PUTATIVE FAD-DEPENDENT OXIDOREDUCTASE PROTEIN SMc00779 31 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15965033 Common birA PROBABLE BIOTIN--[ACETYL-COA-CARBOXYLASE] SYNTHETASE PROTEIN SMc01928 185 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 15965040 Common - hypothetical protein SMc01935 192 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 15967090 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA SMc02798 192 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 15965822 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04348 25 COG1309 AcrR, Transcriptional regulator Transcription 15964064 Common - hypothetical protein SMc00391 8 COG3701 TrbF, Type IV secretory pathway, TrbF components Intracellular trafficking and secretion 15964245 Common - hypothetical protein SMc02202 2 None None None 15966497 Common - hypothetical protein SMc03960 125 COG0824 FcbC, Predicted thioesterase General function prediction only 15967079 Common - hypothetical protein SMc04092 10 COG5508 COG5508, Uncharacterized conserved small protein Function unknown 15966347 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02418 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965273 Common cls PUTATIVE CARDIOLIPIN SYNTHETASE TRANSMEMBRANE PROTEIN SMc02076 156 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15966399 Common tlpA PUTATIVE THIOL:DISULFIDE INTERCHANGE REDOX-ACTIVE CENTER TRANSMEMBRANE PROTEIN SMc00726 134 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 15966982 Common acnA aconitate hydratase SMc03846 223 COG1048 AcnA, Aconitase A Energy production and conversion 15964233 Common pyrC dihydroorotase SMc02166 87 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 15966435 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha SMc00690 177 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 15966728 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc03118 148 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 15963975 Common - PUTATIVE CYTOCHROME C TRANSMEMBRANE PROTEIN SMc02897 56 COG3474 COG3474, Cytochrome c2 Energy production and conversion 15966849 Common - hypothetical protein SMc03748 11 COG4328 COG4328, Uncharacterized protein conserved in bacteria Function unknown 15966298 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc02033 78 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15966445 Common - PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE PROTEIN SMc00680 195 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 15965741 Common - hypothetical protein SMc04347 59 COG3894 COG3894, Uncharacterized metal-binding protein General function prediction only 15964011 Common - hypothetical protein SMc00338 4 None None None 15964822 Common - hypothetical protein SMc02655 16 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 15964918 Common - hypothetical protein SMc00596 4 None None None 15966669 Common - PUTATIVE NADPH DEHYDROGENASE QUINONE REDUCTASE TRANSMEMBRANE PROTEIN SMc03185 97 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 15965722 Common - hypothetical protein SMc04314 15 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 15966289 Common - hypothetical protein SMc02024 111 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 15966504 Common ruvC Holliday junction resolvase SMc03967 196 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 15967021 Common hisC2 histidinol-phosphate aminotransferase SMc03885 228 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 15965941 Common - PUTATIVE AMIDASE (AMPD PROTEIN) SMc01854 112 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 15965872 Common serB PUTATIVE PHOSPHOSERINE PHOSPHATASE PROTEIN SMc01494 154 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 15967005 Common tbpA thiamin transporter substrate binding subunit SMc03869 81 COG4143 TbpA, ABC-type thiamine transport system, periplasmic component Coenzyme metabolism 15964263 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02145 9 None None None 15964896 Common acpP acyl carrier protein SMc00573 209 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15964795 Common amn AMP nucleosidase SMc02386 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 161621435 Common argC N-acetyl-gamma-glutamyl-phosphate reductase SMc01801 206 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 15965874 Common degP2 PUTATIVE PROTEASE PRECURSOR SIGNAL PEPTIDE PROTEIN SMc01438 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 15965390 Common gpt xanthine-guanine phosphoribosyltransferase SMc00945 78 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 15964277 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC PROTEIN SMc02219 87 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15966885 Common - PUTATIVE PROTEASE TRANSMEMBRANE PROTEIN SMc03286 7 COG5640 COG5640, Secreted trypsin-like serine protease Posttranslational modification, protein turnover, chaperones 15966334 Common - hypothetical protein SMc02354 41 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 15964033 Common - hypothetical protein SMc00360 17 COG3672 COG3672, Predicted periplasmic protein Function unknown 15966362 Common - hypothetical protein SMc02434 31 None None None 15965564 Common folP PROBABLE DIHYDROPTEROATE SYNTHASE ANTIBIOTIC RESISTANCE TRANSFERASE FOLATE PROTEIN SMc00462 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 15965374 Common sseA PUTATIVE THIOSULFATE SULFURTRANSFERASE PROTEIN SMc01172 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 15965814 Common mocA PUTATIVE OXIDOREDUCTASE PROTEIN SMc04322 200 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15964856 Common - hypothetical protein SMc02559 31 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 15964284 Common - hypothetical protein SMc02226 17 COG3832 COG3832, Uncharacterized conserved protein Function unknown 15965991 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01626 134 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15965034 Common - hypothetical protein SMc01929 157 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 15966545 Common - hypothetical protein SMc04008 38 COG3492 COG3492, Uncharacterized protein conserved in bacteria Function unknown 15964998 Common - enoyl-CoA hydratase SMc01806 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 15965148 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01269 21 COG1396 HipB, Predicted transcriptional regulators Transcription 15967028 Common TRm21 PUTATIVE TRANSPOSASE PROTEIN SMc03892 33 COG5433 COG5433, Transposase DNA replication, recombination, and repair 15966614 Common pntAb PROBABLE NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA PART 2 TRANSMEMBRANE PROTEIN SMc03939 117 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 15964513 Common guaB inositol-5-monophosphate dehydrogenase SMc00815 240 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 15966693 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03209 36 COG1846 MarR, Transcriptional regulators Transcription 15964644 Common - hypothetical protein SMc00961 61 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 15966477 Common - hypothetical protein SMc00648 7 None None None 15965496 Common - hypothetical protein SMc00540 40 COG2833 COG2833, Uncharacterized protein conserved in bacteria Function unknown 15964492 Common - two-component response regulator SMc00794 99 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 15966467 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00658 58 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 15966512 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03975 187 COG0583 LysR, Transcriptional regulator Transcription 15964951 Common - hypothetical protein SMc01760 6 None None None 15964018 Common - hypothetical protein SMc00345 30 COG3526 COG3526, Uncharacterized protein conserved in bacteria Posttranslational modification, protein turnover, chaperones 15967012 Common - HYPOTHETICAL HEAT SHOCK-LIKE PROTEIN SMc03876 81 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 15964813 Common smpB SsrA-binding protein SMc02405 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 15964124 Common - hypothetical protein SMc01149 63 COG3832 COG3832, Uncharacterized conserved protein Function unknown 15965301 Common gcvH PROBABLE GLYCINE CLEAVAGE SYSTEM H PROTEIN SMc02048 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 15965839 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ SMc01407 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 15966002 Common - hypothetical protein SMc01637 62 COG3246 COG3246, Uncharacterized conserved protein Function unknown 15964027 Common - hypothetical protein SMc00354 170 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 15964485 Common dppB1 PROBABLE DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN SMc00787 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965853 Nonpathogen - hypothetical protein SMc01417 1 None None None 15965288 Nonpathogen bioS BIOTIN-REGULATED PROTEIN SMc02061 1 None None None 15963784 Common folC PROBABLE FOLC BIFUNCTIONAL PROTEIN INCLUDES: FOLYLPOLYGLUTAMATE SYNTHASE AND DIHYDROFOLATE SYNTHASE SMc02763 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 15966902 Common vsr PROBABLE DNA MISMATCH ENDONUCLEASE, PATCH REPAIR PROTEIN SMc03764 71 COG3727 Vsr, DNA G:T-mismatch repair endonuclease DNA replication, recombination, and repair 15964463 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00766 64 COG0583 LysR, Transcriptional regulator Transcription 15964481 Common - hypothetical protein SMc00783 127 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 15965436 Nonpathogen - hypothetical protein SMc00255 1 None None None 15963912 Common glk glucokinase SMc02835 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 15966892 Nonpathogen - hypothetical protein SMc03294 4 COG5586 COG5586, Uncharacterized conserved protein Function unknown 15964619 Common - hypothetical protein SMc00986 17 None None None 161621425 Common trmE tRNA modification GTPase TrmE SMc02797 219 COG0486 ThdF, Predicted GTPase General function prediction only 15966870 Common - PUTATIVE AMINO ACID DEHYDROGENASE TRANSMEMBRANE PROTEIN SMc03265 139 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15963881 Common cdd cytidine deaminase SMc04124 128 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 161621426 Common obgE GTPase ObgE SMc03775 249 COG0536 Obg, Predicted GTPase General function prediction only 15965010 Common lon PROBABLE ATP-DEPENDENT PROTEASE LA PROTEIN SMc01905 229 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 15964380 Common - PUTATIVE SUGAR ISOMERASE PROTEIN SMc02321 29 COG4952 COG4952, Predicted sugar isomerase Cell envelope biogenesis, outer membrane 15966947 Common - hypothetical protein SMc03811 9 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15964881 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00558 131 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15966320 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02339 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964744 Common - hypothetical protein SMc00117 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 15966449 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN SMc00676 119 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15963919 Common - PUTATIVE METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE TRANSCRIPTION REGULATOR SMc02841 211 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 15964888 Common rplI 50S ribosomal protein L9 SMc00565 214 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 15964522 Common - hypothetical protein SMc00824 11 COG5403 COG5403, Uncharacterized conserved protein Function unknown 15964935 Common acvB hypothetical protein SMc00613 19 COG3946 VirJ, Type IV secretory pathway, VirJ component Intracellular trafficking and secretion 15966495 Common tolQ PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc03958 126 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 15966462 Nonpathogen - hypothetical protein SMc00663 1 None None None 15966248 Common - hypothetical protein SMc01961 38 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15964582 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00877 82 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 15966558 Common - hypothetical protein SMc04021 41 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15965768 Common - hypothetical protein SMc04186 2 None None None 15966785 Common - hypothetical protein SMc02503 31 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 15965356 Common - DNA polymerase III subunit delta' SMc01190 232 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 15964205 Common - hypothetical protein SMc01714 69 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 15965712 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase SMc04305 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 15963800 Common - hypothetical protein SMc02564 35 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 15964044 Common - hypothetical protein SMc00371 36 COG3685 COG3685, Uncharacterized protein conserved in bacteria Function unknown 15966174 Nonpathogen - hypothetical protein SMc01748 1 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 15964447 Common aglR PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03060 127 COG1609 PurR, Transcriptional regulators Transcription 15966659 Common - PUTATIVE NUCLEOSIDE HYDROLASE PROTEIN SMc03175 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 15965626 Common - hypothetical protein SMc00137 24 COG5425 COG5425, Usg protein, probable subunit of phosphoribosylanthranilate isomerase Amino acid transport and metabolism 15965903 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01467 1 None None None 15965716 Common cobQ cobyric acid synthase SMc04309 154 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 15965992 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01627 147 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15964148 Common mutS DNA mismatch repair protein SMc01125 199 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 15965518 Common - hypothetical protein SMc00502 87 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 15966009 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01644 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965830 Common - PUTATIVE TRANSPORT PROTEIN SMc04362 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15963839 Common glxA PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02609 130 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 15964149 Common glnD PII uridylyl-transferase SMc01124 126 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 15964733 Common bla PUTATIVE BETA-LACTAMASE SIGNAL PEPTIDE PROTEIN SMc00047 67 COG2367 PenP, Beta-lactamase class A Defense mechanisms 15964941 Common - hypothetical protein SMc00619 80 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 15966633 Nonpathogen - hypothetical protein SMc02988 4 COG4423 COG4423, Uncharacterized protein conserved in bacteria Function unknown 15966994 Common pheAa chorismate mutase SMc03858 49 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 15965554 Common - hypothetical protein SMc00472 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 15964097 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00425 154 COG1522 Lrp, Transcriptional regulators Transcription 15965242 Common - HYPOTHETICAL UNKNOWN TRANSMEMBRANE PROTEIN SMc02107 7 None None None 15965181 Common - hypothetical protein SMc01013 85 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 15966122 Common - hypothetical protein SMc02707 84 COG3153 COG3153, Predicted acetyltransferase General function prediction only 15964302 Common pyrD dihydroorotate dehydrogenase 2 SMc02245 225 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 15965614 Common - hypothetical protein SMc00147 48 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 15963945 Common - PUTATIVE MULTIDRUG-EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc02867 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 15964723 Common - PUTATIVE OXIDOREDUCTASE TRANSMEMBRANE PROTEIN SMc00105 213 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 15966823 Common sdhA succinate dehydrogenase flavoprotein subunit SMc02465 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 15966046 Common - hypothetical protein SMc01741 4 None None None 15964712 Common - hypothetical protein SMc00038 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 15965944 Common - PUTATIVE AMINO ACID EFFLUX PROTEIN SMc01851 106 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15966232 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01945 123 COG1846 MarR, Transcriptional regulators Transcription 15965596 Common - hypothetical protein SMc00164 14 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 15965066 Common - hypothetical protein SMc01351 18 COG3811 COG3811, Uncharacterized protein conserved in bacteria Function unknown 15963956 Common nagA PROBABLE N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE PROTEIN SMc02878 120 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 15965863 Nonpathogen - hypothetical protein SMc01427 1 None None None 15966143 Common fhs PROBABLE FORMATE--TETRAHYDROFOLATE LIGASE PROTEIN SMc02728 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 15965696 Common cobD PROBABLE COBALAMIN BIOSYNTHESIS TRANSMEMBRANE PROTEIN SMc04279 149 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 15965295 Common - hypothetical protein SMc02054 3 None None None 15965488 Common - cysteine desulfurase activator complex subunit SufB SMc00530 185 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 15965464 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00283 118 COG0583 LysR, Transcriptional regulator Transcription 15963902 Common - PUTATIVE AMINOPEPTIDASE PROTEIN SMc02825 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 15966937 Common - PUTATIVE THIOREDOXIN PROTEIN SMc03801 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 15965014 Common - hypothetical protein SMc01909 85 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 15965423 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc00245 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 15965544 Common - hypothetical protein SMc00481 8 COG1289 COG1289, Predicted membrane protein Function unknown 15966590 Common - hypothetical protein SMc04054 47 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 15965133 Common rpoA DNA-directed RNA polymerase subunit alpha SMc01285 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 15964572 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00929 169 COG0583 LysR, Transcriptional regulator Transcription 15966266 Common - PUTATIVE SUGAR TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc01979 195 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15966098 Common - hypothetical protein SMc02683 181 COG1496 COG1496, Uncharacterized conserved protein Function unknown 15966851 Common TRm11a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc03313 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964991 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01799 5 None None None 15966628 Common - PUTATIVE ORNITHINE, DAP, OR ARGININE DECARBOXYLASE PROTEIN SMc02983 215 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 15964291 Common - hypothetical protein SMc02234 28 None None None 15966113 Common apt adenine phosphoribosyltransferase SMc02698 195 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 15965020 Common nuoD1 NADH dehydrogenase subunit D SMc01915 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 15965787 Common - PUTATIVE HEMOLYSIN-TYPE CALCIUM-BINDING PROTEIN SMc04206 34 None None None 15963977 Common pheA prephenate dehydratase SMc02899 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 15966810 Common - hypothetical protein SMc02478 101 COG1485 COG1485, Predicted ATPase General function prediction only 15966783 Common - hypothetical protein SMc02505 3 None None None 15966913 Common proB1 gamma-glutamyl kinase SMc03776 193 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 15966664 Common phaC1 putative monovalent cation/H+ antiporter subunit C SMc03180 103 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 15964265 Common pstA PUTATIVE PHOSPHATE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02143 228 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 15965248 Common rpsB 30S ribosomal protein S2 SMc02101 224 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 15966457 Common - HYPOTHETICAL, TRANSMEMBRANE PROTEIN SMc00668 23 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 15965087 Common - hypothetical protein SMc04435 14 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15964450 Common aglG ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03063 149 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15964803 Common - hypothetical protein SMc02394 68 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 15966950 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03814 115 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15964334 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02277 1 None None None 15964081 Common uppP undecaprenyl pyrophosphate phosphatase SMc00408 189 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 15964974 Common - hypothetical protein SMc01783 29 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 15966621 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02976 27 COG1846 MarR, Transcriptional regulators Transcription 15963774 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc02773 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 15967088 Common parA PROBABLE CHROMOSOME PARTITIONING PROTEIN PARA SMc02800 211 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 15967081 Common - hypothetical protein SMc04094 41 COG3820 COG3820, Uncharacterized protein conserved in bacteria Function unknown 15966437 Common - hypothetical protein SMc00688 100 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 15966966 Common - hypothetical protein SMc03830 60 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 15966340 Common - PUTATIVE BRANCHED CHAIN AMINO ACID TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02360 66 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 15966291 Common - PUTATIVE BETA-LACTAMASE PRECURSOR PROTEIN SMc02026 30 COG2367 PenP, Beta-lactamase class A Defense mechanisms 15965257 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase SMc02092 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 15966583 Common azu2 PROBABLE PSEUDOAZURIN (BLUE COPPER PROTEIN) SMc04047 25 COG3794 PetE, Plastocyanin Energy production and conversion 15964604 Common glyQ glycyl-tRNA synthetase subunit alpha SMc00855 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 15966217 Common ureF PUTATIVE UREASE ACCESSORY PROTEIN SMc01831 46 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 15966251 Common - PUTATIVE SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc01964 149 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 15964107 Common iolC PUTATIVE SUGAR KINASE PROTEIN SMc01165 169 COG3892 COG3892, Uncharacterized protein conserved in bacteria Function unknown 15964591 Common atpF F0F1 ATP synthase subunit B SMc00868 33 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 15966051 Common - hypothetical protein SMc01744 10 COG4424 COG4424, Uncharacterized protein conserved in bacteria Function unknown 15965735 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc04336 7 None None None 15964953 Nonpathogen - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01762 2 COG0640 ArsR, Predicted transcriptional regulators Transcription 15963861 Common ilvD3 dihydroxy-acid dehydratase SMc04144 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 15964598 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00861 146 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 15965224 Common - PUTATIVE NITRITE REDUCTASE PROTEIN SMc02124 162 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 15964541 Common hisG ATP phosphoribosyltransferase catalytic subunit SMc00917 200 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 15965542 Common murI glutamate racemase SMc00483 189 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 15965550 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc00476 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 15966058 Common - hypothetical protein SMc01554 31 COG3882 FkbH, Predicted enzyme involved in methoxymalonyl-ACP biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 15964833 Common - hypothetical protein SMc02644 171 COG2183 Tex, Transcriptional accessory protein Transcription 15964922 Common moaD PROBABLE MOLYBDOPTERIN MPT CONVERTING FACTOR, SUBUNIT 1 PROTEIN SMc00600 61 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 15966830 Common gpsA PROBABLE GLYCEROL-3-PHOSPHATE DEHYDROGENASE PROTEIN SMc03229 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 15963874 Nonpathogen - hypothetical protein SMc04131 7 None None None 15966566 Common - hypothetical protein SMc04030 58 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 15965797 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04276 7 None None None 15964160 Common - hypothetical protein SMc01113 163 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 15966201 Common - dihydropyrimidine dehydrogenase SMc01815 126 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 15966821 Common msrA2 PROBABLE PEPTIDE METHIONINE SULFOXIDE REDUCTASE PROTEIN SMc02467 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 15966736 Common - hypothetical protein SMc03110 20 COG4702 COG4702, Uncharacterized conserved protein Function unknown 15965004 Common TRm20C PUTATIVE PARTIAL TRANSPOSASE PROTEIN SMc01811 76 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964319 Common - PUTATIVE AMINOTRANSFERASE PROTEIN SMc02262 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15964637 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00968 153 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 15966172 Common - hypothetical protein SMc01520 67 COG2346 COG2346, Truncated hemoglobins General function prediction only 15964651 Common fabI1 enoyl-(acyl carrier protein) reductase SMc00005 224 COG0623 FabI, Enoyl- acyl-carrier-protein 15965080 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc01337 2 None None None 15966239 Common cysQ PUTATIVE TRANSMEMBRANE PROTEIN SMc01952 160 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 15966388 Common - hypothetical protein SMc00737 98 COG1403 McrA, Restriction endonuclease Defense mechanisms 15966798 Common - hypothetical protein SMc02490 38 COG3176 COG3176, Putative hemolysin General function prediction only 15963757 Common coaE dephospho-CoA kinase SMc02790 204 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 15963765 Common gyrB DNA gyrase subunit B SMc02782 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 15966403 Common - hypothetical protein SMc00722 32 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15964187 Common - hypothetical protein SMc01731 105 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 15965113 Common rpsS 30S ribosomal protein S19 SMc01305 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 15967040 Common - PROBABLE TRANSCRIPTION REGULATOR PROTEIN SMc04882 184 COG0583 LysR, Transcriptional regulator Transcription 15966208 Common - hypothetical protein SMc01822 27 COG4101 COG4101, Predicted mannose-6-phosphate isomerase Carbohydrate transport and metabolism 15966857 Common - hypothetical protein SMc03250 14 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964213 Nonpathogen - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01706 2 None None None 15966328 Common asfB PUTATIVE FERREDOXIN ASFB IRON-SULFUR PROTEIN SMc02347 8 COG1146 COG1146, Ferredoxin Energy production and conversion 15965079 Common TRm11b PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc01338 48 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964137 Common - hypothetical protein SMc01136 15 COG5375 COG5375, Uncharacterized protein conserved in bacteria Function unknown 15966068 Common tdh L-threonine 3-dehydrogenase SMc01564 211 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 15965977 Common TRm5 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc01612 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15963782 Common trpA tryptophan synthase subunit alpha SMc02765 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 15963806 Common hisH imidazole glycerol phosphate synthase subunit HisH SMc02572 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 15964113 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01159 83 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 15966191 Common - PUTATIVE SUGAR KINASE PROTEIN SMc01503 180 COG1069 AraB, Ribulose kinase Energy production and conversion 15965281 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc02068 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 15964902 Common ksgA dimethyladenosine transferase SMc00579 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 15966739 Common - hypothetical protein SMc03107 3 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15965265 Common exbD PROBABLE BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN SMc02084 135 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 15963936 Common dnaJ PROBABLE CHAPERONE PROTEIN SMc02858 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 15966696 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03150 145 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 15965918 Common recN PROBABLE DNA REPAIR PROTEIN SMc01877 205 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 15965519 Common - hypothetical protein SMc00501 24 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 15965029 Common nuoK1 NADH dehydrogenase subunit K SMc01924 135 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 15966517 Common - hypothetical protein SMc03980 17 COG3554 COG3554, Uncharacterized protein conserved in bacteria Function unknown 15966641 Common - PUTATIVE OUTER MEMBRANE LIPOPROTEIN TRANSMEMBRANE SMc03157 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 15966730 Common - PUTATIVE ALCOHOL DEHYDROGENASE PROTEIN SMc03116 91 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 15963858 Common - PUTATIVE PERMEASE PROTEIN SMc04147 15 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15964399 Common fliF flagellar MS-ring protein SMc03014 125 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 15964917 Common ndk nucleoside diphosphate kinase SMc00595 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 15966654 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03170 90 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 15966241 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01954 97 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 15965070 Common - hypothetical protein SMc01347 29 COG4765 COG4765, Uncharacterized protein conserved in bacteria Function unknown 15963799 Common - hypothetical protein SMc02563 107 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 15964827 Common arsH hypothetical protein SMc02650 55 COG0431 COG0431, Predicted flavoprotein General function prediction only 15964395 Common cheB chemotaxis-specific methylesterase SMc03010 215 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 15965559 Common - hypothetical protein SMc00467 42 COG3106 COG3106, Predicted ATPase General function prediction only 15966091 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc01595 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15965929 Common murG N-acetylglucosaminyl transferase SMc01866 203 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 15964088 Common dnaN DNA polymerase III subunit beta SMc00415 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 15965836 Common - hypothetical protein SMc01405 75 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15965891 Common dld PUTATIVE D-LACTATE DEHYDROGENASE (CYTOCHROME) PROTEIN SMc01455 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15965316 Common - PUTATIVE ANTIBIOTIC RESISTANCE (KINASE) PROTEIN SMc01228 29 COG3570 StrB, Streptomycin 6-kinase Defense mechanisms 15967010 Common - hypothetical protein SMc03874 83 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 15964056 Common gst3 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc00383 106 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15965636 Common dgkA DIACYLGLYCEROL KINASE PROTEIN SMc04213 50 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 15964251 Nonpathogen - hypothetical protein SMc02203 6 None None None 15965446 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc00265 108 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 15966953 Common - PUTATIVE SUGAR KINASE PROTEIN SMc03817 113 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 15966212 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01826 163 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 15964660 Nonpathogen - hypothetical protein SMc00130 1 None None None 15966391 Common - PUTATIVE RIBONUCLEASE RNASE BN (RBN) TRANSMEMBRANE PROTEIN SMc00734 81 COG1295 Rbn, Predicted membrane protein Function unknown 15966581 Common ilvD2 dihydroxy-acid dehydratase SMc04045 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 15964532 Common glcF PROBABLE GLYCOLATE OXIDASE IRON-SULFUR SUBUNIT PROTEIN SMc00926 167 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 15964772 Common cycK CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN SMc02363 152 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 15964452 Common aglK ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc03065 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15964426 Common - hypothetical protein SMc03041 9 None None None 15964876 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00553 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964508 Common - hypothetical protein SMc00810 178 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 15965474 Common recJ PROBABLE SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE PROTEIN SMc00292 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 15965502 Common - hypothetical protein SMc00518 106 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 15966352 Common - PUTATIVE OLIGOPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02424 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 15966976 Common - PUTATIVE ACETYLTRANSFERASE (ANTIBIOTIC RESISTANCE) PROTEIN SMc03840 124 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 15966486 Common - PUTATIVE HEAT RESISTANT AGGLUTININ 1 PROTEIN SMc00638 26 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 15965203 Common lpdA1 dihydrolipoamide dehydrogenase SMc01035 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15965522 Nonpathogen - PUTATIVE TRANSMEMBRANE PROTEIN SMc00498 1 None None None 15964439 Common flhA flagellar biosynthesis protein A SMc03054 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 15965211 Common ntrB NITROGEN REGULATION PROTEIN SMc01042 209 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 15966570 Common - PUTATIVE DIPEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04034 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15966075 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01571 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966364 Common prfA peptide chain release factor 1 SMc02436 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 15965671 Common - hypothetical protein SMc04248 70 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 15965849 Common suhR PROBABLE SUPPRESSOR OF E.COLI RPOH THERMOSENSITIVE MUTATION TRANSMEMBRANE PROTEIN SMc01492 4 None None None 15964322 Common secD2 bifunctional preprotein translocase subunit SecD/SecF SMc02265 208 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 15965304 Nonpathogen - hypothetical protein SMc01241 1 None None None 15966061 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01557 1 None None None 15965227 Common relE hypothetical protein SMc04436 27 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 15965335 Common coaD phosphopantetheine adenylyltransferase SMc01209 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 15965840 Common - hypothetical protein SMc01408 28 COG4312 COG4312, Uncharacterized protein conserved in bacteria Function unknown 15966230 Common - 2-hydroxyacid dehydrogenase SMc01943 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 15966432 Common - hypothetical protein SMc00693 13 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 15964259 Common - hypothetical protein SMc02149 6 None None None 15965417 Nonpathogen - hypothetical protein SMc00239 2 None None None 15966818 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02470 123 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 15964376 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02317 10 None None None 15966895 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03297 1 None None None 15963964 Nonpathogen - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02886 2 None None None 15966321 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02340 143 COG2188 PhnF, Transcriptional regulators Transcription 15966028 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01663 184 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15963888 Common - hypothetical protein SMc04117 14 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 15963922 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02844 93 COG1309 AcrR, Transcriptional regulator Transcription 15966588 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04052 87 COG1846 MarR, Transcriptional regulators Transcription 15964199 Common rpmH 50S ribosomal protein L34 SMc04434 189 None None None 15966959 Common leuC isopropylmalate isomerase large subunit SMc03823 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 15965103 Common - hypothetical protein SMc01315 6 None None None 15964387 Common - hypothetical protein SMc03002 39 COG3254 COG3254, Uncharacterized conserved protein Function unknown 15964865 Common - hypothetical protein SMc02550 60 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15966080 Nonpathogen - hypothetical protein SMc01581 1 None None None 15966341 Common - hypothetical protein SMc02412 66 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 15966919 Common ctpA PUTATIVE CARBOXY-TERMINAL PROCESSING PROTEASE PRECURSOR SIGNAL PEPTIDE PROTEIN SMc03783 184 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 15964209 Nonpathogen - hypothetical protein SMc01710 23 COG4907 COG4907, Predicted membrane protein Function unknown 15964612 Common - hypothetical protein SMc00992 178 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 15964151 Common - hypothetical protein SMc01122 23 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15966709 Common - hypothetical protein SMc03137 30 COG5573 COG5573, Predicted nucleic-acid-binding protein, contains PIN domain General function prediction only 15963852 Common - PUTATIVE AMINOMETHYLTRANSFERASE PROTEIN SMc04153 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15966033 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01668 54 COG1309 AcrR, Transcriptional regulator Transcription 15965770 Common - hypothetical protein SMc04188 21 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15964405 Common fliN FLAGELLAR MOTOR SWITCH PROTEIN SMc03020 119 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 15966146 Common TRm22 PUTATIVE TRANSPOSASE PROTEIN SMc02731 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15965705 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04294 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15963815 Common glcB malate synthase G SMc02581 72 COG2225 AceB, Malate synthase Energy production and conversion 15965348 Common - hypothetical protein SMc01198 76 COG5616 COG5616, Predicted integral membrane protein Function unknown 15965412 Common ppiD PUTATIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PROTEIN SMc00234 117 None None None 15965699 Common cobA PROBABLE UROPORPHYRIN-III C-METHYLTRANSFERASE PROTEIN SMc04284 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 15965656 Common - HYPOTHETICAL DNAJ DOMAIN PROTEIN SMc04233 206 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 15965658 Common - tRNA-dihydrouridine synthase A SMc04235 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 15966156 Common - hypothetical protein SMc01535 8 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 15964691 Common - hypothetical protein SMc00028 226 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 15964346 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02286 1 None None None 15966015 Common - PUTATIVE ESTERASE/LIPASE PROTEIN SMc01650 124 COG0657 Aes, Esterase/lipase Lipid metabolism 15964979 Nonpathogen - hypothetical protein SMc01788 1 None None None 15965156 Common - PUTATIVE TRANSPORTER TRANSMEMBRANE PROTEIN SMc01261 170 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 15966155 Common - hypothetical protein SMc04457 33 COG0748 HugZ, Putative heme iron utilization protein Inorganic ion transport and metabolism 15965179 Common - hypothetical protein SMc01011 13 None None None 15966555 Common - PROBABLE 5'-NUCLEOTIDASE PRECURSOR (SIGNAL PEPTIDE) PROTEIN SMc04018 143 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 15965708 Common - PUTATIVE REGULATOR PROTEIN SMc04301 86 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 15965950 Common - PUTATIVE TRANSGLYCOSYLASE TRANSMEMBRANE PROTEIN SMc01845 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 15965674 Common - PUTATIVE MANNITOL-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN SMc04251 75 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 15965198 Common pdhAa PYRUVATE DEHYDROGENASE ALPHA2 SUBUNIT PROTEIN SMc01030 165 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 15965957 Common - hypothetical protein SMc02817 121 COG2962 RarD, Predicted permeases General function prediction only 15964556 Common - hypothetical protein SMc00930 93 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 15964945 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01754 123 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 15964507 Nonpathogen - PUTATIVE SIGNAL PEPTIDE PROTEIN SMc00809 1 None None None 15966700 Common - PUTATIVE TRANSPORT PROTEIN SMc03146 116 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 15965122 Common rpsN 30S ribosomal protein S14 SMc01296 205 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 15964400 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03015 8 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 15966763 Common fdsB PUTATIVE NAD-DEPENDENT FORMATE DEHYDROGENASE BETA SUBUNIT PROTEIN SMc02525 164 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 15964782 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02373 1 None None None 15965384 Common - hypothetical protein SMc00939 21 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 15964479 Common iolA PUTATIVE MALONIC SEMIALDEHYDE OXIDATIVE DECARBOXYLASE PROTEIN SMc00781 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15966674 Common cobJ precorrin-3B C17-methyltransferase SMc03190 121 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 15963997 Common pnp polynucleotide phosphorylase/polyadenylase SMc00324 242 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 15966138 Common - 7-cyano-7-deazaguanine reductase SMc02723 139 COG0780 COG0780, Enzyme related to GTP cyclohydrolase I General function prediction only 15964118 Common fpg formamidopyrimidine-DNA glycosylase SMc01154 177 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 15964219 Common putA bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase SMc02181 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 15965816 Nonpathogen - hypothetical protein SMc04324 2 None None None 15964171 Common - hypothetical protein SMc01102 67 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 15964002 Common irr PUTATIVE IRON RESPONSE REGULATOR PROTEIN SMc00329 155 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 15964546 Common groES co-chaperonin GroES SMc00912 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 15964066 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00393 10 COG1848 COG1848, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 15966359 Common - hypothetical protein SMc02431 56 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 15964891 Common rpsF 30S ribosomal protein S6 SMc00568 196 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 15963896 Common cpaE1 PUTATIVE RESPONSE REGULATOR PROTEIN SMc04109 58 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 15965534 Common - hypothetical protein SMc00538 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 15966024 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01659 72 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 15964231 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02169 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 161621438 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase SMc01732 141 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 15964799 Common gst7 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc02390 99 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15966188 Common rpoE2 RNA polymerase sigma factor SMc01506 169 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 15967003 Common - hypothetical protein SMc03867 42 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 15964735 Common - hypothetical protein SMc00453 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 15966984 Common ccmB PUTATIVE HEME EXPORTER B (CYTOCHROME C-TYPE BIOGENESIS PROTEIN) TRANSMEMBRANE SMc03848 81 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 15965038 Common - hypothetical protein SMc01933 12 None None None 15964693 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00029 1 None None None 15966287 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02022 61 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15963913 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02836 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15965399 Common - hypothetical protein SMc00954 70 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 15966416 Common - hypothetical protein SMc00709 66 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15965718 Common - hypothetical protein SMc04311 25 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 15965962 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01576 108 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15966447 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00678 46 COG1522 Lrp, Transcriptional regulators Transcription 15963947 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02869 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966519 Common TRm5 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc03982 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966109 Common clpS ATP-dependent Clp protease adaptor SMc02694 126 COG2127 COG2127, Uncharacterized conserved protein Function unknown 15964871 Common - hypothetical protein SMc02544 122 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 15966502 Common ruvB Holliday junction DNA helicase B SMc03965 226 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 15965392 Common glnB NITROGEN REGULATORY PROTEIN PII SMc00947 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 15966726 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03120 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 15965367 Common - PUTATIVE MULTIDRUG TRANSMEMBRANE RESISTANCE SIGNAL PEPTIDE PROTEIN SMc01179 143 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 15966547 Common - hypothetical protein SMc04010 62 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 161621437 Common ilvE2 aminotransferase SMc00042 194 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 15965876 Common hflC PUTATIVE HYDROLASE SERINE PROTEASE TRANSMEMBRANE PROTEIN SMc01440 126 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 15964753 Common - hypothetical protein SMc00118 96 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 15966195 Common smoK PROBABLE ATP-BINDING TRANSPORT ABC TRANSPORTER PROTEIN SMc01499 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966691 Common - PUTATIVE AROMATIC AMINO ACID DEGRADATION PROTEIN SMc03207 74 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 15964898 Common - hypothetical protein SMc00575 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 15963993 Common rbfA ribosome-binding factor A SMc00320 95 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 15965376 Common - hypothetical protein SMc01170 9 None None None 15966531 Common suhB PUTATIVE INOSITOL MONOPHOSPHATASE PROTEIN SMc03994 213 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 15964031 Common cfa1 PUTATIVE CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE PROTEIN SMc00358 129 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 15965286 Common surE stationary phase survival protein SurE SMc02063 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 15964483 Common rirA iron-responsive transcriptional regulator SMc00785 166 COG1959 COG1959, Predicted transcriptional regulator Transcription 15965566 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00193 1 None None None 15964630 Common mcpU PROBABLE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS) TRANSMEMBRANE PROTEIN SMc00975 153 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15966479 Common rpoH1 RNA polymerase factor sigma-32 SMc00646 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 15966564 Common gltB PROBABLE GLUTAMATE SYNTHASE NADPH LARGE CHAIN PROTEIN SMc04028 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 15966420 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00705 17 None None None 15966318 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02337 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 15964646 Common - hypothetical protein SMc00068 156 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 15965629 Common - hypothetical protein SMc00134 25 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 15965896 Common - hypothetical protein SMc01460 24 COG2128 COG2128, Uncharacterized conserved protein Function unknown 15964698 Common - HYPOTHETICAL/UNKNOWN SIGNAL PEPTIDE PROTEIN SMc00030 9 None None None 15965724 Common - methionine synthase I SMc04325 164 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 15966264 Common - PUTATIVE SUGAR-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc01977 114 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15965915 Common panC pantoate--beta-alanine ligase SMc01880 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 15966612 Common cyaG1 PUTATIVE ADENYLATE/GUANYLATE CYCLASE PROTEIN SMc03937 79 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15964574 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc00885 5 COG1873 COG1873, Uncharacterized conserved protein Function unknown 15966356 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02428 81 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15964293 Common - hypothetical protein SMc02236 48 COG1407 COG1407, Predicted ICC-like phosphoesterases General function prediction only 15965146 Common - hypothetical protein SMc01271 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 15963942 Common thiF molybdopterin biosynthesis protein MoeB SMc02864 222 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 15967026 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03890 106 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 15966795 Common - hypothetical protein SMc02493 4 None None None 15966425 Common cobS PROBABLE COBALAMIN BIOSYNTHESIS PROTEIN SMc00700 71 COG0714 COG0714, MoxR-like ATPases General function prediction only 15964318 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02261 73 COG1309 AcrR, Transcriptional regulator Transcription 15966803 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02485 5 None None None 15966955 Common - hypothetical protein SMc03819 72 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 15965380 Common - hypothetical protein SMc00935 11 COG5453 COG5453, Uncharacterized conserved protein Function unknown 15965820 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04344 1 None None None 15965748 Common - hypothetical protein SMc04166 34 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 15964286 Common fadA acetyl-CoA acetyltransferase SMc02228 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 15964815 Common - hypothetical protein SMc02422 9 None None None 15965216 Common - D-amino acid aminotransferase SMc01047 198 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 15965255 Common omp PUTATIVE OUTER MEMBRANE TRANSMEMBRANE PROTEIN SMc02094 160 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 15965075 Common - PUTATIVE OUTER MEMBRANE PROTEIN SMc01342 78 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 15965953 Common - PUTATIVE METHYLTRANSFERASE TRANSCRIPTION REGULATOR PROTEIN SMc01842 110 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15964364 Common hisD histidinol dehydrogenase SMc02307 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 15966939 Common - hypothetical protein SMc03803 101 COG2835 COG2835, Uncharacterized conserved protein Function unknown 15966876 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc03277 118 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 15964700 Common betA choline dehydrogenase SMc00093 96 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 15964829 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02648 108 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 15966842 Common - hypothetical protein SMc03241 55 COG0456 RimI, Acetyltransferases General function prediction only 15966820 Common - hypothetical protein SMc02468 20 COG3828 COG3828, Uncharacterized protein conserved in bacteria Function unknown 15966243 Common - hypothetical protein SMc01956 38 COG0400 COG0400, Predicted esterase General function prediction only 15966501 Common - hypothetical protein SMc03964 90 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 15964639 Common - PUTATIVE ACETYL-COA ACYLTRANSFERASE PROTEIN SMc00966 170 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 15965042 Common dnaE DNA polymerase III subunit alpha SMc01375 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 15964681 Common mutY PROBABLE A/G-SPECIFIC ADENINE GLYCOSYLASE PROTEIN SMc00452 219 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 15964155 Common - hypothetical protein SMc01118 141 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 15966884 Nonpathogen - HYPOTHETICAL LIPOPOTEIN PROTEIN SMc03285 1 None None None 15963793 Common - PUTATIVE PHOSPHOCARRIER HPR TRANSMEMBRANE PROTEIN SMc02754 149 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 15965271 Common exoR EXOPOLYSACCHARIDE BIOSYNTHESIS REGULATORY PROTEIN SMc02078 66 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 15964207 Common lldD2 PUTATIVE L-LACTATE DEHYDROGENASE (CYTOCHROME) PROTEIN SMc01712 116 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 15965998 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01633 173 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 15967077 Common sun HYPOTHETICAL SUN PROTEIN SMc04090 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 15964350 Common hsdR PUTATIVE TYPE I RESTRICTION ENZYME R PROTEIN SMc02292 133 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 15964374 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02315 6 None None None 15966910 Common - hypothetical protein SMc03773 108 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15966269 Common coxM PROBABLE ALTERNATIVE CYTOCHROME C OXIDASE POLYPEPTIDE II TRANSMEMBRANE PROTEIN SMc01982 139 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 15966280 Common - PUTATIVE DIOXYGENASE FERREDOXIN PROTEIN SMc01993 83 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 15965901 Common creA PUTATIVE CREA PROTEIN SMc01465 56 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 15965297 Common - hypothetical protein SMc02052 4 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 15965988 Common eriA PUTATIVE ERYTHRITOL KINASE PROTEIN SMc01623 174 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15966345 Common - N-ethylammeline chlorohydrolase SMc02416 141 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 15965498 Common rhlE1 PUTATIVE ATP-DEPENDENT RNA HELICASE PROTEIN SMc00522 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 15964355 Common TRm1b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc02329 21 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15963755 Common maf Maf-like protein SMc02792 162 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 15966631 Common - hypothetical protein SMc02986 43 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 15966865 Common - hypothetical protein SMc03259 233 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 15965505 Common - hypothetical protein SMc00515 98 COG0714 COG0714, MoxR-like ATPases General function prediction only 15964142 Common - hypothetical protein SMc01131 85 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 15964988 Common - hypothetical protein SMc01796 11 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 15966639 Common - hypothetical protein SMc03155 12 COG5607 COG5607, Uncharacterized conserved protein Function unknown 15966825 Common sdhC PROBABLE SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT TRANSMEMBRANE PROTEIN SMc02463 90 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 15965832 Common ndh PUTATIVE NADH DEHYDROGENASE TRANSMEMBRANE PROTEIN SMc04452 183 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 15965125 Common rplR 50S ribosomal protein L18 SMc01293 217 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 15964725 Common - hypothetical protein SMc00106 57 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 15965092 Common tuf elongation factor Tu SMc01326 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 15966120 Common - hypothetical protein SMc02705 32 None None None 15965163 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc01068 3 None None None 15966770 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02518 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966592 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04056 202 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15963973 Common - hypothetical protein SMc02895 106 COG0679 COG0679, Predicted permeases General function prediction only 15965549 Common - hypothetical protein SMc00477 37 COG5361 COG5361, Uncharacterized conserved protein Function unknown 15964001 Common fabA 3-hydroxydecanoyl-(acyl carrier protein) dehydratase SMc00328 82 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 15965946 Common - PUTATIVE HYDROLASE TRANSMEMBRANE PROTEIN SMc01849 73 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 15963830 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02596 170 COG0583 LysR, Transcriptional regulator Transcription 15965598 Common - hypothetical protein SMc00162 147 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 15966370 Common - PUTATIVE HYDROLASE PROTEIN SMc02442 204 COG0388 COG0388, Predicted amidohydrolase General function prediction only 15963818 Common actR TRANSCRIPTION REGULATOR PROTEIN SMc02584 207 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 15966141 Common - PUTATIVE IRON TRANSPORT PROTEIN SMc02726 116 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 15963909 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc02832 176 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15966400 Common argH1 argininosuccinate lyase SMc00725 234 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 15964459 Common - PUTATIVE GLUTAMINE SYNTHETASE PROTEIN SMc00762 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 15964304 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02247 10 None None None 15967042 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04384 192 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15965764 Nonpathogen - hypothetical protein SMc04182 1 None None None 15965184 Common - hypothetical protein SMc01016 4 None None None 15966407 Nonpathogen - hypothetical protein SMc00718 1 None None None 15966129 Common - hypothetical protein SMc02714 17 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 15967055 Common - PUTATIVE L-SORBOSONE DEHYDROGENASE, NADP DEPENDENT PROTEIN SMc04397 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15965865 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01429 199 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 15965585 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc00175 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 15964525 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc00827 142 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 15966626 Common - PUTATIVE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN SMc02981 108 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15964710 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00037 129 COG0583 LysR, Transcriptional regulator Transcription 15965135 Common - putative sulfite oxidase subunit YedZ SMc01282 77 COG2717 COG2717, Predicted membrane protein Function unknown 15966177 Common - hypothetical protein SMc01516 12 None None None 15966332 Common - PUTATIVE GLUTAMINE SYNTHETASE PROTEIN SMc02352 222 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 15964281 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02223 28 COG2932 COG2932, Predicted transcriptional regulator Transcription 15966747 Common cyaF1 PUTATIVE ADENYLATE CYCLASE PROTEIN SMc03099 37 COG5616 COG5616, Predicted integral membrane protein Function unknown 15963894 Common cpaC1 PUTATIVE PILUS ASSEMBLY TRANSMEMBRANE PROTEIN SMc04111 137 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 15966115 Common - hypothetical protein SMc02700 210 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 15965068 Common - hypothetical protein SMc01349 19 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 15965183 Common - hypothetical protein SMc01015 15 COG5330 COG5330, Uncharacterized protein conserved in bacteria Function unknown 15966335 Common - hypothetical protein SMc02355 101 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 15965818 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC PROTEIN SMc04341 12 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 15965462 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00281 2 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 15965345 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01698 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964857 Common - hypothetical protein SMc02558 106 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 15966929 Common citE PROBABLE CITRATE LYASE BETA CHAIN (CITRASE) (CITRYL-COA LYASE SUBUNIT) PROTEIN SMc03793 107 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 15965616 Common - hypothetical protein SMc00145 52 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 15966890 Common - PUTATIVE PARTIAL TRANSPOSASE PROTEIN SMc04428 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964677 Common - hypothetical protein SMc00079 137 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 15964465 Common aceA isocitrate lyase SMc00768 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 15966453 Common hisX HISTIDINE-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN SMc00672 56 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 15965481 Common radC DNA repair protein RadC SMc00299 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 15965981 Common eryC PUTATIVE D-ERYTHRULOSE-1-PHOSPHATE DEHYDROGENASE PROTEIN SMc01616 8 None None None 15965668 Common znuA PROBABLE HIGH-AFFINITY ZINC UPTAKE SYSTEM ABC TRANSPORTER PROTEIN SMc04245 126 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 15965811 Nonpathogen - hypothetical protein SMc04319 2 None None None 15966521 Common - hypothetical protein SMc03984 117 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 15966941 Common tesB PROBABLE ACYL-COA THIOESTERASE II PROTEIN SMc03805 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 15967038 Common - hypothetical protein SMc04381 34 COG4645 COG4645, Uncharacterized protein conserved in bacteria Function unknown 15965215 Common trkA potassium transporter peripheral membrane component SMc01046 152 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 15964288 Common - hypothetical protein SMc02230 34 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15965845 Nonpathogen - hypothetical protein SMc01411 3 None None None 15965230 Common aapQ PROBABLE GENERAL L-AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN SMc02119 172 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15966164 Common dppC2 PUTATIVE DIPEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc01527 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965931 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SMc01864 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 15964931 Common dmsA PUTATIVE ANAEROBIC DIMETHYL SULFOXIDE REDUCTASE CHAIN A PROTEIN SMc00609 178 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 15965789 Common - PUTATIVE TOXIN SECRETION TRANSMEMBRANE PROTEIN SMc04208 109 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 15967014 Common phbB ACETOACETYL-COA REDUCTASE PROTEIN SMc03878 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15965469 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00287 37 None None None 15966384 Common - PUTATIVE FATTY-ACID-COA LIGASE PROTEIN SMc00741 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 15965434 Common - hypothetical protein SMc00254 8 None None None 15965095 Common secE preprotein translocase subunit SecE SMc01323 31 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 15965045 Common - hypothetical protein SMc01372 21 None None None 15966308 Common eda1 PROBABLE KHG/KDPG ALDOLASE (INCLUDES: 4-HYDROXY-2-OXOGLUTARATE ALDOLASE, 2-DEHYDRO-3-DEOXYPHOSPHOGLUCONATE ALDOLASE) PROTEIN SMc02043 111 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 15964165 Common trmB tRNA (guanine-N(7))-methyltransferase SMc01108 171 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 15965970 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc01605 50 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 15966440 Common - hypothetical protein SMc00684 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 15964924 Common uvrC excinuclease ABC subunit C SMc00602 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 15967058 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04400 168 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15965263 Common - hypothetical protein SMc02086 155 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 15965808 Common afuB PROBABLE FERRIC IRON TRANSPORT SYSTEM PERMEASE PROTEIN SMc04316 217 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 15964381 Common - short chain dehydrogenase SMc02322 232 COG3347 COG3347, Uncharacterized conserved protein Function unknown 15966859 Common proB2 gamma-glutamyl kinase SMc03252 193 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 15964227 Common - hypothetical protein SMc02173 33 COG4154 FucU, Fucose dissimilation pathway protein FucU Carbohydrate transport and metabolism 15964746 Common phaB2 putative monovalent cation/H+ antiporter subunit B SMc00052 92 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 15965351 Common - PUTATIVE PARTIAL TRANSPOSASE PROTEIN SMc01195 33 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 15965714 Common cyaD2 PUTATIVE ADENYLATE/GUANYLATE CYCLASE TRANSMEMBRANE PROTEIN SMc04307 88 COG4252 COG4252, Predicted transmembrane sensor domain Signal transduction mechanisms 15964937 Common purM phosphoribosylaminoimidazole synthetase SMc00615 226 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 15965452 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc00271 99 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 15966900 Nonpathogen - hypothetical protein SMc03762 2 None None None 15964038 Common pheS phenylalanyl-tRNA synthetase subunit alpha SMc00365 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 15965031 Common nuoM NADH dehydrogenase subunit M SMc01926 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 15965389 Common - hypothetical protein SMc00944 165 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 15966018 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc01653 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 15965236 Common cysE PROBABLE SERINE ACETYLTRANSFERASE PROTEIN SMc02113 214 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 15965358 Common dac PUTATIVE PENICILLIN-BINDING PRECURSOR (D-ALANYL-D-ALANINE CARBOXYPEPTIDASE FRACTION A) TRANSMEMBRANE PROTEIN SMc01188 146 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 15964046 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00373 7 None None None 15965200 Common pdhB DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE PROTEIN SMc01032 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15964449 Common aglF ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03062 142 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15964580 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00879 107 COG1414 IclR, Transcriptional regulator Transcription 15964198 Common rnpA ribonuclease P SMc01720 55 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 15966779 Common sitA PUTATIVE IRON-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc02509 166 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 15964461 Nonpathogen - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc00764 1 None None None 15965681 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04258 149 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15966419 Common - hypothetical protein SMc00706 83 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15965552 Common recA recombinase A SMc00760 226 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 15964025 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc00352 31 COG0456 RimI, Acetyltransferases General function prediction only 15964748 Common phaD2 putative monovalent cation/H+ antiporter subunit D SMc00054 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 15966490 Common - hypothetical protein SMc02941 82 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 15964614 Common fsr PUTATIVE FOSMIDOMYCIN RESISTANCE ANTIBIOTIC RESISTANCE TRANSMEMBRANE PROTEIN SMc00990 141 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964775 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02366 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15965115 Common rpsC 30S ribosomal protein S3 SMc01303 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 15964095 Common - PUTATIVE AMINO ACID EFFLUX PROTEIN SMc00423 110 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15966326 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02345 196 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 15966044 Nonpathogen - hypothetical protein SMc01547 2 None None None 15963960 Common - CysZ-like protein SMc02882 25 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 15965979 Common tpiA triosephosphate isomerase SMc01614 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 15963804 Common hisF imidazole glycerol phosphate synthase subunit HisF SMc02569 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 15965082 Common amiC PROBABLE N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMIC PRECURSOR TRANSMEMBRANE PROTEIN SMc01335 163 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 15965077 Common - PUTATIVE AMINOTRANSFERASE PROTEIN SMc01340 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15964728 Common - PUTATIVE AMINO ACID EFFLUX PROTEIN SMc00044 121 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15964649 Common - hypothetical protein SMc00002 6 None None None 15964115 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01157 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966382 Common - hypothetical protein SMc00743 49 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 15964769 Common lppA PROBABLE OUTER-MEMBRANNE LIPOPROTEIN SMc00067 12 COG4520 LipA, Surface antigen Cell envelope biogenesis, outer membrane 15965314 Common - PUTATIVE TRANSGLYCOSYLASE TRANSMEMBRANE PROTEIN SMc01230 38 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 15966007 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc01642 199 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15964904 Common - hypothetical protein SMc00581 28 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 15964653 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00070 6 None None None 15966753 Common - hypothetical protein SMc03093 33 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 15966711 Common - PUTATIVE AMINO-ACID TRANSPORT SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc03135 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 15967036 Common ndvA BETA-1-->2GLUCAN EXPORT ATP-BINDING PROTEIN SMc03900 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15966732 Common TRm3 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM3 SMc03114 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966135 Common clpP2 ATP-dependent Clp protease proteolytic subunit SMc02720 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15965887 Common - hypothetical protein SMc01451 17 None None None 15964592 Common rnhB ribonuclease HII SMc00867 207 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 15966405 Common - PUTATIVE 2-COMPONENT RECEIVER DOMAIN PROTEIN SMc00720 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15964217 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01702 202 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15964964 Common ribE riboflavin synthase subunit alpha SMc01773 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 15963856 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04149 63 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 15964397 Common cheD PROBABLE CHEMOTAXIS PROTEIN SMc03012 87 COG1871 CheD, Chemotaxis protein; stimulates methylation of MCP proteins Cell motility and secretion / Signal transduction mechanisms 15966703 Common - hypothetical protein SMc03143 14 None None None 15964915 Common - hypothetical protein SMc00593 38 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 15967070 Common - PUTATIVE MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE SIGNAL PEPTIDE PROTEIN SMc04411 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 15964078 Common - hypothetical protein SMc00405 113 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15963772 Common - PUTATIVE L-FUCOSE DEHYDROGENASE (D-THREO ALDOSE 1-DEHYDROGENASE) PROTEIN SMc02775 156 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15963868 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04137 149 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15964058 Common - hypothetical protein SMc00385 115 COG2606 EbsC, Uncharacterized conserved protein Function unknown 15964086 Common - hypothetical protein SMc00413 15 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 15966221 Common - hypothetical protein SMc01995 27 COG4737 COG4737, Uncharacterized protein conserved in bacteria Function unknown 15966038 Common - hypothetical protein SMc01541 44 COG1944 COG1944, Uncharacterized conserved protein Function unknown 15967049 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase SMc04391 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15963763 Common - hypothetical protein SMc02784 75 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 15964071 Common - hypothetical protein SMc00460 24 COG3490 COG3490, Uncharacterized protein conserved in bacteria Function unknown 15964958 Common - hypothetical protein SMc01767 13 None None None 15965324 Common lpsE PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE PROTEIN SMc01220 216 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 15964335 Nonpathogen - HYPOTHETICAL UNKNOWN TRANSMEMBRANE PROTEIN SMc02278 1 None None None 15964665 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase SMc00016 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 15966459 Nonpathogen - hypothetical protein SMc00666 3 None None None 15965022 Common nuoE1 NADH dehydrogenase subunit E SMc01917 154 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 15966772 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02516 162 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15966196 Common smoG PROBABLE SORBITOL/MANNITOL TRANSPORT INNER MEMBRANE PROTEIN SMc01498 163 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15965143 Common ccrB camphor resistance protein CrcB SMc01274 187 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 15965246 Common - hypothetical protein SMc02103 90 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 15967093 Common - hypothetical protein SMc02795 96 COG1981 COG1981, Predicted membrane protein Function unknown 15966214 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01828 176 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 15966974 Common - hypothetical protein SMc03838 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 15966793 Common - putative translaldolase SMc02495 154 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 15964766 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00065 4 None None None 15966666 Common phaE1 PH ADAPTATION POTASSIUM EFFLUX SYSTEM E TRANSMEMBRANE PROTEIN SMc03182 37 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 15966837 Common - glutamine amidotransferase SMc03236 123 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 15965683 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04260 105 COG1609 PurR, Transcriptional regulators Transcription 15965855 Common rpoE1 PROBABLE RNA POLYMERASE SIGMA FACTOR PROTEIN SMc01419 146 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 15966832 Common hemC porphobilinogen deaminase SMc03231 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 15964242 Common - hypothetical protein SMc02157 207 COG4589 COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase General function prediction only 15966000 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01635 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966688 Common lpdA3 dihydrolipoamide dehydrogenase SMc03204 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15963827 Common - hypothetical protein SMc02593 4 None None None 15965512 Common purB adenylosuccinate lyase SMc00508 235 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 15965150 Common - hypothetical protein SMc01267 69 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 15965058 Common aidB PUTATIVE OXIDOREDUCTASE PROTEIN SMc01359 148 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 15964576 Common - hypothetical protein SMc00883 61 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 15963759 Common secB preprotein translocase subunit SecB SMc02788 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 15963863 Common - hypothetical protein SMc04142 70 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 15965089 Common acpD PROBABLE ACYL CARRIER PROTEIN PHOSPHODIESTERASE SMc01329 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 15966721 Common - PUTATIVE TRANSPORT SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc03125 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964470 Common potI PROBABLE PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN SMc00773 191 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 15967083 Common - hypothetical protein SMc02812 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 15964606 Common - hypothetical protein SMc00853 131 COG1704 LemA, Uncharacterized conserved protein Function unknown 15964831 Common - hypothetical protein SMc02646 80 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 15964457 Common zwf glucose-6-phosphate 1-dehydrogenase SMc03070 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 15964498 Nonpathogen - hypothetical protein SMc00800 1 COG5373 COG5373, Predicted membrane protein Function unknown 15965781 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04200 1 None None None 15964658 Common ctaD PUTATIVE CYTOCHROME C OXIDASE POLYPEPTIDE I TRANSMEMBRANE PROTEIN SMc00010 170 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 15965794 Common - hypothetical protein SMc04271 110 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 15966812 Common - hypothetical protein SMc02476 66 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 15964706 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00034 184 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 15966166 Common dppA2 PUTATIVE DIPEPTIDE BINDING PERIPLASMIC PROTEIN SMc01525 207 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966585 Common - PUTATIVE SULFITE OXIDASE PROTEIN SMc04049 65 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 15966749 Common - hypothetical protein SMc03097 141 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 15964109 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01163 148 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15964378 Common - HYPOTHETICAL UNKNOWN PROTEIN SMc02319 2 None None None 15964004 Common - hypothetical protein SMc00331 80 COG1434 COG1434, Uncharacterized conserved protein Function unknown 15966056 Nonpathogen - hypothetical protein SMc01552 1 None None None 15964474 Common - PUTATIVE SENSOR HISTIDINE KINASE PROTEIN SMc00776 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15963872 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04133 90 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15966964 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03828 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 15964367 Common infA translation initiation factor IF-1 SMc02310 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 15964848 Common nadB L-aspartate oxidase SMc02599 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 15966917 Common - hypothetical protein SMc03781 167 COG1576 COG1576, Uncharacterized conserved protein Function unknown 15964675 Common - hypothetical protein SMc00020 9 None None None 15964122 Common - hypothetical protein SMc01151 38 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 15965405 Common - hypothetical protein SMc00227 30 COG2938 COG2938, Uncharacterized conserved protein Function unknown 15963900 Common TRm22 PUTATIVE TRANSPOSASE PROTEIN SMc02823 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15965952 Common metF PROBABLE 5,10-METHYLENETETRAHYDROFOLATE REDUCTASE OXIDOREDUCTASE PROTEIN SMc01843 146 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 15964824 Common lepB PROBABLE SIGNAL PEPTIDASE I TRANSMEMBRANE PROTEIN SMc02653 212 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 15964403 Common flhB flagellar biosynthesis protein FlhB SMc03018 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 15965365 Nonpathogen - PUTATIVE TRANSMEMBRANE PROTEIN SMc01181 1 None None None 15964883 Common - hypothetical protein SMc00560 12 COG4541 COG4541, Predicted membrane protein Function unknown 15966144 Common - hypothetical protein SMc02729 21 COG5345 COG5345, Uncharacterized protein conserved in bacteria Function unknown 15966672 Common cobL PROBABLE PRECORRIN-6Y C5,15-METHYLTRANSFERASE (DECARBOXYLATING) PROTEIN SMc03188 103 COG2241 CobL, Precorrin-6B methylase 1 Coenzyme metabolism 15965177 Common - hypothetical protein SMc01009 19 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 15964173 Common fmt methionyl-tRNA formyltransferase SMc01100 218 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 15964413 Common flgC flagellar basal body rod protein FlgC SMc03028 125 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 15965934 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase SMc01861 213 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 15966718 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03128 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964068 Common pfs 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SMc00395 45 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 15964968 Common ribH riboflavin synthase subunit beta SMc01777 207 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 15964211 Common - hypothetical protein SMc01708 111 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 15963813 Common - PUTATIVE CYTOCHROME P450 MONOOXYGENASE PROTEIN SMc02579 76 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 15965959 Common - hypothetical protein SMc01573 41 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 15966702 Common - hypothetical protein SMc03144 10 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15965568 Common - hypothetical protein SMc00191 3 None None None 15966761 Common fdsC formate dehydrogenase accessory protein SMc03085 131 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 15964501 Common - hypothetical protein SMc00803 29 COG4312 COG4312, Uncharacterized protein conserved in bacteria Function unknown 15963833 Nonpathogen - hypothetical protein SMc02602 1 None None None 15964239 Common - PUTATIVE PERMEASE TRANSMEMBRANE TRANSPORT PROTEIN SMc02160 117 COG0628 PerM, Predicted permease General function prediction only 15965426 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase SMc00316 129 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 15966343 Common - PUTATIVE HYDROLASE PROTEIN SMc02414 157 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 15963845 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02615 3 None None None 15966882 Common TRm18 PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ISRM18 SMc03283 15 None None None 15965504 Common - hypothetical protein SMc00516 48 COG3552 CoxE, Protein containing von Willebrand factor type A (vWA) domain General function prediction only 15965520 Common - hypothetical protein SMc00500 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 15965727 Common - HYPOTHETICAL LIPOPROTEIN SIGNAL PEPTIDE SMc04328 24 COG3698 COG3698, Predicted periplasmic protein Function unknown 15965557 Common dksA PUTATIVE DNAK SUPPRESOR PROTEIN SMc00469 118 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 15964554 Common - hypothetical protein SMc00904 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 15965192 Common secG preprotein translocase subunit SecG SMc01024 9 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 15965678 Common manB PUTATIVE BETA-MANNOSIDASE PROTEIN SMc04255 41 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 15964544 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00914 214 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 15964185 Nonpathogen - hypothetical protein SMc01089 2 COG3152 COG3152, Predicted membrane protein Function unknown 15964012 Common cyaA ADENYLATE CYCLASE 1 PROTEIN SMc00339 103 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15964515 Common - PUTATIVE CARBOXYMETHYLENEBUTENOLIDASE (DIENELACTONE HYDROLASE) PROTEIN SMc00817 119 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 15966258 Common - PUTATIVE ALDEHYDE DEHYDROGENASE PROTEIN SMc01971 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15964780 Common - hypothetical protein SMc02371 103 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15963887 Common - hypothetical protein SMc04118 14 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 15966282 Common - hypothetical protein SMc02017 21 COG3000 ERG3, Sterol desaturase Lipid metabolism 15966136 Common - PUTATIVE OUTER MEMBRANE RECEPTOR PROTEIN SMc02721 66 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 15965730 Common mtbC PUTATIVE DIMETHYLAMINE CORRINOID PROTEIN SMc04331 165 COG5012 COG5012, Predicted cobalamin binding protein General function prediction only 15965278 Common - PUTATIVE HYDROLASE GLYCOSIDASE PROTEIN SMc02071 169 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 15966236 Common livG PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc01949 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 15964708 Common - hypothetical protein SMc00035 46 COG4448 AnsA, L-asparaginase II Amino acid transport and metabolism 15965003 Common TRm20N PUTATIVE PARTIAL TRANSPOSASE PROTEIN SMc04433 15 None None None 15964808 Common TRm11b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc02399 48 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964878 Common cvpA PUTATIVE COLICIN V PRODUCTION HOMOLOG TRANSMEMBRANE PROTEIN SMc00555 58 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 15964534 Common - hypothetical protein SMc00924 87 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15966889 Common - hypothetical protein SMc03290 5 None None None 15964662 Common ctaE PUTATIVE CYTOCHROME C OXIDASE SUBUNIT III TRANSMEMBRANE PROTEIN SMc00013 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 15966026 Nonpathogen - PUTATIVE METHYLTRANSFERASE PROTEIN SMc01661 12 COG5598 COG5598, Trimethylamine:corrinoid methyltransferase Coenzyme metabolism 15966267 Common - PUTATIVE SUGAR TRANSPORT SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc01980 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15965754 Common cyaH PROBABLE ADENYLATE/GUANYLATE CYCLASE PROTEIN SMc04172 81 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15966572 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04036 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15964428 Common motC chemotaxis protein SMc03043 11 None None None 15964100 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc00428 76 COG2962 RarD, Predicted permeases General function prediction only 15965448 Common - hypothetical protein SMc00267 15 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15964343 Nonpathogen - hypothetical protein SMc02326 1 None None None 15964797 Nonpathogen - HYPOTHETICAL UNKNOWN TRANSMEMBRANE PROTEIN SMc02388 1 None None None 15966481 Common purA adenylosuccinate synthetase SMc00643 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 15966393 Common - hypothetical protein SMc00732 12 None None None 15965472 Common gloA PROBABLE LACTOYLGLUTATHIONE LYASE METHYLGLYOXALASE PROTEIN SMc00290 123 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15966439 Common - hypothetical protein SMc00686 23 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 15965524 Common - hypothetical protein SMc00496 26 COG5467 COG5467, Uncharacterized conserved protein Function unknown 15965578 Common - PUTATIVE TRANSPORT PROTEIN TRANSMEMBRANE SMc00196 23 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966893 Common TRm1a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc03295 31 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965470 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00288 86 COG1430 COG1430, Uncharacterized conserved protein Function unknown 15964324 Common - hypothetical protein SMc02267 173 COG1959 COG1959, Predicted transcriptional regulator Transcription 15966488 Common ftsH PROBABLE METALLOPROTEASE TRANSMEMBRANE PROTEIN SMc04459 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 15966010 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc01645 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15964421 Common fliP flagellar biosynthesis protein FliP SMc03036 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 15965353 Common - hypothetical protein SMc01193 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 15964863 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02552 1 None None None 15964275 Common metZ O-succinylhomoserine sulfhydrylase SMc02217 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 15966643 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03159 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 15963962 Common - PUTATIVE LIPOPROTEIN PRECURSOR SMc02884 107 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 15966077 Common - hypothetical protein SMc01577 7 None None None 15965583 Common - hypothetical protein SMc00177 24 COG3218 COG3218, ABC-type uncharacterized transport system, auxiliary component General function prediction only 15965604 Common - hypothetical protein SMc00157 5 None None None 15964430 Common - hypothetical protein SMc03045 44 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 15963991 Common - hypothetical protein SMc02913 42 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 15963924 Common - PUTATIVE SUGAR KINASE PROTEIN SMc02846 93 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 15965229 Common aapM PROBABLE GENERAL L-AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN SMc02120 182 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15965627 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00136 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964130 Common hrcA heat-inducible transcription repressor SMc01143 151 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 15965733 Common - PUTATIVE FORMYLTRANSFERASE PROTEIN SMc04334 29 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 15964253 Common - hypothetical protein SMc02154 37 COG1743 COG1743, Adenine-specific DNA methylase containing a Zn-ribbon DNA replication, recombination, and repair 15964312 Common qxtA PUTATIVE QUINOL OXIDASE SUBUNIT I TRANSMEMBRANE PROTEIN SMc02255 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 15965477 Common - hypothetical protein SMc00295 3 None None None 15966358 Common TRm17 PUTATIVE TRANSPOSASE FOR ISRM17 PROTEIN SMc02430 14 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 15965634 Common - hypothetical protein SMc04211 42 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 15963847 Nonpathogen - hypothetical protein SMc02617 2 None None None 15964770 Common cycH CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN SMc02361 72 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 15965419 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00241 109 COG2186 FadR, Transcriptional regulators Transcription 15966063 Common - hypothetical protein SMc01559 134 COG0432 COG0432, Uncharacterized conserved protein Function unknown 15965333 Common - hypothetical protein SMc01211 177 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 15965479 Common sfsA sugar fermentation stimulation protein A SMc00297 107 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 15965165 Common - hypothetical protein SMc00997 9 None None None 15964531 Common glcE PROBABLE GLYCOLATE OXIDASE SUBUNIT PROTEIN SMc00833 156 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15965842 Nonpathogen - PUTATIVE LIPOPROTEIN TRANSMEMBRANE SMc01410 1 COG3134 COG3134, Predicted outer membrane lipoprotein Function unknown 15965218 Common hflX PUTATIVE GTP-BINDING PROTEIN SMc01049 219 COG2262 HflX, GTPases General function prediction only 15965483 Common - hypothetical protein SMc00301 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 15965158 Common - hypothetical protein SMc01259 50 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 15965060 Nonpathogen - hypothetical protein SMc01357 1 None None None 15966650 Common - hypothetical protein SMc03166 6 COG5555 COG5555, Cytolysin, a secreted calcineurin-like phosphatase Cell motility and secretion 161621429 Common gltD glutamate synthase subunit beta SMc04026 185 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 15964384 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02325 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 15964456 Common pgl 6-phosphogluconolactonase SMc03069 103 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 15965186 Common parE DNA topoisomerase IV subunit B SMc01018 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 15963885 Common add adenosine deaminase SMc04120 107 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 15965047 Common pleD response regulator PleD SMc01370 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 15965617 Common moaA molybdenum cofactor biosynthesis protein A SMc00144 200 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 15966378 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein SMc02450 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 15966856 Common - hypothetical protein SMc03751 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966996 Common rimM 16S rRNA-processing protein SMc03860 120 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 15964740 Common - hypothetical protein SMc00048 49 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 15965813 Common gst10 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc04321 103 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15966491 Common pal PROBABLE PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PRECURSOR SMc02942 147 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 15965684 Nonpathogen - hypothetical protein SMc04261 2 None None None 15966017 Common - PUTATIVE ABC TRANSPORTER PROTEIN SMc01652 118 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 15964488 Common dppF1 PROBABLE DIPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc00790 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15966441 Common - hypothetical protein SMc00685 9 None None None 15964313 Common hipO2 PUTATIVE HIPPURATE HYDROLASE PROTEIN SMc02256 171 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 15966245 Common TRm1b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc01994 72 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964559 Common kefB1 PROBABLE GLUTATHIONE-REGULATED POTASSIUM-EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc00898 202 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 15966204 Common cyaC PUTATIVE ADENYLATE CYCLASE TRANSMEMBRANE PROTEIN SMc01818 85 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15966030 Common - hypothetical protein SMc01665 16 COG4425 COG4425, Predicted membrane protein Function unknown 15964709 Common gst1 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc00036 99 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15965164 Common - hypothetical protein SMc00996 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 15963841 Common glxC PUTATIVE OXIDOREDUCTASE PROTEIN SMc02611 63 COG0070 GltB, Glutamate synthase domain 3 Amino acid transport and metabolism 15964939 Common - hypothetical protein SMc00617 59 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15964720 Common tam PROBABLE TRANS-ACONITATE METHYLTRANSFERASE PROTEIN SMc00225 63 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 15965299 Common tig trigger factor SMc02050 214 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 15964093 Common cysK1 PROBABLE CYSTEINE SYNTHASE A (O-ACETYLSERINE SULFHYDRYLASE A) PROTEIN SMc00421 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 15963915 Common gpmA phosphoglyceromutase SMc02838 180 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 15966789 Common atpA F0F1 ATP synthase subunit alpha SMc02499 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 15963805 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase SMc02570 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 15963906 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02829 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 15966777 Common - hypothetical protein SMc02511 86 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15966584 Nonpathogen - PUTATIVE CYTOCHROME C PROTEIN SMc04048 8 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 15967057 Common - PUTATIVE ACYL-COA TRANSFERASE PROTEIN SMc04399 73 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 15964607 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc00852 12 COG4907 COG4907, Predicted membrane protein Function unknown 15966285 Common - PUTATIVE ATP BINDING ABC TRANSPORTER PROTEIN SMc02020 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 15966963 Common - PUTATIVE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN SMc03827 121 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15967037 Common - hypothetical protein SMc03901 12 None None None 15964047 Common - PUTATIVE OXIDOREDUCTASE TRANSMEMBRANE PROTEIN SMc00374 200 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15966594 Common - hypothetical protein SMc04058 97 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 15965548 Common - hypothetical protein SMc00478 40 COG5361 COG5361, Uncharacterized conserved protein Function unknown 15964040 Common - hypothetical protein SMc00367 11 None None None 15964144 Common lspA PROBABLE LIPOPROTEIN SIGNAL PEPTIDASE TRANSMEMBRANE SMc01129 191 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 15964196 Common - GTPase EngB SMc01722 180 COG0218 COG0218, Predicted GTPase General function prediction only 15965305 Common TRm5 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc01240 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965728 Nonpathogen - hypothetical protein SMc04329 12 COG1145 NapF, Ferredoxin Energy production and conversion 15966655 Common - hypothetical protein SMc03171 108 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 15965721 Nonpathogen - hypothetical protein SMc04313 1 None None None 15964873 Common - PROBABLE ABC TRANSPORTER ATP-BINDING TRANSMEMBRANE PROTEIN SMc00550 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 15966551 Common - hypothetical protein SMc04014 37 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 15965432 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00252 1 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 15964526 Common - hypothetical protein SMc00828 28 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 15965362 Common - hypothetical protein SMc01184 42 COG5361 COG5361, Uncharacterized conserved protein Function unknown 15965753 Common - PUTATIVE HEMOLYSIN-TYPE CALCIUM-BINDING PROTEIN SMc04171 98 None None None 15964200 Common mcpT PROBABLE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS) TRANSMEMBRANE PROTEIN SMc01719 163 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15964295 Common - hypothetical protein SMc02238 131 COG1959 COG1959, Predicted transcriptional regulator Transcription 15965805 Nonpathogen - hypothetical protein SMc04298 3 None None None 15965427 Common - hypothetical protein SMc00317 80 COG0679 COG0679, Predicted permeases General function prediction only 15964816 Common - hypothetical protein SMc02407 64 COG1432 COG1432, Uncharacterized conserved protein Function unknown 15964069 Common - hypothetical protein SMc00396 56 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 15966748 Common - hypothetical protein SMc03098 123 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15966037 Nonpathogen - hypothetical protein SMc01540 1 None None None 15965090 Common - hypothetical protein SMc01328 5 None None None 15967016 Common - hypothetical protein SMc03880 65 COG5394 COG5394, Uncharacterized protein conserved in bacteria Function unknown 15964751 Common phaG2 putative monovalent cation/H+ antiporter subunit G SMc00057 99 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 15964283 Common - hypothetical protein SMc02225 122 COG1733 COG1733, Predicted transcriptional regulators Transcription 15964801 Common - hypothetical protein SMc02392 17 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 15965691 Common - PUTATIVE DEHYDROGENASE PROTEIN SMc04270 206 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 15964225 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02175 160 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 15965882 Nonpathogen - hypothetical protein SMc01446 2 None None None 15964727 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00107 97 COG2378 COG2378, Predicted transcriptional regulator Transcription 15965343 Nonpathogen - PUTATIVE LIPOPROTEIN SMc01202 4 None None None 15966402 Common lysA PROBABLE DIAMINOPIMELATE DAP DECARBOXYLASE PROTEIN SMc00723 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 15965592 Common - PUTATIVE AUTOINDUCER SYNTHASE PROTEIN SMc00168 28 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 15966638 Common - hypothetical protein SMc03154 46 COG2954 COG2954, Uncharacterized protein conserved in bacteria Function unknown 15964552 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc00906 98 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 15966323 Common tkt1 transketolase SMc02342 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 15964747 Common phaC2 putative monovalent cation/H+ antiporter subunit C SMc00053 60 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 15963835 Common soxG PUTATIVE SARCOSINE OXIDASE GAMMA SUBUNIT PROTEIN SMc02605 18 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 15966197 Common smoF PROBABLE SORBITOL/MANNITOL TRANSPORT INNER MEMBRANE TRANSMEMBRANE PROTEIN SMc01497 168 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15965868 Common - hypothetical protein SMc01432 76 COG0433 COG0433, Predicted ATPase General function prediction only 15965377 Common ald PROBABLE ALANINE DEHYDROGENASE OXIDOREDUCTASE PROTEIN SMc01169 167 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 15965277 Common - hypothetical protein SMc02072 17 None None None 15964145 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc01128 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15964715 Common - hypothetical protein SMc00040 101 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 15965019 Common nuoC1 NADH dehydrogenase subunit C SMc01914 178 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 15964154 Common - hypothetical protein SMc01119 95 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 15965646 Common - hypothetical protein SMc04223 14 None None None 15966255 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01968 143 COG0583 LysR, Transcriptional regulator Transcription 15964140 Common - hypothetical protein SMc01133 15 None None None 15965468 Common - HYPOTHETICAL HEMOLYSIN-TYPE CALCIUM-BINDING PROTEIN SMc00286 49 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 15964949 Common groEL chaperonin GroEL SMc01758 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15966769 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02519 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15965866 Common ilvH acetolactate synthase 3 regulatory subunit SMc01430 188 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 15966262 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01975 125 COG2186 FadR, Transcriptional regulators Transcription 15967075 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase SMc04088 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 15966864 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03258 129 COG1802 GntR, Transcriptional regulators Transcription 15965140 Common - hypothetical protein SMc01277 33 COG5387 COG5387, Chaperone required for the assembly of the mitochondrial F1-ATPase Posttranslational modification, protein turnover, chaperones 15966106 Common - PUTATIVE MEMBRANE TRANSPORT PROTEIN SMc02691 59 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 15964738 Common ptrB PROBABLE PROTEASE II OLIGOPEPTIDASE B HYDROLASE SERINE PROTEASE PROTEIN SMc00114 107 COG1770 PtrB, Protease II Amino acid transport and metabolism 15966606 Common soxA2 PUTATIVE SARCOSINE OXIDASE ALPHA SUBUNIT TRANSMEMBRANE PROTEIN SMc03931 181 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15965109 Common rplC 50S ribosomal protein L3 SMc01309 217 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 15965665 Common zur PUTATIVE ZINC UPTAKE REGULATION PROTEIN SMc04242 93 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 15964703 Common betI transcriptional regulator BetI SMc00095 66 COG1309 AcrR, Transcriptional regulator Transcription 15965037 Common - hypothetical protein SMc01932 19 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 15966710 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03136 3 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 15963972 Nonpathogen - hypothetical protein SMc02894 1 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 15964420 Common fliL FLAGELLAR TRANSMEMBRANE PROTEIN SMc03035 11 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 15966366 Common lysC aspartate kinase SMc02438 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 15963951 Common - PUTATIVE PERIPLASMIC BINDING (SIGNAL PEPTIDE) ABC TRANSPORTER PROTEIN SMc02873 68 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15965370 Common - hypothetical protein SMc01176 12 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 15964060 Common tatA aromatic amino acid aminotransferase SMc00387 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15964893 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00570 201 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15965826 Nonpathogen - PUTATIVE GLYCINE-RICH PROTEIN SMc04357 1 COG4907 COG4907, Predicted membrane protein Function unknown 15963825 Common - hypothetical protein SMc02591 2 None None None 15967008 Common - hypothetical protein SMc03872 130 COG4784 COG4784, Putative Zn-dependent protease General function prediction only 15965792 Common - hypothetical protein SMc04441 43 COG1724 COG1724, Predicted periplasmic or secreted lipoprotein Cell motility and secretion 15964366 Common - PUTATIVE ARSENATE REDUCTASE PROTEIN SMc02309 71 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 15966528 Common - PROBABLE ABC TRANSPORTER ATP-BINDING TRANSMEMBRANE PROTEIN SMc03991 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15965241 Common - hypothetical protein SMc02108 10 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 15965835 Common - hypothetical protein SMc01493 143 COG1733 COG1733, Predicted transcriptional regulators Transcription 15966605 Common soxG2 PUTATIVE SARCOSINE OXIDASE GAMMA SUBUNIT PROTEIN SMc03930 24 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 15965102 Common rpoC DNA-directed RNA polymerase subunit beta' SMc01316 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 15965648 Common - hypothetical protein SMc04225 37 COG3921 COG3921, Uncharacterized protein conserved in bacteria Function unknown 15965745 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04163 184 COG0583 LysR, Transcriptional regulator Transcription 15966339 Common - PUTATIVE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN SMc02359 161 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 15965009 Common clpX ATP-dependent protease ATP-binding subunit SMc01904 220 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 15966127 Common - hypothetical protein SMc02712 29 COG1409 Icc, Predicted phosphohydrolases General function prediction only 15966916 Common - hypothetical protein SMc03780 200 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 15964565 Common lpxK tetraacyldisaccharide 4'-kinase SMc00892 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 15964098 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase SMc00461 179 COG0756 Dut, dUTPase Nucleotide transport and metabolism 15965447 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc00266 125 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 15964193 Common - hypothetical protein SMc01725 26 COG5343 COG5343, Uncharacterized protein conserved in bacteria Function unknown 15966538 Common purE PROBABLE PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE CATALYTIC SUBUNIT PROTEIN SMc04001 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 15964344 Common rnhA2 PROBABLE RIBONUCLEASE HI PROTEIN SMc02327 182 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 15966840 Common ppa inorganic pyrophosphatase SMc03239 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 15966396 Common etfB1 PUTATIVE ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT BETA-ETF FLAVOPROTEIN SMALL SUBUNIT SMc00729 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 15964695 Common cysN PUTATIVE SULFATE ADENYLATE TRANSFERASE CYSTEINE BIOSYNTHESIS PROTEIN SMc00090 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 15965336 Common ppiA PUTATIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A SIGNAL PEPTIDE PROTEIN SMc01700 197 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 15964418 Common - hypothetical protein SMc03033 15 COG3334 COG3334, Uncharacterized conserved protein Function unknown 15964687 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00084 3 None None None 15966111 Common - hypothetical protein SMc02696 56 COG2030 MaoC, Acyl dehydratase Lipid metabolism 15967082 Common - PUTATIVE ACYL-COA SYNTHETASE PROTEIN SMc04095 216 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 15966869 Common - PUTATIVE DIPEPTIDASE PROTEIN SMc03264 103 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 15964270 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein SMc02138 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 15965235 Common - hypothetical protein SMc02114 156 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15964036 Common rpmI 50S ribosomal protein L35 SMc00363 82 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 15966839 Common - hypothetical protein SMc03238 104 COG0762 COG0762, Predicted integral membrane protein Function unknown 15966303 Common gldA glycerol dehydrogenase SMc02038 74 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 15966450 Common - hypothetical protein SMc00675 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 15964266 Common pstB PROBABLE PHOSPHATE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02142 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 15964167 Common - PROBABLE SMALL HEAT SHOCK PROTEIN SMc01106 65 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 15965454 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc00273 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 15964914 Common - HYPOTHETICAL, TRANSMEMBRANE PROTEIN SMc00592 209 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15966879 Common ISRm28.3 PUTATIVE TRANSPOSASE NUMBER 3 FOR INSERTION SEQUENCE ISRM28 SMc03280 51 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 15967024 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase SMc03888 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 15964859 Common - hypothetical protein SMc02556 6 None None None 15965893 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01457 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 15965054 Common smf hypothetical protein SMc01363 210 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 15966915 Common nadD nicotinic acid mononucleotide adenyltransferase SMc03778 179 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 15965898 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc01462 68 COG0456 RimI, Acetyltransferases General function prediction only 15963918 Common TRm5N PARTIAL TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc02840 84 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966542 Common pykA pyruvate kinase SMc04005 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 15966422 Common - hypothetical protein SMc00703 49 COG1738 COG1738, Uncharacterized conserved protein Function unknown 15963979 Common - hypothetical protein SMc02901 24 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15964763 Common pbp PUTATIVE PENICILLIN-BINDING PROTEIN SMc00122 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 15964791 Common - hypothetical protein SMc02382 89 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 15965394 Common - hypothetical protein SMc00949 45 COG3785 COG3785, Uncharacterized conserved protein Function unknown 15965774 Nonpathogen - PUTATIVE TRANSMEMBRANE PROTEIN SMc04194 1 None None None 15964249 Common - HYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN SMc02184 63 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 15966293 Common - PUTATIVE DIPEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02028 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964851 Common - PUTATIVE TOXIN SECRETION ATP-BINDING ABC TRANSPORTER PROTEIN SMc02661 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 15965611 Common - hypothetical protein SMc00150 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 15965878 Common folA PROBABLE DIHYDROFOLATE REDUCTASE PROTEIN SMc01442 145 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 15966549 Common pepF PUTATIVE OLIGOENDOPEPTIDASE F PROTEIN SMc04012 89 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 15966806 Common kgd alpha-ketoglutarate decarboxylase SMc02482 149 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 15964117 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase SMc01155 201 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15966418 Common - hypothetical protein SMc00707 57 COG3542 COG3542, Uncharacterized conserved protein Function unknown 15966948 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc03812 176 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15966909 Common rpmA 50S ribosomal protein L27 SMc03772 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 15965048 Common rpmG 50S ribosomal protein L33 SMc01369 118 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 15967001 Common - PUTATIVE AMINO-ACID TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03865 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15966313 Common - hypothetical protein SMc02333 124 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 15964024 Common - hypothetical protein SMc00351 78 COG1396 HipB, Predicted transcriptional regulators Transcription 15965174 Common - hypothetical protein SMc01006 57 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 15965762 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04180 3 None None None 15966989 Common - intracellular septation protein A SMc03853 91 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 15965459 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00278 143 COG1522 Lrp, Transcriptional regulators Transcription 15967066 Common - PUTATIVE VIRULENCE ASSOCIATED PROTEIN HOMOLOGUE SMc04881 65 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 15966987 Common ccmG PUTATIVE THIOL:DISULFIDE INTERCHANGE PROTEIN (CYTOCHROME C BIOGENESIS PROTEIN) SMc03851 146 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 161621432 Common fumC fumarate hydratase SMc00149 221 COG0114 FumC, Fumarase Energy production and conversion 15965413 Common trpD anthranilate phosphoribosyltransferase SMc00235 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 15964240 Common - hypothetical protein SMc02159 9 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15966717 Common - hypothetical protein SMc03129 162 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 15966187 Common - hypothetical protein SMc01507 122 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 15964632 Common - hypothetical protein SMc00973 133 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 15966474 Common - hypothetical protein SMc00651 22 COG5400 COG5400, Uncharacterized protein conserved in bacteria Function unknown 15966509 Common mexE2 PUTATIVE MULTIDRUG EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc03972 146 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 15964670 Common - hypothetical protein SMc00019 129 COG1678 COG1678, Putative transcriptional regulator Transcription 15966610 Common - hypothetical protein SMc03935 159 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 15964517 Common katA CATALASE HYDROPEROXIDASE HPII(III) PROTEIN SMc00819 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 15965584 Common - hypothetical protein SMc00176 97 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 15964640 Common - hypothetical protein SMc00965 203 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 161621439 Common purU formyltetrahydrofolate deformylase SMc04154 217 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 15966171 Common ntrR1 NITROGEN REGULATORY PROTEIN SMc01521 61 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 15963923 Common - PUTATIVE ANTIBIOTIC RESISTANCE PROTEIN SMc02845 23 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 15964440 Common fliR flagellar biosynthesis protein FliR SMc03055 127 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 15963781 Common trpB tryptophan synthase subunit beta SMc02766 225 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 15966389 Common - PUTATIVE DNA-3-METHYLADENINE GLYCOSIDASE II PROTEIN SMc00736 107 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 15963926 Common - hypothetical protein SMc02848 46 COG3807 COG3807, Uncharacterized protein conserved in bacteria Function unknown 15965441 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00260 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15963994 Common truB tRNA pseudouridine synthase B SMc00321 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 15966845 Nonpathogen - hypothetical protein SMc03244 4 None None None 15965632 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00131 153 COG1522 Lrp, Transcriptional regulators Transcription 15966574 Common TRm17N PUTATIVE PARTIAL TRANSPOSASE FOR ISRM17 PROTEIN SMc04038 9 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 15965056 Common - dihydroorotase SMc01361 212 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 15964416 Common flgA flagellar basal body P-ring biosynthesis protein FlgA SMc03031 44 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 15964504 Nonpathogen - hypothetical protein SMc00806 5 None None None 15964861 Common - hypothetical protein SMc02554 121 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 15964435 Common flaF flagellar biosynthesis regulatory protein FlaF SMc03050 11 COG5442 FlaF, Flagellar biosynthesis regulator FlaF Cell motility and secretion 15966390 Common - glutamyl-Q tRNA(Asp) synthetase SMc00735 247 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 15966943 Common amtB PROBABLE AMMONIUM TRANSPORTER PROTEIN SMc03807 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 15964537 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00921 41 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 15965972 Common - PUTATIVE PERMEASE PROTEIN SMc01607 183 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 15965857 Common - hypothetical protein SMc01421 13 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 15964943 Common cyaB ADENYLATE CYCLASE 2 PROTEIN SMc00621 67 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15966228 Common ureA urease subunit gamma SMc01941 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 15965206 Nonpathogen - hypothetical protein SMc04865 1 None None None 15964668 Common - HYPOTHETICAL PEROXIREDOXIN PROTEIN SMc00072 81 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 15966470 Common - hypothetical protein SMc00655 13 None None None 15965621 Common - hypothetical protein SMc00141 67 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 15965514 Common - hypothetical protein SMc00506 37 COG5473 COG5473, Predicted integral membrane protein Function unknown 15966071 Common dnaG DNA primase SMc01567 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 15965497 Common - hypothetical protein SMc00539 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 15965844 Nonpathogen - hypothetical protein SMc01490 2 None None None 15966645 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc03161 93 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15965693 Common - 3-oxoacyl-(acyl carrier protein) synthase II SMc04275 15 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15963988 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02910 129 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966065 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc01561 38 COG4764 COG4764, Uncharacterized protein conserved in bacteria Function unknown 15965475 Common thrA homoserine dehydrogenase SMc00293 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 15965707 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04297 11 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 15966578 Common - PUTATIVE MONOPHOSPHATASE PROTEIN SMc04042 191 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 15964846 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02603 113 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965663 Common - hypothetical protein SMc04240 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 15965331 Common - hypothetical protein SMc01213 86 COG2321 COG2321, Predicted metalloprotease General function prediction only 15966888 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03289 1 None None None 15964029 Common genX PUTATIVE LYSYL-TRNA SYNTHETASE PROTEIN SMc00356 200 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 15966238 Common livH PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN SMc01951 166 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 15964255 Common - hypothetical protein SMc02153 31 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 15965670 Common - PUTATIVE BETA-XYLOSIDASE PROTEIN SMc04247 38 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 15964627 Common - hypothetical protein SMc00978 38 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 15964667 Common rnhA ribonuclease H SMc00018 182 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 15964422 Common flaA FLAGELLIN A PROTEIN SMc03037 121 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 15964773 Common cycL CYTOCHROME C-TYPE BIOGENESIS TRANSMEMBRANE PROTEIN SMc02364 91 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 15965127 Common rpmD 50S ribosomal protein L30 SMc01291 53 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 15966716 Common - hypothetical protein SMc03130 15 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15966103 Common - hypothetical protein SMc02688 42 COG3564 COG3564, Uncharacterized protein conserved in bacteria Function unknown 15966011 Common - hypothetical protein SMc01646 11 COG3636 COG3636, Predicted transcriptional regulator Transcription 15966152 Common opuC PUTATIVE GLYCINE BETAINE-BINDING ABC TRANSPORTER PROTEIN SMc02737 63 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 15964175 Common TRm19C CTERM FRAGMENT OF A PUTATIVE TRANSPOSASE PROTEIN SMc01098 57 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966005 Common - PUTATIVE ACYL-COA SYNTHETASE PROTEIN SMc01640 138 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 15967034 Common TRm1a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc03898 31 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966049 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc04442 37 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15965326 Common greA transcription elongation factor GreA SMc01218 204 COG0782 GreA, Transcription elongation factor Transcription 15966758 Common TRm11a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc03088 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965688 Common - hypothetical protein SMc04265 13 None None None 15966898 Common TRm26.1 PUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM26 SMc03301 15 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965403 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00958 2 None None None 15966311 Common - hypothetical protein SMc02332 100 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 15966133 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc02718 1 None None None 15964600 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00859 20 None None None 15964616 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00989 25 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 15966234 Common - hypothetical protein SMc01947 10 None None None 15966828 Common - hypothetical protein SMc03227 94 COG2947 COG2947, Uncharacterized conserved protein Function unknown 15964786 Common etf PROBABLE ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE SMc02377 111 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 15965537 Common - hypothetical protein SMc00535 181 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 15966055 Common - hypothetical protein SMc01551 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 15964503 Common - hypothetical protein SMc00805 21 COG3823 COG3823, Glutamine cyclotransferase Posttranslational modification, protein turnover, chaperones 15964838 Common - hypothetical protein SMc02638 16 COG3832 COG3832, Uncharacterized conserved protein Function unknown 15964402 Common - hypothetical protein SMc03017 9 None None None 15965530 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00490 166 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 15965195 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase SMc01027 185 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 15964981 Nonpathogen - hypothetical protein SMc01902 1 None None None 15966078 Common aatA aspartate aminotransferase SMc01578 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15964956 Common - hypothetical protein SMc01765 15 COG1714 COG1714, Predicted membrane protein/domain Function unknown 15965651 Common - hypothetical protein SMc04228 133 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 15964409 Common flgF flagellar basal body rod protein FlgF SMc03024 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 15963817 Common - hypothetical protein SMc02583 30 COG5321 COG5321, Uncharacterized protein conserved in bacteria Function unknown 15965437 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00256 119 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 15964049 Nonpathogen - hypothetical protein SMc00376 1 None None None 15964326 Common rkpJ CAPSULAR POLYSACCHARIDE BIOSYNTHESIS/EXPORT PROTEIN SMc02269 30 COG3562 KpsS, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 15964222 Nonpathogen - hypothetical protein SMc02178 1 None None None 15966685 Common bkdAa PROBABLE 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT PROTEIN SMc03201 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 15965701 Common - hypothetical protein SMc04286 122 COG0730 COG0730, Predicted permeases General function prediction only 15965268 Common - hypothetical protein SMc02081 9 COG3827 COG3827, Uncharacterized protein conserved in bacteria Function unknown 15964595 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00864 1 None None None 15966128 Common rpoE3 PUTATIVE RNA POLYMERASE SIGMA-E FACTOR (SIGMA-24) PROTEIN SMc02713 148 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 15966295 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02030 167 COG0583 LysR, Transcriptional regulator Transcription 15964907 Common - hypothetical protein SMc00584 111 COG0795 COG0795, Predicted permeases General function prediction only 15965576 Common - hypothetical protein SMc00183 79 COG0431 COG0431, Predicted flavoprotein General function prediction only 15965913 Common - hypothetical protein SMc01882 105 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 15964042 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00369 98 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15964496 Common - hypothetical protein SMc00798 3 None None None 15963791 Common - PUTATIVE SENSOR HISTIDINE KINASE PROTEIN SMc02756 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 15964261 Common phoR PROBABLE PHOSPHATE REGULON SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc02147 219 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 15965253 Common cdsA PROBABLE PHOSPHATIDATE CYTIDYLYLTRANSFERASE TRANSMEMBRANE PROTEIN SMc02096 216 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 15966834 Common - hypothetical protein SMc03233 18 COG4223 COG4223, Uncharacterized protein conserved in bacteria Function unknown 15964215 Common - hypothetical protein SMc01704 21 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 15965757 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04175 80 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 15966756 Common cheW3 PUTATIVE CHEMOTAXIS PROTEIN SMc03090 136 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 15966668 Common phaG1 PH ADAPTATION POTASSIUM EFFLUX SYSTEM G TRANSMEMBRANE PROTEIN SMc03184 39 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 15965746 Nonpathogen - hypothetical protein SMc04164 1 None None None 15966160 Common kdgK PUTATIVE 2-DEHYDRO-3-DEOXYGLUCONOKINASE PROTEIN SMc01531 101 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 15965948 Common - PUTATIVE METHYLTRANSFERASE PROTEIN SMc01847 111 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15964268 Common phoB PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN SMc02140 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15964749 Common phaE2 putative monovalent cation/H+ antiporter subunit E SMc00055 81 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 15964391 Common cheY1 CHEMOTAXIS REGULATOR PROTEIN SMc03006 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15964655 Common ribA PROBABLE RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA INCLUDES: GTP CYCLOHYDROLASE II 3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE SMc00008 230 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 15964975 Common plsX fatty acid/phospholipid synthesis protein SMc01784 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 15965320 Common trxB PROBABLE THIOREDOXIN REDUCTASE PROTEIN SMc01224 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 15964006 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase SMc00333 229 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 15963865 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04140 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15964150 Common mviN PUTATIVE VIRULENCE FACTOR MVIN HOMOLOG TRANSMEMBRANE PROTEIN SMc01123 189 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 15964676 Common livJ PROBABLE LEU/ILE/VAL-BINDING PROTEIN SMc00078 138 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 15964085 Common pyrF orotidine 5'-phosphate decarboxylase SMc00412 170 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 15966316 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02336 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966780 Common sitB PUTATIVE IRON TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02508 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 15965381 Common ilvA threonine dehydratase SMc00936 204 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 15965024 Common - hypothetical protein SMc01919 26 COG3743 COG3743, Uncharacterized conserved protein Function unknown 15966991 Common - hypothetical protein SMc03855 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 15963871 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04134 124 COG1309 AcrR, Transcriptional regulator Transcription 15967044 Common aatB ASPARTATE AMINOTRANSFERASE B PROTEIN SMc04386 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15966608 Common soxB2 PUTATIVE SARCOSINE OXIDASE SUBUNIT B PROTEIN SMc03933 103 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15966088 Nonpathogen - hypothetical protein SMc01591 1 None None None 15964472 Common acsA2 acetyl-CoA synthetase SMc00774 201 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 15964761 Common - hypothetical protein SMc00128 11 COG5436 COG5436, Predicted integral membrane protein Function unknown 15963974 Common ilvE1 branched-chain amino acid aminotransferase SMc02896 208 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 15967063 Common leuB 3-isopropylmalate dehydrogenase SMc04405 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 15964581 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00878 59 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 15963778 Common - hypothetical protein SMc02769 19 None None None 15963862 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04143 137 COG2186 FadR, Transcriptional regulators Transcription 15966751 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc03095 2 None None None 15965783 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04202 22 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 15964361 Nonpathogen - hypothetical protein SMc02304 1 None None None 15964278 Common - hypothetical protein SMc02220 76 COG3000 ERG3, Sterol desaturase Lipid metabolism 15964338 Common - hypothetical protein SMc02281 29 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 15966433 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00692 7 None None None 15963878 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04127 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 15966619 Common - glycerate dehydrogenase SMc04462 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 15964382 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02323 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 15964930 Common - hypothetical protein SMc00608 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 15966735 Common pmi MANNOSE-6-PHOSPHATE ISOMERASE PROTEIN SMc03111 27 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 15964132 Common ptsN PROBABLE NITROGEN REGULATORY IIA PROTEIN SMc01141 136 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 15965117 Common rpmC 50S ribosomal protein L29 SMc01301 128 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 15964183 Common - hypothetical protein SMc01091 5 COG1733 COG1733, Predicted transcriptional regulators Transcription 15966216 Common ureG PROBABLE UREASE ACCESSORY PROTEIN SMc01830 152 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 15965507 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC PROTEIN SMc00513 26 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 15965245 Common - hypothetical protein SMc02104 61 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 15966095 Common - hypothetical protein SMc03744 32 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 15966336 Common - PUTATIVE BRANCHED CHAIN AMINO ACID BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc02356 133 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 15965761 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04179 115 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 15966376 Common mutT PUTATIVE MUTATOR PROTEIN 7,8-DIHYDRO-8-OXOGUANINE-TRIPHOSPHATASE SMc02448 106 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 15964588 Common atpB F0F1 ATP synthase subunit A SMc00871 202 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 15966176 Nonpathogen - hypothetical protein SMc01517 2 None None None 15963786 Common trxA PROBABLE THIOREDOXIN PROTEIN SMc02761 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 15966796 Nonpathogen - hypothetical protein SMc02492 1 None None None 15963769 Common - PUTATIVE HYDROXYACID ALDOLASE PROTEIN SMc02778 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 15964139 Common ihfB integration host factor subunit beta SMc01134 203 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 15965606 Common aroF PROBABLE DAHP SYNTHETASE PROTEIN SMc00155 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 15965859 Common nthB PROBABLE NITRILE HYDRATASE SUBUNIT BETA PROTEIN SMc01423 18 None None None 15966640 Common - hypothetical protein SMc03156 111 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 15963773 Common - PUTATIVE ABC TRANSPORTER PERIPLASMIC BINDING PROTEIN SMc02774 96 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15966169 Common - hypothetical protein SMc01522 40 COG1309 AcrR, Transcriptional regulator Transcription 15964811 Common - PUTATIVE MUREIN TRANSGLYCOSYLASE PROTEIN SMc02403 157 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 15965525 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase SMc00495 168 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 15965145 Common - hypothetical protein SMc01272 34 COG4291 COG4291, Predicted membrane protein Function unknown 15967085 Common - hypothetical protein SMc02803 11 COG5468 COG5468, Predicted secreted (periplasmic) protein Function unknown 15966625 Common - hypothetical protein SMc02980 11 None None None 15965956 Common - hypothetical protein SMc02818 81 COG2267 PldB, Lysophospholipase Lipid metabolism 15964568 Common - hypothetical protein SMc00933 23 COG3908 COG3908, Uncharacterized protein conserved in bacteria Function unknown 15963762 Common - PUTATIVE LYTIC MUREIN TRANSGLYCOSYLASE A PROTEIN SMc02785 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 15964390 Common - hypothetical protein SMc03005 7 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 15966273 Common - hypothetical protein SMc01986 9 COG5605 COG5605, Predicted small integral membrane protein Function unknown 15966114 Common - hypothetical protein SMc02699 4 COG5466 COG5466, Predicted small metal-binding protein Function unknown 15966850 Common TRm11b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc03312 48 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 15963802 Common coaA pantothenate kinase SMc02567 78 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 15964052 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00379 73 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 15966042 Common - hypothetical protein SMc01545 8 COG3153 COG3153, Predicted acetyltransferase General function prediction only 15966743 Common - PUTATIVE CARBON MONOXIDE DEHYDROGENASE MEDIUM SUBUNIT TRANSMEMBRANE PROTEIN SMc03103 71 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 15965555 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc00471 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15966277 Common - PUTATIVE FERREDOXIN REDUCTASE PROTEIN SMc01990 196 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 15966705 Common - hypothetical protein SMc03141 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 15964121 Common dnaA chromosomal replication initiation protein SMc01167 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15964806 Common - PUTATIVE INTEGRASE PROTEIN SMc02397 204 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15964722 Nonpathogen - hypothetical protein SMc00104 1 COG5350 COG5350, Predicted protein tyrosine phosphatase General function prediction only 15965083 Common mrcA1 PROBABLE PENICILLIN-BINDING 1A TRANSMEMBRANE PROTEIN SMc01334 202 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 15965973 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc01608 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 15964913 Nonpathogen - HYPOTHETICAL/UNKNOWN SIGNAL PEPTIDE PROTEIN SMc00591 1 None None None 15966413 Common - hypothetical protein SMc00712 15 COG4093 COG4093, Uncharacterized protein conserved in bacteria Function unknown 15964128 Common - hypothetical protein SMc01145 21 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15966182 Common hmuT PUTATIVE HEMIN BINDING PERIPLASMIC TRANSMEMBRANE PROTEIN SMc01512 97 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 15966224 Common - PUTATIVE UREASE ACCESSORY PROTEIN SMc01838 7 None None None 15965738 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04340 64 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 15966675 Common cobI precorrin-2 C(20)-methyltransferase SMc03191 176 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 15966307 Common - glucose-6-phosphate isomerase SMc02042 12 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 15964076 Common - HYPOTHETICAL NOL1/NOP2/SUN FAMILY SIGNATURE PROTEIN SMc00403 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 15965895 Common - hypothetical protein SMc01459 85 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 15963967 Common - PUTATIVE TRANSPORT PROTEIN SMc02889 106 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964014 Nonpathogen - hypothetical protein SMc00341 1 None None None 15965400 Common - hypothetical protein SMc00955 27 COG4782 COG4782, Uncharacterized protein conserved in bacteria Function unknown 15966083 Common cspA3 PUTATIVE COLD SHOCK TRANSCRIPTION REGULATOR PROTEIN SMc01585 179 COG1278 CspC, Cold shock proteins Transcription 15965880 Common thyA thymidylate synthase SMc01444 144 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 15966353 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02425 130 COG1802 GntR, Transcriptional regulators Transcription 15965189 Common - hypothetical protein SMc01021 28 COG2353 COG2353, Uncharacterized conserved protein Function unknown 15965466 Common TRm5 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc00285 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966516 Common gap glyceraldehyde-3-phosphate dehydrogenase SMc03979 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 15965803 Common cyaF3 PROBABLE ADENYLATE/GUANYLATE CYCLASE PROTEIN SMc04292 44 COG5616 COG5616, Predicted integral membrane protein Function unknown 15965128 Common rplO 50S ribosomal protein L15 SMc01290 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 15965430 Nonpathogen - hypothetical protein SMc00250 1 None None None 15965292 Common secD1 bifunctional preprotein translocase subunit SecD/SecF SMc02057 201 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 15965251 Common frr ribosome recycling factor SMc02098 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 15964793 Common - PUTATIVE GLYCOSYLTRANSFERASE TRANSMEMBRANE PROTEIN SMc02384 212 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 15964886 Common - PUTATIVE TRANSPORT PROTEIN TRANSMEMBRANE SMc00563 57 None None None 15966636 Common - hypothetical protein SMc03152 31 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 15963828 Common - hypothetical protein SMc02594 94 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 15964202 Common merA1 PUTATIVE MERCURIC REDUCTASE PROTEIN SMc01717 239 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15965644 Common - hypothetical protein SMc04221 23 None None None 15964147 Common tme malic enzyme SMc01126 211 COG0281 SfcA, Malic enzyme Energy production and conversion 15965594 Common - PUTATIVE OXIDOREDUCTASE NAD PROTEIN SMc00166 113 COG0778 NfnB, Nitroreductase Energy production and conversion 15966872 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc03268 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15964557 Common - hypothetical protein SMc00900 17 COG3742 COG3742, Uncharacterized protein conserved in bacteria Function unknown 15965861 Common - hypothetical protein SMc01425 69 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15964585 Common kup1 PROBABLE KUP SYSTEM POTASSIUM UPTAKE TRANSMEMBRANE PROTEIN SMc00873 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 15963783 Common accD acetyl-CoA carboxylase subunit beta SMc02764 218 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 15965743 Common - hypothetical protein SMc04161 8 COG3832 COG3832, Uncharacterized conserved protein Function unknown 15966125 Common fic PUTATIVE CELL FILAMENTATION PROTEIN SMc02710 31 COG2184 Fic, Protein involved in cell division Cell division and chromosome partitioning 15965791 Common - hypothetical protein SMc04267 7 COG4424 COG4424, Uncharacterized protein conserved in bacteria Function unknown 15965212 Common ntrC NITROGEN ASSIMILATION REGULATORY PROTEIN SMc01043 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15966920 Common - hypothetical protein SMc03784 60 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 15964818 Common relA PUTATIVE GTP PYROPHOSPHOKINASE (ATP:GTP 3'-PYROPHOSPHOTRANSFERASE) PROTEIN SMc02659 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 15964550 Common ileS isoleucyl-tRNA synthetase SMc00908 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15964442 Common - hypothetical protein SMc03071 12 COG3951 COG3951, Rod binding protein Cell envelope biogenesis, outer membrane / Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 15964729 Common cycF PUTATIVE CYTOCHROME C SIGNAL PEPTIDE PROTEIN SMc00045 30 COG3909 COG3909, Cytochrome c556 Energy production and conversion 15964713 Common - hypothetical protein SMc00039 75 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15965100 Common rplL 50S ribosomal protein L7/L12 SMc01318 205 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 15965136 Common - putative sulfite oxidase subunit YedY SMc01281 120 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 15965409 Common glmS D-fructose-6-phosphate amidotransferase SMc00231 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 15965589 Common - hypothetical protein SMc00171 62 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 15967051 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04393 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966404 Common TRm22 PUTATIVE TRANSPOSASE PROTEIN SMc00721 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15967052 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04394 165 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15965016 Common - hypothetical protein SMc01911 67 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 15965669 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc04246 17 COG5455 COG5455, Predicted integral membrane protein Function unknown 15965180 Common - hypothetical protein SMc01012 78 COG0778 NfnB, Nitroreductase Energy production and conversion 15964804 Common - hypothetical protein SMc02461 59 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 15963823 Common - hypothetical protein SMc02589 33 COG4134 COG4134, ABC-type uncharacterized transport system, periplasmic component General function prediction only 15965711 Common cobW PROBABLE COBALAMINE BIOSYNTHESIS PROTEIN SMc04304 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 15964297 Common - hypothetical protein SMc02240 64 COG1284 COG1284, Uncharacterized conserved protein Function unknown 15965686 Common - PUTATIVE AMINO ACID CARRIER TRANSMEMBRANE PROTEIN SMc04263 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 15965619 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A SMc00143 117 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 15964469 Common potH PROBABLE PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN SMc00772 216 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 15965908 Common prmA ribosomal protein L11 methyltransferase SMc01472 170 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 15965485 Common - PUTATIVE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE PROTEIN SMc00533 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 15966967 Common - hypothetical protein SMc03831 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 15966998 Common - hypothetical protein SMc03862 57 COG0730 COG0730, Predicted permeases General function prediction only 15964768 Common feuQ PROBABLE SENSOR HISTIDINE KINASE PROTEIN SMc00129 201 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15964437 Common flgD flagellar basal body rod modification protein SMc03052 98 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 15964062 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00389 1 None None None 15966104 Common - PROBABLE ALDEHYDE DEHYDROGENASE PROTEIN SMc02689 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15964742 Common - hypothetical protein SMc00455 114 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 15965355 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc01191 4 COG1694 MazG, Predicted pyrophosphatase General function prediction only 15965582 Common - hypothetical protein SMc00178 43 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 15966260 Common - PUTATIVE HOMOLOGOUS TO A GLUTAMINE SYNTHETASE PROTEIN SMc01973 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 15965965 Common - PUTATIVE ALDEHYDE DEHYDROGENASE PROTEIN SMc01588 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15965012 Common - hypothetical protein SMc01907 26 COG3391 COG3391, Uncharacterized conserved protein Function unknown 15964393 Common cheW1 CHEMOTAXIS PROTEIN SMc03008 136 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 15965928 Common murC UDP-N-acetylmuramate--L-alanine ligase SMc01867 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 15966118 Common - hypothetical protein SMc02703 173 COG0714 COG0714, MoxR-like ATPases General function prediction only 15964342 Common cyaE PUTATIVE ADENYLATE CYCLASE TRANSMEMBRANE PROTEIN SMc02285 77 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15965936 Common - hypothetical protein SMc01859 16 COG5462 COG5462, Predicted secreted (periplasmic) protein Function unknown 15964895 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase NodG SMc00572 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15965837 Common - hypothetical protein SMc01488 19 COG5349 COG5349, Uncharacterized protein conserved in bacteria Function unknown 15966099 Common - PUTATIVE HYDROLASE/PEPTIDASE PROTEIN SMc02684 92 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 15964161 Common - hypothetical protein SMc01112 215 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15963843 Common glnT GLUTAMINE SYNTHETASE III PROTEIN SMc02613 223 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 15966787 Common atpD F0F1 ATP synthase subunit beta SMc02501 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 15966493 Common tolA HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc03956 20 COG5373 COG5373, Predicted membrane protein Function unknown 15965166 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00998 16 COG3672 COG3672, Predicted periplasmic protein Function unknown 15964091 Common gshB1 glutathione synthetase SMc00419 140 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 15965360 Nonpathogen - hypothetical protein SMc01186 1 None None None 15966271 Common coxO PROBABLE CYTOCHROME-C OXIDASE TRANSMEMBRANE PROTEIN SMc01984 79 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 15966380 Common secA preprotein translocase subunit SecA SMc04458 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 15966086 Nonpathogen - hypothetical protein SMc01589 1 None None None 15965624 Common - PUTATIVE AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN SMc00139 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 15966904 Nonpathogen - hypothetical protein SMc03766 1 None None None 15966596 Common glgP PROBABLE GLYCOGEN PHOSPHORYLASE PROTEIN SMc04460 143 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 15965205 Common lipA lipoyl synthase SMc01037 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 15964305 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02248 182 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 15966775 Common - PUTATIVE PERMEASE TRANSMEMBRANE PROTEIN SMc02513 124 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 15963937 Common - hypothetical protein SMc02859 17 COG5486 COG5486, Predicted metal-binding integral membrane protein Function unknown 15964642 Common - hypothetical protein SMc00963 3 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 15966101 Common prsA ribose-phosphate pyrophosphokinase SMc02686 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 15964731 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc00108 72 COG0456 RimI, Acetyltransferases General function prediction only 15965778 Nonpathogen - hypothetical protein SMc04197 1 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15964486 Common dppC1 PROBABLE DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN SMc00788 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15966808 Common sucC succinyl-CoA synthetase subunit beta SMc02480 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 15965061 Common - hypothetical protein SMc01356 3 None None None 15965527 Common purQ phosphoribosylformylglycinamidine synthase subunit I SMc00493 231 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 15966682 Common modC PUTATIVE MOLYBDENUM TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc03198 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 15965233 Common - PUTATIVE SALICYLATE HYDROXYLASE PROTEIN SMc02116 85 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 15966617 Common - hypothetical protein SMc03942 176 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 15964578 Common dgoK1 PUTATIVE 2-DEHYDRO-3-DEOXYGALACTONOKINASE PROTEIN SMc00881 39 COG3734 DgoK, 2-keto-3-deoxy-galactonokinase Carbohydrate transport and metabolism 15965968 Common - hypothetical protein SMc01600 44 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 15966877 Common TRm28.1 PUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM28 SMc03278 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966371 Common grxC PROBABLE GLUTAREDOXIN 3 PROTEIN SMc02443 114 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 15966544 Common - hypothetical protein SMc04007 40 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 15966158 Common adeC1 PUTATIVE ADENINE DEAMINASE PROTEIN SMc01533 79 COG1001 AdeC, Adenine deaminase Nucleotide transport and metabolism 15966429 Common aroB 3-dehydroquinate synthase SMc00696 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 15964349 Common TRm11a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc02291 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965052 Common rnr PUTATIVE EXORIBONUCLEASE II PROTEIN SMc01365 192 COG0557 VacB, Exoribonuclease R Transcription 15966465 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00660 2 None None None 15965494 Common bcp PUTATIVE BACTERIOFERRITIN COMIGRATORY PROTEIN SMc00524 217 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 15966698 Common - hypothetical protein SMc03148 6 None None None 15965379 Common cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein SMc04449 125 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 15964134 Common rpoN RNA polymerase factor sigma-54 SMc01139 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 15964784 Common - hypothetical protein SMc02375 151 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 15965919 Common - hypothetical protein SMc01876 130 COG4105 ComL, DNA uptake lipoprotein General function prediction only 15964220 Common - hypothetical protein SMc02180 17 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 15965396 Common - hypothetical protein SMc00951 180 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15966424 Common cobT PROBABLE COBALAMIN BIOSYNTHESIS PROTEIN SMc00701 46 COG4547 CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) Coenzyme metabolism 15964152 Common trpS tryptophanyl-tRNA synthetase SMc01121 229 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15965871 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase SMc01435 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 15966791 Nonpathogen - hypothetical protein SMc02497 1 None None None 15965455 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00274 160 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 15967022 Common TRm21 PUTATIVE TRANSPOSASE PROTEIN SMc03886 33 COG5433 COG5433, Transposase DNA replication, recombination, and repair 15966385 Common - hypothetical protein SMc00740 24 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 15964022 Common lepA GTP-binding protein LepA SMc00349 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 15965546 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00479 45 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15966935 Common - hypothetical protein SMc03799 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 15966185 Nonpathogen - hypothetical protein SMc01509 1 COG4575 ElaB, Uncharacterized conserved protein Function unknown 15964234 Common pyrE orotate phosphoribosyltransferase SMc02165 163 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 15966813 Common - PUTATIVE OUTER MEMBRANE LIPOPROTEIN PRECURSOR SMc02475 7 None None None 15966411 Common - PUTATIVE 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE (PLSC) PROTEIN SMc00714 155 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15963970 Common - PUTATIVE TRANSPORT PROTEIN SMc02892 184 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966398 Common hbdA 3-hydroxybutyryl-CoA dehydrogenase SMc00727 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 15966526 Common - hypothetical protein SMc03989 18 COG5317 COG5317, Uncharacterized protein conserved in bacteria Function unknown 15966476 Common - PUTATIVE TRNA/RRNA METHYLTRANSFERASE PROTEIN SMc00649 197 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 15964685 Common ppdK pyruvate phosphate dikinase SMc00025 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 15966368 Common ubiG 3-demethylubiquinone-9 3-methyltransferase SMc02440 165 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 15966568 Common - HYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN SMc04032 23 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 15966862 Common - hypothetical protein SMc03256 24 None None None 15966452 Common - N-formimino-L-glutamate deiminase SMc00673 108 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 15964519 Nonpathogen - hypothetical protein SMc00821 2 None None None 15966535 Common - HYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN SMc03998 71 COG0640 ArsR, Predicted transcriptional regulators Transcription 15965107 Common tuf elongation factor Tu SMc01311 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 15967031 Common pyc pyruvate carboxylase SMc03895 240 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 15963943 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc02865 26 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 15965071 Common aat leucyl/phenylalanyl-tRNA--protein transferase SMc01346 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 15964688 Common - hypothetical protein SMc00026 13 None None None 15964756 Common - hypothetical protein SMc00060 9 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 15964360 Common - PUTATIVE PARTIAL TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc02303 15 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964758 Common - hypothetical protein SMc00120 6 COG5330 COG5330, Uncharacterized protein conserved in bacteria Function unknown 15965824 Common - PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04351 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 15966561 Common - PUTATIVE MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE PROTEIN SMc04024 109 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 15964853 Common - PUTATIVE TOXIN-ACTIVATING LYSINE-ACYLTRANSFERASE PROTEIN SMc02660 12 COG2994 HlyC, ACP:hemolysin acyltransferase (hemolysin-activating protein) Posttranslational modification, protein turnover, chaperones 15966924 Common dnaE2 PUTATIVE DNA POLYMERASE III ALPHA CHAIN PROTEIN SMc03788 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 15966199 Common smoC PROBABLE TRANSCRIPTION REGULATOR PROTEIN SMc01495 64 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 15966603 Common - hypothetical protein SMc03928 24 COG4427 COG4427, Uncharacterized protein conserved in bacteria Function unknown 15965338 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase SMc01207 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 15966464 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00661 1 None None None 15965925 Common aqpZ1 aquaporin Z SMc01870 124 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 15964354 Common TRm1a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc02298 31 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964697 Common cysH PROBABLE PHOSPHOADENOSINE PHOSPHOSULFATE REDUCTASE PAPS REDUCTASE, THIOREDOXIN DEPENDENT PADOPS REDUCTASE 3'-PHOSPHOADENYLYLSULFATE SULFOTRANSFERASE CYSTEINE BIOSYNTHESIS PROTEIN SMc00092 154 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 15964625 Common - hypothetical protein SMc00980 9 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 15966283 Common - hypothetical protein SMc02018 5 None None None 15964563 Common kdtA 3-deoxy-D-manno-octulosonic-acid transferase SMc00894 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 15966980 Common - hypothetical protein SMc03844 30 None None None 15964520 Common - hypothetical protein SMc00822 37 COG4680 COG4680, Uncharacterized protein conserved in bacteria Function unknown 15966724 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03122 172 COG0583 LysR, Transcriptional regulator Transcription 15967073 Common - hypothetical protein SMc04085 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 15965006 Common - hypothetical protein SMc01813 77 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 15964264 Common pstC PROBABLE PHOSPHATE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02144 230 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 15965994 Common eryD PUTATIVE ERY OPERON REPRESSOR TRANSCRIPTION REGULATOR PROTEIN SMc01629 70 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 15966689 Common purU1 formyltetrahydrofolate deformylase SMc03205 217 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 15966556 Common hemH ferrochelatase SMc04019 161 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 15964875 Common pssA PUTATIVE CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE TRANSMEMBRANE PROTEIN SMc00552 147 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 15964191 Common - hypothetical protein SMc01727 45 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 15966301 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02036 138 COG1802 GntR, Transcriptional regulators Transcription 15964711 Common gst2 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc00097 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15965342 Common - hypothetical protein SMc01203 33 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 15966178 Common - hypothetical protein SMc01515 8 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 15965850 Common - hypothetical protein SMc01414 100 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 15964571 Common - hypothetical protein SMc00887 176 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 15964285 Common fadB PUTATIVE FATTY OXIDATION COMPLEX ALPHA SUBUNIT INCLUDES: ENOYL-COA HYDRATASE, 3-HYDROXYACYL-COA DEHYDROGENASE, 3-HYDROXYBUTYRYL-COA EPIMERASE TRANSMEMBRANE PROTEIN SMc02227 166 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 15966683 Common - PUTATIVE MOLYBDENUM TRANSPORT ASSOCIATED PROTEIN SMc03199 87 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 15966081 Common - hypothetical protein SMc01583 121 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 15963854 Common - PUTATIVE FERREDOXIN PROTEIN SMc04151 106 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 15965676 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04253 108 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15963788 Common - hypothetical protein SMc02759 55 COG3893 COG3893, Inactivated superfamily I helicase DNA replication, recombination, and repair 15965221 Common - hypothetical protein SMc01052 22 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 15963891 Common pilA1 PUTATIVE PILIN SUBUNIT PROTEIN SMc04114 28 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 15966498 Common sqdB SULFOLIPID (UDP-SULFOQUINOVOSE) BIOSYNTHESIS PROTEIN SMc03961 77 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15966148 Nonpathogen - hypothetical protein SMc02733 3 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 15965492 Common tyrS tyrosyl-tRNA synthetase SMc00526 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15963848 Nonpathogen - hypothetical protein SMc02618 3 None None None 15965772 Nonpathogen - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04190 7 None None None 15964299 Common - hypothetical protein SMc02242 13 None None None 15964947 Common aspS aspartyl-tRNA synthetase SMc01756 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15965638 Common cobS cobalamin synthase SMc04215 34 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 15964257 Common - HYPOTHETICAL VIRULENCE ASSOCIATED PROTEIN HOMOLOGUE SMc02151 60 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 15965600 Nonpathogen cgmB PHOSPHOGLYCEROL TRANSFERASE, CYCLIC BETA-1,2-GLUCAN MODIFICATION PROTEIN SMc04438 1 None None None 15963904 Common - hypothetical protein SMc02827 111 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 15966745 Common - PUTATIVE CARBON MONOXIDE DEHYDROGENASE SMALL SUBUNIT PROTEIN SMc03101 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 15964548 Common - hypothetical protein SMc00910 49 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 15965196 Common eno PROBABLE ENOLASE PROTEIN SMc01028 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 15964844 Common - hypothetical protein SMc02632 63 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 15965172 Common hisI phosphoribosyl-AMP cyclohydrolase SMc01004 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 15965653 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc04230 53 COG3169 COG3169, Uncharacterized protein conserved in bacteria Function unknown 15964246 Common - hypothetical protein SMc02201 4 COG3311 AlpA, Predicted transcriptional regulator Transcription 15966484 Common serC phosphoserine aminotransferase SMc00640 76 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 15966554 Common omp10 PROBABLE OUTER MEMBRANE LIPOPROTEIN SMc04017 7 None None None 15963898 Common - hypothetical protein SMc02821 73 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 15966652 Common - PUTATIVE MULTIDRUG EFFLUX SYSTEM PROTEIN SMc03168 153 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 15964836 Common lpsL UDP-GLUCURONIC ACID EPIMERASE PROTEIN SMc02640 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15965421 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc00244 106 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 15964868 Common pip1 PUTATIVE PROLINE IMINOPEPTIDASE PROTEIN SMc02547 104 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15966507 Common - hypothetical protein SMc03970 21 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 15964825 Common rncS ribonuclease III SMc02652 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 15964478 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00780 131 COG0583 LysR, Transcriptional regulator Transcription 15966765 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02523 185 COG0583 LysR, Transcriptional regulator Transcription 15966722 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc03124 188 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15965515 Common - hypothetical protein SMc00505 53 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 15964177 Common - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc01097 6 None None None 15965059 Common - hypothetical protein SMc01358 97 COG0679 COG0679, Predicted permeases General function prediction only 15965439 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00258 1 None None None 15964407 Common motA flagellar motor protein MotA SMc03022 104 COG1291 MotA, Flagellar motor component Cell motility and secretion 15965155 Common def peptide deformylase SMc01262 202 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 15966740 Common - hypothetical protein SMc03106 36 COG3895 COG3895, Predicted periplasmic protein General function prediction only 15967064 Common - hypothetical protein SMc04406 20 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 15965443 Common - acetyl-CoA acetyltransferase SMc00262 91 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 15963965 Common - hypothetical protein SMc02887 5 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 15966130 Common - hypothetical protein SMc02715 17 COG3742 COG3742, Uncharacterized protein conserved in bacteria Function unknown 15965574 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING TRANSMEMBRANE TRANSMEMBRANE PROTEIN SMc00185 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15965815 Common - PROBABLE AMINOTRANSFERASE PROTEIN SMc04323 215 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 15964543 Common - hypothetical protein SMc00915 47 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15965630 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00133 172 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 15965085 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc01332 3 None None None 15964778 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc02369 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15965607 Common gor glutathione reductase SMc00154 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15966586 Common - hypothetical protein SMc04050 3 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 15965191 Common tpiA1 PROBABLE TRIOSEPHOSPHATE ISOMERASE PROTEIN SMc01023 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 15965283 Common tatB sec-independent translocase SMc02066 29 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 15964506 Common chrA PUTATIVE CHROMATE TRANSPORT PROTEIN SMc00808 100 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 15964328 Common rkpH RIBITOL TYPE DEHYDROGENASE PROTEIN SMc02271 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 15965846 Common - hypothetical protein SMc01412 25 COG3482 COG3482, Uncharacterized conserved protein Function unknown 15964609 Common - hypothetical protein SMc00850 58 COG1683 COG1683, Uncharacterized conserved protein Function unknown 15966957 Common - hypothetical protein SMc03821 39 COG3786 COG3786, Uncharacterized protein conserved in bacteria Function unknown 15965415 Common moaC molybdenum cofactor biosynthesis protein C SMc00237 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 15964539 Common hisS histidyl-tRNA synthetase SMc00919 248 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15964611 Common purD phosphoribosylamine--glycine ligase SMc00993 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 15965535 Common - PUTATIVE TRANSPORT PROTEIN SMc00537 150 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964320 Common ilvB1 hypothetical protein SMc02263 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 15966623 Common - hypothetical protein SMc02978 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 15966253 Common - PUTATIVE SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc01966 83 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 15964454 Common TRm22 PUTATIVE TRANSPOSASE PROTEIN SMc03067 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15966647 Common xylA xylose isomerase SMc03163 70 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 15964965 Nonpathogen - hypothetical protein SMc01774 2 None None None 15965736 Nonpathogen - hypothetical protein SMc04337 7 None None None 15964932 Common - hypothetical protein SMc00610 122 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 15965587 Common - hypothetical protein SMc00459 114 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 15965171 Common - hypothetical protein SMc01003 122 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 15964385 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc03000 115 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15964083 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00410 127 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15963928 Common polA DNA polymerase I SMc02850 217 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 15963996 Common rpsO 30S ribosomal protein S15 SMc00323 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 15966297 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02032 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 15964424 Common flaD PROBABLE FLAGELLIN D PROTEIN SMc03039 84 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 15965500 Common - hypothetical protein SMc00520 33 COG3070 TfoX, Regulator of competence-specific genes Transcription 15965106 Common fusA1 elongation factor G SMc01312 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 15964909 Common - DNA polymerase III subunit chi SMc00586 43 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 15963931 Common - hypothetical protein SMc02853 53 COG0392 COG0392, Predicted integral membrane protein Function unknown 15964820 Common - hypothetical protein SMc02657 3 None None None 15966714 Common ordL3 PUTATIVE OXIDOREDUCTASE PROTEIN SMc03132 97 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15965580 Common hemF coproporphyrinogen III oxidase SMc00180 112 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 15965168 Common - hypothetical protein SMc01000 21 COG5388 COG5388, Uncharacterized protein conserved in bacteria Function unknown 15964102 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00430 131 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15966472 Common - PUTATIVE 2-COMPONENT RECEIVER DOMAIN PROTEIN SMc00653 86 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 15966815 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02473 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15966576 Common ibpA PROBABLE HEAT SHOCK PROTEIN SMc04040 64 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 15965161 Common sda PROBABLE L-SERINE DEHYDRATASE PROTEIN SMc01256 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 15964920 Common - PUTATIVE BRANCHED-CHAIN AMINO ACID TRANSPORT PERMEASE PROTEIN SMc00598 94 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 15965473 Common - HYPOTHETICAL LIPOPROTEIN SMc00291 13 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 15966708 Common - PUTATIVE SUGAR KINASE PROTEIN SMc03138 163 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 15963986 Common recR recombination protein RecR SMc02908 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 15966886 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc03287 15 None None None 15963767 Common gabD1 PROBABLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE [NADP+] PROTEIN SMc02780 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15965543 Common - hypothetical protein SMc00482 155 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 15966035 Common - hypothetical protein SMc01670 20 COG5500 COG5500, Predicted integral membrane protein Function unknown 15966226 Common ureB urease subunit beta SMc01939 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 15965119 Common rplN 50S ribosomal protein L14 SMc01299 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 15964316 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02259 166 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15964996 Common rplM 50S ribosomal protein L13 SMc01804 237 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 15966029 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01664 170 COG0583 LysR, Transcriptional regulator Transcription 15966093 Common proC pyrroline-5-carboxylate reductase SMc02677 213 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 15965073 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SMc01344 183 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 15966642 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc03158 163 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 15963760 Common - hypothetical protein SMc02787 66 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 15965357 Common tmk PUTATIVE THYMIDYLATE KINASE, DTMP KINASE PROTEIN SMc01189 223 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 15963999 Common fabI2 enoyl-(acyl carrier protein) reductase SMc00326 232 COG0623 FabI, Enoyl- acyl-carrier-protein 15966514 Common - hypothetical protein SMc03977 13 None None None 15966971 Common ligT PUTATIVE 2'-5' RNA LIGASE PROTEIN SMc03835 116 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 15966290 Common - PUTATIVE DIPEPTIDE-BINDING PERIPLASMIC PROTEIN SMc02025 196 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966305 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02040 72 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 15966116 Common - hypothetical protein SMc02701 132 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 15966275 Nonpathogen - hypothetical protein SMc01988 5 None None None 15963771 Common - PUTATIVE ALTRONATE HYDROLASE PROTEIN SMc02776 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 15966013 Common - hypothetical protein SMc01648 67 COG2936 COG2936, Predicted acyl esterases General function prediction only 15964410 Common fliI flagellum-specific ATP synthase SMc03025 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 15966801 Common lpdA2 dihydrolipoamide dehydrogenase SMc02487 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15965750 Common - hypothetical protein SMc04168 72 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 15964126 Common - coproporphyrinogen III oxidase SMc01147 212 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 15965266 Common - PUTATIVE METHYLTRANSFERASE (PCM-LIKE) TRANSMEMBRANE PROTEIN SMc02083 155 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 15964911 Common - hypothetical protein SMc00589 32 None None None 15966073 Common carA carbamoyl phosphate synthase small subunit SMc01569 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 15964074 Common - hypothetical protein SMc00401 49 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 15966053 Common - replicative DNA helicase SMc01749 15 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 15964983 Common - hypothetical protein SMc01791 16 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 15964309 Common galE PROBABLE UDP-GLUCOSE 4-EPIMERASE PROTEIN SMc02252 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 15964020 Common rnk nucleoside diphosphate kinase regulator SMc00347 75 COG0782 GreA, Transcription elongation factor Transcription 15964054 Common - hypothetical protein SMc00381 98 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 15965975 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01610 151 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15966767 Common glpR PUTATIVE GLYCEROL-3-PHOSPHATE REGULON REPRESSOR TRANSCRIPTION REGULATOR PROTEIN SMc02521 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 15963809 Common hslV ATP-dependent protease peptidase subunit SMc02575 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 15964596 Common moaB PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN B SMc00863 170 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 15965290 Common - hypothetical protein SMc02059 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 15966180 Common - hypothetical protein SMc01747 5 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 15965318 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01226 77 COG0640 ArsR, Predicted transcriptional regulators Transcription 15966978 Common - hypothetical protein SMc03842 8 COG3832 COG3832, Uncharacterized conserved protein Function unknown 15965561 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00548 6 None None None 15966040 Common - hypothetical protein SMc01543 16 COG3629 DnrI, DNA-binding transcriptional activator of the SARP family Signal transduction mechanisms 15967032 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03896 57 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 15965785 Common fecR PUTATIVE IRON TRANSPORT REGULATOR TRANSMEMBRANE PROTEIN SMc04204 49 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 15965937 Common mraW S-adenosyl-methyltransferase MraW SMc01858 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 15965275 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein SMc02074 162 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 15965984 Common - hypothetical protein SMc01619 37 COG3347 COG3347, Uncharacterized conserved protein Function unknown 15965099 Common rplJ 50S ribosomal protein L10 SMc01319 209 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 15966661 Common - ATP-dependent DNA ligase SMc03177 100 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 15964339 Common - PUTATIVE COPPER-CONTAINING OXIDOREDUCTASE PROTEIN SMc02282 132 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 15964927 Common - HYPOTHETICAL ZINC FINGER DOMAIN C2H2 TYPE PROTEIN SMc00605 70 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15964972 Common - hypothetical protein SMc01781 32 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 15966022 Common fhuA2 PUTATIVE FERRICHROME-IRON RECEPTOR PRECURSOR PROTEIN SMc01657 105 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 15966206 Common - allantoate amidohydrolase SMc01820 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 15965222 Common cysG PROBABLE SIROHEME SYNTHASE PROTEIN SMc01053 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 15966193 Common mtlK PROBABLE MANNITOL 2-DEHYDROGENASE PROTEIN SMc01501 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 15964985 Common - PUTATIVE GLYCOSYLTRANSFERASE PROTEIN SMc01793 182 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 15965759 Common - hypothetical protein SMc04177 52 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15965369 Common - hypothetical protein SMc01177 13 COG5611 COG5611, Predicted nucleic-acid-binding protein, contains PIN domain General function prediction only 15966430 Common aroK PUTATIVE SHIKIMATE KINASE I PROTEIN SMc00695 201 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 15965322 Common lpsC PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE PROTEIN SMc01222 93 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 15964657 Common ctaC PUTATIVE CYTOCHROME C OXIDASE SUBUNIT II PROTEIN SMc00009 147 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 15964977 Common ihfA integration host factor subunit alpha SMc01786 199 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 15966601 Common glgX1 PROBABLE GLYCOSYL HYDROLASE PROTEIN SMc03926 129 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 15964204 Common - hypothetical protein SMc01715 37 COG1309 AcrR, Transcriptional regulator Transcription 15966836 Common - hypothetical protein SMc03235 32 COG4103 COG4103, Uncharacterized protein conserved in bacteria Function unknown 15963957 Common - hypothetical protein SMc02879 58 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 15964734 Common gcd PROBABLE GLUCOSE DEHYDROGENASE (PYRROLOQUINOLINE-QUINONE) PROTEIN SMc00110 61 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 15966993 Common ffh PROBABLE SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG) SMc03857 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 15965239 Common clpS ATP-dependent Clp protease adaptor protein ClpS SMc02110 118 COG2127 COG2127, Uncharacterized conserved protein Function unknown 15966657 Common lysS LYSYL-TRNA SYNTHETASE PROTEIN SMc03173 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 15964495 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00797 142 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15966162 Common dppF2 PUTATIVE DIPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc01529 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964718 Common - hypothetical protein SMc00041 9 None None None 15964008 Common rpsA 30S ribosomal protein S1 SMc00335 220 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 15963867 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04138 88 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15963776 Common - PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE PROTEIN SMc02771 201 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 15964900 Common gmk guanylate kinase SMc00577 213 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 15967061 Common dcp PROBABLE PEPTIDYL-DIPEPTIDASE A PROTEIN SMc04403 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 15964332 Common pncA PROBABLE PYRAZINAMIDASE/NICOTINAMIDASE (INCLUDES: PYRAZINAMIDASE, NICOTINAMIDASE) PROTEIN SMc02275 129 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 15967018 Common gst8 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc03882 68 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15965802 Common - PUTATIVE L-SORBOSONE DEHYDROGENASE (SNDH) PROTEIN SMc04291 62 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 15967046 Common - beta alanine--pyruvate transaminase SMc04388 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 15964587 Common atpI PUTATIVE FOF1 ATP SYNTHASE, SUBUNIT I TRANSMEMBRANE PROTEIN SMc00872 31 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 15966338 Common - PUTATIVE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02358 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 15966427 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00698 101 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 15966754 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03092 121 COG1522 Lrp, Transcriptional regulators Transcription 15963797 Common chvI TRANSCRIPTIONAL REGULATORY PROTEIN SMc02560 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15964959 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01768 22 COG1846 MarR, Transcriptional regulators Transcription 15964602 Common - PUTATIVE PROTEASE PROTEIN SMc00857 186 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15966969 Common - hypothetical protein SMc03833 35 COG3339 COG3339, Uncharacterized conserved protein Function unknown 15965243 Common - hypothetical protein SMc02106 224 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 15965327 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01217 181 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965110 Common rplD 50S ribosomal protein L4 SMc01308 221 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 15964702 Common betC CHOLINE SULFATASE PROTEIN SMc00127 77 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 15965096 Common nusG transcription antitermination protein NusG SMc01322 215 COG0250 NusG, Transcription antiterminator Transcription 15965026 Common nuoH NADH dehydrogenase subunit H SMc01921 189 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 15964948 Common - hypothetical protein SMc01757 85 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 15964903 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase SMc00580 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 15965258 Common lpxA UDP-N-acetylglucosamine acyltransferase SMc02091 180 COG1043 LpxA, Acyl- acyl carrier protein 15964106 Common iolD PUTATIVE MALONIC SEMIALDEHYDE OXIDATIVE DECARBOXYLASE PROTEIN SMc01166 220 COG3962 COG3962, Acetolactate synthase Amino acid transport and metabolism 15964590 Common atpF2 F0F1 ATP synthase subunit B' SMc00869 37 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 15963955 Common - hypothetical protein SMc02877 233 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 15966752 Common - PUTATIVE AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE PROTEIN SMc03094 22 COG3231 Aph, Aminoglycoside phosphotransferase Translation, ribosomal structure and biogenesis 15963860 Common - hypothetical protein SMc04145 187 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15966218 Common ureE urease accessory protein UreE SMc01832 63 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 15965121 Common rplE 50S ribosomal protein L5 SMc01297 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 15963875 Common - hypothetical protein SMc04130 30 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15966723 Common - PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN SMc03123 63 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 15966092 Common csaA PUTATIVE CHAPERONE PROTEIN SMc04456 135 COG0073 ARC1, EMAP domain General function prediction only 15963764 Common - hypothetical protein SMc02783 18 COG1396 HipB, Predicted transcriptional regulators Transcription 15964089 Common - hypothetical protein SMc00416 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 15964172 Common def peptide deformylase SMc01101 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 15963876 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04129 178 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15964834 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02642 7 None None None 15964987 Common - PUTATIVE POLYSACCHARIDE SYNTHESIS/TRANSPORT TRANSMEMBRANE PROTEIN SMc01795 89 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 15965315 Common - PUTATIVE ACETYLTRANSFERASE (ANTIBIOTIC RESISTANCE ) PROTEIN SMc01229 126 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 15966713 Common - PUTATIVE AMINO-ACID TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03133 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15965463 Common - hypothetical protein SMc00282 63 COG3803 COG3803, Uncharacterized protein conserved in bacteria Function unknown 15965986 Common fucA1 PUTATIVE L-FUCULOSE PHOSPHATE ALDOLASE PROTEIN SMc01621 141 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 15967089 Common gidB glucose-inhibited division protein B SMc02799 185 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 15966082 Common - hypothetical protein SMc01584 56 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 15964003 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc00330 133 COG2860 COG2860, Predicted membrane protein Function unknown 15964957 Common hemB delta-aminolevulinic acid dehydratase SMc01766 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 15965005 Common - PUTATIVE CYTOCHROME P450-LIKE MONOOXYGENASE PROTEIN SMc01812 78 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 15964055 Common - PROBABLE AMINOPEPTIDASE PROTEIN SMc00382 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 15965553 Common - PUTATIVE CARBOHYDRATE KINASE PROTEIN SMc00473 21 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 15967041 Common - hypothetical protein SMc04383 23 COG5383 COG5383, Uncharacterized protein conserved in bacteria Function unknown 15964352 Common hsdM PUTATIVE MODIFICATION ENZYME TRANSMEMBRANE PROTEIN SMc02296 161 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 15966165 Common dppB2 PUTATIVE DIPEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc01526 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15966792 Common priA primosome assembly protein PriA SMc02496 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 15966975 Common - hypothetical protein SMc03839 144 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 15963978 Common - hypothetical protein SMc02900 3 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 15964163 Common phrR DNA-BINDING PROTEIN SMc01110 40 COG1396 HipB, Predicted transcriptional regulators Transcription 15966838 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc03237 132 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964451 Common aglA PROBABLE ALPHA-GLUCOSIDASE PROTEIN SMc03064 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 15964333 Common pncB nicotinate phosphoribosyltransferase SMc02276 59 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 15966373 Common - hypothetical protein SMc02445 62 None None None 15965088 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01330 165 COG0583 LysR, Transcriptional regulator Transcription 15965831 Common - hypothetical protein SMc04363 81 COG1737 RpiR, Transcriptional regulators Transcription 15964307 Common mscL PROBABLE LARGE-CONDUCTANCE MECHANOSENSITIVE CHANNEL TRANSMEMBRANE PROTEIN SMc02250 138 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 15966644 Common - PROBABLE BETA-GLUCOSIDASE PROTEIN SMc03160 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 15966731 Common TRm5C PARTIAL TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc03115 36 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965560 Common - hypothetical protein SMc00466 41 COG3768 COG3768, Predicted membrane protein Function unknown 15964593 Common - hypothetical protein SMc00866 107 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 15964954 Common - hypothetical protein SMc01763 36 None None None 15966651 Common - PUTATIVE MULTIDRUG EFFLUX SYSTEM PROTEIN SMc03167 183 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964072 Common corA1 PROBABLE MAGNESIUM AND COBALT TRANSPORT TRANSMEMBRANE PROTEIN SMc00399 157 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 15964336 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02279 3 None None None 15965323 Common lpsD PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS GLYCOSYL TRANSFERASE PROTEIN SMc01221 201 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 15963859 Common - putative phosphoketolase SMc04146 65 COG3957 COG3957, Phosphoketolase Carbohydrate transport and metabolism 15964444 Common - hypothetical protein SMc03057 11 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 15964923 Common pgsA PROBABLE CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE TRANSMEMBRANE PROTEIN SMc00601 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15967048 Common - PUTATIVE L-SORBOSE DEHYDROGENASE, FAD DEPENDENT PROTEIN SMc04390 90 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 15964300 Common - hypothetical protein SMc02243 15 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 15966829 Common - YciI-like protein SMc03228 80 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 15965002 Common - hypothetical protein SMc01810 31 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 15965890 Common - hypothetical protein SMc01454 18 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 15965615 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00146 96 COG1846 MarR, Transcriptional regulators Transcription 15967011 Common - PUTATIVE FERREDOXIN PROTEIN SMc03875 160 COG1146 COG1146, Ferredoxin Energy production and conversion 15963929 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02851 69 COG1846 MarR, Transcriptional regulators Transcription 15964125 Common - hypothetical protein SMc01148 48 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 15964963 Common ribD PROBABLE RIBOFLAVIN BIOSYNTHESIS PROTEIN (DEAMINASE/REDUCTASE) SMc01772 226 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 15964396 Common cheY2 CHEMOTAXIS REGULATOR PROTEIN SMc03011 222 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 15966505 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc03968 113 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 15965138 Common - recombination factor protein RarA SMc01279 212 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 15966387 Common - hypothetical protein SMc00738 29 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 15964412 Common flgB flagellar basal body rod protein FlgB SMc03027 30 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 15965021 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01916 3 None None None 15965993 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc01628 45 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15965112 Common rplB 50S ribosomal protein L2 SMc01306 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 15964136 Common - hypothetical protein SMc01137 30 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 15966629 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02984 178 COG0583 LysR, Transcriptional regulator Transcription 15966003 Common - bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase SMc01638 150 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 15965404 Common mfd PROBABLE TRANSCRIPTION-REPAIR COUPLING FACTOR (TRCF) PROTEIN SMc04450 219 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 15966327 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02346 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 15966799 Common xerC site-specific tyrosine recombinase XerC SMc02489 221 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15966458 Common - hypothetical protein SMc00667 41 COG3758 COG3758, Uncharacterized protein conserved in bacteria Function unknown 15966737 Common - hypothetical protein SMc03109 133 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 15964411 Common - hypothetical protein SMc03026 8 None None None 15965078 Common TRm11a PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc01339 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965917 Common ligA NAD-dependent DNA ligase LigA SMc01878 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 15966207 Common dht dihydropyrimidinase SMc01821 205 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 15963911 Common mgsA methylglyoxal synthase SMc02834 87 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 15963821 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02587 249 COG4136 COG4136, ABC-type uncharacterized transport system, ATPase component General function prediction only 15964618 Common - hypothetical protein SMc00987 11 None None None 15964802 Common - histidinol-phosphate aminotransferase SMc02393 224 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 15965050 Common - hypothetical protein SMc01367 26 None None None 15963869 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04136 156 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15966047 Common - hypothetical protein SMc01742 34 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 15964079 Common - HYPOTHETICAL 4FE-4S FERREDOXINS, IRON-SULFUR BINDING REGION SIGNATURE PROTEIN SMc00406 135 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 15963785 Common TRm22 PROBABLE TRANSPOSASE PROTEIN SMc02762 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15965786 Common - PUTATIVE IRON/HEME TRANSPORT PROTEIN SMc04205 79 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 15966014 Common - hypothetical protein SMc01649 21 COG3602 COG3602, Uncharacterized protein conserved in bacteria Function unknown 15966695 Common - PUTATIVE 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE PROTEIN SMc03211 78 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 15964650 Common - PUTATIVE CHAPERONE PROTEIN SMc00003 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 15965280 Common - hypothetical protein SMc02069 135 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 15965264 Common exbB PROBABLE BIOPOLYMER TRANSPORT TRANSMEMBRANE PROTEIN SMc02085 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 15966680 Common modA PUTATIVE MOLYBDATE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc03196 150 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 15965223 Common - hypothetical protein SMc01054 6 None None None 15966489 Common - hypothetical protein SMc02940 137 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 15966074 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01570 122 COG0583 LysR, Transcriptional regulator Transcription 15965334 Nonpathogen - hypothetical protein SMc01210 1 None None None 15965848 Common - hypothetical protein SMc01491 43 COG3899 COG3899, Predicted ATPase General function prediction only 15966513 Common - hypothetical protein SMc03976 31 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 15965104 Common rpsL 30S ribosomal protein S12 SMc01314 238 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 15964082 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00409 2 None None None 15964760 Nonpathogen - hypothetical protein SMc00063 3 None None None 15966067 Common sigA RNA polymerase sigma factor RpoD SMc01563 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 15966190 Common - two-component response regulator SMc01504 107 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 15966052 Nonpathogen - hypothetical protein SMc01549 7 None None None 15965536 Common - PUTATIVE TRANSPORT PROTEIN SMc00536 226 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965798 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04280 8 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 15964890 Common rpsR 30S ribosomal protein S18 SMc00567 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 15965817 Common - hypothetical protein SMc04338 71 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15963990 Common nusA transcription elongation factor NusA SMc02912 220 COG0195 NusA, Transcription elongation factor Transcription 15965732 Nonpathogen - hypothetical protein SMc04333 7 None None None 15964855 Common - hypothetical protein SMc02561 15 COG5350 COG5350, Predicted protein tyrosine phosphatase General function prediction only 15964661 Common ctaG cytochrome C oxidase assembly protein SMc00012 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 15963853 Common - hypothetical protein SMc04152 13 None None None 15966965 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03829 88 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 15965533 Common - hypothetical protein SMc00487 76 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 15965418 Common - hypothetical protein SMc00240 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15964388 Common - hypothetical protein SMc03003 47 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15966250 Common - PUTATIVE SPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc01963 194 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 15965843 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01489 12 None None None 15966896 Common TRm26.3 PUTATIVE TRANSPOSASE NUMBER 3 FOR INSERTION SEQUENCE ISRM26 SMc03298 61 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 15963889 Common TRm22 PUTATIVE TRANSPOSASE PROTEIN SMc04116 22 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15964603 Common - hypothetical protein SMc00856 3 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15965157 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01260 101 COG0789 SoxR, Predicted transcriptional regulators Transcription 15966139 Common - hypothetical protein SMc02724 173 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 15964821 Common - HYPOTHETICAL UNKNOWN PROTEIN SMc02656 3 None None None 15964789 Common - PUTATIVE OXIDOREDUCTASE TRANSMEMBRANE PROTEIN SMc02380 129 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 15965347 Nonpathogen - hypothetical protein SMc01199 3 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 15964250 Nonpathogen - hypothetical protein SMc02199 7 None None None 15966346 Common - PUTATIVE PEPTIDE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc02417 198 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966034 Common - enoyl-CoA hydratase SMc01669 183 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 15966649 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03165 101 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15966027 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01662 188 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15966741 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase SMc03105 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 15965912 Common - hypothetical protein SMc01883 4 COG4541 COG4541, Predicted membrane protein Function unknown 15966409 Common - hypothetical protein SMc00716 35 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 15964101 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00429 62 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15966200 Common - putative oxidoreductase SMc01814 185 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 15966392 Common - short chain dehydrogenase SMc00733 232 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 15966687 Common bkdB branched-chain alpha-keto acid dehydrogenase subunit E2 SMc03203 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15964427 Common motB flagellar motor protein MotB SMc03042 98 COG1360 MotB, Flagellar motor protein Cell motility and secretion 15966926 Common - hypothetical protein SMc03790 22 COG4544 COG4544, Uncharacterized conserved protein Function unknown 15966487 Common - PUTATIVE PHOSPHOSUGAR ISOMERASE PROTEIN SMc00637 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 15964453 Common - HYPOTHETICAL UNKNOWN PROTEIN SMc03066 3 None None None 15964877 Common purF amidophosphoribosyltransferase SMc00554 239 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 15965226 Common fpr PROBABLE FERREDOXIN--NADP REDUCTASE PROTEIN SMc02122 102 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 15965471 Common cspA5 PUTATIVE COLD SHOCK TRANSCRIPTION REGULATOR PROTEIN SMc00289 155 COG1278 CspC, Cold shock proteins Transcription 15964329 Common rkpG ACYL-TRANSFERASE TRANSFERASE PROTEIN SMc02272 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 15966744 Common - PUTATIVE CARBON MONOXIDE DEHYDROGENASE LARGE SUBUNIT TRANSMEMBRANE PROTEIN SMc03102 106 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 15966351 Common - PUTATIVE OLIGOPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02423 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965501 Common - hypothetical protein SMc00519 72 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 15965193 Common pyrG CTP synthetase SMc01025 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 15965204 Common - hypothetical protein SMc01036 12 COG2261 COG2261, Predicted membrane protein Function unknown 15964119 Common - enoyl-CoA hydratase SMc01153 188 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 15965702 Common - PUTATIVE PEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc04288 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15965679 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04256 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15963777 Common - hypothetical protein SMc02770 44 COG4553 DepA, Poly-beta-hydroxyalkanoate depolymerase Lipid metabolism 15966762 Common fdsA PROBABLE NAD-DEPENDENT FORMATE DEHYDROGENASE ALPHA SUBUNIT PROTEIN SMc04444 216 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 15965776 Common - hypothetical protein SMc04440 6 None None None 15965751 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04169 129 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 15963921 Common nth PROBABLE ENDONUCLEASE III PROTEIN SMc02843 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 15966958 Common - hypothetical protein SMc03822 72 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 15966589 Common - hypothetical protein SMc04053 9 None None None 15964547 Common - hypothetical protein SMc00911 28 COG4275 COG4275, Uncharacterized conserved protein Function unknown 15964065 Common - hypothetical protein SMc00392 14 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 15965823 Common - PUTATIVE MULTIDRUG EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc04350 172 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 15965725 Common - PUTATIVE AMINOTRANSFERASE PROTEIN SMc04326 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15964771 Common cycJ cytochrome c-type biogenesis protein CcmE SMc02362 94 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 15965041 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc01376 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 15966222 Common - hypothetical protein SMc01836 31 COG2944 COG2944, Predicted transcriptional regulator Transcription 15965385 Nonpathogen - hypothetical protein SMc00940 1 None None None 15965603 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00158 19 COG4655 COG4655, Predicted membrane protein Function unknown 15965698 Common cobB cobyrinic acid a,c-diamide synthase SMc04282 137 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 15964287 Common - PUTATIVE ACYL-COA DEHYDROGENASE PROTEIN SMc02229 155 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 15966615 Common pntAa PROBABLE PROTON-TRANSLOCATING NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT PROTEIN SMc03950 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 15966952 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03816 160 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 15964229 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02171 91 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15964781 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02372 61 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965635 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc04212 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15967033 Common TRm1b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc03948 72 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964842 Common - hypothetical protein SMc02634 69 COG3211 PhoX, Predicted phosphatase General function prediction only 15966147 Common - hypothetical protein SMc02732 47 COG2852 COG2852, Uncharacterized protein conserved in bacteria Function unknown 15965657 Common csp4 PUTATIVE COLD SHOCK-LIKE TRANSCRIPTION REGULATOR PROTEIN SMc04234 175 COG1278 CspC, Cold shock proteins Transcription 15964404 Common fliG flagellar motor switch protein G SMc03019 122 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 15965655 Nonpathogen - HYPOTHETICAL GLYCINE RICH TRANSMEMBRANE PROTEIN SMc04232 1 COG4907 COG4907, Predicted membrane protein Function unknown 15964375 Nonpathogen - hypothetical protein SMc02316 2 None None None 15965771 Nonpathogen - hypothetical protein SMc04189 1 None None None 15964159 Common - HYPOTHETICAL PHOH-LIKE PROTEIN SMc01114 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 15963933 Common - hypothetical protein SMc02855 89 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15965178 Common thrS threonyl-tRNA synthetase SMc01010 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15967004 Common - hypothetical protein SMc03868 12 None None None 15965340 Common - PUTATIVE AMINO-ACID-BINDING PERIPLASMIC SIGNAL PEPTIDE PROTEIN SMc01205 148 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15964555 Common - hypothetical protein SMc00902 210 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 15965650 Common mcpV PROBABLE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS) TRANSMEMBRANE PROTEIN SMc04227 153 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15965709 Common cobO cob(I)yrinic acid a,c-diamide adenosyltransferase SMc04302 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 15966020 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01655 172 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 15965570 Common fbcC PUTATIVE CYTOCHROME C1 PROTEIN SMc00189 69 COG2857 CYT1, Cytochrome c1 Energy production and conversion 15963984 Common - hypothetical protein SMc02906 169 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 15964345 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02328 1 None None None 15964258 Common - hypothetical protein SMc02150 76 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 15963814 Common - hypothetical protein SMc02580 116 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15964110 Common - hypothetical protein SMc01162 56 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 15965440 Common - hypothetical protein SMc00259 8 None None None 15964039 Common pheT phenylalanyl-tRNA synthetase subunit beta SMc00366 227 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 15964969 Common nusB transcription antitermination protein NusB SMc01778 185 COG0781 NusB, Transcription termination factor Transcription 15965673 Common TRm20 PUTATIVE TRANSPOSASE PROTEIN SMc04250 84 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965572 Common fbcF PROBABLE UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT PROTEIN SMc00187 101 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 15964244 Common - PUTATIVE INTEGRASE DNA PROTEIN SMc02187 92 COG0582 XerC, Integrase DNA replication, recombination, and repair 15965309 Common - hypothetical protein SMc01236 90 COG1801 COG1801, Uncharacterized conserved protein Function unknown 15964682 Common - hypothetical protein SMc00022 21 COG5389 COG5389, Uncharacterized protein conserved in bacteria Function unknown 15964166 Common - hypothetical protein SMc01107 13 COG5568 COG5568, Uncharacterized small protein Function unknown 15964491 Common - PUTATIVE PERMEASE PROTEIN SMc00793 147 COG0628 PerM, Predicted permease General function prediction only 15966124 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc02709 2 None None None 15963754 Common - hypothetical protein SMc02793 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 15964999 Common - hypothetical protein SMc01807 58 COG2510 COG2510, Predicted membrane protein Function unknown 15966995 Common rpsP 30S ribosomal protein S16 SMc03859 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 15966613 Common pntB PROBABLE NAD(P) TRANSHYDROGENASE SUBUNIT BETA TRANSMEMBRANE PROTEIN SMc03938 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 15963795 Common - hypothetical protein SMc02752 69 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 15966300 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02035 66 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 15964628 Common - PUTATIVE ACYL-COA DEHYDROGENASE PROTEIN SMc00977 145 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 15965740 Nonpathogen - hypothetical protein SMc04345 1 None None None 15964512 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00814 66 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 15964521 Common - hypothetical protein SMc00823 36 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 15966936 Common - hypothetical protein SMc03800 29 COG3760 COG3760, Uncharacterized conserved protein Function unknown 15964699 Common - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc00031 14 None None None 15965723 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04315 169 COG0583 LysR, Transcriptional regulator Transcription 15964158 Common - hypothetical protein SMc01115 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 15964787 Common - PUTATIVE PERIPLASMIC BINDING TRANSMEMBRANE PROTEIN SMc02378 31 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 15964358 Nonpathogen TRm30.2 PUTATIVE TRANSPOSASE NUMBER 2 FOR INSERTION SEQUENCE ISRM30 SMc02302 6 None None None 15966944 Common ftsK PUTATIVE CELL DIVISION TRANSMEMBRANE PROTEIN SMc03808 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 15964476 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00778 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964208 Common - hypothetical protein SMc01711 15 COG1470 COG1470, Predicted membrane protein Function unknown 15963836 Common soxA1 PUTATIVE SARCOSINE OXIDASE ALPHA SUBUNIT TRANSMEMBRANE PROTEIN SMc02606 181 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15965767 Nonpathogen - hypothetical protein SMc04184 1 None None None 15964182 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01092 121 COG0583 LysR, Transcriptional regulator Transcription 15965999 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01634 150 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 15964045 Common - short chain dehydrogenase SMc00372 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966189 Common - hypothetical protein SMc01505 5 None None None 15964230 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02170 153 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15963982 Common - hypothetical protein SMc02904 54 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 15964197 Common - putative inner membrane protein translocase component YidC SMc01721 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 15964218 Common - hypothetical protein SMc01701 128 COG1739 COG1739, Uncharacterized conserved protein Function unknown 15965749 Common - PUTATIVE HISTIDINE-RICH TRANSPORTER TRANSMEMBRANE PROTEIN SMc04167 155 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 15964340 Common - PUTATIVE COPPER-CONTAINING OXIDOREDUCTASE SIGNAL PEPTIDE PROTEIN SMc02283 31 COG4454 COG4454, Uncharacterized copper-binding protein Inorganic ion transport and metabolism 15967086 Common holA DNA polymerase III subunit delta SMc02802 43 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 15967006 Common thiP thiamin transporter membrane protein SMc03870 69 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 15964866 Common - hypothetical protein SMc02549 68 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15966454 Common hisW HISTIDINE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc00671 183 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 15964289 Common - hypothetical protein SMc02231 67 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 15964690 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00027 3 None None None 15965366 Common - hypothetical protein SMc01180 7 None None None 15965329 Common carB carbamoyl phosphate synthase large subunit SMc01215 234 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 15963989 Common - hypothetical protein SMc02911 169 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 15965828 Common - hypothetical protein SMc04360 20 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 15964673 Common - PUTATIVE PROCESSING PROTEASE PROTEIN SMc00451 184 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 15966868 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03263 1 None None None 15966194 Common smoS sorbitol dehydrogenase SMc01500 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964369 Common - zinc-binding protein SMc02312 30 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 15966533 Common thiE2 thiamine-phosphate pyrophosphorylase SMc03996 50 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 15966985 Common ccmC PUTATIVE HEME EXPORTER C (CYTOCHROME C-TYPE BIOGENESIS PROTEIN) TRANSMEMBRANE SMc03849 123 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 15965662 Nonpathogen - hypothetical protein SMc04239 2 None None None 15966361 Common clpB PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) SMc02433 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 15964262 Common - PUTATIVE PHOSPHATE-BINDING PERIPLASMIC PROTEIN SMc02146 131 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 15965149 Common lipB lipoyltransferase SMc01268 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 15966511 Common - hypothetical protein SMc03974 184 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 15965035 Common - hypothetical protein SMc01930 90 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15964553 Common - PUTATIVE DEAMINASE PROTEIN SMc00905 199 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 15965710 Common cobN cobaltochelatase SMc04303 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 15966319 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02338 107 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15966903 Nonpathogen - hypothetical protein SMc03765 1 None None None 15963939 Common pit PHOSPHATE TRANSPORT TRANSMEMBRANE PROTEIN SMc02861 166 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 15965563 Common folB PROBABLE DIHYDRONEOPTERIN ALDOLASE DHNA LYASE FOLATE BIOSYNTHESIS PROTEIN SMc00463 75 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 15965044 Common dinP DNA polymerase IV SMc01373 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 15965521 Common - hypothetical protein SMc00499 76 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 15966600 Common pgm phosphoglucomutase SMc03925 224 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 15965063 Common - metal-dependent hydrolase SMc01354 87 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 15966977 Common clpP ATP-dependent Clp protease proteolytic subunit SMc03841 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15966694 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03210 154 COG1522 Lrp, Transcriptional regulators Transcription 15964910 Common gal PUTATIVE D-GALACTOSE 1-DEHYDROGENASE PROTEIN SMc00588 137 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15966598 Common glgC glucose-1-phosphate adenylyltransferase SMc03923 166 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 15965372 Common cysK2 cysteine synthase A SMc01174 225 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 15964573 Nonpathogen - hypothetical protein SMc00886 12 COG5598 COG5598, Trimethylamine:corrinoid methyltransferase Coenzyme metabolism 15964493 Common - hypothetical protein SMc00795 4 None None None 15964736 Common - hypothetical protein SMc00112 11 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 15964034 Common - hypothetical protein SMc00361 44 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15965373 Common - hypothetical protein SMc01173 223 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 15966446 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00679 117 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15964317 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02260 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 15966906 Nonpathogen - hypothetical protein SMc03768 1 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 15966729 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc03117 94 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 15965625 Common - PUTATIVE AMINO ACID TRANSPORT SYSTEM PERMEASE PROTEIN SMc00138 173 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 15965875 Common - hypothetical protein SMc01439 20 COG3603 COG3603, Uncharacterized conserved protein Function unknown 15966671 Common cobM PROBABLE PRECORRIN-4 C11-METHYLTRANSFERASE PROTEIN SMc03187 201 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 15963948 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02870 134 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 161621434 Common accC acetyl-CoA carboxylase biotin carboxylase subunit SMc01345 236 COG0439 AccC, Biotin carboxylase Lipid metabolism 15964562 Common - hypothetical protein SMc00895 24 None None None 15965579 Common - hypothetical protein SMc00181 9 None None None 15966468 Common - hypothetical protein SMc00657 27 None None None 15966348 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN SMc02419 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964840 Common - hypothetical protein SMc02636 78 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15965980 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01615 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 15966804 Common - PUTATIVE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN SMc02484 116 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15965450 Common - PUTATIVE TRANSKETOLASE BETA SUBUNIT PROTEIN SMc00269 228 COG3958 COG3958, Transketolase, C-terminal subunit Carbohydrate transport and metabolism 15963963 Common msrA1 methionine sulfoxide reductase A SMc02885 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 15964726 Common sodB PROBABLE SUPEROXIDE DISMUTASE FE PROTEIN SMc00043 207 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 15966436 Common - HYPOTHETICAL LIPOPROTEIN SMc00689 54 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 15965873 Common - PUTATIVE ACETYL TRANSFERASE PROTEIN SMc01437 110 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15964754 Common - hypothetical protein SMc00456 11 None None None 15964882 Common - hypothetical protein SMc00559 99 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 15965311 Common ssb single-strand DNA-binding protein SMc01233 201 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 15964794 Nonpathogen - hypothetical protein SMc02385 5 None None None 15966532 Common - hypothetical protein SMc03995 95 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 15966701 Common - HYPOTHETICAL UNKNOWN PROTEIN SMc03145 6 None None None 15966843 Common typA PROBABLE GTP-BINDING PROTEIN (TYROSINE PHOSPHORYLATED PROTEIN A) SMc03242 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 15966809 Common mdh malate dehydrogenase SMc02479 188 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 15966571 Common - PUTATIVE DIPEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04035 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964897 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II SMc00574 211 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15964276 Common - 2'-deoxycytidine 5'-triphosphate deaminase SMc02218 55 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 15965819 Common cyaJ PUTATIVE ADENYLATE/GUANYLATE CYCLASE TRANSMEMBRANE PROTEIN SMc04343 46 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 15965270 Common - PUTATIVE OUTER MEMBRANE PROTEIN SMc02079 38 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 15965939 Common - PUTATIVE SARCOSINE OXIDASE PROTEIN SMc01856 6 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15964206 Nonpathogen - hypothetical protein SMc01713 2 None None None 15965057 Common pyrB aspartate carbamoyltransferase catalytic subunit SMc01360 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 15964929 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00607 10 COG5511 COG5511, Bacteriophage capsid protein General function prediction only 15963790 Common - hypothetical protein SMc02757 205 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 15966494 Common tolR PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc03957 139 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 15964446 Common folD2 PROBABLE BIFUNCTIONAL PROTEIN : METHYLENETETRAHYDROFOLATE DEHYDROGENASE ; METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE SMc03059 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 15966858 Common - hypothetical protein SMc03251 35 COG3367 COG3367, Uncharacterized conserved protein Function unknown 15967059 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04401 129 COG1609 PurR, Transcriptional regulators Transcription 15964743 Nonpathogen - hypothetical protein SMc00116 3 None None None 15965007 Common - hypothetical protein SMc04448 140 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15965680 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04257 151 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15966784 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02504 151 COG1522 Lrp, Transcriptional regulators Transcription 15966175 Common - hypothetical protein SMc01518 35 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 15966270 Common coxN PROBABLE ALTERNATIVE CYTOCHROME C OXIDASE POLYPEPTIDE I TRANSMEMBRANE PROTEIN SMc01983 172 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 15965926 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01869 144 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 15963801 Common alkB PROBABLE DNA REPAIR SYSTEM SPECIFIC FOR ALKYLATED DNA PROTEIN SMc02566 56 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 15966265 Common - PUTATIVE SUGAR TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc01978 181 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15965214 Common ntrX PROBABLE NITROGEN REGULATION PROTEIN SMc01045 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15965609 Common rpiA ribose-5-phosphate isomerase A SMc00152 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 15965713 Nonpathogen - hypothetical protein SMc04306 11 COG4254 COG4254, Uncharacterized protein conserved in bacteria Function unknown 15965588 Common - PUTATIVE TARNSPORT PROTEIN TRANSMEMBRANE SMc00172 101 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966443 Common hipO1 PUTATIVE HIPPURATE HYDROLASE PROTEIN SMc00682 167 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 15965717 Nonpathogen - hypothetical protein SMc04310 1 None None None 15965987 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01622 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 15964123 Common - hypothetical protein SMc01150 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 15965201 Common - PROBABLE ARYLESTERASE PROTEIN SMc01033 13 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 15965124 Common rplF 50S ribosomal protein L6 SMc01294 240 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 15964290 Common - hypothetical protein SMc02232 92 COG0730 COG0730, Predicted permeases General function prediction only 15964645 Common - hypothetical protein SMc00960 169 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 15964814 Common - hypothetical protein SMc02406 69 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 15964026 Common exoD PUTATIVE TRANSMEMBRANE PROTEIN SMc00353 25 COG3932 COG3932, Uncharacterized ABC-type transport system, permease components General function prediction only 15964017 Common - hypothetical protein SMc00344 41 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 15966001 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01636 89 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 15966105 Common - hypothetical protein SMc02690 75 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 15965160 Common - hypothetical protein SMc01257 24 COG3821 COG3821, Predicted membrane protein Function unknown 15965602 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00159 10 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 15964487 Common dppD1 PROBABLE DIPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc00789 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965765 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04183 6 COG4678 COG4678, Muramidase (phage lambda lysozyme) Carbohydrate transport and metabolism 15965800 Common - hypothetical protein SMc04287 76 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 15965930 Common ftsW PROBABLE CELL DIVISION PROTEIN FTSW PEPTIDOGLYCAN SYNTHESIS SMc01865 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 15965667 Common znuC PROBABLE HIGH-AFFINITY ZINC UPTAKE SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc04244 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 15964484 Common dppA1 PROBABLE PERIPLASMIC DIPEPTIDE-BINDING PROTEIN SMc00786 207 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966891 Common - hypothetical protein SMc03293 12 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15967030 Common - PUTATIVE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN SMc03894 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 15965094 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01324 221 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15965966 Common - hypothetical protein SMc01594 223 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 15964096 Common - hypothetical protein SMc00424 110 COG2962 RarD, Predicted permeases General function prediction only 15964480 Common - hypothetical protein SMc00782 35 COG4269 COG4269, Predicted membrane protein Function unknown 15963882 Common deoD purine nucleoside phosphorylase SMc04123 165 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 15964462 Common mcpZ PROBABLE METHYL-ACCEPTING CHEMOTAXIS PROTEIN SMc00765 139 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 161621427 Common cobK cobalt-precorrin-6x reductase SMc03189 48 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 15965435 Nonpathogen - hypothetical protein SMc04437 1 None None None 15965011 Common hrm HISTONE-LIKE PROTEIN SMc01906 204 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 15964934 Common - hypothetical protein SMc00612 10 COG3946 VirJ, Type IV secretory pathway, VirJ component Intracellular trafficking and secretion 15963953 Common - hypothetical protein SMc02875 56 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 15964992 Common - PUTATIVE CYTOCHROME C OXIDASE ASSEMBLY TRANSMEMBRANE PROTEIN SMc01800 65 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 15963903 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02826 18 COG1846 MarR, Transcriptional regulators Transcription 15964104 Common iolB PUTATIVE MYO-INOSITOL CATABOLISM PROTEIN SMc00432 52 COG3718 IolB, Uncharacterized enzyme involved in inositol metabolism Carbohydrate transport and metabolism 15965862 Common - hypothetical protein SMc01426 75 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15965407 Common - hypothetical protein SMc00229 81 COG2928 COG2928, Uncharacterized conserved protein Function unknown 15965809 Common afuA IRON-BINDING PERIPLASMIC PROTEIN SMc04317 104 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 15964623 Common - PUTATIVE DIOXYGENASE PROTEIN SMc00982 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 15966059 Nonpathogen - hypothetical protein SMc01555 1 None None None 15965132 Common rpsK 30S ribosomal protein S11 SMc01286 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 15965249 Common tsf elongation factor Ts SMc02100 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 15964226 Common - hypothetical protein SMc02174 67 COG2259 COG2259, Predicted membrane protein Function unknown 15966247 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01960 121 COG0431 COG0431, Predicted flavoprotein General function prediction only 15965015 Common - hypothetical protein SMc01910 33 COG4717 COG4717, Uncharacterized conserved protein Function unknown 15965541 Common - hypothetical protein SMc00484 32 COG0433 COG0433, Predicted ATPase General function prediction only 15964010 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00337 4 None None None 15966019 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01654 214 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 15965493 Common - hypothetical protein SMc00525 27 None None None 15964528 Common - hypothetical protein SMc00830 41 COG4949 COG4949, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 15966591 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04055 128 COG0583 LysR, Transcriptional regulator Transcription 15965359 Common rlpA PUTATIVE RARE LIPOPROTEIN A PRECURSOR SMc01187 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 15966240 Common - PUTATIVE 2-COMPONENT RECEIVER DOMAIN PROTEIN SMc01953 29 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15965990 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc01625 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966922 Common bfr PROBABLE BACTERIOFERRITIN (BFR) (CYTOCHROME B-1) (CYTOCHROME B-557) PROTEIN SMc03786 109 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 15966097 Common - hypothetical protein SMc02682 94 COG1565 COG1565, Uncharacterized conserved protein Function unknown 15966412 Common chaC PUTATIVE CATION TRANSPORT PROTEIN SMc00713 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 15967078 Common htpX heat shock protein HtpX SMc04091 190 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 15966252 Common - PUTATIVE SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc01965 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 15966620 Common pckR PUTATIVE PHOSPHOENOLPYRUVATE CARBOXYKINASE REGULATOR TRANSCRIPTION REGULATOR PROTEIN SMc02975 127 COG1609 PurR, Transcriptional regulators Transcription 15964634 Common - hypothetical protein SMc00971 146 COG1741 COG1741, Pirin-related protein General function prediction only 15965852 Common - hypothetical protein SMc01416 14 COG4190 COG4190, Predicted transcriptional regulator Transcription 15965303 Common - SIGNAL PEPTIDE PROTEIN SMc01242 84 COG4549 COG4549, Uncharacterized protein conserved in bacteria Function unknown 15965906 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01470 2 None None None 15966406 Common hpt hypoxanthine-guanine phosphoribosyltransferase SMc00719 140 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 15964298 Common - hypothetical protein SMc02241 39 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 15966524 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc03987 64 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964057 Common - PUTATIVE TRANSCRIPTION REGULATION PROTEIN SMc00384 40 COG1846 MarR, Transcriptional regulators Transcription 15965517 Common - hypothetical protein SMc00503 47 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 15965613 Common - hypothetical protein SMc00148 40 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 15966369 Common - hypothetical protein SMc02441 47 COG5319 COG5319, Uncharacterized protein conserved in bacteria Function unknown 15966461 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00664 1 None None None 15964942 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00620 27 COG4222 COG4222, Uncharacterized protein conserved in bacteria Function unknown 15965943 Common pfk pyrophosphate--fructose-6-phosphate 1-phosphotransferase SMc01852 150 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 15965232 Common metC cystathionine beta-lyase SMc02117 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 15964301 Common dinF PUTATIVE TRANSMEMBRANE PROTEIN SMc02244 86 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 15966548 Common tacA PUTATIVE SIGMA-54-DEPENDENT TRANSCRIPTION REGULATOR PROTEIN SMc04011 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15966123 Common - hypothetical protein SMc02708 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15966142 Common - hypothetical protein SMc02727 36 COG3921 COG3921, Uncharacterized protein conserved in bacteria Function unknown 15966824 Common sdhD PROBABLE SUCCINATE DEHYDROGENASE MEMBRANE ANCHOR SUBUNIT PROTEIN SMc02464 40 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 15964889 Common - hypothetical protein SMc00566 12 None None None 15964398 Common - hypothetical protein SMc03013 3 None None None 15965262 Common gltA type II citrate synthase SMc02087 194 COG0372 GltA, Citrate synthase Energy production and conversion 15963775 Common - PUTATIVE SUGAR ABC TRANSPORTER PERMEASE PROTEIN SMc02772 169 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15964925 Common - short chain dehydrogenase SMc00603 228 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964070 Common - hypothetical protein SMc00397 49 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 15965910 Common - PUTATIVE AMINOPEPTIDASE P PROTEIN SMc01885 238 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 15964311 Common qxtB PUTATIVE QUINOL OXIDASE SUBUNIT II TRANSMEMBRANE PROTEIN SMc02254 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 15965886 Common - hypothetical protein SMc01450 40 COG3814 COG3814, Uncharacterized protein conserved in bacteria Function unknown 15966089 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01592 51 COG1846 MarR, Transcriptional regulators Transcription 15964077 Common - hypothetical protein SMc00404 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 15966679 Common ung uracil-DNA glycosylase SMc03195 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 15964188 Common - hypothetical protein SMc01730 45 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 15965503 Common - hypothetical protein SMc00517 108 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 15965478 Common phbC POLY3-HYDROXYBUTYRATE POLYMERASE PROTEIN SMc00296 73 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 15966738 Common - HYPOTHETICAL CALCIUM-BINDING PROTEIN SMc03108 82 None None None 15966057 Common - PUTATIVE ACYL CARRIER PROTEIN SMc01553 11 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15966279 Common - PUTATIVE ALCOHOL DEHYDROGENASE PROTEIN SMc01992 202 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 15966733 Common TRm5N PARTIAL TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc03113 84 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15963857 Common - PUTATIVE AMINOMETHYLTRANSFERASE PROTEIN SMc04148 180 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15965921 Common ftsZ1 cell division protein FtsZ SMc01874 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 15966627 Common - hypothetical protein SMc02982 47 COG3153 COG3153, Predicted acetyltransferase General function prediction only 15964955 Common - arginyl-tRNA-protein transferase SMc01764 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 15965114 Common rplV 50S ribosomal protein L22 SMc01304 216 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 15964961 Common glyA serine hydroxymethyltransferase SMc01770 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 15966325 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc02344 103 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 15964641 Common - hypothetical protein SMc00964 84 COG1268 BioY, Uncharacterized conserved protein General function prediction only 15964648 Common pdxH pyridoxamine 5'-phosphate oxidase SMc00069 135 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 15966209 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc01823 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 15966069 Common kbl 2-amino-3-ketobutyrate coenzyme A ligase SMc01565 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 15965237 Common - HYPOTHETICAL UNKNOWN PROTEIN SMc02112 18 None None None 15965055 Common - hypothetical protein SMc01362 168 COG0344 COG0344, Predicted membrane protein Function unknown 15965633 Common - hypothetical protein SMc04210 58 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 15964080 Common gst4 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc00407 85 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15963959 Common - hypothetical protein SMc02881 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 15964652 Common - hypothetical protein SMc00006 153 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 15965081 Common rne PROBABLE RIBONUCLEASE E PROTEIN SMc01336 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 15966381 Common - PUTATIVE TRANSPORT PROTEIN TRANSMEMBRANE SMc00744 159 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966309 Nonpathogen - hypothetical protein SMc02044 5 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 15966854 Common - PUTATIVE TRANSPOSASE PROTEIN SMc03248 153 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965788 Common - PUTATIVE TOXIN SECRETION ATP-BINDING ABC TRANSPORTER PROTEIN SMc04207 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 15965402 Common xthA1 PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN SMc00956 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 15964832 Common cfa2 PUTATIVE CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE PROTEIN SMc02645 143 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 15964946 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01755 64 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964359 Nonpathogen TRm30.1 PUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM30 SMc04430 2 None None None 15965780 Nonpathogen - hypothetical protein SMc04199 1 None None None 15965256 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase SMc02093 152 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 15964705 Common - hypothetical protein SMc00033 164 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 15964108 Common - hypothetical protein SMc01164 61 COG1737 RpiR, Transcriptional regulators Transcription 15965795 Common - hypothetical protein SMc04272 12 None None None 15964005 Common - hypothetical protein SMc00332 17 COG4530 COG4530, Uncharacterized protein conserved in bacteria Function unknown 15966045 Common lldD1 PUTATIVE L-LACTATE DEHYDROGENASE (CYTOCHROME) PROTEIN SMc01740 110 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 15966750 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc03096 114 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 15964475 Nonpathogen - hypothetical protein SMc00777 8 COG5490 COG5490, Uncharacterized conserved protein Function unknown 15966167 Common - PUTATIVE DIPEPTIDASE PROTEIN SMc01524 103 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 15966811 Common - hypothetical protein SMc02477 82 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 15963908 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02831 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 15964970 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01779 49 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966817 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02471 75 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15967071 Common cynT PUTATIVE CARBONIC ANHYDRASE PROTEIN SMc04083 149 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 15963873 Common - hypothetical protein SMc04132 21 None None None 15965551 Common alaS alanyl-tRNA synthetase SMc00475 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15966438 Common - hypothetical protein SMc00687 61 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 15964674 Common thrC1 threonine synthase SMc00077 170 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 15964368 Common maf Maf-like protein SMc02311 183 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 15965652 Common - hypothetical protein SMc04229 7 None None None 15963893 Common cpaB1 PUTATIVE PILUS ASSEMBLY SIGNAL PEPTIDE PROTEIN SMc04112 62 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 15966202 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01816 213 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 15964679 Common ccrM ADENINE DNA METHYLTRANSFERASE PROTEIN SMc00021 142 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 15964980 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01789 2 None None None 15965513 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00507 3 None None None 15964952 Common parC DNA topoisomerase IV subunit A SMc01761 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 15966773 Common - hypothetical protein SMc02515 25 COG5477 COG5477, Predicted small integral membrane protein Function unknown 15966567 Common pip2 PUTATIVE PROLINE IMINOPEPTIDASE PROTEIN SMc04031 60 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15966720 Common - PUTATIVE TRANSPORT SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc03126 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 15964765 Nonpathogen - hypothetical protein SMc00123 11 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 15964533 Common - PUTATIVE SIGNAL PEPTIDE PROTEIN SMc00925 84 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15967074 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04087 72 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 15965142 Common rluC PROBABLE RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE C PROTEIN SMc01275 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 15967043 Common - PUTATIVE ALDEHYDE DEHYDROGENASE TRANSMEMBRANE PROTEIN SMc04385 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15965247 Common - hypothetical protein SMc02102 19 None None None 15966593 Common - hypothetical protein SMc04057 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 15964510 Common - hypothetical protein SMc00812 60 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 15965153 Nonpathogen - hypothetical protein SMc01264 1 None None None 15964730 Common cycG PUTATIVE DIHEME CYTOCHROME C-TYPE SIGNAL PEPTIDE PROTEIN SMc00086 53 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 15963826 Common - hypothetical protein SMc02592 5 None None None 15966211 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01825 131 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 15963758 Common dnaQ DNA polymerase III subunit epsilon SMc02789 198 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 15965971 Common - PUTATIVE PERMEASE PROTEIN SMc01606 162 COG4132 COG4132, ABC-type uncharacterized transport system, permease component General function prediction only 15964916 Common ligE PUTATIVE BETA-ETHERASE (BETA-ARYL ETHER CLEAVING ENZYME) PROTEIN SMc00594 24 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15964471 Common - hypothetical protein SMc00838 21 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 15967080 Common acsA1 acetyl-CoA synthetase SMc04093 214 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 15966292 Common - PUTATIVE DIPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02027 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15965445 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00264 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964575 Common ilvD1 dihydroxy-acid dehydratase SMc00884 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 15964243 Common - hypothetical protein SMc02156 10 COG4588 AcfC, Accessory colonization factor AcfC, contains ABC-type periplasmic domain General function prediction only 15966961 Common - PUTATIVE TRANSPORT PROTEIN SMc03825 228 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964112 Common - hypothetical protein SMc01160 63 COG1959 COG1959, Predicted transcriptional regulator Transcription 15965856 Common - hypothetical protein SMc01420 25 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 15966580 Common - PUTATIVE 2-COMPONENT RECEIVER DOMAIN PROTEIN SMc04044 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15964862 Common - hypothetical protein SMc02553 106 COG2135 COG2135, Uncharacterized conserved protein Function unknown 15965425 Common pcs PHOSPHATIDYLCHOLINE SYNTHASE PROTEIN SMc00247 29 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 15965420 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00242 94 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 15963832 Common - hypothetical protein SMc02600 80 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 15965523 Common - HYPOTHETICAL TRAMSMEMBRANE PROTEIN SMc00497 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 15963807 Common - hypothetical protein SMc02573 5 None None None 15966281 Common - PUTATIVE FERREDOXIN REDUCTASE PROTEIN SMc02016 194 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 15965000 Common - hypothetical protein SMc01808 117 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 15965726 Common - hypothetical protein SMc04327 43 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 15966154 Common opuA PUTATIVE GLYCINE BETAINE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02739 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 15964545 Common groEL chaperonin GroEL SMc00913 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15966350 Common - N-ethylammeline chlorohydrolase SMc02421 141 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 15965858 Nonpathogen - hypothetical protein SMc01422 11 None None None 15965349 Common - hypothetical protein SMc01197 13 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15966875 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03272 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15966653 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03169 147 COG1309 AcrR, Transcriptional regulator Transcription 15966431 Common - hypothetical protein SMc00694 15 COG3668 ParE, Plasmid stabilization system protein General function prediction only 15965289 Common lppB LIPOPROTEIN PRECURSOR SMc02060 195 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 15963787 Common - PUTATIVE ATP-DEPENDENT NUCLEASE/HELICASE PROTEIN SMc02760 221 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 15965677 Common - hypothetical protein SMc04254 33 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15965279 Common - hypothetical protein SMc02070 133 COG1354 COG1354, Uncharacterized conserved protein Function unknown 15964847 Common nadA quinolinate synthetase SMc02601 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 15965731 Common ecnB PUTATIVE ENTERICIDIN B SIGNAL PEPTIDE PROTEIN SMc04332 4 None None None 15964707 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00096 17 None None None 15964377 Common - hypothetical protein SMc02318 98 COG2606 EbsC, Uncharacterized conserved protein Function unknown 15966137 Common - PUTATIVE AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE PROTEIN SMc02722 14 COG3231 Aph, Aminoglycoside phosphotransferase Translation, ribosomal structure and biogenesis 15964174 Common truA tRNA pseudouridine synthase A SMc01099 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 15964067 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein SMc00394 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 15966954 Common xthA3 PUTATIVE EXODEOXYRIBONUCLEASE III PROTEIN SMc03818 195 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 15964613 Common - PUTATIVE PUTRESCINE-BINDING PERIPLASMIC PROTEIN SMc00991 129 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 15964238 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02161 145 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965176 Common - hypothetical protein SMc01008 7 COG5502 COG5502, Uncharacterized conserved protein Function unknown 15963812 Common - hypothetical protein SMc02578 6 None None None 15964839 Nonpathogen - hypothetical protein SMc02637 3 None None None 15964967 Common - PUTATIVE AUXIN-BINDING PROTEIN SMc01776 20 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 15966573 Common - PUTATIVE DIPEPTIDE-BINDING ABC TRANSPORTER PROTEIN SMc04037 209 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966145 Nonpathogen - hypothetical protein SMc02730 3 None None None 15964414 Common fliE flagellar hook-basal body protein FliE SMc03029 24 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 15965175 Common - hypothetical protein SMc01007 179 COG0759 COG0759, Uncharacterized conserved protein Function unknown 15966719 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03127 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15964560 Common pmbA HYPOTHETICAL PMBA PROTEIN SMc00897 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 15966016 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01651 192 COG0583 LysR, Transcriptional regulator Transcription 15966344 Common - PUTATIVE PEPTIDE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc02415 195 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15963844 Nonpathogen - hypothetical protein SMc02614 2 None None None 15966151 Common tdk thymidine kinase SMc02736 97 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 15964438 Common fliQ flagellar biosynthesis protein FliQ SMc03053 116 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 15964170 Common rbsK PROBABLE RIBOKINASE PROTEIN SMc01103 130 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 15964212 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01707 4 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 15965411 Common - hypothetical protein SMc00233 82 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 15965659 Nonpathogen - PUTATIVE GLYCINE-RICH CELL WALL STRUCTURAL TRANSMEMBRANE PROTEIN SMc04236 1 None None None 15965951 Common - hypothetical protein SMc01844 97 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15965933 Common murF PROBABLE UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2, 6-DIAMINOPIMELATE--D-ALANYL-D-ALANYL LIGASE PROTEIN SMc01862 209 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 15963961 Common - hypothetical protein SMc02883 9 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 15965690 Common msbB lipid A biosynthesis lauroyl acyltransferase SMc04268 105 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 15965531 Common - HYPOTHETICAL/UNKNOWN SIGNAL PEPTIDE PROTEIN SMc00489 6 None None None 15964899 Common - hypothetical protein SMc00576 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 15966712 Common - hypothetical protein SMc03134 23 None None None 15965796 Common - hypothetical protein SMc04274 13 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 15966062 Common - hypothetical protein SMc01558 17 None None None 15965228 Common aapP PROBABLE GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02121 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 15964431 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03046 61 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15966008 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc01643 217 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965131 Common rpsM 30S ribosomal protein S13 SMc01287 246 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 15963846 Common - PUTATIVE PERMEASE TRANSMEMBRANE PROTEIN SMc02616 169 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15963935 Common dnaK molecular chaperone DnaK SMc02857 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 15965123 Common rpsH 30S ribosomal protein S8 SMc01295 247 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 15965599 Common nadE NAD synthetase SMc00161 238 COG0171 NadE, NAD synthase Coenzyme metabolism 15965225 Common - hypothetical protein SMc02123 54 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 15965628 Nonpathogen - hypothetical protein SMc00135 11 COG5530 COG5530, Predicted integral membrane protein Function unknown 15966894 Common TRm1b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc03296 72 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964272 Common hslO Hsp33-like chaperonin SMc02136 127 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 15964940 Common ppk polyphosphate kinase SMc00618 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 15963992 Common infB translation initiation factor IF-2 SMc02914 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 15966480 Common - hypothetical protein SMc00644 18 COG5373 COG5373, Predicted membrane protein Function unknown 15966847 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03746 1 None None None 15966076 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01572 68 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 15965159 Common - hypothetical protein SMc01258 27 COG3503 COG3503, Predicted membrane protein Function unknown 15966315 Common - PUTATIVE PENTOSE KINASE PROTEIN SMc02335 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15965909 Common - hypothetical protein SMc04453 15 None None None 15964823 Common acpS 4'-phosphopantetheinyl transferase SMc02654 159 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 15966357 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02429 139 COG0583 LysR, Transcriptional regulator Transcription 15964530 Common glcD PROBABLE GLYCOLATE OXIDASE SUBUNIT PROTEIN SMc00832 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15965332 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01212 228 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966235 Common livF PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc01948 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 15966257 Common - hypothetical protein SMc01970 29 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 15964371 Common - hypothetical protein SMc04432 29 COG3514 COG3514, Uncharacterized protein conserved in bacteria Function unknown 15966025 Nonpathogen - hypothetical protein SMc01660 1 None None None 15964663 Common - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc00014 24 COG5349 COG5349, Uncharacterized protein conserved in bacteria Function unknown 15965575 Common - PUTATIVE TRNA/RRNA METHYLTRANSFERASE PROTEIN SMc00184 161 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 15963968 Common - PUTATIVE OUTER MEMBRANE RECEPTOR PROTEIN SMc02890 118 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 15965364 Common - hypothetical protein SMc01182 49 None None None 15964879 Common radA DNA repair protein RadA SMc00556 221 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 15965499 Common - hypothetical protein SMc00521 29 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 15966918 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc03782 115 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 15966663 Common phaA1 putative monovalent cation/H+ antiporter subunit A SMc03179 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 15966482 Common - hypothetical protein SMc00642 174 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15966646 Common - hypothetical protein SMc03162 54 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15964906 Common - HYPOTHETICAL, TRANSMEMBRANE PROTEIN SMc00583 110 COG0795 COG0795, Predicted permeases General function prediction only 15966268 Common - PUTATIVE CYTOCHROME C TRANSMEMBRANE PROTEIN SMc01981 56 COG3474 COG3474, Cytochrome c2 Energy production and conversion 15964429 Common motD CHEMOTAXIS PROTEIN (MOTILITY PROTEIN D) SMc03044 4 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 15964509 Common ftsJ PROBABLE CELL DIVISION PROTEIN SMc00811 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 15966394 Common - hypothetical protein SMc00731 128 COG2096 COG2096, Uncharacterized conserved protein Function unknown 15964252 Common - hypothetical protein SMc02155 36 COG1483 COG1483, Predicted ATPase (AAA+ superfamily) General function prediction only 15964500 Common - hypothetical protein SMc00802 9 None None None 15965202 Common - hypothetical protein SMc01034 10 COG0456 RimI, Acetyltransferases General function prediction only 15965704 Common - PUTATIVE PEPTIDE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc04293 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15965672 Common - hypothetical protein SMc04249 126 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 15964323 Common - hypothetical protein SMc02266 3 None None None 15966973 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03837 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 15964032 Common - hypothetical protein SMc00359 23 COG1633 COG1633, Uncharacterized conserved protein Function unknown 15966794 Nonpathogen - hypothetical protein SMc02494 4 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15964621 Common - hypothetical protein SMc00984 233 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 15964274 Common - hypothetical protein SMc02134 31 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15965375 Common - hypothetical protein SMc01171 30 None None None 15966699 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03147 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 15965954 Common - putative ABC transporter ATP-binding protein SMc04454 248 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 15964849 Common nadC PROBABLE NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE CARBOXYLATING PROTEIN SMc02598 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 15964482 Common - PUTATIVE IRON BINDING PROTEIN SMc00784 123 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 161621430 Common leuA1 2-isopropylmalate synthase SMc02717 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 15964138 Common - PUTATIVE PROTEASE IV TRANSMEMBRANE PROTEIN SMc01135 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15964131 Common grpE PROBABLE HEAT SHOCK PROTEIN SMc01142 222 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 15965147 Common adhC1 PROBABLE ALCOHOL DEHYDROGENASE CLASS III + GLUTATHIONE-DEPENDENT FORMALDEHYDE DEHYDROGENASE PROTEIN SMc01270 207 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 15964551 Common - hypothetical protein SMc00907 7 None None None 15966317 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02452 112 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15965043 Common - hypothetical protein SMc01374 43 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15964631 Common - PUTATIVE RNA METHYLTRANSFERASE PROTEIN SMc00974 195 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 15964236 Common pgi glucose-6-phosphate isomerase SMc02163 197 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 15966410 Common - hypothetical protein SMc00715 31 COG1434 COG1434, Uncharacterized conserved protein Function unknown 15966852 Common - PUTATIVE INTEGRASE DNA PROTEIN SMc03246 101 COG0582 XerC, Integrase DNA replication, recombination, and repair 15966112 Common - hypothetical protein SMc02697 47 COG2030 MaoC, Acyl dehydratase Lipid metabolism 15966448 Common - hypothetical protein SMc00677 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 15963950 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02872 176 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15964647 Common - hypothetical protein SMc00001 53 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 15966415 Common hisC1 histidinol-phosphate aminotransferase SMc00710 239 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 15965916 Common - hypothetical protein SMc01879 41 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 15965547 Nonpathogen - hypothetical protein SMc00549 4 COG4282 SMI1, Protein involved in beta-1,3-glucan synthesis Carbohydrate transport and metabolism 15965490 Common - hypothetical protein SMc00528 87 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 15965391 Common - hypothetical protein SMc00946 219 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 15966677 Common cobG PROBABLE COBALAMIN BIOSYNTHESIS PROTEIN SMc03193 38 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 15966108 Common pth peptidyl-tRNA hydrolase SMc02693 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 15966288 Nonpathogen - hypothetical protein SMc02023 2 None None None 15964798 Nonpathogen - HYPOTHETICAL UNKNOWN TRANSMEMBRANE PROTEIN SMc02389 1 None None None 15966377 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc02449 39 COG0456 RimI, Acetyltransferases General function prediction only 161621436 Common recO DNA repair protein RecO SMc02635 58 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 15965961 Common - hypothetical protein SMc01575 88 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15964884 Common dnaB replicative DNA helicase SMc00561 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 15964745 Common phaA2 putative monovalent cation/H+ antiporter subunit A SMc00051 209 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 15965649 Common - HYPOTHETICAL LIPOPROTEIN TRANSMEMBRANE SMc04226 5 None None None 15966727 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03119 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 15966503 Common ruvA Holliday junction DNA helicase motor protein SMc03966 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 15964870 Common - hypothetical protein SMc02545 95 COG2962 RarD, Predicted permeases General function prediction only 15965065 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A SMc01352 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 15964310 Common pchB PUTATIVE SALICYLATE BIOSYNTHESIS PROTEIN SMc02253 38 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 15965577 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00182 98 COG0789 SoxR, Predicted transcriptional regulators Transcription 15963941 Common recF recombination protein F SMc02863 165 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 15964224 Common cyaD1 PUTATIVE ADENYLATE CYCLASE TRANSMEMBRANE PROTEIN SMc02176 82 COG4252 COG4252, Predicted transmembrane sensor domain Signal transduction mechanisms 15965565 Common - hypothetical protein SMc00194 7 COG5661 COG5661, Predicted secreted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 15965877 Common hflK PUTATIVE MEMBRANE BOUND PROTEASE PROTEIN SMc01441 166 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 15964321 Nonpathogen - hypothetical protein SMc02264 1 None None None 15966946 Common - hypothetical protein SMc03810 35 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15964156 Common rimI PUTATIVE ACETYLTRANSFERASE PROTEIN SMc01117 165 COG0456 RimI, Acetyltransferases General function prediction only 15964583 Common - PUTATIVE MRP PROTEIN HOMOLOG ATP-BINDING SMc00876 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 15966670 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03186 181 COG0583 LysR, Transcriptional regulator Transcription 15966883 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc03284 2 None None None 15965287 Common pcm protein-L-isoaspartate O-methyltransferase SMc02062 156 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 15965457 Common - hypothetical protein SMc00276 199 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 15965032 Common nuoN NADH dehydrogenase subunit N SMc01927 209 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 15964680 Common - hypothetical protein SMc00081 47 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 15966911 Common - hypothetical protein SMc03774 88 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15967076 Common - hypothetical protein SMc04089 44 COG5360 COG5360, Uncharacterized protein conserved in bacteria Function unknown 15965897 Common uvrD1 PROBABLE DNA HELICASE II PROTEIN SMc01461 229 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 15963914 Common dapB dihydrodipicolinate reductase SMc02837 209 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 15964864 Common cysS cysteinyl-tRNA synthetase SMc02551 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15964373 Common - hypothetical protein SMc02314 11 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 15967027 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc03891 189 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15966866 Common TRm17 PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ISRM17 SMc03260 14 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 15964514 Common - hypothetical protein SMc00816 16 COG5331 COG5331, Uncharacterized protein conserved in bacteria Function unknown 15965904 Common cheW2 PROBABLE CHEMOTAXIS PROTEIN SMc01468 139 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 15966873 Common - PUTATIVE PEPTIDE-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc03269 185 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966863 Common TRm18 PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ISRM18 SMc03257 15 None None None 15966539 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit SMc04002 192 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 15963756 Common aroE shikimate 5-dehydrogenase SMc02791 225 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 15964809 Common - PROBABLE OUTER MEMBRANE PROTEIN SMc02400 13 None None None 15966529 Common - hypothetical protein SMc03992 144 COG1360 MotB, Flagellar motor protein Cell motility and secretion 15966342 Common - PUTATIVE AMINOTRANSFERASE PROTEIN SMc02413 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 15964260 Common - hypothetical protein SMc02148 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 15964195 Common - hypothetical protein SMc01723 24 COG4803 COG4803, Predicted membrane protein Function unknown 15966933 Common metA homoserine O-succinyltransferase SMc03797 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 15963976 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase SMc02898 137 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 15965821 Common ilvC ketol-acid reductoisomerase SMc04346 211 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 15965210 Common - PUTATIVE NIFR3-LIKE PROTEIN SMc01041 214 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 15966611 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc03936 11 None None None 15964692 Common - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc00088 3 None None None 15965076 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc01341 1 None None None 15965046 Common celR1 PUTATIVE 2-COMPONENT RECEIVER DOMAIN PROTEIN SMc01371 224 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 15965254 Common - hypothetical protein SMc02095 208 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 15966565 Common - PUTATIVE LOW SPECIFICITY L-THREONINE ALDOLASE PROTEIN SMc04029 87 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 15965964 Common - PUTATIVE ALCOHOL DEHYDROGENASE PROTEIN SMc01582 172 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 15966760 Common fdsD PUTATIVE NAD-DEPENDENT FORMATE DEHYDROGENASE DELTA SUBUNIT PROTEIN SMc03086 26 None None None 15963880 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04125 121 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 15964019 Common - hypothetical protein SMc00346 23 COG2259 COG2259, Predicted membrane protein Function unknown 15966456 Common hutH2 PUTATIVE HISTIDINE AMMONIA-LYASE PROTEIN SMc00669 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 15965540 Common rpsD 30S ribosomal protein S4 SMc00485 221 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 15967020 Common ispA PROBABLE GERANYLTRANSTRANSFERASE PROTEIN SMc03884 239 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 15964363 Common - hypothetical protein SMc02306 21 None None None 15966938 Common - hypothetical protein SMc03802 39 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 15966363 Common hemK1 PUTATIVE METHYLTRANSFERASE PROTEIN SMc02435 229 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 15966460 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00665 2 None None None 15965660 Nonpathogen - hypothetical protein SMc04237 1 None None None 15965487 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc00531 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 15963901 Common - hypothetical protein SMc02824 24 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 15967054 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc04396 66 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15964059 Common - hypothetical protein SMc00386 113 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 15965864 Common cspA2 PROBABLE COLD SHOCK TRANSCRIPTION REGULATOR PROTEIN SMc01428 177 COG1278 CspC, Cold shock proteins Transcription 15966314 Common - PUTATIVE PENTOSE KINASE TRANSMEMBRANE PROTEIN SMc02334 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15966242 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01955 234 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 15963850 Common - hypothetical protein SMc02620 72 COG1396 HipB, Predicted transcriptional regulators Transcription 15966408 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc00717 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 15966901 Common - PUTATIVE CYTOSINE-SPECIFIC METHYLTRANSFERASE PROTEIN SMc03763 115 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 15966249 Common - hypothetical protein SMc01962 208 COG0388 COG0388, Predicted amidohydrolase General function prediction only 15965763 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04181 3 None None None 15965495 Common - hypothetical protein SMc00523 46 COG2833 COG2833, Uncharacterized protein conserved in bacteria Function unknown 15966557 Common - hypothetical protein SMc04020 218 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 15966746 Nonpathogen - hypothetical protein SMc03100 1 None None None 15966333 Common - hypothetical protein SMc02353 76 COG1737 RpiR, Transcriptional regulators Transcription 15963810 Common - HYPOTHETICAL ACETYLTRANSFERASE PROTEIN SMc02576 23 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15966928 Common - hypothetical protein SMc03792 24 COG5515 COG5515, Uncharacterized conserved small protein Function unknown 15965134 Common rplQ 50S ribosomal protein L17 SMc01283 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 15964280 Common - hypothetical protein SMc02222 9 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 15965217 Common hfq RNA-binding protein Hfq SMc01048 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 15965346 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02814 73 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 15964524 Common - hypothetical protein SMc00826 174 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 15965182 Nonpathogen - hypothetical protein SMc01014 1 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 15964994 Common speB PROBABLE AGMATINASE PROTEIN SMc01802 133 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 15963895 Common - hypothetical protein SMc04110 14 COG5461 COG5461, Type IV pili component Cell motility and secretion 15963831 Common - hypothetical protein SMc04463 36 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 15965982 Common - hypothetical protein SMc01617 65 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 15964636 Common - hypothetical protein SMc00969 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 15965775 Common TRm3 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM3 SMc04195 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965978 Common rpiB ribose-5-phosphate isomerase B SMc01613 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 15966121 Common - hypothetical protein SMc02706 33 COG5426 COG5426, Uncharacterized membrane protein Function unknown 15965489 Common nifS PUTATIVE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE PROTEIN SMc00529 237 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 15966550 Common pabB para-aminobenzoate synthase component I SMc04013 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 15965506 Common - PUTATIVE MONOOXYGENASE PROTEIN SMc00514 92 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 15965093 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc01325 3 None None None 15965854 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01418 37 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 15964850 Common sodC PUTATIVE SUPEROXIDE DISMUTASE CU-ZN PRECURSOR (BACTERIOCUPREIN) TRANSMEMBRANE PROTEIN SMc02597 87 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 15965945 Common - hypothetical protein SMc01850 34 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 15966841 Nonpathogen - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc03240 4 None None None 15966500 Common sqdC SULFOLIPID BIOSYNTHESIS PROTEIN SMc03963 171 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 15966231 Common - PUTATIVE HALOPEROXIDASE PROTEIN SMc01944 170 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15967068 Nonpathogen - hypothetical protein SMc04409 1 None None None 15963819 Common actS SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc02585 209 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15965806 Common - hypothetical protein SMc04299 92 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 15965511 Common - hypothetical protein SMc00509 4 None None None 15963824 Common - hypothetical protein SMc02590 6 None None None 15964458 Common ordL2 PUTATIVE OXIDOREDUCTASE PROTEIN SMc00761 124 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15964796 Common - hypothetical protein SMc02387 78 COG1742 COG1742, Uncharacterized conserved protein Function unknown 15964752 Common mucR TRANSCRIPTION REGULATOR PROTEIN SMc00058 34 COG4957 COG4957, Predicted transcriptional regulator Transcription 15966826 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc03225 2 None None None 15966140 Common trpE ANTHRANILATE SYNTHASE INCLUDES: GLUTAMINE AMIDOTRANSFERASE PROTEIN SMc02725 239 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 15964303 Common - hypothetical protein SMc02246 35 COG3502 COG3502, Uncharacterized protein conserved in bacteria Function unknown 15965807 Common afuC PROBABLE FERRIC IRON TRANSPORT ATP-BINDING PROTEIN SMc04300 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966530 Common - hypothetical protein SMc03993 28 None None None 15964000 Common fabB 3-oxoacyl-(acyl carrier protein) synthase I SMc00327 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15965023 Common nuoF1 NADH DEHYDROGENASE I CHAIN F TRANSMEMBRANE PROTEIN SMc01918 167 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 15965715 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04308 115 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15964905 Common - hypothetical protein SMc00582 115 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 15966778 Common fur PROBABLE FERRIC UPTAKE REGULATION PROTEIN SMc02510 187 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 15965208 Common - hypothetical protein SMc01039 190 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 15965307 Common gst5 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc01238 96 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15965294 Common crtB PUTATIVE PHYTOENE SYNTHASE PROTEIN SMc02055 44 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 15965586 Common - hypothetical protein SMc00174 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 15964168 Common - PUTATIVE NUCLEOSIDE HYDROLASE PROTEIN SMc01105 89 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 15965350 Nonpathogen - hypothetical protein SMc01196 3 None None None 15966090 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01593 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15965480 Common map1 methionine aminopeptidase SMc00298 243 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 15964141 Common - hypothetical protein SMc01132 38 COG3427 COG3427, Uncharacterized conserved protein Function unknown 15965388 Common wrbA1 TrpR binding protein WrbA SMc00943 118 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 15965260 Common lpxB lipid-A-disaccharide synthase SMc02089 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 15965924 Common ddl D-alanine--D-alanine ligase SMc01871 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 15965997 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc01632 127 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 15965884 Common - hypothetical protein SMc01448 15 COG5502 COG5502, Uncharacterized conserved protein Function unknown 15966496 Common - hypothetical protein SMc03959 112 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 15965769 Common - PROBABLE DNA PACKAGING PROTEIN GP2 SMc04187 7 COG5565 COG5565, Bacteriophage terminase large (ATPase) subunit and inactivated derivatives General function prediction only 15966518 Common pgk phosphoglycerate kinase SMc03981 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 15965039 Common proS prolyl-tRNA synthetase SMc01934 249 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15966039 Nonpathogen - hypothetical protein SMc01542 2 None None None 15964448 Common aglE ALPHA-GLUCOSIDES-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc03061 38 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15964858 Common - hypothetical protein SMc02557 7 None None None 15965461 Nonpathogen - hypothetical protein SMc00280 1 None None None 15964523 Common gsh1 PUTATIVE GLUTAMATE--CYSTEINE LIGASE PRECURSOR PROTEIN SMc00825 53 COG3572 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 15965682 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER SIGNAL PEPTIDE PROTEIN SMc04259 68 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15964292 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02235 24 COG1522 Lrp, Transcriptional regulators Transcription 15963838 Common soxB SARCOSINE OXIDASE BETA SUBUNIT PROTEIN SMc02608 130 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15966540 Common rpmJ 50S ribosomal protein L36 SMc04003 71 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 15965989 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc01624 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15966032 Common - hypothetical protein SMc01667 34 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 15965810 Common csp1 COLD SHOCK TRANSCRIPTION REGULATOR PROTEIN SMc04318 176 COG1278 CspC, Cold shock proteins Transcription 15965838 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01406 142 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 15965833 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01403 143 COG1522 Lrp, Transcriptional regulators Transcription 15965302 Common gcvT PROBABLE AMINOMETHYLTRANSFERASE (GLYCINE CLEAVAGE SYSTEM T PROTEIN) SMc02047 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15965231 Common aapJ PROBABLE GENERAL L-AMINO ACID-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc02118 125 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15964464 Common - hypothetical protein SMc00767 6 None None None 15964460 Common - hypothetical protein SMc00763 141 COG2081 COG2081, Predicted flavoproteins General function prediction only 15965719 Common - PUTATIVE GLYCINE BETAINE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc04439 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 15964936 Common purN phosphoribosylglycinamide formyltransferase SMc00614 220 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 15964087 Common - hypothetical protein SMc00414 41 COG3963 COG3963, Phospholipid N-methyltransferase Lipid metabolism 15966522 Common cyaF2 PROBABLE ADENYLATE/GUANYLATE CYCLASE PROTEIN SMc03985 92 COG5616 COG5616, Predicted integral membrane protein Function unknown 15966263 Common - hypothetical protein SMc01976 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 15966782 Common sitD PUTATIVE IRON TRANSPORT SYSTEM MEMBRANE ABC TRANSPORTER PROTEIN SMc02506 188 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15967013 Common - hypothetical protein SMc03877 64 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 15967039 Common ndvB BETA-(1,2)-GLUCAN PRODUCTION ASSOCIATED TRANSMEMBRANE PROTEIN SMc04382 47 COG3459 COG3459, Cellobiose phosphorylase Carbohydrate transport and metabolism 15966634 Common - hypothetical protein SMc02989 3 None None None 15964467 Common potF PROBABLE PUTRESCINE-BINDING PERIPLASMIC PROTEIN SMc00770 133 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 15964433 Common flgK flagellar hook-associated protein FlgK SMc03048 69 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 15965932 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase SMc01863 219 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 15966050 Common - hypothetical protein SMc01548 4 None None None 15965162 Common - hypothetical protein SMc00995 31 COG5458 COG5458, Uncharacterized conserved protein Function unknown 15964605 Nonpathogen - HYPOTHETICAL/UNKNOWN SIGNAL PEPTIDE PROTEIN SMc00854 1 None None None 15965642 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc04219 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 15965597 Common - HYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN SMc00163 34 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15964094 Common - PUTATIVE AMINO ACID EFFLUX PROTEIN SMc00422 118 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15965793 Common - hypothetical protein SMc04269 41 COG1598 COG1598, Uncharacterized conserved protein Function unknown 15965433 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00253 5 COG5283 COG5283, Phage-related tail protein Function unknown 15966060 Common - hypothetical protein SMc01556 100 COG2968 COG2968, Uncharacterized conserved protein Function unknown 15966582 Common - hypothetical protein SMc04046 52 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15966692 Common hmgA homogentisate 1,2-dioxygenase SMc03208 52 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 15965482 Common - soluble pyridine nucleotide transhydrogenase SMc00300 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15964785 Common - PUTATIVE HEAT SHOCK PROTEIN SMc02376 233 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 15966070 Common recQ PROBABLE ATP-DEPENDENT DNA HELICASE PROTEIN SMc01566 202 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 15965539 Common glsA glutaminase SMc00486 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 15966814 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc02474 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 15965414 Common trpC indole-3-glycerol-phosphate synthase SMc00236 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 15963930 Common - hypothetical protein SMc02852 160 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 15963980 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02902 88 COG2378 COG2378, Predicted transcriptional regulator Transcription 15966508 Common mexF2 PROBABLE MULTIDRUG-EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc03971 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 15966455 Common hisV HISTIDINE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc00670 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 15964664 Common - PUTATIVE CYTOCHROME OXIDASE COMPLEX BIOGENESIS FACTOR TRANSMEMBRANE PROTEIN SMc00085 54 COG3346 COG3346, Uncharacterized conserved protein Function unknown 15964432 Common flgE flagellar hook protein FlgE SMc03047 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 15965654 Common uvrB excinuclease ABC subunit B SMc04231 227 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 15964408 Common - hypothetical protein SMc03023 20 None None None 15964542 Common gst11 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc00916 99 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15964325 Common kpsF3 PUTATIVE CAPSULE EXPRESSION PROTEIN SMc02268 166 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 15966579 Common - hypothetical protein SMc04043 59 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 15966064 Common - hypothetical protein SMc01560 39 COG5507 COG5507, Uncharacterized conserved protein Function unknown 15963987 Common - PUTATIVE TRANSGLYCOSYLASE TRANSMEMBRANE PROTEIN SMc02909 105 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 15964114 Common - hypothetical protein SMc01158 101 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 15964776 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc02367 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15966254 Common speB2 PUTATIVE AGMATINASE PROTEIN SMc01967 159 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 15965207 Common - hypothetical protein SMc01038 102 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 15965631 Common - hypothetical protein SMc00132 13 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 15965284 Common tatC PUTATIVE SEC-INDEPENDENT TRANSLOCASE TRANSMEMBRANE PROTEIN SMc02065 204 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 15963780 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase SMc02767 192 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 15965532 Common purL phosphoribosylformylglycinamidine synthase II SMc00488 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 15964892 Common - hypothetical protein SMc00569 26 None None None 15963925 Common - hypothetical protein SMc02847 13 COG0645 COG0645, Predicted kinase General function prediction only 15964441 Common - hypothetical protein SMc03056 3 None None None 15966213 Common - hypothetical protein SMc01827 99 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 15964792 Common - hypothetical protein SMc02383 9 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 15966665 Common phaD1 putative monovalent cation/H+ antiporter subunit D SMc03181 209 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 15966986 Nonpathogen ccmD PUTATIVE HEME EXPORTER D (CYTOCHROME C-TYPE BIOGENESIS PROTEIN) TRANSMEMBRANE SMc03850 1 None None None 15965197 Common - hypothetical protein SMc01029 23 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 15964536 Common - PUTATIVE TRANSPORTER TRANSMEMBRANE PROTEIN SMc00922 59 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 15966483 Common serA PUTATIVE D-3-PHOSPHOGLYCERATE DEHYDROGENASE PROTEIN SMc00641 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 15965622 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00198 1 None None None 15966294 Common - PUTATIVE DIPEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02029 216 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965151 Common - hypothetical protein SMc01266 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 15966648 Common xylB PUTATIVE XYLULOSE KINASE PROTEIN SMc03164 177 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15963849 Nonpathogen - hypothetical protein SMc02619 3 None None None 15966942 Common glnK PROBABLE NITROGEN REGULATORY PROTEIN PII 2 SMc03806 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 15966846 Common - amidase SMc03245 219 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 15965442 Common - acyl-CoA synthetase SMc00261 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15966006 Common - carnitinyl-CoA dehydratase SMc01641 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 15965996 Common - PROBABLE ATP-BINDING ABC TRANSPORTER PROTEIN SMc01631 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 15964499 Nonpathogen - hypothetical protein SMc00801 9 None None None 15966899 Common - hypothetical protein SMc03761 49 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 15963949 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02871 173 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 15965460 Common - hypothetical protein SMc00279 9 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 15966161 Common TRm5 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc01530 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966827 Common - hypothetical protein SMc03226 53 COG3897 COG3897, Predicted methyltransferase General function prediction only 15964837 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02639 39 COG0640 ArsR, Predicted transcriptional regulators Transcription 15965687 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04264 34 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15964966 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc01775 45 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15965194 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc01026 18 None None None 15965422 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc00243 107 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 15964908 Common pepA leucyl aminopeptidase SMc00585 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 15964719 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00101 199 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 15966678 Common cobF precorrin 6A synthase SMc03194 40 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 15965476 Common - aminotransferase SMc00294 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15963816 Common - hypothetical protein SMc02582 70 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15966150 Common - hypothetical protein SMc02735 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15964845 Common - hypothetical protein SMc02631 48 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 15966704 Common - hypothetical protein SMc03142 5 None None None 15964885 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00562 141 COG1846 MarR, Transcriptional regulators Transcription 15966686 Common bkdAb PROBABLE 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT PROTEIN SMc03202 218 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 15964379 Common - hypothetical protein SMc02320 12 COG2261 COG2261, Predicted membrane protein Function unknown 15965558 Common - hypothetical protein SMc00468 53 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 15964737 Common - hypothetical protein SMc00454 35 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 15965190 Common - PUTATIVE CYTOCHROME B TRANSMEMBRANE PROTEIN SMc01022 70 COG3038 CybB, Cytochrome B561 Energy production and conversion 15965639 Common - hypothetical protein SMc04216 26 COG3313 COG3313, Predicted Fe-S protein General function prediction only 15966624 Common - hypothetical protein SMc02979 47 COG2319 COG2319, FOG: WD40 repeat General function prediction only 15965126 Common rpsE 30S ribosomal protein S5 SMc01292 248 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 15966874 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03754 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965330 Common - PUTATIVE ZINC-CONTAINING ALCOHOL DEHYDROGENASE PROTEIN SMc01214 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 15964216 Common - hypothetical protein SMc01703 28 COG5579 COG5579, Uncharacterized conserved protein Function unknown 15964254 Common - hypothetical protein SMc04429 9 None None None 15963966 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02888 122 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15965847 Common - hypothetical protein SMc01413 25 COG1944 COG1944, Uncharacterized conserved protein Function unknown 15966312 Common - hypothetical protein SMc02460 99 COG1737 RpiR, Transcriptional regulators Transcription 15966153 Common opuB PUTATIVE GLYCINE BETAINE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02738 211 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 15963811 Common hslU ATP-dependent protease ATP-binding subunit SMc02577 209 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 15966607 Common soxD2 PUTATIVE SARCOSINE OXIDASE DELTA SUBUNIT PROTEIN SMc03932 31 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 15966881 Common TRm27.1 PUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM27 SMc03282 24 None None None 15966979 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03843 118 COG0640 ArsR, Predicted transcriptional regulators Transcription 15967045 Common - PUTATIVE ALDEHYDE DEHYDROGENASE PROTEIN SMc04387 100 COG1396 HipB, Predicted transcriptional regulators Transcription 15965382 Common trkH PROBABLE TRK SYSTEM POTASSIUM UPTAKE TRANSMEMBRANE PROTEIN SMc00937 121 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 15963864 Common gst9 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc04141 22 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15964764 Common - hypothetical protein SMc00064 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 15964830 Common - HYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN SMc02647 68 COG0640 ArsR, Predicted transcriptional regulators Transcription 15966759 Common mcpY PROBABLE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS PROTEIN) SMc03087 159 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15964933 Common - hypothetical protein SMc00611 78 COG2898 COG2898, Uncharacterized conserved protein Function unknown 15967062 Common - PUTATIVE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN SMc04404 13 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15963995 Common - hypothetical protein SMc00322 52 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 15966237 Common livM PROBABLE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT PERMEASE ABC TRANSPORTER PROTEIN SMc01950 151 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 15964473 Common fbpB PUTATIVE IRON(III) PERMEASE PROTEIN SMc00775 187 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 15966768 Common glpD glycerol-3-phosphate dehydrogenase SMc02520 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 15964950 Common - hypothetical protein SMc01759 6 None None None 15966562 Common - hypothetical protein SMc04025 28 COG2845 COG2845, Uncharacterized protein conserved in bacteria Function unknown 15964362 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase SMc02305 212 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 15965098 Common rplA 50S ribosomal protein L1 SMc01320 243 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 15964982 Common - PUTATIVE GLYCOSYLTRANSFERASE PROTEIN SMc01790 212 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 15965747 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04165 170 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15965025 Common nuoG1 NADH dehydrogenase subunit G SMc01920 191 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 15964535 Common tag PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE I PROTEIN SMc00923 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 15964926 Common ropB1 PROBABLE OUTER MEMBRANE PROTEIN SMc00604 14 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 15965573 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING TRANSMEMBRANE PROTEIN SMc00186 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15965438 Common ropB2 PROBABLE OUTER-MEMBRANE PROTEIN SMc00257 29 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 15963792 Common ahcY S-adenosyl-L-homocysteine hydrolase SMc02755 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 15964356 Common TRm30.4 PUTATIVE TRANSPOSASE NUMBER 4 FOR INSERTION SEQUENCE ISRM30 SMc02300 46 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 15966170 Common ntrP NITROGEN REGULATORY PROTEIN SMc03949 16 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 15965074 Common aroQ 3-dehydroquinate dehydratase SMc01343 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 15966660 Common - hypothetical protein SMc03176 89 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 15965431 Common - hypothetical protein SMc00251 6 None None None 15966630 Common - hypothetical protein SMc02985 28 COG3683 COG3683, ABC-type uncharacterized transport system, periplasmic component General function prediction only 15966999 Common rplS 50S ribosomal protein L19 SMc03863 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 15964971 Common hppA membrane-bound proton-translocating pyrophosphatase SMc01780 98 COG3808 OVP1, Inorganic pyrophosphatase Energy production and conversion 15964103 Common - hypothetical protein SMc00431 60 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15965269 Common valS valyl-tRNA synthetase SMc02080 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15964767 Common feuP PROBABLE TRANSCRIPTION REGULATOR PROTEIN SMc00458 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15966833 Common hemD uroporphyrinogen-III synthase SMc03232 22 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 15965298 Common - hypothetical protein SMc02051 7 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 15965261 Common - hypothetical protein SMc02088 36 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 15964269 Common - hypothetical protein SMc02139 33 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 15965756 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04174 6 None None None 15964800 Common - hypothetical protein SMc02391 10 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 15966757 Common TRm11b TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc03089 48 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964567 Common TRm11a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc00891 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965782 Common - PUTATIVE SIGNAL PEPTIDE PROTEIN SMc04201 89 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 15964976 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III SMc01785 208 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 15964041 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00368 185 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15965927 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase SMc01868 135 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 15964279 Common - hypothetical protein SMc02221 15 None None None 15964502 Common - hypothetical protein SMc00804 16 None None None 15966134 Common TRm22 PUTATIVE TRANSPOSASE PROTEIN SMc02719 21 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 15965974 Common ribH riboflavin synthase subunit beta SMc01609 181 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 15964075 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00402 35 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 15964392 Common cheA CHEMOTAXIS PROTEIN (SENSORY TRANSDUCTION HISTIDINE KINASE) SMc03007 164 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 15965567 Common fdx PROBABLE FERREDOXIN, 2FE-2S FDII ELECTRON TRANSPORT IRON-SULFUR PROTEIN SMc00192 59 COG0633 Fdx, Ferredoxin Energy production and conversion 15965238 Nonpathogen - hypothetical protein SMc02111 14 COG5490 COG5490, Uncharacterized conserved protein Function unknown 15966414 Common tyrC cyclohexadienyl dehydrogenase SMc00711 158 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 15966183 Common hmuU PUTATIVE HEMIN TRANSPORT SYSTEM PERMEASE TRANSMEMBRANE PROTEIN SMc01511 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 15966043 Common - hypothetical protein SMc01546 3 None None None 15965319 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01225 189 COG0583 LysR, Transcriptional regulator Transcription 15964051 Common xseA exodeoxyribonuclease VII large subunit SMc00378 204 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 15964860 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02555 16 COG5451 COG5451, Predicted secreted protein Function unknown 15966087 Common - hypothetical protein SMc01590 13 COG4991 COG4991, Uncharacterized protein with a bacterial SH3 domain homologue Function unknown 15966426 Common - hypothetical protein SMc00699 36 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 15965084 Common prfB peptide chain release factor 2 SMc01333 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 15963789 Common - PUTATIVE NUCLEOTIDYL TRANSFERASE PROTEIN SMc02758 195 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 15964869 Common leuA2 putative alpha-isopropylmalate/homocitrate synthase family transferase SMc02546 214 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 15963886 Common deoB phosphopentomutase SMc04119 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 15966223 Common ureC urease subunit alpha SMc01837 97 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 15964129 Common rph ribonuclease PH SMc01144 184 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 15963879 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04126 114 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 15965739 Common - methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase SMc04342 161 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 15965894 Common - PUTATIVE TRANSPORT PROTEIN SMc01458 171 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 15965900 Common - hypothetical protein SMc01464 166 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 15964013 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00340 226 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 15964597 Common ipk PUTATIVE ISOPENTENYL MONOPHOSPHATE KINASE PROTEIN SMc00862 177 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 15966023 Common - PUTATIVE TRANSPORT PROTEIN SMc01658 18 COG4114 FhuF, Uncharacterized Fe-S protein General function prediction only 15963761 Common - PUTATIVE TRANSLOCASE TRANSMEMBRANE PROTEIN SMc02786 44 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 15965955 Common - PUTATIVE RIBONUCLEASE PROTEIN SMc02819 30 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 15963768 Common TRm19 PUTATIVE TRANSPOSASE FOR INSERTION SEQUENCE ISRM19 SMc02779 60 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964826 Common era GTP-binding protein Era SMc02651 232 COG1159 Era, GTPase General function prediction only 15966575 Common TRm17C PUTATIVE PARTIAL TRANSPOSASE FOR ISRM17 PROTEIN SMc04039 11 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 15964615 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00994 75 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15966819 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02469 138 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15965144 Common - PUTATIVE S-FORMYLGLUTATHIONE HYDROLASE PROTEIN SMc01273 94 COG0627 COG0627, Predicted esterase General function prediction only 15964330 Common rkpA FATTY ACID SYNTHASE TRANSMEMBRANE PROTEIN SMc02273 225 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 15964962 Common - hypothetical protein SMc01771 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 15964210 Nonpathogen - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01709 9 COG4719 COG4719, Uncharacterized protein conserved in bacteria Function unknown 15966797 Common - hypothetical protein SMc02491 47 COG4637 COG4637, Predicted ATPase General function prediction only 15966375 Common - hypothetical protein SMc02447 5 None None None 15966274 Common - PUTATIVE DEHYDROGENASE PROTEIN SMc01987 167 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 15966278 Common - short chain dehydrogenase SMc01991 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15963899 Common - hypothetical protein SMc02822 69 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 15965116 Common rplP 50S ribosomal protein L16 SMc01302 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 15966330 Common - hypothetical protein SMc02350 66 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 15966306 Common - short chain dehydrogenase SMc02041 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966096 Common lgt prolipoprotein diacylglyceryl transferase SMc02681 206 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 15964654 Common aroC chorismate synthase SMc00007 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 15966179 Nonpathogen - hypothetical protein SMc01514 7 None None None 15966227 Common - hypothetical protein SMc01940 24 COG3813 COG3813, Uncharacterized protein conserved in bacteria Function unknown 15966203 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01817 128 COG0583 LysR, Transcriptional regulator Transcription 15966031 Common mdeA methionine gamma-lyase SMc01666 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 15965885 Common - hypothetical protein SMc01449 12 None None None 15963794 Common - PUTATIVE IIA COMPONENT OF PTS SYSTEM PROTEIN SMc02753 100 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 15963916 Common TRm5C PARTIAL TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM5 SMc02937 36 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15966972 Common tesA PUTATIVE ACYL-COA THIOESTERASE I PROTEIN SMc03836 107 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 15965137 Common degP3 PROBABLE PROTEASE PROTEIN SMc01280 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 15965167 Common - hypothetical protein SMc00999 12 None None None 15966788 Common atpG F0F1 ATP synthase subunit gamma SMc02500 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 15966871 Common - PUTATIVE DIPEPTIDASE PROTEIN SMc03267 97 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 15965922 Common ftsA CELL DIVISION PROTEIN SMc01873 186 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 15964586 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00928 47 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 15963958 Common - hypothetical protein SMc02880 52 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 15965030 Common nuoL NADH dehydrogenase subunit L SMc01925 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 15966997 Common trmD tRNA (guanine-N(1)-)-methyltransferase SMc03861 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 15965605 Common - hypothetical protein SMc00156 69 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15964092 Common - hypothetical protein SMc00420 191 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 15965902 Common TRm21 PUTATIVE TRANSPOSASE PROTEIN SMc01466 33 COG5433 COG5433, Transposase DNA replication, recombination, and repair 15967025 Common - PUTATIVE TRANSPORT PROTEIN SMc03889 72 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 15967056 Common - PUTATIVE ENOYL-COA HYDRATASE PROTEIN SMc04398 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 15964048 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00375 169 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15966261 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01974 108 COG1802 GntR, Transcriptional regulators Transcription 15966776 Common - PUTATIVE PERMEASE TRANSMEMBRANE PROTEIN SMc02512 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 15966595 Common - hypothetical protein SMc04059 8 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 15966960 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03824 85 COG1846 MarR, Transcriptional regulators Transcription 15965760 Common - hypothetical protein SMc04178 63 COG3803 COG3803, Uncharacterized protein conserved in bacteria Function unknown 15965484 Common - hypothetical protein SMc00302 137 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 15964678 Common - hypothetical protein SMc00080 48 COG0640 ArsR, Predicted transcriptional regulators Transcription 15965321 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01223 165 COG1522 Lrp, Transcriptional regulators Transcription 15964383 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02324 93 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15966442 Common - PUTATIVE PENICILLIN-BINDING PROTEIN SMc00683 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 15964015 Common - hypothetical protein SMc00342 107 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 15963884 Common upp uracil phosphoribosyltransferase SMc04121 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 15965581 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00179 2 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 15964810 Common - hypothetical protein SMc02401 7 None None None 15965451 Common - PUTATIVE TRANSKETOLASE ALPHA SUBUNIT PROTEIN SMc00270 219 COG3959 COG3959, Transketolase, N-terminal subunit Carbohydrate transport and metabolism 15966337 Common - PUTATIVE HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc02357 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 15966520 Common fbaB PROBABLE FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I PROTEIN SMc03983 34 COG3588 COG3588, Fructose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 15964314 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02257 167 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 15964120 Common rpsT 30S ribosomal protein S20 SMc01152 157 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 15965618 Common - hypothetical protein SMc00197 97 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15965352 Common - hypothetical protein SMc01194 74 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 15964466 Common - hypothetical protein SMc00769 45 COG3800 COG3800, Predicted transcriptional regulator General function prediction only 15964589 Common atpE F0F1 ATP synthase subunit C SMc00870 38 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 15965108 Common rpsJ 30S ribosomal protein S10 SMc01310 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 15966637 Common eda2 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase SMc03153 125 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 15965804 Common ftsZ2 cell division protein FtsZ SMc04296 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 15966559 Common - hypothetical protein SMc04022 17 COG5338 COG5338, Uncharacterized protein conserved in bacteria Function unknown 15966324 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc02343 206 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15964938 Common perM PUTATIVE PERMEASE PROTEIN SMc00616 136 COG0628 PerM, Predicted permease General function prediction only 15965812 Common rpsU1 30S ribosomal protein S21 SMc04320 81 None None None 15964443 Common - hypothetical protein SMc03072 10 None None None 15966244 Common - hypothetical protein SMc01957 4 None None None 15965947 Common - hypothetical protein SMc01848 12 COG5379 BtaA, S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase Lipid metabolism 15965729 Nonpathogen mttB PUTATIVE TRIMETHYLAMINE METHYLTRANSFERASE PROTEIN SMc04330 12 COG5598 COG5598, Trimethylamine:corrinoid methyltransferase Coenzyme metabolism 15965185 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc01017 55 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 15963892 Common cpaA1 PUTATIVE PILUS ASSEMBLY TRANSMEMBRANE PROTEIN SMc04113 24 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15964638 Nonpathogen - hypothetical protein SMc00967 4 COG0824 FcbC, Predicted thioesterase General function prediction only 15964759 Common - hypothetical protein SMc00062 15 COG4991 COG4991, Uncharacterized protein with a bacterial SH3 domain homologue Function unknown 15966781 Common sitC PUTATIVE IRON TRANSPORT SYSTEM MEMBRANE ABC TRANSPORTER PROTEIN SMc02507 189 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15965610 Common gph1 phosphoglycolate phosphatase SMc00151 170 COG0546 Gph, Predicted phosphatases General function prediction only 15965276 Common argS arginyl-tRNA synthetase SMc02073 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15964169 Common mcpX PROBABLE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS) TRANSMEMBRANE PROTEIN SMc01104 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15966921 Common ialA dinucleoside polyphosphate hydrolase SMc03785 116 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 15964716 Common phnA PROBABLE ALKYLPHOSPHONATE UPTAKE PROTEIN SMc00099 106 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 15964511 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc00813 208 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965645 Nonpathogen - hypothetical protein SMc04222 1 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 15965545 Common icd isocitrate dehydrogenase SMc00480 62 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 15967053 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04395 139 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15964306 Common - PUTATIVE SENSORY TRANSDUCTION HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc02249 222 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 15964594 Common - hypothetical protein SMc00865 15 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 15965344 Common - hypothetical protein SMc01200 77 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 15966360 Common - hypothetical protein SMc02432 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 15963779 Common - hypothetical protein SMc02768 150 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 15965240 Common clpA PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT PROTEIN SMc02109 229 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 15965755 Common - hypothetical protein SMc04173 43 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 15966355 Common hyuE PUTATIVE HYDANTOIN RACEMASE PROTEIN SMc02427 46 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 15964989 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc01797 190 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 15964143 Common - PUTATIVE TRNA/RRNA METHYLTRANSFERASE PROTEIN SMc01130 209 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 15965091 Common - PUTATIVE TRNA/RRNA METHYLTRANSFERASE PROTEIN SMc01327 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 15965428 Common ccsA PUTATIVE CYTOCHROME C-TYPE BIOGENESIS PROTEIN SMc00248 75 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 15965363 Common lexA LexA repressor SMc01183 165 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 15966656 Common gltX glutamyl-tRNA synthetase SMc03172 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 15965883 Nonpathogen - hypothetical protein SMc01447 5 None None None 15966117 Common - hypothetical protein SMc02702 44 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 15964201 Common - hypothetical protein SMc01718 78 COG0398 COG0398, Uncharacterized conserved protein Function unknown 15964817 Common rpoZ DNA-directed RNA polymerase subunit omega SMc02408 113 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 15966256 Common - hypothetical protein SMc01969 235 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15965935 Common ftsI PROBABLE PENICILLIN-BINDING TRANSMEMBRANE PROTEIN SMc01860 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 15965510 Nonpathogen - hypothetical protein SMc00510 3 COG5497 COG5497, Predicted secreted protein Function unknown 15964337 Nonpathogen - hypothetical protein SMc02280 2 None None None 15965219 Common TRm20 PUTATIVE TRANSPOSASE PROTEIN SMc01050 84 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15967029 Common - PUTATIVE AMINO-ACID TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc03893 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15965752 Common - PUTATIVE TWO 2-COMPONENT RECEIVER DOMAINS PROTEIN SMc04170 213 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 15965692 Common - 3-oxoacyl-(acyl carrier protein) synthase II SMc04273 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15964294 Common - PUTATIVE ATP-DEPENDENT HELICASE PROTEIN SMc02237 181 COG1201 Lhr, Lhr-like helicases General function prediction only 15967015 Common phbA acetyl-CoA acetyltransferase SMc03879 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 15965378 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01168 155 COG1522 Lrp, Transcriptional regulators Transcription 15964566 Common TRm11b TRANSPOSASE FOR ISRM11/ISRM2011-2 PROTEIN SMc00934 48 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964341 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02284 15 COG5569 COG5569, Uncharacterized conserved protein Function unknown 15966537 Common - hypothetical protein SMc04000 12 COG5481 COG5481, Uncharacterized conserved small protein containing a coiled-coil domain Function unknown 15964419 Common flgH flagellar basal body L-ring protein SMc03034 100 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 15964194 Common - hypothetical protein SMc01724 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 15964694 Common - hypothetical protein SMc00089 22 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 15964659 Common ctaB protoheme IX farnesyltransferase SMc00450 183 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 15965337 Common ppiB PUTATIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PROTEIN SMc01208 198 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 15963944 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02866 106 COG1309 AcrR, Transcriptional regulator Transcription 15965685 Common gnd 6-phosphogluconate dehydrogenase SMc04262 185 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 15964389 Common mcpE PUTATIVE CHEMORECEPTOR (METHYL-ACCEPTING CHEMOTAXIS PROTEIN) SMc03004 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15966800 Common - hypothetical protein SMc02488 42 COG3735 COG3735, Uncharacterized protein conserved in bacteria Function unknown 15966831 Common gcp O-sialoglycoprotein endopeptidase SMc03230 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 15966861 Nonpathogen fixT3 PUTATIVE ANTIKINASE PROTEIN SMc03254 1 None None None 15966421 Common rpmB 50S ribosomal protein L28 SMc00704 142 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 15964626 Common - hypothetical protein SMc00979 7 None None None 15965467 Nonpathogen - hypothetical protein SMc04866 1 None None None 15965640 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc04217 54 COG3577 COG3577, Predicted aspartyl protease General function prediction only 15965296 Common - tRNA (uracil-5-)-methyltransferase Gid SMc02053 166 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 15966981 Common - hypothetical protein SMc03845 33 COG5429 COG5429, Uncharacterized secreted protein Function unknown 15964037 Common rplT 50S ribosomal protein L20 SMc00364 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 15965870 Common - hypothetical protein SMc01434 3 None None None 15965995 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01630 65 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 15964223 Nonpathogen - hypothetical protein SMc02177 4 None None None 15966690 Common maiA MALEYLACETOACETATE ISOMERASE (GLUTATHIONE TRANSFERASE ZETA 1) PROTEIN SMc03206 68 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15966372 Common - hypothetical protein SMc02444 152 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 15963971 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02893 94 COG0583 LysR, Transcriptional regulator Transcription 15966365 Common ptsP PROBABLE PHOSPHOENOLPYRUVATE PHOSPHOTRANSFERASE PTSP (ENZYME I-NTR) PROTEIN SMc02437 234 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 15967092 Common rho transcription termination factor Rho SMc02796 212 COG1158 Rho, Transcription termination factor Transcription 15964423 Common flaB FLAGELLIN B PROTEIN SMc03038 121 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 15964872 Common - hypothetical protein SMc02543 32 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 15964732 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00109 143 COG0789 SoxR, Predicted transcriptional regulators Transcription 15966102 Common - hypothetical protein SMc02687 81 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 15964577 Common - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase SMc00882 124 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 15963907 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02830 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 15965141 Common gph2 PUTATIVE PHOSPHOGLYCOLATE PHOSPHATASE PROTEIN SMc01276 127 COG0546 Gph, Predicted phosphatases General function prediction only 15966536 Common - hypothetical protein SMc03999 18 COG5570 COG5570, Uncharacterized small protein Function unknown 15966771 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02517 154 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15964190 Common ada PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01728 209 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 15963938 Common - hypothetical protein SMc02860 17 COG5588 COG5588, Uncharacterized conserved protein Function unknown 15965666 Common znuB PROBABLE HIGH-AFFINITY ZINC UPTAKE SYSTEM MEMBRANE ABC TRANSPORTER PROTEIN SMc04243 192 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15965300 Common gcvP glycine dehydrogenase SMc02049 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 15966552 Common - hypothetical protein SMc04015 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 15964689 Common - PUTATIVE HYDROLASE PROTEIN SMc00087 127 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 15965325 Common lpsB PUTATIVE LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS MANNOSYLTRANSFERASE PROTEIN SMc01219 207 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 15964894 Common fabD acyl-carrier-protein S-malonyltransferase SMc00571 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 15965101 Common rpoB DNA-directed RNA polymerase subunit beta SMc01317 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 15966560 Common exoN2 PROBABLE UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE PROTEIN SMc04023 229 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 15965827 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04359 13 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 15966932 Common - hypothetical protein SMc03796 126 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 15964273 Common apaG ApaG SMc02135 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 15967009 Common rpoH2 RNA polymerase factor sigma-32 SMc03873 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 15965744 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04162 80 COG0640 ArsR, Predicted transcriptional regulators Transcription 15964176 Common TRm19N NTERM FRAGMENT OF A PUTATIVE TRANSPOSASE PROTEIN SMc01394 32 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964061 Common - hypothetical protein SMc00388 27 COG3608 COG3608, Predicted deacylase General function prediction only 15963932 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc02854 5 None None None 15964282 Common chaA PUTATIVE CALCIUM/PROTON ANTIPORTER TRANSMEMBRANE PROTEIN SMc02224 51 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 15964353 Common - PUTATIVE INTEGRASE/RESOLVASE RECOMBINASE PROTEIN SMc02297 49 COG0582 XerC, Integrase DNA replication, recombination, and repair 15964704 Common - hypothetical protein SMc00032 28 COG3247 HdeD, Uncharacterized conserved protein Function unknown 15963952 Common murQ N-acetylmuramic acid-6-phosphate etherase SMc02874 83 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 15966198 Common smoE PROBABLE SORBITOL-BINDING PERIPLASMIC PROTEIN SMc01496 113 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15965008 Common clpP ATP-dependent Clp protease proteolytic subunit SMc01903 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15966527 Common rpmE 50S ribosomal protein L31 SMc03990 127 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 15964365 Common - hypothetical protein SMc02308 31 COG5328 COG5328, Uncharacterized protein conserved in bacteria Function unknown 15965591 Common - PUTATIVE TRANSCRIPTION REGULATOR HSL-DEPENDENT PROTEIN SMc00170 62 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 15966604 Common - PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE TRANSMEMBRANE PROTEIN SMc03929 206 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 15966186 Nonpathogen - hypothetical protein SMc01508 1 None None None 15966469 Common - hypothetical protein SMc00656 55 COG2388 COG2388, Predicted acetyltransferase General function prediction only 15966618 Common - hypothetical protein SMc03943 111 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 15966697 Common - hypothetical protein SMc03149 3 None None None 15965067 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B SMc01350 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 15966395 Common - hypothetical protein SMc00730 66 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 15967002 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03866 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 15967067 Common - PUTATIVE VIRULENCE-ASSOCIATED PROTEIN HOMOLOGUE SMc04408 26 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 15966473 Common - hypothetical protein SMc00652 30 COG5385 COG5385, Uncharacterized protein conserved in bacteria Function unknown 15964671 Common - HYPOTHETICAL TRANSMEMBRANE SIGNAL PEPTIDE PROTEIN SMc00074 181 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 15964415 Common flgG flagellar basal body rod protein FlgG SMc03030 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 15966988 Common - hypothetical protein SMc03852 11 None None None 15966853 Common - PUTATIVE INTEGRASE/RECOMBINASE PROTEIN SMc03247 190 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15964023 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc00350 73 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966286 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02021 33 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15964633 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase SMc00972 221 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 15966331 Common - hypothetical protein SMc02351 44 COG2346 COG2346, Truncated hemoglobins General function prediction only 15963822 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02588 81 COG4135 COG4135, ABC-type uncharacterized transport system, permease component General function prediction only 15964516 Common oxyR PUTATIVE HYDROGEN PEROXIDE-INDUCIBLE GENES ACTIVATOR (MORPHOLOGY AND AUTO-AGGREGATION CONTROL PROTEIN). SMc00818 192 COG0583 LysR, Transcriptional regulator Transcription 15965341 Common - PUTATIVE TRANSMEMBRANE OXIDOREDUCTASE PROTEIN SMc01204 225 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 15964030 Common efp elongation factor P SMc00357 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 15965053 Common topA DNA topoisomerase I SMc01364 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 15964750 Common phaF2 putative monovalent cation/H+ antiporter subunit F SMc00056 15 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 15964790 Common - hypothetical protein SMc02381 140 COG1733 COG1733, Predicted transcriptional regulators Transcription 15965001 Common - O-acetylhomoserine aminocarboxypropyltransferase SMc01809 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 15966304 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02039 232 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 15965526 Common - phosphoribosylformylglycinamidine synthase subunit PurS SMc00494 97 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 15965969 Common - hypothetical protein SMc01602 73 COG1737 RpiR, Transcriptional regulators Transcription 15966383 Common - hypothetical protein SMc00742 20 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 15965899 Common - hypothetical protein SMc01463 69 COG1926 COG1926, Predicted phosphoribosyltransferases General function prediction only 15966541 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04004 28 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 15966860 Common - PUTATIVE L-PROLINE 3-HYDROXYLASE PROTEIN SMc03253 8 None None None 15964686 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00083 5 None None None 15965393 Common glnA GLUTAMINE SYNTHETASE I PROTEIN SMc00948 227 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 15966805 Common sucB dihydrolipoamide acetyltransferase SMc02483 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15966417 Common gloB PUTATIVE HYDROXYACYLGLUTATHIONE HYDROLASE (GLYOXALASE II) (GLX II) PROTEIN SMc00708 205 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 15964779 Common pepN PROBABLE AMINOPEPTIDASE N PROTEIN SMc02370 159 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 161621431 Common acpXL acyl carrier protein SMc04278 107 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15966940 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase SMc03804 130 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 15964669 Common - hypothetical protein SMc00073 56 COG4233 COG4233, Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis Posttranslational modification, protein turnover, chaperones / Energy production and conversion 15965879 Common gst6 PUTATIVE GLUTATHIONE S-TRANSFERASE PROTEIN SMc01443 74 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 15964852 Common - PUTATIVE TOXIN SECRETION TRANSMEMBRANE PROTEIN SMc02571 122 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 15965285 Common serS seryl-tRNA synthetase SMc02064 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 15965620 Common mobB PROBABLE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN SMc00142 109 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 15964116 Common aarF PROBABLE UBIQUINONE BIOSYNTHESIS PROTEIN SMc01156 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 15966149 Nonpathogen - hypothetical protein SMc02734 3 None None None 15965313 Common gyrA DNA gyrase subunit A SMc01231 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 15965647 Common - hypothetical protein SMc04224 16 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 15964248 Nonpathogen - hypothetical protein SMc02200 1 None None None 15966233 Common livK PUTATIVE LEUCINE-SPECIFIC BINDING PROTEIN PRECURSOR SMc01946 141 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 15966949 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc03813 83 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15966848 Nonpathogen - hypothetical protein SMc03747 1 None None None 15964237 Common fadD acyl-CoA synthetase SMc02162 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15965538 Common - hypothetical protein SMc00534 141 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 15964455 Common edd phosphogluconate dehydratase SMc03068 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 15966397 Common etfA1 PUTATIVE ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT ALPHA-ETF FLAVOPROTEIN SMc00728 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 15965529 Nonpathogen - hypothetical protein SMc00491 1 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 15964867 Common - hypothetical protein SMc02548 65 COG3791 COG3791, Uncharacterized conserved protein Function unknown 15964425 Common flaC FLAGELLIN PROTEIN SMc03040 119 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 15964843 Common - hypothetical protein SMc02633 15 COG5373 COG5373, Predicted membrane protein Function unknown 15966553 Common hss PROBABLE HOMOSPERMIDINE SYNTHASE PROTEIN SMc04016 25 COG5310 COG5310, Homospermidine synthase Secondary metabolites biosynthesis, transport, and catabolism 15964835 Common rkpK UDP-GLUCOSE 6-DEHYDROGENASE PROTEIN SMc02641 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 15965703 Common - hypothetical protein SMc04290 66 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 15966764 Common fdsG formate dehydrogenase subunit gamma SMc02524 156 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 15965028 Common nuoJ NADH dehydrogenase subunit J SMc01923 96 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 15966742 Common hemA 5-aminolevulinate synthase SMc03104 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 15963837 Common soxD SARCOSINE OXIDASE DELTA SUBUNIT PROTEIN SMc02607 36 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 15966079 Nonpathogen - hypothetical protein SMc01580 1 None None None 15964401 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03016 25 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 15963998 Common - hypothetical protein SMc00325 54 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 15965424 Common qor PROBABLE QUINONE OXIDOREDUCTASE PROTEIN SMc00246 186 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 15965700 Common cobE PROBABLE COBALAMIN BIOSYNTHESIS PROTEIN SMc04285 12 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 15963890 Common - hypothetical protein SMc04115 15 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 15964828 Common arsC HYPOTHETICAL ARSENATE REDUCTASE PROTEIN SMc02649 109 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 15966220 Common - hypothetical protein SMc01834 83 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 15966676 Common cobH precorrin-8X methylmutase SMc03192 118 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 15966706 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03140 125 COG2188 PhnF, Transcriptional regulators Transcription 15966925 Common - hypothetical protein SMc03789 71 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 15964599 Common ispB PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN SMc00860 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 15966887 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03288 1 None None None 15964622 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00983 3 None None None 15966084 Common - hypothetical protein SMc01586 8 None None None 15965516 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00504 137 COG0583 LysR, Transcriptional regulator Transcription 15965675 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04252 191 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 15966302 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02037 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15963855 Common - hypothetical protein SMc04150 21 None None None 15965706 Common - PUTATIVE PEPTIDE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc04295 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15966310 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02045 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 15964256 Common - PUTATIVE HELICASE PROTEIN SMc02152 175 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 15964777 Common glnE PUTATIVE GLUTAMATE-AMMONIA-LIGASE ADENYLYLTRANSFERASE PROTEIN SMc02368 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 15966012 Common - PUTATIVE PERIPLASMIC BINDING PROTEIN SMc01647 199 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15966173 Common - hypothetical protein SMc01519 7 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 15966168 Common emrE PUTATIVE METHYL VIOLOGEN/ETHIDIUM RESISTANCE TRANSMEMBRANE PROTEIN SMc01523 133 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 15964406 Common fliM FLAGELLAR MOTOR SWITCH TRANSMEMBRANE PROTEIN SMc03021 14 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 15963866 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc04139 140 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 15966622 Common - hypothetical protein SMc02977 78 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 15965220 Common mazG nucleoside triphosphate pyrophosphohydrolase SMc01051 155 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 15965429 Nonpathogen - hypothetical protein SMc00249 1 None None None 15965491 Common anmK anhydro-N-acetylmuramic acid kinase SMc00527 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 15964717 Common - hypothetical protein SMc00100 76 COG0433 COG0433, Predicted ATPase General function prediction only 15965637 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase SMc04214 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 15966510 Common - hypothetical protein SMc03973 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 15965851 Common abrB PUTATIVE TRANSMEMBRANE PROTEIN SMc01415 54 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 15964617 Common ubiA prenyltransferase SMc00988 160 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 15965590 Common dme malic enzyme SMc00169 210 COG0281 SfcA, Malic enzyme Energy production and conversion 15965595 Common - short chain dehydrogenase SMc00165 234 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15965049 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01368 107 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15965395 Common - PUTATIVE SIGNAL PEPTIDE PROTEIN SMc00950 15 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 15965170 Common - hypothetical protein SMc01002 119 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 15964783 Nonpathogen - HYPOTHETICAL UNKNOWN PROTEIN SMc02374 2 None None None 15966054 Nonpathogen - hypothetical protein SMc01550 3 None None None 15965694 Common - PUTATIVE (3R)-HYDROXYMYRISTOYL-[ACYL CARRIER] DEHYDRATASE TRANSMEMBRANE PROTEIN SMc04277 153 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 15964434 Common flgL flagellar hook-associated protein FlgL SMc03049 18 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 15964386 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc03001 158 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15965773 Nonpathogen - hypothetical protein SMc04191 4 None None None 15964666 Common thrB homoserine kinase SMc00017 69 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 15966816 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02472 155 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 15965169 Common - hypothetical protein SMc01001 39 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 15966094 Common - hypothetical protein SMc02678 34 COG5465 COG5465, Uncharacterized conserved protein Function unknown 15965152 Common - hypothetical protein SMc01265 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 15966577 Common pldB PROBABLE LYSOPHOSPHOLIPASE L2 PROTEIN SMc04041 63 COG2267 PldB, Lysophospholipase Lipid metabolism 15965234 Common - HYPOTHETICAL UNKNOWN PROTEIN SMc02115 14 COG4391 COG4391, Uncharacterized protein conserved in bacteria Function unknown 15966632 Common - hypothetical protein SMc02987 17 COG3742 COG3742, Uncharacterized protein conserved in bacteria Function unknown 15966822 Common sdhB succinate dehydrogenase iron-sulfur subunit SMc02466 193 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 15964608 Common glyS glycyl-tRNA synthetase subunit beta SMc00851 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 15964178 Common dapE succinyl-diaminopimelate desuccinylase SMc01096 206 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 15964028 Common - hypothetical protein SMc00355 125 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 15964601 Common - hypothetical protein SMc00858 48 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 15965317 Common nerA PUTATIVE GLYCEROL TRINITRATE (GTN) REDUCTASE PROTEIN SMc01227 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 15965444 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00263 60 COG1414 IclR, Transcriptional regulator Transcription 15966587 Common rpoE4 PUTATIVE RNA POLYMERASE SIGMA-E FACTOR (SIGMA-24) PROTEIN SMc04051 80 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 15965571 Common fbcB PROBABLE CYTOCHROME B TRANSMEMBRANE PROTEIN SMc00188 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 15965608 Common - hypothetical protein SMc00153 13 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 15965064 Common gatC PUTATIVE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT C PROTEIN SMc01353 135 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 15966036 Common - hypothetical protein SMc01671 22 COG5368 COG5368, Uncharacterized protein conserved in bacteria Function unknown 15964538 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00931 3 None None None 15966506 Common - hypothetical protein SMc03969 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 15964960 Common - hypothetical protein SMc01769 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 15966066 Common - hypothetical protein SMc01562 19 COG4274 COG4274, Uncharacterized conserved protein Function unknown 15964944 Common rnd PROBABLE RIBONUCLEASE D PROTEIN SMc00622 124 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 15964505 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc00807 15 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966485 Common - PUTATIVE HEAT RESISTANT AGGLUTININ 1 SIGNAL PEPTIDE PROTEIN SMc00639 18 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 15964327 Common rkpI CAPSULAR POLYSACCHARIDE BIOSYNTHESIS\EXPORT TRANSMEMBRANE PROTEIN SMc02270 26 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 15965779 Common - PUTATIVE PHAGE REPRESSOR PROTEIN SMc04198 21 COG2932 COG2932, Predicted transcriptional regulator Transcription 15964497 Common - hypothetical protein SMc00799 118 COG1285 SapB, Uncharacterized membrane protein Function unknown 15967035 Nonpathogen - hypothetical protein SMc03899 2 None None None 15965282 Common tatA twin argininte translocase protein A SMc02067 104 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 15966072 Common - hypothetical protein SMc01568 152 COG1610 COG1610, Uncharacterized conserved protein Function unknown 15966131 Common - hypothetical protein SMc02716 4 COG4423 COG4423, Uncharacterized protein conserved in bacteria Function unknown 15964928 Common - PUTATIVE RIBONUCLEASE PROTEIN SMc00606 44 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 15964549 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase SMc00909 211 COG0196 RibF, FAD synthase Coenzyme metabolism 15966945 Common - hypothetical protein SMc03809 36 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 15966329 Common asfA PUTATIVE OXIDOREDUCTASE PROTEIN SMc02349 20 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 15966159 Common - PUTATIVE ALPHA-GLYCOSYLASE PROTEIN SMc01532 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 15966956 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc03820 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15965416 Common moeA PROBABLE MOLYBDOPTERIN BIOSYNTHESIS PROTEIN SMc00238 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 15966897 Common TRm26.2 PUTATIVE TRANSPOSASE NUMBER 2 FOR INSERTION SEQUENCE ISRM26 SMc03300 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965737 Common - hypothetical protein SMc04339 16 None None None 15963969 Common - PUTATIVE OXIDOREDUCTASE TRANSMEMBRANE PROTEIN SMc02891 65 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 15964912 Common - PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN SMc00590 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 15965569 Common - hypothetical protein SMc00190 139 COG4913 COG4913, Uncharacterized protein conserved in bacteria Function unknown 15966992 Common dapF diaminopimelate epimerase SMc03856 171 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 15965383 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00938 2 None None None 15966229 Common ureD PROBABLE UREASE ACCESSORY PROTEIN SMc01942 77 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 15964494 Nonpathogen - hypothetical protein SMc00796 1 None None None 15964162 Common lnt apolipoprotein N-acyltransferase SMc01111 162 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 15963920 Common - hypothetical protein SMc02842 15 COG5488 COG5488, Integral membrane protein Function unknown 15964807 Common TRm11a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM11/ISRM2011-2 SMc02398 16 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965601 Common cgmA CYCLIC BETA-1,2-GLUCAN MODIFICATION TRANSMEMBRANE PROTEIN SMc00195 38 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 15964610 Common - hypothetical protein SMc00849 3 None None None 15964021 Nonpathogen - hypothetical protein SMc00348 4 COG5302 COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid General function prediction only 15964073 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00400 26 COG3489 COG3489, Predicted periplasmic lipoprotein General function prediction only 15963808 Common hisB imidazoleglycerol-phosphate dehydratase SMc02574 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 15965562 Common folK PROBABLE 7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN-PYROPHOSPHOKINASE PROTEIN SMc00465 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 15964394 Common cheR CHEMOTAXIS PROTEIN METHYLTRANSFERASE SMc03009 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 15965556 Common - hypothetical protein SMc00470 4 COG5373 COG5373, Predicted membrane protein Function unknown 15966048 Common - hypothetical protein SMc01745 25 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 15964127 Common - putative deoxyribonucleotide triphosphate pyrophosphatase SMc01146 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 15964919 Common - hypothetical protein SMc00597 24 COG5516 COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding General function prediction only 15964053 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00380 110 COG1846 MarR, Transcriptional regulators Transcription 15966085 Common - hypothetical protein SMc01587 214 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 15966041 Common aacC PROBABLE AMINOGLYCOSIDE N3'-ACETYLTRANSFERASE PROTEIN SMc02813 18 COG2746 COG2746, Aminoglycoside N3'-acetyltransferase Defense mechanisms 15965976 Common fhuA1 PUTATIVE FERRICHROME-IRON RECEPTOR PRECURSOR PROTEIN SMc01611 126 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 15964921 Common moaE PROBABLE MOLYBDOPTERIN MPT CONVERTING FACTOR, SUBUNIT 2 PROTEIN SMc00599 152 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 15964774 Common degP1 PROTEASE PRECURSOR PROTEIN SMc02365 224 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 15966880 Common TRm27.2 transposase SMc03281 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 15966181 Common hmuS PUTATIVE HEMIN TRANSPORT PROTEIN SMc01513 40 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 15966192 Common - PUTATIVE HYDROLASE PHOSPHATASE PROTEIN SMc01502 153 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 15963927 Common - 2-hydroxyacid dehydrogenase SMc02849 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 15963798 Common pckA phosphoenolpyruvate carboxykinase SMc02562 98 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 15963954 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02876 136 COG2188 PhnF, Transcriptional regulators Transcription 15965291 Common - PROBABLE YAJC PROTEIN SMc02058 78 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 15966259 Common ordL1 PUTATIVE OXIDOREDUCTASE PROTEIN SMc01972 123 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15965784 Common fecI PUTATIVE RNA POLYMERASE SIGMA FACTOR FECI PROTEIN SMc04203 107 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 15966471 Common ctrA RESPONSE REGULATOR,CONTROLS CHROMOSOMAL REPLICATION INITIATION PROTEIN SMc00654 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15964741 Common - hypothetical protein SMc00049 75 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 15966428 Common - hypothetical protein SMc00697 219 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 15965406 Common recG PROBABLE ATP-DEPENDENT DNA HELICASE PROTEIN SMc00228 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 15965328 Nonpathogen - hypothetical protein SMc01216 1 None None None 15965940 Common - hypothetical protein SMc01855 146 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 15965312 Common - hypothetical protein SMc01232 156 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 15964133 Common - PROBABLE SIGMA54 MODULATION PROTEIN SMc01140 55 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 15965086 Common ppnK inorganic polyphosphate/ATP-NAD kinase SMc01331 233 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 15964315 Common - PUTATIVE TRANSPORT SYSTEM PERMEASE ABC TRANSPORTER PROTEIN SMc02258 173 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 15964214 Common - hypothetical protein SMc01705 36 COG2606 EbsC, Uncharacterized conserved protein Function unknown 15964184 Common deaD PUTATIVE ATP-DEPENDENT RNA HELICASE PROTEIN SMc01090 239 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 15965508 Common - hypothetical protein SMc00512 51 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15966205 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01819 75 COG1309 AcrR, Transcriptional regulator Transcription 15966907 Common - PUTATIVE PROTEASE TRANSMEMBRANE PROTEIN SMc03769 37 COG3179 COG3179, Predicted chitinase General function prediction only 15965252 Common uppS PUTATIVE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE PROTEIN SMc02097 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 15966970 Common phhB pterin-4-alpha-carbinolamine dehydratase SMc03834 116 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 15964995 Common rpsI 30S ribosomal protein S9 SMc01803 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 15966515 Common tkt2 transketolase SMc03978 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 15966599 Common glgA glycogen synthase SMc03924 145 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 15965958 Common ilvG acetolactate synthase 2 catalytic subunit SMc04455 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 15963897 Common cpaF1 PUTATIVE PILUS ASSEMBLY PROTEIN SMc02820 168 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 15966021 Common - PUTATIVE ALDEHYDE DEHYDROGENASE PROTEIN SMc01656 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15964635 Common - exodeoxyribonuclease VII small subunit SMc00970 116 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 15963985 Common - PUTATIVE AMINO ACID EFFLUX TRANSMEMBRANE PROTEIN SMc02907 117 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15966225 Common - hypothetical protein SMc02046 30 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 15963766 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02781 61 COG0778 NfnB, Nitroreductase Energy production and conversion 15966802 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02486 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966276 Common - hypothetical protein SMc01989 9 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 15965118 Common rpsQ 30S ribosomal protein S17 SMc01300 222 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 15967047 Common ttuD1 PUTATIVE HYDROXYPYRUVATE REDUCTASE PROTEIN SMc04389 86 COG2379 GckA, Putative glycerate kinase Carbohydrate transport and metabolism 15966734 Common metH B12-dependent methionine synthase SMc03112 173 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 15964009 Nonpathogen - hypothetical protein SMc00336 1 None None None 15964901 Common - hypothetical protein SMc00578 2 None None None 15964762 Common - hypothetical protein SMc00457 17 COG5402 COG5402, Uncharacterized conserved protein Function unknown 15964819 Common - hypothetical protein SMc02658 10 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 15965905 Common mcpW PROBABLE METHYL ACCEPTING CHEMOTAXIS TRANSMEMBRANE PROTEIN SMc01469 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 15966210 Common - hypothetical protein SMc01824 24 COG0456 RimI, Acetyltransferases General function prediction only 15966163 Common dppD2 PUTATIVE DIPEPTIDE TRANSPORT ATP-BINDING ABC TRANSPORTER PROTEIN SMc01528 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15965734 Nonpathogen - HYPOTHETICAL LIPOPROTEIN TRANSMEMBRANE SMc04335 1 COG4907 COG4907, Predicted membrane protein Function unknown 15963910 Common mepA penicillin-insensitive murein endopeptidase SMc02833 40 COG3770 MepA, Murein endopeptidase Cell envelope biogenesis, outer membrane 15964540 Common hisZ ATP phosphoribosyltransferase regulatory subunit SMc00918 68 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 15966951 Common - PUTATIVE ATP BINDING ABC TRANSPORTER PROTEIN SMc03815 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 15967019 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase SMc03883 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 15964579 Common - PROBABLE OXIDOREDUCTASE PROTEIN SMc00880 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966766 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02522 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15963877 Common - PUTATIVE HEAVY METAL TRANSPORTING ATPASE PROTEIN SMc04128 231 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 15965027 Common nuoI NADH dehydrogenase subunit I SMc01922 195 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 15965111 Common rplW 50S ribosomal protein L23 SMc01307 227 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 15964016 Common TRm20 PUTATIVE TRANSPOSASE PROTEIN SMc00343 84 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 15967060 Common - hypothetical protein SMc04402 21 None None None 15966755 Common argI1 PROBABLE ARGINASE PROTEIN SMc03091 112 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 15963883 Common deoA thymidine phosphorylase SMc04122 125 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 15965914 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase SMc01881 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 15964084 Common - hypothetical protein SMc00411 45 COG5470 COG5470, Uncharacterized conserved protein Function unknown 15965244 Common - hypothetical protein SMc02105 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 15966434 Common xerD site-specific tyrosine recombinase XerD SMc00691 230 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15966968 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc03832 31 None None None 15964105 Common iolE PUTATIVE MYO-INOSITOL CATABOLISM PROTEIN SMc00433 61 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 15966662 Common - hypothetical protein SMc03178 192 COG3452 COG3452, Predicted periplasmic ligand-binding sensor domain Signal transduction mechanisms 15966602 Common nodN2 PUTATIVE NODULATION PROTEIN SMc03927 71 COG2030 MaoC, Acyl dehydratase Lipid metabolism 15964179 Common mexF1 PROBABLE MULTIDRUG-EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc01095 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 15965274 Common - hypothetical protein SMc02075 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 15965766 Common - PUTATIVE GLYCOSYLTRANSFERASE PROTEIN SMc04185 86 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 15965267 Common tolC PUTATIVE OUTER MEMBRANE SECRETION PROTEIN SMc02082 145 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 15964973 Common - hypothetical protein SMc01782 22 COG5452 COG5452, Uncharacterized conserved protein Function unknown 15964701 Common betB betaine aldehyde dehydrogenase SMc00094 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 15964986 Common - PUTATIVE POLYSACCHARIDE EXPORT SYSTEM PERIPLASMIC TRANSMEMBRANE PROTEIN SMc01794 105 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 15964331 Common rkpU CAPSULE POLYSACCHARIDE EXPORTER PROTEIN SMc02274 82 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 15966499 Nonpathogen sqdD GLYCOSYL TRANSFERASE (SULFOLIPID BIOSYNTHESIS) PROTEIN SMc04081 5 COG5597 COG5597, Alpha-N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 15966296 Common - PUTATIVE PERMEASE PROTEIN SMc02031 110 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15964247 Nonpathogen - hypothetical protein SMc02189 1 None None None 15964978 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01787 91 COG0789 SoxR, Predicted transcriptional regulators Transcription 15967084 Common leuS leucyl-tRNA synthetase SMc02804 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15965199 Common pdhAb pyruvate dehydrogenase subunit beta SMc01031 220 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 15966635 Common - hypothetical protein SMc03151 82 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 15964569 Common mutL DNA mismatch repair protein SMc00932 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 15963770 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02777 79 COG1802 GntR, Transcriptional regulators Transcription 15964984 Common - PUTATIVE SUGAR TRANSFERASE PROTEIN SMc01792 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 15964203 Common - PUTATIVE SENSOR HISTIDINE KINASE TRANSMEMBRANE PROTEIN SMc01716 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15963870 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc04135 43 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15965368 Common - PUTATIVE MULTIDRUG TRANSMEMBRANE RESISTANCE SIGNAL PEPTIDE PROTEIN SMc01178 20 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 15966835 Common - hypothetical protein SMc03234 29 COG3898 COG3898, Uncharacterized membrane-bound protein Function unknown 15963840 Common glxB PUTATIVE AMIDOTRANSFERASE PROTEIN SMc02610 237 COG0067 GltB, Glutamate synthase domain 1 Amino acid transport and metabolism 15965983 Common - PUTATIVE CARBOHYDRATE KINASE PROTEIN SMc01618 116 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15966616 Common - hypothetical protein SMc03941 6 None None None 15967017 Common rpmF 50S ribosomal protein L32 SMc03881 114 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 15964146 Common - hypothetical protein SMc01127 71 COG3176 COG3176, Putative hemolysin General function prediction only 15965643 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc04220 125 COG0640 ArsR, Predicted transcriptional regulators Transcription 15965213 Common ntrY PROBABLE NITROGEN REGULATION TRANSMEMBRANE PROTEIN SMc01044 219 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 15964558 Common - hypothetical protein SMc00899 5 COG4423 COG4423, Uncharacterized protein conserved in bacteria Function unknown 15964721 Common dhe PUTATIVE ALPHA-HALOCARBOXYLIC ACID DEHALOGENASE PROTEIN SMc00103 57 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 15964714 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00098 126 COG1846 MarR, Transcriptional regulators Transcription 15965593 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00167 11 None None None 15965790 Common - hypothetical protein SMc04209 8 None None None 15965801 Common - hypothetical protein SMc04289 98 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 15966658 Common - HYPOTHETICAL UNKNOWN TRANSMEMBRANE PROTEIN SMc03174 3 None None None 15965869 Common - hypothetical protein SMc01433 6 None None None 15965758 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04176 197 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 15963905 Common - PUTATIVE HYDROXYACID DEHYDROGENASE PROTEIN SMc02828 226 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 15965860 Common nthA PROBABLE NITRILE HYDRATASE SUBUNIT ALPHA PROTEIN SMc01424 21 None None None 15963803 Common hisE phosphoribosyl-ATP pyrophosphatase SMc02568 182 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 15966215 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc01829 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 15965408 Common - hypothetical protein SMc00230 96 COG3153 COG3153, Predicted acetyltransferase General function prediction only 15963820 Common helO ATP-DEPENDENT HELICASE PROTEIN SMc02586 132 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 15964189 Common - hypothetical protein SMc01729 28 None None None 15965018 Common nuoB1 NADH dehydrogenase subunit B SMc01913 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 15965017 Common nuoA1 NADH dehydrogenase subunit A SMc01912 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 15964308 Common - aspartate aminotransferase SMc02251 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15966299 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc02034 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15966923 Common - hypothetical protein SMc03787 7 None None None 15964990 Common - hypothetical protein SMc01798 61 COG0622 COG0622, Predicted phosphoesterase General function prediction only 15967050 Common - PUTATIVE DEHYDROGENASE TRANSMEMBRANE PROTEIN SMc04392 75 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 15965867 Common ilvI acetolactate synthase 3 catalytic subunit SMc01431 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 15965097 Common rplK 50S ribosomal protein L11 SMc01321 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 15966905 Common - hypothetical protein SMc03767 60 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 15965911 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01884 8 None None None 15963829 Common metB PROBABLE CYSTATHIONINE GAMMA-SYNTHASE PROTEIN SMc02595 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 15965188 Common - hypothetical protein SMc01020 48 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 15965881 Nonpathogen - hypothetical protein SMc01445 5 None None None 15965401 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00959 4 None None None 15965120 Common rplX 50S ribosomal protein L24 SMc01298 213 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 15965465 Nonpathogen - hypothetical protein SMc00284 1 None None None 15964887 Common - PUTATIVE TRANSPORT PROTEIN TRANSMEMBRANE SMc00564 131 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 15963946 Common - PUTATIVE MULTIDRUG EFFLUX SYSTEM PROTEIN SMc02868 161 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 15964296 Common - hypothetical protein SMc02239 82 COG2128 COG2128, Uncharacterized conserved protein Function unknown 15965949 Common - PUTATIVE HYDROLASE GLYCOSIDASE PROTEIN SMc01846 44 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 15965697 Common cobC PROBABLE COBALAMIN BIOSYNTHESIS PROTEIN PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE SMc04281 217 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 15964656 Common ialB hypothetical protein SMc00071 13 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 15965129 Common secY preprotein translocase subunit SecY SMc01289 242 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 15965293 Common - hypothetical protein SMc02056 42 COG3737 COG3737, Uncharacterized conserved protein Function unknown 15965985 Common eryB glycerol-3-phosphate dehydrogenase SMc01620 148 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 15966492 Common tolB translocation protein TolB SMc04461 147 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 15966119 Common - hypothetical protein SMc02704 65 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 15963842 Common glxD PUTATIVE OXIDOREDUCTASE PROTEIN SMc02612 175 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 15966463 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00662 2 None None None 15966004 Common - PUTATIVE ACYL-COA DEHYDROGENASE PROTEIN SMc01639 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 15963834 Common folD1 PROBABLE BIFUNCTIONAL PROTEIN : METHYLENETETRAHYDROFOLATE DEHYDROGENASE ; METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE SMc02604 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 15964997 Common - hypothetical protein SMc01805 40 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 15966990 Common ftsY PUTATIVE CELL DIVISION PROTEIN SMc03854 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 15964090 Common - hypothetical protein SMc00418 83 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 15965250 Common pyrH uridylate kinase SMc02099 223 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 15966786 Common atpC F0F1 ATP synthase subunit epsilon SMc02502 170 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 15966110 Common - translation-associated GTPase SMc02695 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 15966126 Common - hypothetical protein SMc02711 35 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 15964347 Common - PUTATIVE DNA-INVERTASE PROTEIN SMc02287 135 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 15966272 Common coxP PROBABLE CYTOCHROME-C OXIDASE PROTEIN SMc01985 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 15965920 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase SMc01875 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 15966546 Common - hypothetical protein SMc04009 38 COG3750 COG3750, Uncharacterized protein conserved in bacteria Function unknown 15965841 Common - hypothetical protein SMc01409 10 None None None 15966322 Common - PUTATIVE SUGAR KINASE PROTEIN SMc02341 183 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 15965187 Common - hypothetical protein SMc01019 6 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 15966423 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc00702 23 COG4246 COG4246, Uncharacterized protein conserved in bacteria Function unknown 15966597 Common glgB1 glycogen branching enzyme SMc03922 144 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 15965272 Common xthA2 PUTATIVE EXODEOXYRIBONUCLEASE III PROTEIN SMc02077 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 161621428 Common rpsU 30S ribosomal protein S21 SMc03934 40 None None None 15965361 Common - HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc01185 39 COG5361 COG5361, Uncharacterized conserved protein Function unknown 15964035 Common infC translation initiation factor IF-3 SMc00362 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 15966219 Common - hypothetical protein SMc01833 50 COG1359 COG1359, Uncharacterized conserved protein Function unknown 15966374 Common - hypothetical protein SMc02446 4 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 15966774 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc02514 36 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 15965398 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00953 87 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 15966983 Common ccmA PUTATIVE HEME EXPORTER A (CYTOCHROME C-TYPE BIOGENESIS ATP-BINDING PROTEIN) ABC TRANSPORTER SMc03847 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 15965907 Common senC PUTATIVE CYTOCHROME C OXIDASE ASSEMBLY FACTOR TRANSMEMBRANE PROTEIN SMc01471 107 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 15965306 Nonpathogen - HYPOTHETICAL/UNKNOWN TRANSMEMBRANE PROTEIN SMc01239 1 None None None 15964063 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc00390 3 None None None 15964436 Common flbT flagellar biosynthesis repressor FlbT SMc03051 21 COG5443 FlbT, Flagellar biosynthesis regulator FlbT Cell motility and secretion 15965486 Common - hypothetical protein SMc00532 171 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 15966444 Common lrp PROBABLE LEUCINE-RESPONSIVE REGULATORY PROTEIN SMc00681 161 COG1522 Lrp, Transcriptional regulators Transcription 15965888 Common - hypothetical protein SMc01452 29 COG4321 COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis General function prediction only 15965354 Common metG methionyl-tRNA synthetase SMc01192 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15964527 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00829 150 COG2186 FadR, Transcriptional regulators Transcription 15966855 Common - hypothetical protein SMc03249 19 None None None 15965623 Common - PUTATIVE AMINO-ACID BINDING PERIPLASMIC PROTEIN SMc00140 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15967000 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC (SIGNAL PEPTIDE) ABC TRANSPORTER PROTEIN SMc03864 168 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15964007 Common cmk cytidylate kinase SMc00334 205 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 15967007 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc03871 249 COG3840 ThiQ, ABC-type thiamine transport system, ATPase component Coenzyme metabolism 15965013 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc01908 109 COG1846 MarR, Transcriptional regulators Transcription 15964164 Common metK S-adenosylmethionine synthetase SMc01109 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 15964584 Common corA2 PROBABLE MAGNESIUM AND COBALT TRANSPORT TRANSMEMBRANE PROTEIN SMc00874 158 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 15964445 Common - PUTATIVE GLYCOSYLTRANSFERASE PROTEIN SMc03058 19 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 15965942 Common - hypothetical protein SMc01853 63 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 15964468 Common potG PROBABLE PUTRESCINE TRANSPORT ATP-BINDING PROTEIN SMc00771 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 15966354 Common - hypothetical protein SMc02426 89 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 15964271 Common argF1 ornithine carbamoyltransferase SMc02137 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 15965051 Common - hypothetical protein SMc01366 28 COG5349 COG5349, Uncharacterized protein conserved in bacteria Function unknown 15966908 Common rplU 50S ribosomal protein L21 SMc03770 198 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 15964099 Common prfC PROBABLE PEPTIDE CHAIN RELEASE FACTOR RF-3 PROTEIN SMc00427 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 15964135 Common - PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN SMc01138 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 15964241 Common - PUTATIVE ACYLTRANSFERASE PROTEIN SMc02158 43 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15966401 Common - HYPOTHETICAL/UNKNOWN PROTEIN SMc00724 2 None None None 15966466 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase SMc00659 214 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 15967023 Common - PUTATIVE AMINO ACID EFFLUX PROTEIN SMc03887 106 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 15965456 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00275 105 COG0583 LysR, Transcriptional regulator Transcription 15965410 Common glmU PROBABLE UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE PROTEIN SMc00232 232 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 15963934 Common - PUTATIVE PENICILLIN-BINDING PROTEIN SMc02856 203 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 15965720 Nonpathogen - hypothetical protein SMc04312 1 None None None 15967065 Common - PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN SMc04407 113 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15966478 Common rluD PUTATIVE RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE PROTEIN SMc00647 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 15966284 Common - PUTATIVE PERMEASE ABC TRANSPORTER PROTEIN SMc02019 119 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 15964153 Common - hypothetical protein SMc01120 26 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 15966184 Common hmuV PUTATIVE HEMIN TRANSPORT SYSTEM ATP-BINDING ABC TRANSPORTER PROTEIN SMc01510 249 COG4559 COG4559, ABC-type hemin transport system, ATPase component Inorganic ion transport and metabolism 15965069 Common - NADH dehydrogenase SMc01348 38 COG3761 COG3761, NADH:ubiquinone oxidoreductase 17.2 kD subunit Energy production and conversion 15963917 Common TRm3 TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM3 SMc02839 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 15965130 Common adk adenylate kinase SMc01288 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 15964232 Common frcK putative fructose transport system kinase SMc02167 89 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 15966475 Common - hypothetical protein SMc00650 93 COG5283 COG5283, Phage-related tail protein Function unknown 15966790 Common atpH F0F1 ATP synthase subunit delta SMc02498 173 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 15964570 Common - PUTATIVE CONTAINS A 2-COMPONENT RECEIVER DOMAIN PROTEIN SMc00888 208 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 15966543 Common - hypothetical protein SMc04006 18 COG5480 COG5480, Predicted integral membrane protein Function unknown 15965892 Nonpathogen - hypothetical protein SMc01456 5 None None None 15965139 Common sugE PROBABLE CHAPERONE HOMOLOGUE TRANSMEMBRANE PROTEIN SMc01278 127 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 15965777 Nonpathogen - hypothetical protein SMc04196 2 None None None 15964050 Common - hypothetical protein SMc00377 35 COG1396 HipB, Predicted transcriptional regulators Transcription 15965036 Common - hypothetical protein SMc01931 24 COG5454 COG5454, Predicted secreted protein Function unknown 15966667 Common phaF putative monovalent cation/H+ antiporter subunit F SMc03183 63 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 15966807 Common sucD succinyl-CoA synthetase subunit alpha SMc02481 208 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 15965062 Common - hypothetical protein SMc01355 167 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 15966707 Common - hypothetical protein SMc03139 32 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 15966878 Common TRm28.2 PUTATIVE TRANSPOSASE NUMBER 2 FOR INSERTION SEQUENCE ISRM28 SMc03279 51 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964228 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc02172 117 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 15964235 Common frk PROBABLE FRUCTOKINASE PROTEIN SMc02164 140 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 15965371 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc01175 235 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 15963983 Common dnaX DNA polymerase III subunits gamma and tau SMc02905 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 15966379 Common - PUTATIVE OUTER MEMBRANE PROTEIN SMc02451 159 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 15964854 Common - hypothetical protein SMc02565 63 COG4111 COG4111, Uncharacterized conserved protein General function prediction only 15965967 Common - PUTATIVE AMINO-ACID PERMEASE PROTEIN SMc01597 89 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15965834 Common - PUTATIVE ASPARTATE RACEMASE PROTEIN SMc01404 82 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 15966157 Common - beta amino acid--pyruvate transaminase SMc01534 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 15965528 Common - hypothetical protein SMc00492 6 None None None 15964696 Common cysD sulfate adenylyltransferase subunit 2 SMc00091 141 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 15965742 Common - PUTATIVE CHLORAMPHENICOL PHOSPHOTRANSFERASE PROTEIN SMc04451 9 COG3896 COG3896, Chloramphenicol 3-O-phosphotransferase Defense mechanisms 15964812 Common dapA dihydrodipicolinate synthase SMc02404 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 15964880 Common alr PUTATIVE ALANINE RACEMASE PROTEIN SMc00557 197 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 15965173 Common folE GTP cyclohydrolase I SMc01005 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 15965339 Common tgt queuine tRNA-ribosyltransferase SMc01206 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 15966934 Common galM PROBABLE ALDOSE 1-EPIMERASE PROTEIN SMc03798 97 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 15964192 Common argB acetylglutamate kinase SMc01726 225 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 15964417 Common flgI flagellar basal body P-ring protein SMc03032 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 161621433 Common ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein SMc01040 195 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 15964624 Common - PUTATIVE FERREDOXIN PROTEIN SMc00981 149 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 15965960 Common - hypothetical protein SMc01574 10 None None None 15964267 Common phoU PROBABLE PHOSPHATE TRANSPORT SYSTEM TRANSCRIPTIONAL REGULATOR PROTEIN SMc02141 200 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 15965449 Common - PUTATIVE OXIDOREDUCTASE PROTEIN SMc00268 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15964684 Common smc PUTATIVE CHROMOSOME PARTITION PROTEIN SMc00024 176 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15964564 Common - hypothetical protein SMc00893 73 COG0546 Gph, Predicted phosphatases General function prediction only 15965664 Common - PUTATIVE ACETYLTRANSFERASE PROTEIN SMc04241 211 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 15966386 Common - hypothetical protein SMc00739 46 COG0456 RimI, Acetyltransferases General function prediction only 15964221 Common - hypothetical protein SMc02179 79 COG1409 Icc, Predicted phosphohydrolases General function prediction only 15966681 Common modB molybdate ABC transporter permease protein SMc03197 228 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 15966107 Common rplY 50S ribosomal protein L25/general stress protein Ctc SMc02692 191 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 15966349 Common - cytosine deaminase SMc02420 73 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 15966684 Common - PUTATIVE AMINO ACID DEAMINASE TRANSMEMBRANE PROTEIN SMc03200 84 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15966927 Common - hypothetical protein SMc03791 36 COG3824 COG3824, Uncharacterized protein conserved in bacteria Function unknown 15966715 Common - PUTATIVE AMINO ACID-BINDING PERIPLASMIC ABC TRANSPORTER PROTEIN SMc03131 159 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15964874 Common - phosphatidylserine decarboxylase SMc00551 95 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 15966725 Common - PUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN SMc03121 102 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 15966962 Common argG argininosuccinate synthase SMc03826 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 15966100 Common - hypothetical protein SMc02685 9 None None None 15964643 Common - PUTATIVE ATP-BINDING ABC TRANSPORTER PROTEIN SMc00962 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 15966569 Common pip3 PUTATIVE PROLINE IMINOPEPTIDASE PROTEIN SMc04033 165 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 15967072 Common pdxK pyridoxamine kinase SMc04084 61 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 15966867 Nonpathogen - HYPOTHETICAL/UNKNOWN PROTEIN SMc03262 1 None None None 15964370 Common - hypothetical protein SMc04431 14 COG2929 COG2929, Uncharacterized protein conserved in bacteria Function unknown 15965453 Common - hypothetical protein SMc00272 13 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 15964043 Common - PUTATIVE TRANSCRIPTION REGULATOR PROTEIN SMc00370 162 COG0583 LysR, Transcriptional regulator Transcription 15964739 Common - hypothetical protein SMc00115 41 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 15966246 Common TRm1a TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT ISRM1 SMc01959 31 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 15964805 Common - PROBABLE OUTER MEMBRANE PROTEIN SMc02396 13 None None None 15966534 Common - hypothetical protein SMc03997 46 COG0730 COG0730, Predicted permeases General function prediction only 15966914 Common proA gamma-glutamyl phosphate reductase SMc03777 188 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 15964111 Common dfp bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase SMc01161 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 15966451 Common hutC PUTATIVE HISTIDINE UTILIZATION REPRESSOR TRANSCRIPTION REGULATOR PROTEIN SMc00674 123 COG2188 PhnF, Transcriptional regulators Transcription 15966367 Common - hypothetical protein SMc02439 72 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 15964518 Common - PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN SMc00820 188 COG0583 LysR, Transcriptional regulator Transcription 15965509 Common rpe PROBABLE D-RIBULOSE-5-PHOSPHATE 3-EPIMERASE PROTEIN SMc00511 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 15967094 Common hemE uroporphyrinogen decarboxylase SMc02794 174 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 15964757 Common - hypothetical protein SMc00061 14 COG5447 COG5447, Uncharacterized conserved protein Function unknown 15964755 Common - PUTATIVE SENSOR HISTIDINE KINASE PROTEIN SMc00059 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 15964351 Common hsdS PUTATIVE SPECIFICITY PROTEIN S SMc02295 84 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 15964489 Common - hypothetical protein SMc00791 131 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 15965689 Common - hypothetical protein SMc04266 34 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 15964180 Common mexE1 PUTATIVE MULTIDRUG EFFLUX SYSTEM TRANSMEMBRANE PROTEIN SMc01094 157 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 15965799 Common - PUTATIVE TRANSMEMBRANE PROTEIN SMc04283 121 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 15966931 Common leuD isopropylmalate isomerase small subunit SMc03795 212 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 15966525 Common - hypothetical protein SMc03988 8 COG5509 COG5509, Uncharacterized small protein containing a coiled-coil domain Function unknown 15965259 Common - hypothetical protein SMc02090 43 COG3494 COG3494, Uncharacterized protein conserved in bacteria Function unknown 15965825 Common - CONSERVED HYPOTHETICAL SIGNAL PEPTIDE PROTEIN SMc04352 17 COG3672 COG3672, Predicted periplasmic protein Function unknown