Listeria monocytogenes str. 4b F2365, complete genome NC_002973 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 46906268 Common - amino acid permease family protein LMOf2365_0046 180 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 46907237 Common - 3-hydroxyisobutyrate dehydrogenase family protein LMOf2365_1026 193 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 46908399 Common - cyclic nucleotide-binding protein LMOf2365_2198 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908854 Common - hypothetical protein LMOf2365_2655 4 None None None 46908067 Common carB carbamoyl phosphate synthase large subunit LMOf2365_1863 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 46907658 Common - hypothetical protein LMOf2365_1449 41 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 46908012 Common exoA exodeoxyribonuclease LMOf2365_1807 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 46908645 Common - hypothetical protein LMOf2365_2446 101 COG0391 COG0391, Uncharacterized conserved protein Function unknown 46908136 Common - bacteriocin transport accessory protein, putative LMOf2365_1932 5 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 46907855 Common - polysaccharide biosynthesis family protein LMOf2365_1647 33 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 46906333 Common - hypothetical protein LMOf2365_0111 1 None None None 46906845 Common - hypothetical protein LMOf2365_0629 15 COG4709 COG4709, Predicted membrane protein Function unknown 46906834 Common - hypothetical protein LMOf2365_0618 28 COG4852 COG4852, Predicted membrane protein Function unknown 46906727 Common - hypothetical protein LMOf2365_0510 21 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 46908610 Common - hypothetical protein LMOf2365_2410 17 COG4283 COG4283, Uncharacterized conserved protein Function unknown 46906439 Common - lipoprotein, putative LMOf2365_0218 8 COG4808 COG4808, Uncharacterized protein conserved in bacteria Function unknown 46907274 Common moeA molybdopterin biosynthesis protein MoeA LMOf2365_1063 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 46906497 Common - hypothetical protein LMOf2365_0276 44 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 46907377 Common - propanediol utilization protein PduJ, putative LMOf2365_1167 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46908301 Common - hypothetical protein LMOf2365_2097 1 None None None 46906649 Common - hypothetical protein LMOf2365_0431 2 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 46908866 Common - cell division protein, FtsW/RodA/SpoVE family LMOf2365_2667 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 46908268 Common ftsZ cell division protein FtsZ LMOf2365_2064 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 46906756 Common - glutamine amidotransferase, class I LMOf2365_0540 108 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 46908281 Common panE 2-dehydropantoate 2-reductase LMOf2365_2077 71 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 46908716 Common - thymidine kinase LMOf2365_2517 103 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 46908252 Common nadB L-aspartate oxidase LMOf2365_2048 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 46906319 Pathogen - hypothetical protein LMOf2365_0097 2 None None None 46906720 Pathogen - hypothetical protein LMOf2365_0503 1 None None None 46907585 Common nusB transcription antitermination protein NusB LMOf2365_1376 204 COG0781 NusB, Transcription termination factor Transcription 46907595 Common - phosphate acetyl/butyryltransferase family protein LMOf2365_1386 121 COG0280 Pta, Phosphotransacetylase Energy production and conversion 46908548 Pathogen - hypothetical protein LMOf2365_2348 1 None None None 46906407 Common - cell wall surface anchor family protein LMOf2365_0186 4 None None None 46907538 Common - hypothetical protein LMOf2365_1329 1 None None None 46906289 Common - hypothetical protein LMOf2365_0067 8 COG4842 COG4842, Uncharacterized protein conserved in bacteria Function unknown 46906306 Common - hypothetical protein LMOf2365_0084 2 None None None 46908939 Common - hypothetical protein LMOf2365_2740 6 None None None 46909039 Common - transcriptional regulator, AraC family LMOf2365_2841 53 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 46906330 Common - ATP synthase F1, gamma subunit, putative LMOf2365_0108 206 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 46906261 Common - hydrolase, haloacid dehalogenase-like family LMOf2365_0039 134 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46908394 Common - hypothetical protein LMOf2365_2193 19 COG4813 ThuA, Trehalose utilization protein Carbohydrate transport and metabolism 46908928 Common - SH3 domain protein LMOf2365_2729 9 None None None 46906492 Common gtfA sucrose phosphorylase LMOf2365_0271 61 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46908615 Pathogen - hypothetical protein LMOf2365_2415 1 None None None 46907929 Common - acetyltransferase, GNAT family LMOf2365_1722 135 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46908416 Common - iron compound ABC transporter, ATP-binding protein LMOf2365_2215 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 46907890 Common - phosphosugar-binding transcriptional regulator, RpiR family LMOf2365_1683 95 COG1737 RpiR, Transcriptional regulators Transcription 46907650 Common - glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein LMOf2365_1441 161 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 46906964 Common fliF flagellar MS-ring protein LMOf2365_0749 121 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 46907715 Common - conserved hypothetical protein TIGR00488 LMOf2365_1506 42 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 46908623 Common est-1 carboxylesterase LMOf2365_2423 39 COG1647 COG1647, Esterase/lipase General function prediction only 46907014 Common - PTS system, mannose/fructose/sorbose family, IIC component LMOf2365_0799 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 46908743 Common - amidase, putative LMOf2365_2544 66 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 46908886 Common - hypothetical protein LMOf2365_2687 1 None None None 46907632 Common mutL DNA mismatch repair protein LMOf2365_1423 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 46908557 Common - putative monovalent cation/H+ antiporter subunit G LMOf2365_2357 48 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 46907682 Common rpoD RNA polymerase sigma factor RpoD LMOf2365_1473 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 46907920 Common mutY A/G-specific adenine glycosylase LMOf2365_1713 233 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 46906517 Common - hydrolase, haloacid dehalogenase-like family LMOf2365_0296 130 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46907523 Common - hypothetical protein LMOf2365_1314 30 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 46906875 Common - PTS system IIA 2 domain protein LMOf2365_0659 34 COG3711 BglG, Transcriptional antiterminator Transcription 46907256 Common - hypothetical protein LMOf2365_1045 1 COG4129 COG4129, Predicted membrane protein Function unknown 46906893 Common - hypothetical protein LMOf2365_0678 1 None None None 46907778 Common radC DNA repair protein RadC LMOf2365_1569 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 46907831 Common - hypothetical protein LMOf2365_1622 5 COG4980 GvpP, Gas vesicle protein General function prediction only 46908893 Common - cell wall surface anchor family protein LMOf2365_2694 1 None None None 46908530 Common - hypothetical protein LMOf2365_2330 118 COG1511 COG1511, Predicted membrane protein Function unknown 46907528 Common - acetyltransferase, GNAT family LMOf2365_1319 57 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46906919 Pathogen - hypothetical protein LMOf2365_0703 1 None None None 46908541 Common - aminotransferase, class I LMOf2365_2341 232 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 46907765 Common obgE GTPase ObgE LMOf2365_1556 249 COG0536 Obg, Predicted GTPase General function prediction only 46908324 Common - lipase LMOf2365_2121 134 COG0657 Aes, Esterase/lipase Lipid metabolism 46908774 Common - MgtC family protein LMOf2365_2575 79 COG1285 SapB, Uncharacterized membrane protein Function unknown 46906577 Common - hypothetical protein LMOf2365_0357 5 None None None 46908867 Common - magnesium-translocating P-type ATPase LMOf2365_2668 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 46906816 Common ogt-1 methylated-DNA-protein-cysteine methyltransferase LMOf2365_0600 149 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 46906489 Common - sugar ABC transporter, permease protein LMOf2365_0268 146 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 46907992 Common - hypothetical protein LMOf2365_1787 1 None None None 46908764 Common morA morphine 6-dehydrogenase LMOf2365_2565 188 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 46906286 Pathogen - hypothetical protein LMOf2365_0064 1 None None None 46907590 Common - cold-shock domain family protein LMOf2365_1381 184 COG1278 CspC, Cold shock proteins Transcription 46907303 Common - techoic acid ABC transporter, ATP-binding protein, putative LMOf2365_1092 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 46907326 Pathogen - hypothetical protein LMOf2365_1115 1 None None None 46907670 Common - AzlC family protein LMOf2365_1461 109 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 46907554 Common truB tRNA pseudouridine synthase B LMOf2365_1345 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 46908627 Common - hypothetical protein LMOf2365_2427 1 None None None 46908405 Common pct propionate CoA-transferase LMOf2365_2204 99 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 46906631 Common - hypothetical protein LMOf2365_0412 1 None None None 46906886 Common - oxidoreductase, aldo/keto reductase family LMOf2365_0671 197 COG4989 COG4989, Predicted oxidoreductase General function prediction only 46908696 Common fabZ (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase LMOf2365_2497 188 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 46906852 Common - ABC transporter, ATP-binding/permease protein LMOf2365_0636 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46907235 Common ptsI phosphoenolpyruvate-protein phosphotransferase LMOf2365_1024 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 46908267 Common - conserved hypothetical protein TIGR00044 LMOf2365_2063 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 46907203 Common dltD DltD protein LMOf2365_0991 15 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 46908428 Common - oligopeptide ABC transporter, permease protein LMOf2365_2227 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 46908221 Common - transcriptional regulator, LacI family LMOf2365_2017 130 COG1609 PurR, Transcriptional regulators Transcription 46906456 Pathogen - hypothetical protein LMOf2365_0235 1 None None None 46909012 Common - hypothetical protein LMOf2365_2814 47 COG4198 COG4198, Uncharacterized conserved protein Function unknown 46906859 Common - acetyltransferase, GNAT family LMOf2365_0643 41 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46908882 Common - hypothetical protein LMOf2365_2683 155 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 46908812 Common - hypothetical protein LMOf2365_2613 21 COG4769 COG4769, Predicted membrane protein Function unknown 46907875 Common - exonuclease SbcD, putative LMOf2365_1667 123 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 46908016 Pathogen - hypothetical protein LMOf2365_1811 1 None None None 46907880 Common - ABC transporter, ATP-binding/permease protein LMOf2365_1672 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46907961 Common - ABC transporter, permease protein LMOf2365_1755 144 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 46907127 Common sigB RNA polymerase sigma factor SigB LMOf2365_0914 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 46906610 Common - hypothetical protein LMOf2365_0391 1 None None None 46908497 Common - hypothetical protein LMOf2365_2297 72 COG1284 COG1284, Uncharacterized conserved protein Function unknown 46906444 Common - acetyltransferase, GNAT family LMOf2365_0223 2 COG0456 RimI, Acetyltransferases General function prediction only 46906617 Common - thiamine-pyrophosphate-requiring enzyme LMOf2365_0398 221 COG3962 COG3962, Acetolactate synthase Amino acid transport and metabolism 46907133 Common - hypothetical protein LMOf2365_0920 3 None None None 46908481 Common - hypothetical protein LMOf2365_2281 77 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 46908839 Common tkt-3 transketolase LMOf2365_2640 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 46908821 Common - PTS system, lactose/cellobiose specific IIB subunit LMOf2365_2622 33 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 46907242 Common - transcriptional regulator, LysR family LMOf2365_1031 192 COG0583 LysR, Transcriptional regulator Transcription 46906371 Common - EAL domain protein LMOf2365_0149 161 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 46906500 Common - ABC transporter, ATP-binding protein, putative LMOf2365_0279 233 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46909022 Common - glycosyl transferase, family 65 LMOf2365_2824 50 COG1554 ATH1, Trehalose and maltose hydrolases (possible phosphorylases) Carbohydrate transport and metabolism 46906828 Common - preprotein translocase subunit SecA LMOf2365_0612 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 46907295 Common typA GTP-binding protein TypA LMOf2365_1084 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 46906682 Common - hypothetical protein LMOf2365_0464 5 None None None 46906592 Common - transcriptional regulator, DeoR family LMOf2365_0372 117 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 46907311 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LMOf2365_1100 192 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 46906432 Common prfA listeriolysin regulatory protein LMOf2365_0211 11 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908344 Common nagA-2 N-acetylglucosamine-6-phosphate deacetylase LMOf2365_2141 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 46908445 Common hemH ferrochelatase LMOf2365_2244 148 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 46907827 Common rpsD 30S ribosomal protein S4 LMOf2365_1618 216 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 46908730 Common pyrG CTP synthetase LMOf2365_2531 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 46908734 Common - hypothetical protein LMOf2365_2535 82 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 46907640 Common flaR DNA topology modulation protein FlaR LMOf2365_1431 35 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 46908215 Common leuB 3-isopropylmalate dehydrogenase LMOf2365_2011 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 46908499 Common - fumarylacetoacetate hydrolase family protein LMOf2365_2299 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 46907983 Common - putative lipid kinase LMOf2365_1778 117 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 46906644 Common - glyoxalase family protein LMOf2365_0426 19 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46906305 Common - hypothetical protein LMOf2365_0083 2 None None None 46907150 Common - PTS system, IIC component LMOf2365_0937 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908671 Common - phosphate ABC transporter, phosphate-binding protein LMOf2365_2472 164 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 46907495 Common clpX ATP-dependent protease ATP-binding subunit LMOf2365_1286 232 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 46906954 Common - hypothetical protein LMOf2365_0739 3 COG1728 COG1728, Uncharacterized protein conserved in bacteria Function unknown 46907190 Common - transcriptional regulator, GntR family LMOf2365_0978 139 COG2188 PhnF, Transcriptional regulators Transcription 46908385 Common - thioredoxin, putative LMOf2365_2184 6 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 46909028 Common - ABC transporter, substrate-binding protein LMOf2365_2830 95 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 46908595 Common - thioredoxin, putative LMOf2365_2395 27 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 46906535 Common - hypothetical protein LMOf2365_0314 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 46908073 Common - hypothetical protein LMOf2365_1869 1 None None None 46906805 Common gdhA glutamate dehydrogenase LMOf2365_0589 171 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 46908536 Pathogen - hypothetical protein LMOf2365_2336 1 None None None 46906462 Common ctsR transcriptional regulator CtsR LMOf2365_0241 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 46907206 Common dltA D-alanine--D-alanyl carrier protein ligase LMOf2365_0994 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 46907344 Common - hypothetical protein LMOf2365_1134 18 COG2267 PldB, Lysophospholipase Lipid metabolism 46907872 Common - hypothetical protein LMOf2365_1664 1 None None None 46906826 Common - hypothetical protein LMOf2365_0610 139 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 46906661 Common - PTS system, fructose-specific, IIB component LMOf2365_0443 68 COG1445 FrwB, Phosphotransferase system fructose-specific component IIB Carbohydrate transport and metabolism 46907689 Common - hypothetical protein LMOf2365_1480 1 None None None 46906917 Common - ABC transporter, ATP-binding protein LMOf2365_0701 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46907742 Common - recombination factor protein RarA LMOf2365_1533 247 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 46907506 Common hslU ATP-dependent protease ATP-binding subunit LMOf2365_1297 211 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 46907054 Common - hypothetical protein LMOf2365_0840 2 None None None 46907426 Common - cobalt ABC transporter, ATP-binding protein LMOf2365_1216 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 46906867 Common - hypothetical protein LMOf2365_0651 1 None None None 46907198 Common - TPR domain protein LMOf2365_0986 12 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 46907109 Common - PTS system, beta-glucoside-specific, IIC component LMOf2365_0895 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908316 Common - lipoprotein, putative LMOf2365_2112 1 None None None 46906557 Common bglH-1 beta-glucosidase LMOf2365_0337 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46907217 Common - hypothetical protein LMOf2365_1005 10 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 46907034 Pathogen - hypothetical protein LMOf2365_0820 1 None None None 46908197 Common - ABC transporter, permease protein, putative LMOf2365_1993 28 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 46907030 Common - blue-light photoreceptor LMOf2365_0816 109 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46906984 Common - DNA-binding protein LMOf2365_0769 19 COG1396 HipB, Predicted transcriptional regulators Transcription 46906524 Common - ABC transporter, permease protein LMOf2365_0303 108 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 46907291 Common - hypothetical protein LMOf2365_1080 6 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 46908165 Common - heptaprenyl diphosphate synthase component I, putative LMOf2365_1961 4 None None None 46907669 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase LMOf2365_1460 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 46906376 Common - oligopeptide ABC transporter, permease protein LMOf2365_0154 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 46908055 Common fmt methionyl-tRNA formyltransferase LMOf2365_1851 221 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 46907228 Common ogt-2 methylated-DNA-protein-cysteine methyltransferase LMOf2365_1017 204 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 46907705 Common - hypothetical protein LMOf2365_1496 126 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 46906459 Common folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase LMOf2365_0238 169 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 46908086 Common - hypothetical protein LMOf2365_1882 92 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 46906930 Common flhB flagellar biosynthesis protein FlhB LMOf2365_0715 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 46908234 Common alsS acetolactate synthase LMOf2365_2030 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 46908566 Common - hypothetical protein LMOf2365_2366 4 COG4844 COG4844, Uncharacterized protein conserved in bacteria Function unknown 46907820 Common argB acetylglutamate kinase LMOf2365_1611 218 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 46906754 Common prs-2 ribose-phosphate pyrophosphokinase LMOf2365_0538 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 46907177 Common - lipoprotein, putative LMOf2365_0965 127 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 46908336 Common - pyridoxine biosynthesis protein LMOf2365_2133 87 COG0214 SNZ1, Pyridoxine biosynthesis enzyme Coenzyme metabolism 46907456 Common murI glutamate racemase LMOf2365_1246 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 46906992 Common - transcriptional regulator, Crp family LMOf2365_0777 27 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908916 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 LMOf2365_2717 156 COG0546 Gph, Predicted phosphatases General function prediction only 46906743 Common rpiB-2 ribose 5-phosphate isomerase B LMOf2365_0527 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 46907188 Common nagA-1 N-acetylglucosamine-6-phosphate deacetylase LMOf2365_0976 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 46907567 Common - hypothetical protein LMOf2365_1358 1 None None None 46907387 Common - L-threonine-O-3-phosphate decarboxylase LMOf2365_1177 238 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 46907100 Common - hypothetical protein LMOf2365_0886 20 COG4708 COG4708, Predicted membrane protein Function unknown 46906776 Common - hypothetical protein LMOf2365_0560 5 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 46908248 Common ileS isoleucyl-tRNA synthetase LMOf2365_2044 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46907020 Common - phenazine biosynthesis protein, PhzF family LMOf2365_0806 114 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 46907385 Common glpF-1 glycerol uptake facilitator protein LMOf2365_1175 134 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 46907003 Common - lipoyltransferase and lipoate-protein ligase family protein LMOf2365_0788 85 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 46907147 Common - formate/nitrite transporter family protein LMOf2365_0934 99 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 46906392 Common - cyclic nucleotide-binding protein LMOf2365_0171 2 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46907695 Common - PhoH family protein LMOf2365_1486 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 46907350 Common - transcriptional regulator, MerR family LMOf2365_1140 88 COG0789 SoxR, Predicted transcriptional regulators Transcription 46907895 Common metK S-adenosylmethionine synthetase LMOf2365_1688 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 46907798 Common - methylcitrate synthase LMOf2365_1589 194 COG0372 GltA, Citrate synthase Energy production and conversion 46907183 Common - hypothetical protein LMOf2365_0971 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 46908872 Common - Orn/Lys/Arg decarboxylase LMOf2365_2673 88 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 46907803 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha LMOf2365_1594 177 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 46906766 Common - glycosyl hydrolase, family 4 LMOf2365_0550 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 46907082 Common - hypothetical protein LMOf2365_0868 5 None None None 46906469 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase LMOf2365_0248 188 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 46908682 Common secA preprotein translocase subunit SecA LMOf2365_2483 216 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 46906409 Common metG methionyl-tRNA synthetase LMOf2365_0188 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46906710 Common - hypothetical protein LMOf2365_0493 4 None None None 46908891 Common - gluconate kinase, putative LMOf2365_2692 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 46906258 Common - hypothetical protein LMOf2365_0036 2 None None None 46907336 Common - hypothetical protein LMOf2365_1126 2 None None None 46908678 Common ftsX cell division ABC transporter, permease protein FtsX LMOf2365_2479 124 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 46906295 Common - hypothetical protein LMOf2365_0073 2 None None None 46908198 Common - ABC transporter, ATP-binding protein LMOf2365_1994 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46907729 Common - hypothetical protein LMOf2365_1520 13 COG3906 COG3906, Uncharacterized protein conserved in bacteria Function unknown 46907814 Common - thiol peroxidase LMOf2365_1605 131 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 46908364 Common - transcriptional regulator, LacI family LMOf2365_2162 126 COG1609 PurR, Transcriptional regulators Transcription 46908692 Common - N-acylamino acid racemase LMOf2365_2493 142 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 46908004 Common purK phosphoribosylaminoimidazole carboxylase, ATPase subunit LMOf2365_1799 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 46908795 Common rpsQ 30S ribosomal protein S17 LMOf2365_2596 229 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 46907942 Common - aminopeptidase LMOf2365_1735 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 46908143 Common - oxidoreductase, FAD-binding LMOf2365_1939 119 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 46907704 Common - coproporphyrinogen III oxidase LMOf2365_1495 212 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 46908433 Common - OsmC/Ohr family protein LMOf2365_2232 107 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 46908637 Common - hypothetical protein LMOf2365_2438 1 None None None 46908526 Common - hypothetical protein LMOf2365_2326 1 None None None 46908932 Common - hypothetical protein LMOf2365_2733 11 COG3070 TfoX, Regulator of competence-specific genes Transcription 46907922 Common - dUTPase family protein LMOf2365_1715 145 COG0756 Dut, dUTPase Nucleotide transport and metabolism 46907056 Common - oxidoreductase, aldo/keto reductase family LMOf2365_0842 185 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 46907608 Common - hypothetical protein LMOf2365_1399 1 None None None 46906549 Common - lipoprotein, putative LMOf2365_0329 1 None None None 46907093 Common treC-1 trehalose-6-phosphate hydrolase LMOf2365_0879 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46906568 Pathogen - hypothetical protein LMOf2365_0348 1 None None None 46906608 Common - PTS system, beta-glucoside-specific, IIC component LMOf2365_0389 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908358 Common - hypothetical protein LMOf2365_2156 4 COG5521 COG5521, Predicted integral membrane protein Function unknown 46908971 Common bglX-2 beta-glucosidase LMOf2365_2772 145 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 46908241 Common - hypothetical protein LMOf2365_2037 19 COG3538 COG3538, Uncharacterized conserved protein Function unknown 46907852 Common - hypothetical protein LMOf2365_1644 220 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 46907293 Common - hypothetical protein LMOf2365_1082 8 COG4493 COG4493, Uncharacterized protein conserved in bacteria Function unknown 46907330 Pathogen - CAAX amino terminal protease family protein LMOf2365_1119 2 None None None 46906467 Common - PIN/TRAM domain protein LMOf2365_0246 46 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 46907733 Common - ABC transporter, ATP-binding protein LMOf2365_1524 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46908630 Common tpiA-2 triosephosphate isomerase LMOf2365_2430 219 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 46908958 Common - ABC transporter, ATP-binding protein LMOf2365_2759 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908138 Common - tRNA CCA-pyrophosphorylase LMOf2365_1934 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 85700164 Common - dihydrouridine synthase family protein LMOf2365_0239 205 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 46908191 Common - iron compound ABC transporter, permease protein LMOf2365_1987 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 46908111 Common - cold-shock domain family protein LMOf2365_1908 183 COG1278 CspC, Cold shock proteins Transcription 46906340 Common - hypothetical protein LMOf2365_0118 10 COG2327 WcaK, Uncharacterized conserved protein Function unknown 46907171 Common - low molecular weight phosphotyrosine protein phosphatase family protein LMOf2365_0959 131 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 46906619 Common - hypothetical protein LMOf2365_0400 1 None None None 46908832 Common fusA elongation factor G LMOf2365_2633 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 46906904 Common - hypothetical protein LMOf2365_0689 1 None None None 46907397 Common eutL ethanolamine utilization protein LMOf2365_1187 15 COG4816 EutL, Ethanolamine utilization protein Amino acid transport and metabolism 46909017 Common - hypothetical protein LMOf2365_2819 1 None None None 46908598 Common - cell division protein, FtsW/RodA/SpoVE family LMOf2365_2398 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 46906844 Common - transcriptional regulator, PadR family LMOf2365_0628 53 COG1695 COG1695, Predicted transcriptional regulators Transcription 46906628 Pathogen - hypothetical protein LMOf2365_0409 1 None None None 46907628 Common - acetyltransferase, GNAT family LMOf2365_1419 114 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 46908658 Common - PspC domain protein LMOf2365_2459 6 COG3595 COG3595, Uncharacterized conserved protein Function unknown 46906429 Common spoVG-2 regulatory protein SpoVG LMOf2365_0208 24 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 46907215 Common - hypothetical protein LMOf2365_1003 87 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 46907633 Common glpP glycerol uptake operon antiterminator regulatory protein LMOf2365_1424 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 46906654 Common - hypothetical protein LMOf2365_0436 1 None None None 46906227 Common - MATE efflux family protein LMOf2365_0003 176 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 46908991 Common - hypothetical protein LMOf2365_2792 1 None None None 46908859 Common kdpC K+-transporting ATPase, C subunit LMOf2365_2660 93 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 46908186 Common lysA diaminopimelate decarboxylase LMOf2365_1982 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 46906717 Pathogen - hypothetical protein LMOf2365_0500 1 None None None 46908978 Common soj sporulation initiation inhibitor protein SOJ LMOf2365_2779 229 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 46908458 Common - hypothetical protein LMOf2365_2257 25 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 46906421 Common - hypothetical protein LMOf2365_0200 18 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 46908786 Common rpmD 50S ribosomal protein L30 LMOf2365_2587 124 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 46906563 Common - transcriptional activator, putative LMOf2365_0343 5 None None None 46907584 Common - hypothetical protein LMOf2365_1375 38 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 46906323 Common - oxidoreductase, aldo/keto reductase family LMOf2365_0101 204 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 46906584 Common - short chain dehydrogenase LMOf2365_0364 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46907283 Common def peptide deformylase LMOf2365_1072 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 46906245 Common - hypothetical protein LMOf2365_0022 8 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 46908133 Common panD aspartate alpha-decarboxylase LMOf2365_1929 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 46907574 Common gcvT glycine cleavage system T protein LMOf2365_1365 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 46907722 Common - MTA/SAH nucleosidase LMOf2365_1513 100 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 46906839 Common metX homoserine O-acetyltransferase LMOf2365_0623 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 46906934 Common cheR chemotaxis protein methyltransferase CheR LMOf2365_0719 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 46906575 Common - hypothetical protein LMOf2365_0355 3 None None None 46908382 Common - hypothetical protein LMOf2365_2181 16 COG1694 MazG, Predicted pyrophosphatase General function prediction only 46908605 Common gadG glutamate decarboxylase gamma LMOf2365_2405 64 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 46908571 Common - NifU family protein LMOf2365_2371 68 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 46906785 Common - penicillin-binding protein, putative LMOf2365_0569 142 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 46908207 Common - hypothetical protein LMOf2365_2003 9 COG5506 COG5506, Uncharacterized conserved protein Function unknown 46907420 Common - uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase LMOf2365_1210 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 46907069 Common uhpT sugar phosphate antiporter LMOf2365_0855 48 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 46907251 Common - hypothetical protein LMOf2365_1040 43 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 46907079 Common - glutamine ABC transporter, ATP-binding protein LMOf2365_0865 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 46907117 Common hemG protoporphyrinogen oxidase LMOf2365_0903 51 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 46907060 Common - pyruvate flavodoxin/ferredoxin oxidoreductase LMOf2365_0846 123 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 46907443 Common - ABC transporter, permease protein LMOf2365_1233 135 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 46907882 Common - hypothetical protein LMOf2365_1674 3 None None None 46908506 Common fruB 1-phosphofructokinase LMOf2365_2306 97 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 46907412 Common cbiC precorrin-8X methylmutase LMOf2365_1202 112 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 46908128 Common dnaD DNA replication protein DnaD LMOf2365_1924 24 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 46906629 Common - hypothetical protein LMOf2365_0410 1 None None None 46908707 Common atpB F0F1 ATP synthase subunit A LMOf2365_2508 202 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 46908755 Common fdhD formate dehydrogenase accessory protein LMOf2365_2556 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 46907239 Common - hypothetical protein LMOf2365_1028 1 None None None 46908488 Common - hypothetical protein LMOf2365_2288 1 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 46908621 Common smpB SsrA-binding protein LMOf2365_2421 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 46907579 Common - hypothetical protein LMOf2365_1370 31 COG3872 COG3872, Predicted metal-dependent enzyme General function prediction only 46907319 Common - hypothetical protein LMOf2365_1108 8 COG1359 COG1359, Uncharacterized conserved protein Function unknown 46907549 Common - hypothetical protein LMOf2365_1340 40 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 46908907 Common - putative 6-phosphogluconolactonase LMOf2365_2708 80 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 46907977 Common - ABC transporter, ATP-binding protein LMOf2365_1772 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46906977 Common glmS D-fructose-6-phosphate amidotransferase LMOf2365_0762 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 46907610 Common - hypothetical protein LMOf2365_1401 1 COG4699 COG4699, Uncharacterized protein conserved in bacteria Function unknown 46906940 Common cheV chemotaxis protein CheV LMOf2365_0725 166 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 46907677 Common nfo endonuclease IV LMOf2365_1468 105 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 46907089 Common - DNA-binding transcriptional regulator, putative LMOf2365_0875 123 COG1609 PurR, Transcriptional regulators Transcription 46907339 Common - hypothetical protein LMOf2365_1129 1 None None None 46907542 Common cdsA phosphatidate cytidylyltransferase LMOf2365_1333 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 161611350 Common rpmG 50S ribosomal protein L33 LMOf2365_1352 94 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 46908945 Common guaB inosine-5'-monophosphate dehydrogenase LMOf2365_2746 237 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 46907447 Common - ribonuclease HIII LMOf2365_1237 36 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 46908091 Common - methionine sulfoxide reductase B LMOf2365_1887 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 46907044 Common - enoyl-(acyl-carrier-protein) reductase LMOf2365_0830 144 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 46908044 Common sdhA L-serine dehydratase, iron-sulfur-dependent, alpha subunit LMOf2365_1840 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 46908804 Common rplC 50S ribosomal protein L3 LMOf2365_2605 248 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 46907908 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase LMOf2365_1701 108 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 46906354 Common - repressor protein, putative LMOf2365_0132 32 COG1476 COG1476, Predicted transcriptional regulators Transcription 46907224 Common - membrane protein, TerC family LMOf2365_1013 88 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 46907359 Common - PduS protein LMOf2365_1149 151 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 46906349 Common - transcriptional regulator, AraC family LMOf2365_0127 142 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 46908121 Common - hypothetical protein LMOf2365_1917 15 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 46907477 Common - hypothetical protein LMOf2365_1268 1 None None None 46906386 Common - hypothetical protein LMOf2365_0165 2 None None None 46908250 Common - 3H domain protein LMOf2365_2046 15 COG1827 COG1827, Predicted small molecule binding protein (contains 3H domain) General function prediction only 46908157 Common tyrA prephenate dehydrogenase LMOf2365_1953 153 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 46907952 Common - helicase domain protein LMOf2365_1746 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 46908937 Common - ABC transporter, ATP-binding/permease protein LMOf2365_2738 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46906818 Common - xanthine/uracil permease family protein LMOf2365_0602 135 COG2252 COG2252, Permeases General function prediction only 46908732 Common argS arginyl-tRNA synthetase LMOf2365_2533 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46908884 Common - hypothetical protein LMOf2365_2685 4 None None None 46907776 Common mreB cell shape determining protein MreB LMOf2365_1567 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 46906241 Common qoxC quinol oxidase AA3, subunit III LMOf2365_0018 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 46907580 Common - peptidase, M24 family LMOf2365_1371 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 46909037 Common rhaB rhamnulokinase LMOf2365_2839 74 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 46908625 Common est-2 carboxylesterase LMOf2365_2425 52 COG1647 COG1647, Esterase/lipase General function prediction only 46907717 Common - conserved hypothetical protein TIGR00253 LMOf2365_1508 91 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 46908387 Common nrdF ribonucleotide-diphosphate reductase subunit beta LMOf2365_2186 158 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 46906496 Common rpoC DNA-directed RNA polymerase subunit beta' LMOf2365_0275 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 46907360 Common - PduT protein LMOf2365_1150 18 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46907864 Common adhE aldehyde-alcohol dehydrogenase LMOf2365_1656 176 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 46907710 Common - comEC/Rec2 family protein LMOf2365_1501 206 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 46906966 Common fliH flagellar assembly protein H LMOf2365_0751 2 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 46908776 Common - hypothetical protein LMOf2365_2577 14 None None None 46908647 Common - phosphoglucomutase/phosphomannomutase family protein LMOf2365_2448 237 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 46906615 Common - IolB protein, putative LMOf2365_0396 50 COG3718 IolB, Uncharacterized enzyme involved in inositol metabolism Carbohydrate transport and metabolism 46906693 Common - hypothetical protein LMOf2365_0476 7 COG4908 COG4908, Uncharacterized protein containing a NRPS condensation (elongation) domain General function prediction only 46907684 Common - hypothetical protein LMOf2365_1475 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 46907927 Common - hypothetical protein LMOf2365_1720 6 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 46907230 Common - CAAX amino terminal protease family protein LMOf2365_1019 3 None None None 46907165 Common - lipoyltransferase and lipoate-protein ligase family protein LMOf2365_0952 85 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 46907392 Common - transcription antiterminator response regulator, putative LMOf2365_1182 223 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 46908329 Common - hypothetical protein LMOf2365_2126 74 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 46908551 Common - putative monovalent cation/H+ antiporter subunit A LMOf2365_2351 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 46907597 Common - dihydrolipoamide dehydrogenase LMOf2365_1388 240 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 46908283 Common - hypothetical protein LMOf2365_2079 12 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 46906952 Common - hypothetical protein LMOf2365_0737 1 None None None 46908593 Common - DNA-binding response regulator LMOf2365_2393 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46907514 Common parC DNA topoisomerase IV subunit A LMOf2365_1305 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 46906288 Pathogen - hypothetical protein LMOf2365_0066 1 None None None 46907990 Common - geranylgeranylglyceryl phosphate synthase-like protein LMOf2365_1785 32 COG1646 COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold General function prediction only 46907760 Common ruvB Holliday junction DNA helicase B LMOf2365_1551 219 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 46907711 Common - zinc-binding, ComEB family protein LMOf2365_1502 87 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 46907007 Common - conserved hypothetical protein TIGR00147 LMOf2365_0792 119 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 46908880 Common - hypothetical protein LMOf2365_2681 2 None None None 46906487 Common - transcriptional regulator, DegA family LMOf2365_0266 129 COG1609 PurR, Transcriptional regulators Transcription 46907841 Common - hypothetical protein LMOf2365_1632 1 None None None 46907552 Common - hypothetical protein LMOf2365_1343 30 COG1550 COG1550, Uncharacterized protein conserved in bacteria Function unknown 46908436 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III LMOf2365_2235 223 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 46906842 Common - cyclic nucleotide-binding protein LMOf2365_0626 4 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908769 Common rplM 50S ribosomal protein L13 LMOf2365_2570 232 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 46907417 Common cbiG cobalamin biosynthesis protein CbiG LMOf2365_1207 84 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 46908051 Common - ribosome-associated GTPase LMOf2365_1847 163 COG1162 COG1162, Predicted GTPases General function prediction only 46906237 Common - phosphomevalonate kinase LMOf2365_0013 20 COG1577 ERG12, Mevalonate kinase Lipid metabolism 46907603 Pathogen - hypothetical protein LMOf2365_1394 1 None None None 46908762 Common - ATP-binding protein, Mrp/Nbp35 family LMOf2365_2563 228 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 46906515 Common - hypothetical protein LMOf2365_0294 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46906366 Common - hypothetical protein LMOf2365_0144 1 None None None 46908322 Common - MATE efflux family protein LMOf2365_2119 100 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 46907504 Common xerC integrase/recombinase XerC LMOf2365_1295 227 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 46907367 Common - transcriptional regulator PocR, putative LMOf2365_1157 131 COG4936 PocR, Predicted sensor domain Signal transduction mechanisms / Transcription 46907836 Common murC UDP-N-acetylmuramate--L-alanine ligase LMOf2365_1627 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 46907767 Common glpF-2 glycerol uptake facilitator protein LMOf2365_1558 133 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 46908418 Common - iron compound ABC transporter, iron compound-binding protein LMOf2365_2217 39 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 46908353 Common - acetyltransferase, GNAT family LMOf2365_2150 33 COG0456 RimI, Acetyltransferases General function prediction only 46908106 Common folA dihydrofolate reductase LMOf2365_1903 148 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 46906490 Common - sugar ABC transporter, permease protein LMOf2365_0269 165 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 46907301 Common - ABC transporter, substrate-binding protein LMOf2365_1090 167 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 46908577 Common - Ser/Thr protein phosphatase family protein LMOf2365_2377 111 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 46908397 Common - transcriptional regulator, AraC family LMOf2365_2196 138 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 46908114 Common rpsN 30S ribosomal protein S14 LMOf2365_1911 212 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 46906888 Common - hypothetical protein LMOf2365_0673 14 None None None 46907656 Common opuCA glycine betaine/L-proline ABC transporter, ATP-binding protein LMOf2365_1447 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 46906581 Common - hypothetical protein LMOf2365_0361 3 None None None 46908160 Common aroB 3-dehydroquinate synthase LMOf2365_1956 207 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 46908403 Common - enoyl-(acyl-carrier-protein) reductase LMOf2365_2202 151 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 46906418 Common - hypothetical protein LMOf2365_0197 34 COG3583 COG3583, Uncharacterized protein conserved in bacteria Function unknown 46906832 Common - hypothetical protein LMOf2365_0616 5 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 46906986 Common - transcriptional regulator, GntR family LMOf2365_0771 68 COG1725 COG1725, Predicted transcriptional regulators Transcription 46907379 Common eutJ ethanolamine utilization protein LMOf2365_1169 22 COG4820 EutJ, Ethanolamine utilization protein, possible chaperonin Amino acid transport and metabolism 46907679 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LMOf2365_1470 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 46906938 Common - hypothetical protein LMOf2365_0723 2 None None None 46906906 Common - transcriptional activator, putative LMOf2365_0691 7 None None None 46907276 Common moaE molybdenum cofactor biosynthesis protein E LMOf2365_1065 150 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 46908259 Common - hypothetical protein LMOf2365_2055 22 None None None 46908456 Common - Ser/Thr protein phosphatase family protein LMOf2365_2255 104 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 46908516 Common - amino acid ABC transporter, ATP-binding protein LMOf2365_2316 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 46908178 Common - cell wall surface anchor family protein LMOf2365_1974 19 None None None 46908729 Common - N-acetylmuramoyl-L-alanine amidase, family 2 LMOf2365_2530 8 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 46907897 Common - hypothetical protein LMOf2365_1690 57 None None None 46906810 Common hisH imidazole glycerol phosphate synthase subunit HisH LMOf2365_0594 216 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 46908101 Common - hypothetical protein LMOf2365_1898 9 COG4129 COG4129, Predicted membrane protein Function unknown 46906731 Common - hypothetical protein LMOf2365_0515 40 COG0778 NfnB, Nitroreductase Energy production and conversion 46906758 Common - transcriptional regulator, MarR family LMOf2365_0542 39 COG1846 MarR, Transcriptional regulators Transcription 46906361 Common - hypothetical protein LMOf2365_0139 12 COG5412 COG5412, Phage-related protein Function unknown 46906928 Common fliQ flagellar biosynthesis protein FliQ LMOf2365_0713 13 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 46907115 Common - hypothetical protein LMOf2365_0901 28 COG3402 COG3402, Uncharacterized conserved protein Function unknown 46907536 Common - hypothetical protein LMOf2365_1327 17 COG3969 COG3969, Predicted phosphoadenosine phosphosulfate sulfotransferase General function prediction only 46906820 Common - transcriptional regulator, GntR family LMOf2365_0604 117 COG2188 PhnF, Transcriptional regulators Transcription 46908559 Common - hypothetical protein LMOf2365_2359 29 COG1963 COG1963, Uncharacterized protein conserved in bacteria Function unknown 46908546 Common - hypothetical protein LMOf2365_2346 1 None None None 46908149 Common - peptidase, putative LMOf2365_1945 131 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 46906266 Common - SIS domain protein LMOf2365_0044 171 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 46908714 Common - modification methylase, HemK family LMOf2365_2515 214 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 46906725 Common - antigen, putative LMOf2365_0508 25 COG4716 COG4716, Myosin-crossreactive antigen Function unknown 46907848 Common - transcriptional regulator, MarR family LMOf2365_1640 88 COG1846 MarR, Transcriptional regulators Transcription 46906773 Common - hypothetical protein LMOf2365_0557 6 COG5298 COG5298, Uncharacterized protein conserved in bacteria Function unknown 46907175 Common - peroxide resistance protein Dpr LMOf2365_0963 132 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 46908864 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_2665 31 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46908720 Common rpmE2 50S ribosomal protein L31 type B LMOf2365_2521 153 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 46906642 Common - hypothetical protein LMOf2365_0424 1 None None None 46907591 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase LMOf2365_1382 221 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 46907985 Common gatA glutamyl-tRNA(Gln) amidotransferase, A subunit LMOf2365_1780 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 46906308 Common - hypothetical protein LMOf2365_0086 1 None None None 46906405 Common - glucose uptake protein LMOf2365_0184 11 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 46906506 Common - transcriptional regulator, MarR family LMOf2365_0285 27 COG1846 MarR, Transcriptional regulators Transcription 46908538 Common pgi glucose-6-phosphate isomerase LMOf2365_2338 205 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 46906546 Common - DNA-binding protein LMOf2365_0326 5 None None None 46908801 Common rplB 50S ribosomal protein L2 LMOf2365_2602 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 46907484 Common - hydrolase, alpha/beta fold family LMOf2365_1275 82 COG2267 PldB, Lysophospholipase Lipid metabolism 46906520 Common nrdD anaerobic ribonucleoside triphosphate reductase LMOf2365_0299 97 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 46907347 Common - ABC transporter, ATP-binding/permease protein LMOf2365_1137 246 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 46906526 Common - ABC transporter, substrate-binding protein, putative LMOf2365_0305 101 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 46906336 Common - PTS system, mannose/fructose/sorbose family, IIC component LMOf2365_0114 32 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 46906863 Common - protein kinase domain protein LMOf2365_0647 146 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 46906396 Common - hypothetical protein LMOf2365_0175 12 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46908844 Common - PTS system, galactitol-specific, IIC component LMOf2365_2645 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 46908379 Common - transcriptional regulator, LysR family LMOf2365_2178 191 COG0583 LysR, Transcriptional regulator Transcription 46906529 Common - sensory box histidine kinase LMOf2365_0308 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 46907497 Common - signal peptidase I LMOf2365_1288 178 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 46908930 Common - cyclic nucleotide-binding protein LMOf2365_2731 12 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46906660 Common - PTS system, fructose-specific, IIA component LMOf2365_0442 145 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46907016 Common - acyl-carrier protein phosphodiesterase, putative LMOf2365_0802 95 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 46908581 Common - hypothetical protein LMOf2365_2381 3 None None None 46908688 Common - conserved hypothetical protein TIGR00257 LMOf2365_2489 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 46906865 Common - hypothetical protein LMOf2365_0649 7 COG5562 COG5562, Phage envelope protein General function prediction only 46908479 Common - hypothetical protein LMOf2365_2279 21 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 46906378 Common - hypothetical protein LMOf2365_0156 1 None None None 46906798 Common - CBS domain protein LMOf2365_0582 8 COG0517 COG0517, FOG: CBS domain General function prediction only 46908042 Common - fatty acid biosynthesis transcriptional regulator LMOf2365_1838 17 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 46908084 Common - heavy metal-binding protein LMOf2365_1880 152 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 46908098 Common - hypothetical protein LMOf2365_1895 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 46906594 Common - internalin LMOf2365_0374 38 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46907748 Common hisS histidyl-tRNA synthetase LMOf2365_1539 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46908296 Common - hypothetical protein LMOf2365_2092 15 COG4549 COG4549, Uncharacterized protein conserved in bacteria Function unknown 46906276 Common ssb-1 single-strand binding protein LMOf2365_0054 214 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 46907546 Common polC DNA polymerase III, alpha chain, Gram-positive type LMOf2365_1337 217 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 46907672 Common prsA-1 protein export protein LMOf2365_1463 143 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 46907978 Common - hypothetical protein LMOf2365_1773 1 None None None 46907966 Common - acetyltransferase, GNAT family LMOf2365_1760 84 COG3153 COG3153, Predicted acetyltransferase General function prediction only 46907157 Common coaA pantothenate kinase LMOf2365_0944 75 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 46907226 Common - hypothetical protein LMOf2365_1015 1 None None None 46907613 Common - hypothetical protein LMOf2365_1404 48 COG1284 COG1284, Uncharacterized conserved protein Function unknown 46908075 Common - ribosomal large subunit pseudouridine synthase, RluD subfamily LMOf2365_1871 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 46906335 Common manL PTS system, mannose-specific, IIAB component LMOf2365_0113 95 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 46908236 Common - ABC transporter, permease protein, putative LMOf2365_2032 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 46906279 Common - putative accessory gene regulator protein LMOf2365_0057 4 COG4512 AgrB, Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Transcription 46908223 Common deoR transcriptional repressor DeoR LMOf2365_2019 69 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 46906633 Common - transcriptional regulator, GntR family LMOf2365_0414 23 COG1802 GntR, Transcriptional regulators Transcription 46907879 Common - ABC transporter, ATP-binding/permease protein LMOf2365_1671 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46906684 Common - hypothetical protein LMOf2365_0466 1 None None None 46906896 Common - phage infection protein LMOf2365_0681 103 COG1511 COG1511, Predicted membrane protein Function unknown 46908271 Common murG N-acetylglucosaminyl transferase LMOf2365_2067 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 46907753 Common recJ single-stranded-DNA-specific exonuclease RecJ LMOf2365_1544 203 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 46907700 Common dnaJ chaperone protein DnaJ LMOf2365_1491 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 46908311 Common - O-sialoglycoprotein endopeptidase LMOf2365_2107 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 46908338 Common eutD phosphotransacetylase LMOf2365_2135 166 COG0280 Pta, Phosphotransacetylase Energy production and conversion 46908736 Common - HD domain protein LMOf2365_2537 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 46908069 Common pyrC dihydroorotase LMOf2365_1865 218 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 46908694 Common - LysM domain protein LMOf2365_2495 41 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 46907892 Common - conserved hypothetical protein TIGR01212 LMOf2365_1685 79 COG1242 COG1242, Predicted Fe-S oxidoreductase General function prediction only 46908879 Common - oxidoreductase, aldo/keto reductase family LMOf2365_2680 179 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 46908370 Common - fructose-bisphosphate aldolase, class II family LMOf2365_2168 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 46908303 Common groEL chaperonin GroEL LMOf2365_2099 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 46908784 Common secY preprotein translocase subunit SecY LMOf2365_2585 234 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 46908495 Common - hypothetical protein LMOf2365_2295 27 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 46906685 Common - hypothetical protein LMOf2365_0467 1 None None None 46908265 Common - YGGT family protein LMOf2365_2061 34 COG0762 COG0762, Predicted integral membrane protein Function unknown 46908963 Pathogen - hypothetical protein LMOf2365_2764 1 None None None 46908389 Common - hypothetical protein LMOf2365_2188 1 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 46907857 Common trpA tryptophan synthase subunit alpha LMOf2365_1649 217 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 46909026 Common - ABC transporter, permease protein LMOf2365_2828 188 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 46908163 Common hepB heptaprenyl diphosphate synthase, component II LMOf2365_1959 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 46906482 Common rplA 50S ribosomal protein L1 LMOf2365_0261 242 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 46907786 Common hemC porphobilinogen deaminase LMOf2365_1577 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 46908483 Common - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family LMOf2365_2283 191 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 46906663 Common - glycosyl hydrolase, family 38 LMOf2365_0445 48 COG0383 AMS1, Alpha-mannosidase Carbohydrate transport and metabolism 46907040 Common - spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein LMOf2365_0826 139 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 46906673 Common - hypothetical protein LMOf2365_0455 1 None None None 46907244 Common - peptidase, M20/M25/M40 family LMOf2365_1033 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 46907289 Common - lactate/malate dehydrogenase family protein LMOf2365_1078 137 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 46906325 Common - hypothetical protein LMOf2365_0103 3 None None None 46906604 Common - hypothetical protein LMOf2365_0385 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 46906901 Common - serine/threonine protein phosphatase family protein LMOf2365_0686 126 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 46907829 Common ccpA catabolite control protein A LMOf2365_1620 129 COG1609 PurR, Transcriptional regulators Transcription 46906310 Common - hypothetical protein LMOf2365_0088 1 None None None 46907352 Common - hypothetical protein LMOf2365_1142 1 COG0456 RimI, Acetyltransferases General function prediction only 46907135 Common celB PTS system, cellobiose-specific, IIC component LMOf2365_0922 39 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46909021 Common garK-2 glycerate kinase 2 LMOf2365_2823 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 46908745 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_2546 181 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 46907622 Common - 3-ketoacyl-acyl carrier protein reductase, putative LMOf2365_1413 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46908346 Common manA mannose-6-phosphate isomerase, class I LMOf2365_2143 53 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 46908213 Common ilvC ketol-acid reductoisomerase LMOf2365_2009 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 46908982 Common - phosphosugar-binding transcriptional regulator, RpiR family LMOf2365_2783 116 COG1737 RpiR, Transcriptional regulators Transcription 46908408 Common - 3-ketoacyl-(acyl-carrier-protein) reductase LMOf2365_2207 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46908689 Common - acetyltransferase, GNAT family LMOf2365_2490 27 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46907193 Common - peptidase, U32 family LMOf2365_0981 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 46906446 Common mfd transcription-repair coupling factor LMOf2365_0225 234 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 46906882 Common - methyltransferase, UbiE/COQ5 family LMOf2365_0666 165 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46906256 Common - hypothetical protein LMOf2365_0034 2 None None None 46908171 Common rpsA 30S ribosomal protein S1 LMOf2365_1967 230 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 46907731 Common - hypothetical protein LMOf2365_1522 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 46906771 Common - transcriptional regulator, MerR family LMOf2365_0555 105 COG0789 SoxR, Predicted transcriptional regulators Transcription 46906472 Common cysS cysteinyl-tRNA synthetase LMOf2365_0251 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46906411 Common - sugar ABC transporter, permease protein LMOf2365_0190 156 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 46906715 Pathogen - cell wall surface anchor family protein LMOf2365_0498 1 None None None 46908690 Common - transcriptional regulator, putative LMOf2365_2491 63 COG1316 LytR, Transcriptional regulator Transcription 46906975 Common - hypothetical protein LMOf2365_0760 6 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 46908709 Common - UDP-N-acetylglucosamine 2-epimerase LMOf2365_2510 154 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 46908465 Common - cation efflux family protein LMOf2365_2264 215 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 46907901 Common - hypothetical protein LMOf2365_1694 186 COG0759 COG0759, Uncharacterized conserved protein Function unknown 46906586 Common tpiA-1 triosephosphate isomerase LMOf2365_0366 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 46907606 Common - sensor histidine kinase LMOf2365_1397 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 46908632 Common gap glyceraldehyde-3-phosphate dehydrogenase LMOf2365_2432 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 46908953 Common - ROK family protein LMOf2365_2754 131 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46908431 Common - hypothetical protein LMOf2365_2230 1 None None None 46907750 Common dtd D-tyrosyl-tRNA deacylase LMOf2365_1541 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 46907761 Common ruvA holliday junction DNA helicase RuvA LMOf2365_1552 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 46908010 Common pepT peptidase T LMOf2365_1805 62 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 46906293 Common - hypothetical protein LMOf2365_0071 7 COG4499 COG4499, Predicted membrane protein Function unknown 46908473 Common - hypothetical protein LMOf2365_2272 1 None None None 46907428 Common - ATP:cob(I)alamin adenosyltransferase, putative LMOf2365_1218 128 COG2096 COG2096, Uncharacterized conserved protein Function unknown 46907965 Common gltC transcriptional regulator GltC LMOf2365_1759 192 COG0583 LysR, Transcriptional regulator Transcription 46908797 Common rplP 50S ribosomal protein L16 LMOf2365_2598 218 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 46906788 Common srlE PTS system, glucitol/sorbitol-specific, IIBC component LMOf2365_0572 22 COG3732 SrlE, Phosphotransferase system sorbitol-specific component IIBC Carbohydrate transport and metabolism 46907560 Common - hypothetical protein LMOf2365_1351 1 None None None 46907246 Common - glycine betaine/L-proline ABC transporter, ATP-binding protein LMOf2365_1035 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 46907141 Common gor glutathione reductase LMOf2365_0928 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 46908278 Common mraZ hypothetical protein LMOf2365_2074 135 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 46908243 Pathogen - hypothetical protein LMOf2365_2039 1 None None None 46906648 Common - phosphoenolpyruvate synthase LMOf2365_0430 164 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 46907816 Common - peptidase, U7 family LMOf2365_1607 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 46907454 Common - aspartate kinase LMOf2365_1244 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 46906778 Common - hypothetical protein LMOf2365_0562 38 COG3830 COG3830, ACT domain-containing protein Signal transduction mechanisms 46908914 Common - transcriptional regulator, MerR family LMOf2365_2715 130 COG0789 SoxR, Predicted transcriptional regulators Transcription 46906994 Common - lipase/acylhydrolase, putative LMOf2365_0779 25 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 46907693 Common - hypothetical protein LMOf2365_1484 206 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 46907932 Common - hypothetical protein LMOf2365_1725 1 None None None 46907919 Common - enoyl-(acyl carrier protein) reductase LMOf2365_1712 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46908061 Common - fibronectin/fibrinogen binding protein, putative LMOf2365_1857 86 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 46906230 Common gyrB DNA gyrase, B subunit LMOf2365_0006 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 46907822 Common argC N-acetyl-gamma-glutamyl-phosphate reductase LMOf2365_1613 217 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 46908902 Pathogen - hypothetical protein LMOf2365_2703 1 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 46908478 Common - glyoxalase family protein LMOf2365_2278 11 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46908029 Common rpsP 30S ribosomal protein S16 LMOf2365_1824 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 46907185 Common - lipoprotein, putative LMOf2365_0973 1 None None None 46907783 Common hemL glutamate-1-semialdehyde aminotransferase LMOf2365_1574 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 46906398 Common holB DNA polymerase III subunit delta' LMOf2365_0177 216 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 46907999 Common purL phosphoribosylformylglycinamidine synthase II LMOf2365_1794 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 46906723 Common - hypothetical protein LMOf2365_0506 2 None None None 46907213 Common - ABC transporter, permease protein LMOf2365_1001 38 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 46907022 Common - hypothetical protein LMOf2365_0808 1 None None None 46907796 Common polA DNA polymerase I LMOf2365_1587 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 46906840 Common - O-acetylhomoserine (thiol)-lyase LMOf2365_0624 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 46907149 Common - PTS system, cellobiose-specific, IIB component LMOf2365_0936 16 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46908366 Common - hypothetical protein LMOf2365_2164 58 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 46908521 Common - FMN reductase, NADPH-dependent LMOf2365_2321 37 COG0431 COG0431, Predicted flavoprotein General function prediction only 46907137 Common - OsmC/Ohr family protein LMOf2365_0924 4 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 46907179 Common - transporter, putative LMOf2365_0967 77 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 46909015 Common - major facilitator family transporter LMOf2365_2817 178 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907098 Common - ATP-dependent RNA helicase DeaD LMOf2365_0884 243 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 46907130 Common - S1 RNA binding domain protein LMOf2365_0917 144 COG2183 Tex, Transcriptional accessory protein Transcription 46907728 Common - DedA family protein LMOf2365_1519 184 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 46906479 Common nusG transcription antitermination protein NusG LMOf2365_0258 215 COG0250 NusG, Transcription antiterminator Transcription 46906791 Common - hypothetical protein LMOf2365_0575 37 COG4091 COG4091, Predicted homoserine dehydrogenase Amino acid transport and metabolism 46908104 Common - phosphoglucomutase/phosphomannomutase family protein LMOf2365_1901 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 46908131 Common - hypothetical protein LMOf2365_1927 8 COG5353 COG5353, Uncharacterized protein conserved in bacteria Function unknown 46908351 Common - ABC transporter, permease protein LMOf2365_2148 17 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 46906944 Common - flagellar motor switch protein LMOf2365_0729 57 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 46908641 Common - amino acid permease family protein LMOf2365_2442 195 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 46906701 Common - hypothetical protein LMOf2365_0484 1 None None None 46908035 Common smC chromosome segregation SMC protein LMOf2365_1831 223 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 46907548 Common nusA transcription elongation factor NusA LMOf2365_1339 223 COG0195 NusA, Transcription elongation factor Transcription 46907939 Common - aminoglycoside N3-acetyltransferase LMOf2365_1732 24 COG2746 COG2746, Aminoglycoside N3'-acetyltransferase Defense mechanisms 46906783 Common - carboxypeptidase, putative LMOf2365_0567 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 46908667 Common - phosphate ABC transporter, ATP-binding protein LMOf2365_2468 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 46907804 Common accD acetyl-CoA carboxylase subunit beta LMOf2365_1595 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 46906961 Common flgB flagellar basal body rod protein FlgB LMOf2365_0746 49 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 46908230 Common - transcriptional regulator, GntR family LMOf2365_2026 89 COG2188 PhnF, Transcriptional regulators Transcription 46908022 Common - metallo-beta-lactamase family protein LMOf2365_1817 157 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 46908116 Common pbuX xanthine permease LMOf2365_1913 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 46906551 Common - peptidase, M48 family LMOf2365_0331 29 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 46907103 Common - hypothetical protein LMOf2365_0889 5 COG4367 COG4367, Uncharacterized protein conserved in bacteria Function unknown 46907258 Common - transcriptional regulator, putative LMOf2365_1047 63 COG1316 LytR, Transcriptional regulator Transcription 46909000 Common trmE tRNA modification GTPase TrmE LMOf2365_2802 223 COG0486 ThdF, Predicted GTPase General function prediction only 46907910 Common - cystathionine beta-lyase LMOf2365_1703 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 46907662 Common - metallo-beta-lactamase family protein LMOf2365_1453 157 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 46906936 Common motA flagellar motor protein MotA LMOf2365_0721 115 COG1291 MotA, Flagellar motor component Cell motility and secretion 46908126 Common - hypothetical protein LMOf2365_1922 2 None None None 46907944 Pathogen - hypothetical protein LMOf2365_1737 1 None None None 46908298 Common - hypothetical protein LMOf2365_2094 1 None None None 46907464 Common - hypothetical protein LMOf2365_1255 28 COG5361 COG5361, Uncharacterized conserved protein Function unknown 46907317 Common - nicotinate phosphoribosyltransferase LMOf2365_1106 113 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 46908356 Common - conserved hypothetical protein TIGR00159 LMOf2365_2153 68 COG1624 COG1624, Uncharacterized conserved protein Function unknown 46907062 Common - hypothetical protein LMOf2365_0848 149 COG0679 COG0679, Predicted permeases General function prediction only 46908504 Common - DNA-binding protein LMOf2365_2304 20 COG1396 HipB, Predicted transcriptional regulators Transcription 46906390 Common zurA-1 zinc ABC transporter, ATP-binding protein LMOf2365_0169 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 46906849 Common - hypothetical protein LMOf2365_0633 4 None None None 46908419 Common - hypothetical protein LMOf2365_2218 4 COG5386 COG5386, Cell surface protein Cell envelope biogenesis, outer membrane 46907332 Common - glyoxalase family protein LMOf2365_1121 3 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 46907612 Common - hypothetical protein LMOf2365_1403 111 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 46908155 Common - TPR domain protein LMOf2365_1951 41 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 46907046 Common - hypothetical protein LMOf2365_0832 1 None None None 46907886 Common tsf elongation factor Ts LMOf2365_1678 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 46907493 Common tig trigger factor LMOf2365_1284 208 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 46906803 Common - hypothetical protein LMOf2365_0587 62 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 46908585 Common sufD FeS assembly protein SufD LMOf2365_2385 182 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 46906942 Common cheY chemotaxis protein CheY LMOf2365_0727 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 46908288 Common - methyltransferase, putative LMOf2365_2084 217 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 46906652 Common - polysaccharide deacetylase family protein LMOf2365_0434 113 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 46906659 Common - PRD/PTS system IIA 2 domain protein LMOf2365_0441 35 COG3711 BglG, Transcriptional antiterminator Transcription 46907222 Common - MATE efflux family protein LMOf2365_1011 106 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 46907906 Common menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase LMOf2365_1699 110 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 46907124 Common - sigma factor B regulator protein LMOf2365_0911 102 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 46906347 Common - ABC transporter, ATP-binding/permease protein LMOf2365_0125 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46907959 Common bglX-1 beta-glucosidase LMOf2365_1753 119 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 46908152 Common - hypothetical protein LMOf2365_1948 41 COG2738 COG2738, Predicted Zn-dependent protease General function prediction only 46907449 Common - CvpA family protein LMOf2365_1239 12 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 46908973 Common - PTS system, beta-glucoside-specific, IIC component LMOf2365_2774 40 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46906622 Common - hypothetical protein LMOf2365_0403 1 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 46907173 Common - hypothetical protein LMOf2365_0961 8 None None None 46906558 Pathogen - cell wall surface anchor family protein LMOf2365_0338 1 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 46907751 Common relA GTP pyrophosphokinase LMOf2365_1542 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 46908188 Common deoB phosphopentomutase LMOf2365_1984 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 46907641 Common - cell wall surface anchor family protein LMOf2365_1432 6 None None None 46906229 Common recF recombination protein F LMOf2365_0005 167 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 46906357 Common lmaB antigen B LMOf2365_0135 1 None None None 46909035 Common rhaD rhamnulose-1-phosphate aldolase LMOf2365_2837 31 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 46907402 Common - hypothetical protein LMOf2365_1192 36 COG4869 PduL, Propanediol utilization protein Secondary metabolites biosynthesis, transport, and catabolism 46907395 Common eutB ethanolamine ammonia-lyase heavy chain LMOf2365_1185 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 46908823 Pathogen - hypothetical protein LMOf2365_2624 1 None None None 46906606 Common - transcriptional regulator, GntR family LMOf2365_0387 105 COG2188 PhnF, Transcriptional regulators Transcription 46907635 Common pflA pyruvate formate-lyase activating enzyme LMOf2365_1426 94 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 46907389 Pathogen - hypothetical protein LMOf2365_1179 1 None None None 46906968 Common - transglycosylase, SLT family LMOf2365_0753 171 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 46907889 Common murQ N-acetylmuramic acid-6-phosphate etherase LMOf2365_1682 85 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 46909041 Common - RNA-binding protein LMOf2365_2843 71 COG1847 Jag, Predicted RNA-binding protein General function prediction only 46908596 Common gcvH glycine cleavage system H protein LMOf2365_2396 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 46907091 Common - sugar ABC transporter, permease protein LMOf2365_0877 174 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 46908639 Common - chitin-binding protein/carbohydrate-binding protein LMOf2365_2440 61 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 46908291 Common - hypothetical protein LMOf2365_2087 65 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 46908008 Common - ABC transporter, ATP-binding protein LMOf2365_1803 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 46907285 Common pdhB pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit LMOf2365_1074 200 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 46908468 Common - IolI protein, putative LMOf2365_2267 27 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 46908607 Common licT transcription antiterminator LicT LMOf2365_2407 29 COG3711 BglG, Transcriptional antiterminator Transcription 46908218 Common ilvA threonine dehydratase LMOf2365_2014 206 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 46906423 Common - hypothetical protein LMOf2365_0202 46 COG3394 COG3394, Uncharacterized protein conserved in bacteria Function unknown 46906912 Common thiD-2 phosphomethylpyrimidine kinase LMOf2365_0696 222 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 46907005 Common - transcriptional regulator, GntR family LMOf2365_0790 83 COG1802 GntR, Transcriptional regulators Transcription 46908909 Common - acetyltransferase, GNAT family LMOf2365_2710 18 COG3393 COG3393, Predicted acetyltransferase General function prediction only 46908834 Common rpsL 30S ribosomal protein S12 LMOf2365_2635 243 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 46906880 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 LMOf2365_0664 81 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 46908006 Common - hypothetical protein LMOf2365_1801 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 46908700 Common atpC ATP synthase F1, epsilon subunit LMOf2365_2501 168 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 46908926 Common - hypothetical protein LMOf2365_2727 12 None None None 46908940 Common - glycosyl transferase, group 2 family protein LMOf2365_2741 133 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 46908815 Common - hypothetical protein LMOf2365_2616 3 None None None 46908878 Common - MutT/nudix family protein LMOf2365_2679 9 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 46906243 Common - hypothetical protein LMOf2365_0020 74 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 46908997 Common - hypothetical protein LMOf2365_2798 4 COG4823 AbiF, Abortive infection bacteriophage resistance protein Defense mechanisms 46907461 Pathogen - hypothetical protein LMOf2365_1252 1 None None None 46908490 Pathogen - hypothetical protein LMOf2365_2290 1 None None None 46906962 Common flgC flagellar basal body rod protein FlgC LMOf2365_0747 112 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 46906635 Common - ABC transporter, ATP-binding protein LMOf2365_0416 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46908579 Common - hypothetical protein LMOf2365_2379 18 COG4272 COG4272, Predicted membrane protein Function unknown 46908650 Common trxB thioredoxin-disulfide reductase LMOf2365_2451 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 46906988 Common - ABC transporter, permease protein, putative LMOf2365_0773 1 None None None 46907762 Common ldh-2 L-lactate dehydrogenase LMOf2365_1553 148 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 46907489 Common - DNA-binding protein LMOf2365_1280 2 None None None 46906452 Common ftsH ATP-dependent metalloprotease FtsH LMOf2365_0231 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 46907894 Common asnB asparagine synthase (glutamine-hydrolyzing) LMOf2365_1687 169 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 46907245 Common - mechanosensitive ion channel family protein LMOf2365_1034 224 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 46908239 Common - sensor histidine kinase LMOf2365_2035 108 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 46908225 Common - hypothetical protein LMOf2365_2021 16 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 46908739 Common - hypothetical protein LMOf2365_2540 1 None None None 46906939 Common - glycosyl transferase, group 2 family protein LMOf2365_0724 107 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 46907369 Common pduA propanediol utilization protein PduA LMOf2365_1159 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46907287 Common - dihydrolipoamide dehydrogenase LMOf2365_1076 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 46908273 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase LMOf2365_2069 226 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 46908312 Common rimI ribosomal-protein-alanine acetyltransferase LMOf2365_2108 190 COG0456 RimI, Acetyltransferases General function prediction only 46908021 Common - flavodoxin-like fold domain protein LMOf2365_1816 49 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 46906908 Common - cell wall surface anchor family protein LMOf2365_0693 8 None None None 46907315 Common - teichoic acid biosynthesis protein B, putative LMOf2365_1104 34 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 46906273 Common - DedA family protein LMOf2365_0051 173 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 46906388 Common - bacterial extracellular solute-binding protein, family 5 LMOf2365_0167 172 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 46906281 Common agrC accessory gene regulator protein C LMOf2365_0059 38 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 46906671 Common - hypothetical protein LMOf2365_0453 1 None None None 46906980 Common - hypothetical protein LMOf2365_0765 8 None None None 46907624 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase LMOf2365_1415 205 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 46907123 Common rsbT anti-sigma B factor RsbT LMOf2365_0910 36 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 46908327 Common - glycine betaine transporter LMOf2365_2124 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 46908768 Common rpsI 30S ribosomal protein S9 LMOf2365_2569 248 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 46908170 Common engA GTP-binding protein EngA LMOf2365_1966 221 COG1160 COG1160, Predicted GTPases General function prediction only 46908112 Common rnhA ribonuclease HI LMOf2365_1909 7 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 46907266 Common glpK-1 glycerol kinase LMOf2365_1055 175 COG0554 GlpK, Glycerol kinase Energy production and conversion 46906665 Common - acetyltransferase, CysE/LacA/LpxA/NodL family LMOf2365_0447 188 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 46908263 Common - transcriptional regulator, TetR family LMOf2365_2059 6 COG1309 AcrR, Transcriptional regulator Transcription 46907871 Common - STAS domain protein LMOf2365_1663 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46908995 Common - hypothetical protein LMOf2365_2796 2 None None None 46906823 Common - hypothetical protein LMOf2365_0607 35 COG2966 COG2966, Uncharacterized conserved protein Function unknown 46908082 Common - transcriptional regulator, MarR family LMOf2365_1878 44 COG1846 MarR, Transcriptional regulators Transcription 46907701 Common dnaK chaperone protein DnaK LMOf2365_1492 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 46906969 Common - hypothetical protein LMOf2365_0754 1 None None None 46907699 Common prmA ribosomal protein L11 methyltransferase LMOf2365_1490 179 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 46907749 Common ami N-acetylmuramoyl-L-alanine amidase, family 3 LMOf2365_1540 186 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 46907617 Common - ABC transporter, ATP-binding protein LMOf2365_1408 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 46908935 Common - glutamine amidotransferase, class I LMOf2365_2736 240 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 46906602 Common - hypothetical protein LMOf2365_0383 43 COG2378 COG2378, Predicted transcriptional regulator Transcription 46908319 Common - hypothetical protein LMOf2365_2115 24 COG4832 COG4832, Uncharacterized conserved protein Function unknown 46906614 Common mmsA methylmalonate-semialdehyde dehydrogenase LMOf2365_0395 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 46906857 Common - transcriptional regulator, MarR family LMOf2365_0641 31 COG1846 MarR, Transcriptional regulators Transcription 46908987 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_2788 186 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46906480 Common - hypothetical protein LMOf2365_0259 1 None None None 46906544 Pathogen - hypothetical protein LMOf2365_0323 1 None None None 46907480 Common treC-2 trehalose-6-phosphate hydrolase LMOf2365_1271 159 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46907498 Common - signal peptidase I LMOf2365_1289 184 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 46907437 Common - RNA methyltransferase, TrmH family LMOf2365_1227 214 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 46906950 Common fliM flagellar motor switch protein FliM LMOf2365_0735 84 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 46907512 Common - CoA-binding domain protein LMOf2365_1303 130 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 46907429 Common - hypothetical protein LMOf2365_1219 65 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 46908125 Common - penicillin-binding protein LMOf2365_1921 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 46907050 Common - hypothetical protein LMOf2365_0836 56 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 46906801 Common - phosphoglycerate mutase family protein LMOf2365_0585 107 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46908591 Common - hypothetical protein LMOf2365_2391 1 None None None 46908493 Common - acetyltransferase, GNAT family LMOf2365_2293 14 COG3153 COG3153, Predicted acetyltransferase General function prediction only 46906466 Common radA DNA repair protein RadA LMOf2365_0245 216 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 46906523 Common - hydrolase, carbon-nitrogen family LMOf2365_0302 209 COG0388 COG0388, Predicted amidohydrolase General function prediction only 46906724 Common - hypothetical protein LMOf2365_0507 14 COG1309 AcrR, Transcriptional regulator Transcription 46908870 Common - hypothetical protein LMOf2365_2671 20 COG3870 COG3870, Uncharacterized protein conserved in bacteria Function unknown 46907473 Common - transporter, putative LMOf2365_1264 157 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908341 Common - hypothetical protein LMOf2365_2138 3 None None None 46908349 Common - putative heme peroxidase LMOf2365_2146 36 COG3253 COG3253, Uncharacterized conserved protein Function unknown 46906528 Common - DNA-binding response regulator LMOf2365_0307 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46906314 Common - transferase, putative LMOf2365_0092 108 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 46908040 Common fabD acyl-carrier-protein S-malonyltransferase LMOf2365_1836 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 46908529 Common - Cof-like hydrolase LMOf2365_2329 73 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46907665 Common asd aspartate-semialdehyde dehydrogenase LMOf2365_1456 235 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 46906932 Common - flagellar biosynthesis regulator FlhF LMOf2365_0717 247 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 46906690 Common - hypothetical protein LMOf2365_0473 45 COG1959 COG1959, Predicted transcriptional regulator Transcription 46907240 Common - hypothetical protein LMOf2365_1029 6 COG4703 COG4703, Uncharacterized protein conserved in bacteria Function unknown 46908256 Pathogen - cell wall surface anchor family protein LMOf2365_2052 1 None None None 46909034 Common - hypothetical protein LMOf2365_2836 42 COG3254 COG3254, Uncharacterized conserved protein Function unknown 46908357 Common - glycosyl transferase, family 65 LMOf2365_2155 50 COG1554 ATH1, Trehalose and maltose hydrolases (possible phosphorylases) Carbohydrate transport and metabolism 46907564 Common - hypothetical protein LMOf2365_1355 8 COG4483 COG4483, Uncharacterized protein conserved in bacteria Function unknown 46909031 Common - hypothetical protein LMOf2365_2833 12 None None None 46906697 Common - transcriptional regulator, putative LMOf2365_0480 63 COG1316 LytR, Transcriptional regulator Transcription 46908984 Common - PTS system, IIA component LMOf2365_2785 49 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46908320 Common - cell wall surface anchor family protein LMOf2365_2117 28 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46906448 Common - S4 domain protein LMOf2365_0227 52 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 46907510 Common - aldose epimerase family protein LMOf2365_1301 44 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 46907270 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A LMOf2365_1059 27 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 46906925 Common - hypothetical protein LMOf2365_0710 3 None None None 46907986 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C LMOf2365_1781 179 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 46907009 Common - ROK family protein LMOf2365_0794 138 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46907581 Common efp elongation factor P LMOf2365_1372 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 46908923 Common - transcriptional regulator, LacI family LMOf2365_2724 129 COG1609 PurR, Transcriptional regulators Transcription 46906838 Common - formate/nitrite transporter family protein LMOf2365_0622 59 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 46907532 Common tkt-2 transketolase LMOf2365_1323 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 46908105 Common - hypothetical protein LMOf2365_1902 56 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46908332 Common - PTS system galactitol-specific enzyme IIB component LMOf2365_2129 17 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 46908965 Common - bacteriocin immunity protein, putative LMOf2365_2766 7 COG4652 COG4652, Uncharacterized protein conserved in bacteria Function unknown 46906572 Common - hypothetical protein LMOf2365_0352 1 None None None 46907907 Common - menaquinone-specific isochorismate synthase LMOf2365_1700 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 46908518 Common - amino acid ABC transporter, permease protein LMOf2365_2318 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 46908889 Common - hypothetical protein LMOf2365_2690 1 None None None 46906819 Common - glycosyl hydrolase, family 1 LMOf2365_0603 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46908544 Common - PTS system, cellobiose-specific, IIB component LMOf2365_2344 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46908862 Common - PTS system, beta-glucoside-specific, IIB component LMOf2365_2663 29 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46907214 Common - drug resistance transporter, EmrB/QacA family LMOf2365_1002 200 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908305 Pathogen - hypothetical protein LMOf2365_2101 1 None None None 46906704 Common - magnesium chelatase, subunit ChII family protein LMOf2365_0487 173 COG0714 COG0714, MoxR-like ATPases General function prediction only 46906343 Common - nitroreductase family protein LMOf2365_0121 105 COG0778 NfnB, Nitroreductase Energy production and conversion 46907899 Common - hypothetical protein LMOf2365_1692 3 None None None 46907163 Common - sortase family protein LMOf2365_0950 12 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 46906264 Common - glycosyl hydrolase, family 9 LMOf2365_0042 6 None None None 46908712 Common - low molecular weight phosphotyrosine protein phosphatase family protein LMOf2365_2513 122 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 46907970 Common - amino acid ABC transporter, permease protein LMOf2365_1764 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 46908533 Common - amino acid antiporter LMOf2365_2333 136 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 46908659 Common - hypothetical protein LMOf2365_2460 9 COG3595 COG3595, Uncharacterized conserved protein Function unknown 46908777 Common rplQ 50S ribosomal protein L17 LMOf2365_2578 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 46908747 Common - cation efflux family protein LMOf2365_2548 208 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 46908028 Common - hypothetical protein LMOf2365_1823 68 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 46907846 Common trmB tRNA (guanine-N(7))-methyltransferase LMOf2365_1637 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 46906538 Common - hypothetical protein LMOf2365_0317 2 None None None 46908740 Common - hypothetical protein LMOf2365_2541 1 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 46908147 Common - EAL domain protein LMOf2365_1943 158 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 46908858 Common kdpD sensor histidine kinase KdpD LMOf2365_2659 219 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 46907432 Common - transcriptional regulator, PadR family LMOf2365_1222 26 COG1695 COG1695, Predicted transcriptional regulators Transcription 46906745 Common - transaldolase, putative LMOf2365_0529 98 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 46907162 Common - DNA-3-methyladenine glycosylase, putative LMOf2365_0949 83 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 46906922 Pathogen - hypothetical protein LMOf2365_0707 1 None None None 46908511 Common - carbohydrate kinase, PfkB family LMOf2365_2311 132 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 46907279 Common moaA molybdenum cofactor biosynthesis protein A LMOf2365_1068 209 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 46908619 Common - glycosyl hydrolase, family 31 LMOf2365_2419 85 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 46907644 Common - transporter, putative LMOf2365_1435 7 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 46906493 Pathogen - hypothetical protein LMOf2365_0272 1 None None None 46908212 Common ilvN acetolactate synthase, small subunit LMOf2365_2008 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 46907263 Common - hypothetical protein LMOf2365_1052 16 COG2407 FucI, L-fucose isomerase and related proteins Carbohydrate transport and metabolism 46907558 Common - conserved hypothetical protein TIGR00157 LMOf2365_1349 163 COG1162 COG1162, Predicted GTPases General function prediction only 46906752 Common - PTS system, galactitol-specific, IIB component, putative LMOf2365_0536 5 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 46908674 Common - hypothetical protein LMOf2365_2475 13 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 46908000 Common purQ phosphoribosylformylglycinamidine synthase subunit I LMOf2365_1795 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 46906959 Common - flagellar protein FliS, putative LMOf2365_0744 8 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 46907674 Common zurM-2 zinc ABC transporter, permease protein LMOf2365_1465 194 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 46908653 Common - pyrophosphatase PpaX LMOf2365_2454 189 COG0546 Gph, Predicted phosphatases General function prediction only 46907550 Common - ribosomal protein L7A family LMOf2365_1341 25 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 46908411 Common - cell wall surface anchor family protein LMOf2365_2210 18 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46906533 Common - serine protease LMOf2365_0312 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 46907769 Common - hypothetical protein LMOf2365_1560 20 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 46908601 Common - iron compound ABC transporter, permease protein LMOf2365_2401 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 46908064 Common pyrF orotidine 5'-phosphate decarboxylase LMOf2365_1860 165 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 46908569 Pathogen - hypothetical protein LMOf2365_2369 1 None None None 46906415 Common - alpha-glucosidase LMOf2365_0194 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 46908724 Common - hypothetical protein LMOf2365_2525 35 COG0392 COG0392, Predicted integral membrane protein Function unknown 46908228 Common - PTS system, IIC component LMOf2365_2024 39 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 46906655 Common - hypothetical protein LMOf2365_0437 2 None None None 46907924 Common recX recombination regulator RecX LMOf2365_1717 44 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 46907774 Common mreD cell shape-determining protein MreD LMOf2365_1565 9 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 46907415 Common cbiT cobalt-precorrin-6Y C(15)-methyltransferase LMOf2365_1205 125 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 46906550 Common - threonine aldolase family protein LMOf2365_0330 74 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 46907401 Common - hypothetical protein LMOf2365_1191 12 COG4812 EutT, Ethanolamine utilization cobalamin adenosyltransferase Amino acid transport and metabolism 46907155 Common - ABC transporter, permease protein, putative LMOf2365_0942 87 COG0701 COG0701, Predicted permeases General function prediction only 46906239 Common qoxA quinol oxidase AA3, subunit II LMOf2365_0016 129 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 46907502 Common topA DNA topoisomerase I LMOf2365_1293 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 46906486 Common - hypothetical protein LMOf2365_0265 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 46906596 Common - fumarate reductase flavoprotein subunit LMOf2365_0376 227 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 46906848 Common - hypothetical protein LMOf2365_0632 1 None None None 46906796 Common - hypothetical protein LMOf2365_0580 6 None None None 46907915 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein LMOf2365_1708 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 46907308 Common - glycosyl transferase, group 2 family protein LMOf2365_1097 187 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 46907964 Common gltB glutamate synthase, large subunit LMOf2365_1758 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 46907594 Common recN DNA repair protein RecN LMOf2365_1385 222 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 46907779 Common - type IV leader peptidase family protein LMOf2365_1570 27 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 46906812 Common hisD histidinol dehydrogenase LMOf2365_0596 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 46908402 Pathogen - hypothetical protein LMOf2365_2201 1 None None None 46906691 Common - YtfG protein, putative LMOf2365_0474 68 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 46908049 Common - kinase, putative LMOf2365_1845 49 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 46908770 Common truA tRNA pseudouridine synthase A LMOf2365_2571 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 46907945 Common - cell shape-determining protein LMOf2365_1738 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 46907654 Common opuCC glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein LMOf2365_1445 85 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 46908553 Common - putative monovalent cation/H+ antiporter subunit C LMOf2365_2353 91 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 46906364 Common - hypothetical protein LMOf2365_0142 1 None None None 46907010 Common - hypothetical protein LMOf2365_0795 1 None None None 46906889 Common - transaldolase, putative LMOf2365_0674 99 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 46907707 Common lepA GTP-binding protein LepA LMOf2365_1498 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 46906624 Common - hypothetical protein LMOf2365_0405 1 None None None 46906417 Common - deoxyribonuclease, TatD family LMOf2365_0196 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 46908951 Common - PTS system, cellobiose-specific, IIB component LMOf2365_2752 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46906254 Common - hypothetical protein LMOf2365_0031 66 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 46907994 Common purD phosphoribosylamine--glycine ligase LMOf2365_1789 232 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 46908009 Common - hypothetical protein LMOf2365_1804 1 None None None 46906345 Common chiB chitinase B LMOf2365_0123 51 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 46908454 Common - HD domain protein LMOf2365_2253 46 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 46908818 Common - creatinine amidohydrolase, putative LMOf2365_2619 86 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 46907645 Common - transporter, putative LMOf2365_1436 76 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 46908836 Common - acetyltransferase, GNAT family LMOf2365_2637 76 COG0456 RimI, Acetyltransferases General function prediction only 46906890 Common - sulfatase family protein LMOf2365_0675 72 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 46906565 Common - leucine rich repeat domain/ LPXTG-motif cell wall anchor domain protein LMOf2365_0345 45 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906359 Common - hypothetical protein LMOf2365_0137 3 None None None 46908809 Common - lipoprotein, putative LMOf2365_2610 10 COG4939 COG4939, Major membrane immunogen, membrane-anchored lipoprotein Function unknown 46908175 Common - ATP-dependent DNA helicase RecQ, putative LMOf2365_1971 237 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 46907785 Common hemD uroporphyrinogen-III synthase LMOf2365_1576 63 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 46906262 Common - transcriptional regulator, LacI family LMOf2365_0040 127 COG1609 PurR, Transcriptional regulators Transcription 46906650 Common - hypothetical protein LMOf2365_0432 1 None None None 46907006 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_0791 169 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 46907406 Common - hypothetical protein LMOf2365_1196 18 COG3192 EutH, Ethanolamine utilization protein Amino acid transport and metabolism 46906897 Common - transcriptional regulator, GntR family LMOf2365_0682 78 COG1802 GntR, Transcriptional regulators Transcription 46906589 Common - hypothetical protein LMOf2365_0369 3 None None None 46907219 Common - ABC transporter, ATP-binding protein LMOf2365_1007 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908942 Common - hydrolase, CocE/NonD family LMOf2365_2743 67 COG2936 COG2936, Predicted acyl esterases General function prediction only 46907012 Common - hypothetical protein LMOf2365_0797 16 COG4811 COG4811, Predicted membrane protein Function unknown 46906249 Common - PTS system, mannose-specific, IIC component, putative LMOf2365_0026 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 46909043 Common rnpA ribonuclease P LMOf2365_2845 82 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 46907861 Common trpD anthranilate phosphoribosyltransferase LMOf2365_1653 220 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 46906580 Pathogen - hypothetical protein LMOf2365_0360 1 None None None 46908182 Common resD DNA-binding response regulator ResD LMOf2365_1978 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46907726 Common - O-methyltransferase family protein LMOf2365_1517 101 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 46906504 Common inlE internalin E LMOf2365_0283 49 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908572 Common - hypothetical protein LMOf2365_2372 15 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 46907578 Common - hypothetical protein LMOf2365_1369 1 None None None 46908463 Common - penicillin-binding protein LMOf2365_2262 203 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 46908798 Common rpsC 30S ribosomal protein S3 LMOf2365_2599 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 46908974 Common - PRD domain protein LMOf2365_2775 50 COG3711 BglG, Transcriptional antiterminator Transcription 46906425 Common - hypothetical protein LMOf2365_0204 125 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 46908424 Common - adaptor protein LMOf2365_2223 14 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 46906616 Common - IolC protein, putative LMOf2365_0397 189 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 46907075 Common - endoribonuclease L-PSP, putative LMOf2365_0861 182 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 46908663 Common - HD domain protein LMOf2365_2464 29 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 46907466 Common - hypothetical protein LMOf2365_1257 72 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 46908751 Common - ABC transporter, ATP-binding protein LMOf2365_2552 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46908459 Common fumC fumarate hydratase LMOf2365_2258 229 COG0114 FumC, Fumarase Energy production and conversion 46908019 Common rplS 50S ribosomal protein L19 LMOf2365_1814 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 46906764 Common - drug resistance transporter, EmrB/QacA family LMOf2365_0548 182 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907118 Common acpS holo-(acyl-carrier-protein) synthase LMOf2365_0904 160 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 46908195 Common - pyridine nucleotide-disulfide oxidoreductase family protein LMOf2365_1991 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 46908033 Common - hypothetical protein LMOf2365_1829 28 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 46906369 Common - N-acetylmuramoyl-L-alanine amidase, family 3 LMOf2365_0147 175 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 46907905 Common - hydrolase, alpha/beta fold family LMOf2365_1698 199 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 46908158 Common hisC histidinol-phosphate aminotransferase LMOf2365_1954 233 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 46908360 Common - maltose/maltodextrin ABC transporter, permease protein LMOf2365_2158 148 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 46908897 Common cydA cytochrome d ubiquinol oxidase, subunit I LMOf2365_2698 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 46908702 Common atpG F0F1 ATP synthase subunit gamma LMOf2365_2503 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 46907064 Common - transcriptional activator, putative LMOf2365_0850 7 None None None 46907105 Common - major facilitator family transporter LMOf2365_0891 185 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46906937 Common motB chemotaxis protein MotB LMOf2365_0722 133 COG1360 MotB, Flagellar motor protein Cell motility and secretion 46906470 Common gltX glutamyl-tRNA synthetase LMOf2365_0249 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 46907884 Common - hypothetical protein LMOf2365_1676 11 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 46908052 Common - protein kinase, putative LMOf2365_1848 157 COG2815 COG2815, Uncharacterized protein conserved in bacteria Function unknown 46908721 Common gtcA cell wall teichoic acid glycosylation protein GtcA LMOf2365_2522 19 COG2246 COG2246, Predicted membrane protein Function unknown 46906973 Common - pyruvate oxidase LMOf2365_0758 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 46907858 Common trpB tryptophan synthase subunit beta LMOf2365_1650 225 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 46907129 Common - sulfate permease family protein LMOf2365_0916 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 46908502 Common yhzC YhzC protein LMOf2365_2302 1 COG5582 COG5582, Uncharacterized conserved protein Function unknown 46908392 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_2191 189 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46907614 Common - FtsK/SpoIIIE family protein LMOf2365_1405 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 46908153 Common - hypothetical protein LMOf2365_1949 16 COG4347 COG4347, Predicted membrane protein Function unknown 46908562 Common - hypothetical protein LMOf2365_2362 9 COG3878 COG3878, Uncharacterized protein conserved in bacteria Function unknown 46907534 Common - hypothetical protein LMOf2365_1325 67 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 46906625 Common - NLP/P60 family protein LMOf2365_0406 129 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 46908580 Common - hypothetical protein LMOf2365_2380 95 COG1801 COG1801, Uncharacterized conserved protein Function unknown 46907112 Common - hypothetical protein LMOf2365_0898 34 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 46908095 Common - DegV family protein LMOf2365_1892 51 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 46908200 Common - hypothetical protein LMOf2365_1996 9 COG4915 XpaC, 5-bromo-4-chloroindolyl phosphate hydrolysis protein General function prediction only 46908949 Pathogen - hypothetical protein LMOf2365_2750 1 None None None 46907058 Common - hydroxymethylglutaryl-CoA reductase, degradative LMOf2365_0844 35 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 46907562 Common - 5-formyltetrahydrofolate cyclo-ligase family protein LMOf2365_1353 144 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 46908295 Common - MOSC domain protein LMOf2365_2091 78 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 46908761 Pathogen - hypothetical protein LMOf2365_2562 1 None None None 46908201 Common - tellurite resistance protein, putative LMOf2365_1997 31 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 46907349 Common - hypothetical protein LMOf2365_1139 2 COG1359 COG1359, Uncharacterized conserved protein Function unknown 46908845 Common - PTS system, galactitol-specific, IIB component, putative LMOf2365_2646 19 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 46907048 Pathogen - hypothetical protein LMOf2365_0834 1 None None None 46908307 Common - hypothetical protein LMOf2365_2103 1 None None None 46908376 Common - mannose-6-phosphate isomerase, class I, putative LMOf2365_2175 40 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 46906657 Common - Cof-like hydrolase LMOf2365_0439 103 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46907340 Common - hypothetical protein LMOf2365_1130 3 None None None 46907220 Common prfC peptide chain release factor 3 LMOf2365_1009 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 46907599 Common - 2-oxoisovalerate dehydrogenase E1 component, beta subunit LMOf2365_1390 212 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 46906382 Pathogen - hypothetical protein LMOf2365_0161 2 None None None 46908791 Common rpsN 30S ribosomal protein S14 LMOf2365_2592 184 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 46908588 Common - ABC transporter, substrate-binding protein LMOf2365_2388 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 46907487 Common - hypothetical protein LMOf2365_1278 7 COG2339 COG2339, Predicted membrane protein Function unknown 46906350 Common - lipase LMOf2365_0128 132 COG0657 Aes, Esterase/lipase Lipid metabolism 46907496 Common - signal peptidase I LMOf2365_1287 199 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 46907629 Common - conserved hypothetical protein TIGR00282 LMOf2365_1420 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 46906759 Common - cell wall surface anchor family protein LMOf2365_0543 9 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46907210 Common - hypothetical protein LMOf2365_0998 19 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 46908444 Common - hypothetical protein LMOf2365_2243 1 None None None 46907131 Common - hypothetical protein LMOf2365_0918 12 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 46908245 Common - cold-shock domain family protein LMOf2365_2041 181 COG1278 CspC, Cold shock proteins Transcription 46906750 Common rpe-1 ribulose-phosphate 3-epimerase LMOf2365_0534 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 46906372 Common - inositol-5-monophosphate dehydrogenase LMOf2365_0150 234 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 46906997 Common - hypothetical protein LMOf2365_0782 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46906747 Common - SIS domain protein LMOf2365_0531 160 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 46908421 Common - hypothetical protein LMOf2365_2220 1 None None None 46907936 Common - deoxynucleoside kinase family protein LMOf2365_1729 40 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 46906435 Common mpl zinc metallopeptidase LMOf2365_0214 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 46908904 Common - hypothetical protein LMOf2365_2705 1 None None None 46907691 Common cdd cytidine deaminase LMOf2365_1482 113 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 46908955 Common - phosphosugar-binding transcriptional regulator, RpiR family LMOf2365_2756 78 COG1737 RpiR, Transcriptional regulators Transcription 46907084 Common sugE-1 SugE protein LMOf2365_0870 124 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 46907096 Common - phosphoglucomutase/phosphomannomutase family protein LMOf2365_0882 234 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 46908522 Common - transcriptional regulator, LysR family LMOf2365_2322 191 COG0583 LysR, Transcriptional regulator Transcription 46906591 Common - hypothetical protein LMOf2365_0371 30 COG3412 COG3412, Uncharacterized protein conserved in bacteria Function unknown 46907930 Common - methyl-accepting chemotaxis protein LMOf2365_1723 88 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 46908485 Common aspB aspartate aminotransferase LMOf2365_2285 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 46908726 Common - glycosyl transferase, group 1 family protein LMOf2365_2527 219 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 46906311 Pathogen - hypothetical protein LMOf2365_0089 1 None None None 46907805 Common dnaE DNA polymerase III, alpha subunit LMOf2365_1596 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 46906475 Common - hypothetical protein LMOf2365_0254 29 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 46906327 Common - ATP synthase F0, C subunit family protein LMOf2365_0105 1 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 46906477 Common rpmG 50S ribosomal protein L33 LMOf2365_0256 68 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 46908665 Common - transcriptional regulator, ArsR family LMOf2365_2466 161 COG0640 ArsR, Predicted transcriptional regulators Transcription 46908900 Pathogen - hypothetical protein LMOf2365_2701 2 None None None 46907231 Common - hypothetical protein LMOf2365_1020 4 None None None 46907180 Common - transcriptional regulator, GntR family LMOf2365_0968 148 COG2186 FadR, Transcriptional regulators Transcription 46907730 Common - conserved hypothetical protein TIGR00250 LMOf2365_1521 170 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 46908368 Common - hypothetical protein LMOf2365_2166 3 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908371 Common - DNA-binding/PRD domain protein LMOf2365_2170 32 COG3711 BglG, Transcriptional antiterminator Transcription 46907745 Common - nitrogen regulatory protein P-II LMOf2365_1536 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 46908462 Pathogen - hypothetical protein LMOf2365_2261 1 None None None 46908687 Common degU DNA-binding response regulator DegU LMOf2365_2488 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 46906713 Common - hypothetical protein LMOf2365_0496 2 None None None 46907587 Common xseA exodeoxyribonuclease VII large subunit LMOf2365_1378 204 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 46908640 Common clpP ATP-dependent Clp protease proteolytic subunit LMOf2365_2441 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 46907819 Common argD acetylornithine aminotransferase LMOf2365_1610 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 46909002 Common - hypothetical protein LMOf2365_2804 1 None None None 46908876 Common - phosphosugar-binding transcriptional regulator, RpiR family LMOf2365_2677 77 COG1737 RpiR, Transcriptional regulators Transcription 46907143 Common - hypothetical protein LMOf2365_0930 195 COG0628 PerM, Predicted permease General function prediction only 46907322 Common - hypothetical protein LMOf2365_1111 2 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 46906733 Common - MutT/nudix family protein LMOf2365_0517 94 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 46908842 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_2643 214 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 46908441 Common - hypothetical protein LMOf2365_2240 2 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 46906299 Common - hypothetical protein LMOf2365_0077 3 COG5444 COG5444, Uncharacterized conserved protein Function unknown 46908284 Common - hypothetical protein LMOf2365_2080 26 COG1323 COG1323, Predicted nucleotidyltransferase General function prediction only 46907835 Pathogen - hypothetical protein LMOf2365_1626 1 None None None 46907354 Common - cell wall surface anchor family protein LMOf2365_1144 32 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46907950 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_1743 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46907380 Common pduM propanediol utilization protein PduM LMOf2365_1170 1 None None None 46908828 Pathogen - hypothetical protein LMOf2365_2629 1 None None None 46907024 Common - hypothetical protein LMOf2365_0810 48 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 46907810 Common ald alanine dehydrogenase LMOf2365_1601 166 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 46907194 Common - LemA protein LMOf2365_0982 130 COG1704 LemA, Uncharacterized conserved protein Function unknown 46908918 Common - phosphosugar-binding protein LMOf2365_2719 50 COG1737 RpiR, Transcriptional regulators Transcription 46907478 Common - hypothetical protein LMOf2365_1269 1 None None None 46907207 Common - hypothetical protein LMOf2365_0995 3 None None None 46908134 Common panC pantoate--beta-alanine ligase LMOf2365_1930 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 46906774 Common - glycosyl transferase, group 2 family protein LMOf2365_0558 200 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 46908911 Common - MATE efflux family protein LMOf2365_2712 173 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 46906946 Common - hypothetical protein LMOf2365_0731 5 None None None 46907453 Common uvrC excinuclease ABC subunit C LMOf2365_1243 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 46907737 Common - helicase, putative, RecD/TraA family LMOf2365_1528 150 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 46908634 Common - RNA polymerase factor sigma-54 LMOf2365_2434 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 46906871 Common - hypothetical protein LMOf2365_0655 8 None None None 46907329 Common - hypothetical protein LMOf2365_1118 7 COG1944 COG1944, Uncharacterized conserved protein Function unknown 46908617 Common - glycosyl hydrolase, family 31 LMOf2365_2417 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 46906430 Common - UDP-N-acetylglucosamine pyrophosphorylase LMOf2365_0209 238 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 46907687 Common glyQ glycyl-tRNA synthetase subunit alpha LMOf2365_1478 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 46907298 Common - hypothetical protein LMOf2365_1087 7 COG4838 COG4838, Uncharacterized protein conserved in bacteria Function unknown 46906464 Common - ATP:guanido phosphotransferase LMOf2365_0243 25 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 46908475 Common - transcriptional regulator, GntR family LMOf2365_2274 113 COG1725 COG1725, Predicted transcriptional regulators Transcription 46907019 Common - cell wall surface anchor family protein LMOf2365_0805 53 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908960 Common bglA 6-phospho-beta-glucosidase LMOf2365_2761 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46907430 Common - hypothetical protein LMOf2365_1220 71 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 46907468 Common - hypothetical protein LMOf2365_1259 1 None None None 46906955 Common - hypothetical protein LMOf2365_0740 1 None None None 46907168 Common - RNA methyltransferase, TrmH family, group 2 LMOf2365_0956 156 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 46908192 Common - iron compound ABC transporter, permease protein LMOf2365_1988 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 46908093 Common - hypothetical protein LMOf2365_1889 11 COG4698 COG4698, Uncharacterized protein conserved in bacteria Function unknown 46906555 Common thiD-1 phosphomethylpyrimidine kinase LMOf2365_0335 221 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 46907697 Common rpsU 30S ribosomal protein S21 LMOf2365_1488 91 None None None 46908921 Common - sucrose phosphorylase LMOf2365_2722 132 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46908210 Common ilvD dihydroxy-acid dehydratase LMOf2365_2006 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 46908989 Common gidB glucose-inhibited division protein B LMOf2365_2790 188 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 46906473 Common - hypothetical protein LMOf2365_0252 39 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 46907491 Common - lipoprotein, putative LMOf2365_1282 1 None None None 46907975 Common - DNA-binding response regulator LMOf2365_1770 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46906855 Common - LPXTG-motif cell wall anchor domain protein LMOf2365_0639 7 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908169 Common gpsA glycerol-3-phosphate dehydrogenase, NAD-dependent LMOf2365_1965 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 46908334 Common - hypothetical protein LMOf2365_2131 33 COG3711 BglG, Transcriptional antiterminator Transcription 46907482 Common - MutT/nudix family protein LMOf2365_1273 15 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 46908089 Common - hypothetical protein LMOf2365_1885 12 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 46907052 Common - hypothetical protein LMOf2365_0838 1 None None None 46907962 Common - ABC transporter, permease protein LMOf2365_1756 146 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 46908142 Common - YitT family protein LMOf2365_1938 69 COG1284 COG1284, Uncharacterized conserved protein Function unknown 46907229 Common - ATP-dependent Clp protease, ATP-binding subunit ClpE LMOf2365_1018 236 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 46907153 Common - PRD/PTS system IIA 2 domain protein LMOf2365_0940 32 COG3711 BglG, Transcriptional antiterminator Transcription 46907151 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_0938 19 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46907306 Common - glycosyl transferase, group 2 family protein LMOf2365_1095 167 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 46907036 Common - DNA-binding protein LMOf2365_0822 102 COG1396 HipB, Predicted transcriptional regulators Transcription 46906794 Common - leucine rich repeat domain protein LMOf2365_0578 12 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906395 Common - cell wall surface anchor family protein LMOf2365_0174 19 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46907032 Common - hypothetical protein LMOf2365_0818 116 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 46907026 Common - RarD protein LMOf2365_0812 118 COG2962 RarD, Predicted permeases General function prediction only 46906537 Common - nitroreductase family protein LMOf2365_0316 73 COG0778 NfnB, Nitroreductase Energy production and conversion 46907106 Common - PTS system IIA 2 domain protein LMOf2365_0892 41 COG3711 BglG, Transcriptional antiterminator Transcription 46907411 Common cobD cobalamin biosynthesis protein LMOf2365_1201 148 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 46906374 Common - acetyltransferase, GNAT family LMOf2365_0152 46 COG2388 COG2388, Predicted acetyltransferase General function prediction only 46908564 Common - pyridine nucleotide-disulfide oxidoreductase family protein LMOf2365_2364 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 46907838 Common - tRNA-binding domain protein LMOf2365_1629 202 COG0073 ARC1, EMAP domain General function prediction only 46907201 Common - ribosomal large subunit pseudouridine synthase, RluD subfamily LMOf2365_0989 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 46906612 Common - hypothetical protein LMOf2365_0393 1 None None None 46908652 Common - hexapeptide transferase family protein LMOf2365_2453 16 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 46906688 Pathogen - hypothetical protein LMOf2365_0470 1 None None None 46906499 Common - hypothetical protein LMOf2365_0278 1 None None None 46908806 Common - cobalt transport protein LMOf2365_2607 101 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 46908132 Common - bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon LMOf2365_1928 218 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 46908980 Common - lipoprotein, putative LMOf2365_2781 1 None None None 46907583 Common accC acetyl-CoA carboxylase biotin carboxylase subunit LMOf2365_1374 231 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 46907313 Common - glycosyl transferase, group 2 family protein LMOf2365_1102 137 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 46908286 Common - hypothetical protein LMOf2365_2082 42 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 46908314 Common - conserved hypothetical protein TIGR00150 LMOf2365_2110 207 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 46906689 Common inlA internalin A LMOf2365_0471 47 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908814 Common - serine/threonine protein phosphatase family protein LMOf2365_2615 18 COG1409 Icc, Predicted phosphohydrolases General function prediction only 46908992 Common - hypothetical protein LMOf2365_2793 1 None None None 46907543 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase LMOf2365_1334 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 46907896 Common - hypothetical protein LMOf2365_1689 1 None None None 46906637 Common - hypothetical protein LMOf2365_0418 1 None None None 46908227 Common - PTS system, mannose/fructose/sorbose family, IID component LMOf2365_2023 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 46906982 Pathogen - hypothetical protein LMOf2365_0767 1 None None None 46908254 Common nadA quinolinate synthetase LMOf2365_2050 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 46909010 Common - cell wall surface anchor family protein LMOf2365_2812 51 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46907853 Common - PAP2 family protein LMOf2365_1645 125 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 46908887 Common - PTS system, cellobiose-specific, IIC component, putative LMOf2365_2688 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908852 Common - universal stress protein family LMOf2365_2653 87 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 46908181 Common resE sensor histidine kinase ResE LMOf2365_1977 224 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 46906401 Common - hypothetical protein LMOf2365_0180 93 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 46906252 Common - cutC family protein LMOf2365_0029 55 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 46907247 Common - glycine betaine/L-proline ABC transporter, permease protein LMOf2365_1036 175 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 46906454 Common - redox-regulated chaperone protein LMOf2365_0233 136 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 46907877 Common - hypothetical protein LMOf2365_1669 1 None None None 46908261 Common - hypothetical protein LMOf2365_2057 3 None None None 46906381 Common - hypothetical protein LMOf2365_0160 1 None None None 46907160 Common - transcriptional regulator, TetR family LMOf2365_0947 117 COG1309 AcrR, Transcriptional regulator Transcription 46906339 Common - hypothetical protein LMOf2365_0117 25 COG4898 COG4898, Uncharacterized protein conserved in bacteria Function unknown 46907508 Common - 4-hydroxybenzoyl-CoA thioesterase family protein LMOf2365_1299 80 COG0824 FcbC, Predicted thioesterase General function prediction only 46906915 Common - hypothetical protein LMOf2365_0699 1 None None None 46907756 Common - hypothetical protein LMOf2365_1547 4 None None None 46908391 Common - hypothetical protein LMOf2365_2190 12 None None None 46906891 Common - amino acid permease family protein LMOf2365_0676 185 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 46907039 Common - spermidine/putrescine ABC transporter, permease protein LMOf2365_0825 212 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 46906560 Common - hypothetical protein LMOf2365_0340 28 None None None 46906303 Pathogen - hypothetical protein LMOf2365_0081 1 None None None 46907170 Pathogen - hypothetical protein LMOf2365_0958 1 None None None 46907268 Common - hypothetical protein LMOf2365_1057 13 None None None 46908629 Common gpmA phosphoglyceromutase LMOf2365_2429 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 46908047 Common - hypothetical protein LMOf2365_1843 35 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 46907627 Common - hypothetical protein LMOf2365_1418 76 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 46907078 Common - glutamine ABC transporter, permease/substrate-binding protein LMOf2365_0864 187 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 46907652 Common - manganese transport protein MntH LMOf2365_1443 105 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 46906569 Common - cell wall surface anchor family protein LMOf2365_0349 35 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46907946 Common - hypothetical protein LMOf2365_1739 4 None None None 46906548 Common - hypothetical protein LMOf2365_0328 10 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 46908413 Common - cell wall surface anchor family protein LMOf2365_2212 6 None None None 46908719 Common hom homoserine dehydrogenase LMOf2365_2520 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 46908655 Common hprK HPr kinase/phosphorylase LMOf2365_2456 77 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 46907714 Common - iojap-related protein LMOf2365_1505 198 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 46906864 Common - hypothetical protein LMOf2365_0648 3 None None None 46907600 Common - 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase LMOf2365_1391 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 46907071 Common - transcriptional regulator, MarR family LMOf2365_0857 24 COG1846 MarR, Transcriptional regulators Transcription 46908383 Pathogen - hypothetical protein LMOf2365_2182 1 None None None 46908574 Common - acetyltransferase, GNAT family LMOf2365_2374 19 COG2153 ElaA, Predicted acyltransferase General function prediction only 46907521 Common hfq hfq protein LMOf2365_1312 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 46906667 Common - hypothetical protein LMOf2365_0449 1 None None None 46907556 Common rpsO 30S ribosomal protein S15 LMOf2365_1347 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 46906232 Common cls-1 cardiolipin synthetase LMOf2365_0008 155 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 46908080 Common - manganese ABC transporter, permease protein LMOf2365_1876 176 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 46907424 Common - cobalt transport protein CbiN LMOf2365_1214 41 COG1930 CbiN, ABC-type cobalt transport system, periplasmic component Inorganic ion transport and metabolism 46907781 Common folC folylpolyglutamate synthase LMOf2365_1572 218 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 46907527 Common arsB arsenical pump membrane protein LMOf2365_1318 123 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 46906300 Common - hypothetical protein LMOf2365_0078 1 None None None 46908830 Common - hypothetical protein LMOf2365_2631 3 None None None 46906552 Common - hypothetical protein LMOf2365_0332 44 COG3394 COG3394, Uncharacterized protein conserved in bacteria Function unknown 46906814 Common hisZ ATP phosphoribosyltransferase regulatory subunit LMOf2365_0598 248 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 46908766 Pathogen - hypothetical protein LMOf2365_2567 1 None None None 46908123 Common - hypothetical protein LMOf2365_1919 3 None None None 46906518 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_0297 174 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46906579 Pathogen - hypothetical protein LMOf2365_0359 1 None None None 46907196 Common - hypothetical protein LMOf2365_0984 15 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 46908339 Common - ferrous iron transport protein A LMOf2365_2136 4 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 46908643 Common - NADH:flavin oxidoreductase LMOf2365_2444 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 46907519 Common glpD glycerol-3-phosphate dehydrogenase, aerobic LMOf2365_1310 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 46908439 Common gpm phosphoglycerate mutase LMOf2365_2238 158 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 46907539 Common pyrH uridylate kinase LMOf2365_1330 224 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 46907500 Common rnhB ribonuclease HII LMOf2365_1291 207 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 46908343 Common - transcriptional regulator, DeoR family LMOf2365_2140 114 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 46906971 Common - hypothetical protein LMOf2365_0756 6 COG4817 COG4817, Uncharacterized protein conserved in bacteria Function unknown 46908232 Pathogen - hypothetical protein LMOf2365_2028 1 None None None 46907391 Common - alcohol dehydrogenase, iron-dependent LMOf2365_1181 170 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 46908758 Common - hypothetical protein LMOf2365_2559 74 COG1912 COG1912, Uncharacterized conserved protein Function unknown 46907703 Common hrcA heat-inducible transcription repressor LMOf2365_1494 147 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 46907680 Common - conserved hypothetical protein TIGR00486 LMOf2365_1471 110 COG0327 COG0327, Uncharacterized conserved protein Function unknown 46908906 Common - hypothetical protein LMOf2365_2707 1 None None None 46908057 Common coaBC phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase LMOf2365_1853 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 46908066 Common pyrDII dihydroorotate dehydrogenase, electron transfer subunit LMOf2365_1862 104 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 46908400 Common - metallo-beta-lactamase family protein LMOf2365_2199 183 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 46908555 Common - putative monovalent cation/H+ antiporter subunit E LMOf2365_2355 71 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 46908013 Common rplT 50S ribosomal protein L20 LMOf2365_1808 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 46906722 Common - hypothetical protein LMOf2365_0505 22 None None None 46908772 Common - cobalt ABC transporter, ATP-binding protein LMOf2365_2573 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 46906362 Common - hypothetical protein LMOf2365_0140 4 None None None 46906607 Common - glycosyl hydrolase, family 1 LMOf2365_0388 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46908199 Common - MutT/nudix family protein LMOf2365_1995 188 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 46906923 Common - hypothetical protein LMOf2365_0708 48 COG3152 COG3152, Predicted membrane protein Function unknown 46908710 Common upp uracil phosphoribosyltransferase LMOf2365_2511 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 46907844 Common - hypothetical protein LMOf2365_1635 1 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 46908612 Common - hypothetical protein LMOf2365_2412 18 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 46907842 Common - glutamyl-aminopeptidase, putative LMOf2365_1633 88 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 46908542 Common - ABC transporter, permease protein LMOf2365_2342 16 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 46906920 Common - oxidoreductase, short-chain dehydrogenase/reductase family LMOf2365_0704 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46908372 Common - ABC transporter, ATP-binding protein LMOf2365_2171 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 46906836 Common - hypothetical protein LMOf2365_0620 36 COG3752 COG3752, Predicted membrane protein Function unknown 46907249 Common - PTS system, glucose-specific, IIA component, putative LMOf2365_1038 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 46908026 Common - hypothetical protein LMOf2365_1821 10 None None None 46906437 Common plcB phospholipase C LMOf2365_0216 6 None None None 46907988 Common ligA NAD-dependent DNA ligase LigA LMOf2365_1783 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 46906884 Pathogen - hypothetical protein LMOf2365_0668 1 None None None 46907620 Common - hypothetical protein LMOf2365_1411 128 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 46906769 Common - sulfate transporter family protein LMOf2365_0553 159 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 46907272 Common modB molybdenum ABC transporter, permease protein LMOf2365_1061 203 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 46906695 Common - penicillin-binding protein LMOf2365_0478 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 46908103 Common - serine protease, putative LMOf2365_1900 20 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 46906854 Common - rhodanese-like domain protein LMOf2365_0638 137 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 46906948 Common flgE flagellar hook protein FlgE LMOf2365_0733 127 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 46908549 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type LMOf2365_2349 198 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 46906484 Common rplL 50S ribosomal protein L7/L12 LMOf2365_0263 209 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 46907772 Common minD septum site-determining protein MinD LMOf2365_1563 164 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 46908722 Common rho transcription termination factor Rho LMOf2365_2523 202 COG1158 Rho, Transcription termination factor Transcription 46907371 Common pduC glycerol dehydratase large subunit LMOf2365_1161 13 COG4909 PduC, Propanediol dehydratase, large subunit Secondary metabolites biosynthesis, transport, and catabolism 46906511 Common - hypothetical protein LMOf2365_0290 7 None None None 46908535 Common - transcriptional regulator, RofA family LMOf2365_2335 3 COG3711 BglG, Transcriptional antiterminator Transcription 46908119 Common - hypothetical protein LMOf2365_1916 134 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 46906570 Common - cell wall surface anchor family protein LMOf2365_0350 94 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908860 Common kdpB potassium-transporting ATPase subunit B LMOf2365_2661 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 46906283 Common - DHH subfamily 1 protein LMOf2365_0061 84 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 46908779 Common rpsK 30S ribosomal protein S11 LMOf2365_2580 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 46906413 Common - sugar ABC transporter, sugar-binding protein LMOf2365_0192 118 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 46907080 Common - amidase LMOf2365_0866 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 46906706 Common - cytosine/purines/uracil/thiamine/allantoin permease family protein LMOf2365_0489 71 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 46908110 Common - manganese transport transcriptional regulator LMOf2365_1907 97 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 46906317 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein LMOf2365_0095 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 46906729 Common - hypothetical protein LMOf2365_0513 2 None None None 46908172 Common cmk cytidylate kinase LMOf2365_1968 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 46906271 Common - hypothetical protein LMOf2365_0049 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 46907764 Common pheA prephenate dehydratase LMOf2365_1555 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 46907233 Common - hypothetical protein LMOf2365_1022 4 COG4873 COG4873, Uncharacterized protein conserved in bacteria Function unknown 46908325 Common argG argininosuccinate synthase LMOf2365_2122 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 46906646 Common - hypothetical protein LMOf2365_0428 10 COG5341 COG5341, Uncharacterized protein conserved in bacteria Function unknown 46907981 Common - RNA methyltransferase, TrmA family LMOf2365_1776 199 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 46907619 Common - ABC transporter, permease protein, putative LMOf2365_1410 109 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 46906735 Common - NADH:flavin oxidoreductase LMOf2365_0519 181 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 46907261 Common - Cof-like hydrolase LMOf2365_1050 134 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46908024 Common trmD tRNA (guanine-N1)-methyltransferase LMOf2365_1819 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 46906741 Common - hypothetical protein LMOf2365_0525 149 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 46907744 Common - ammonium transporter LMOf2365_1535 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 46907227 Common - hypothetical protein LMOf2365_1016 16 COG3594 NolL, Fucose 4-O-acetylase and related acetyltransferases Carbohydrate transport and metabolism 46909004 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase LMOf2365_2806 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46906708 Common - hydantoinase/oxoprolinase family protein LMOf2365_0491 116 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 46907660 Common - hypothetical protein LMOf2365_1451 1 None None None 46906780 Common - transcriptional regulator, LacI family LMOf2365_0564 125 COG1609 PurR, Transcriptional regulators Transcription 46908002 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase LMOf2365_1797 191 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 46908362 Common nplT neopullulanase LMOf2365_2160 172 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46908895 Common cydC ABC transporter, ATP-binding protein CydC LMOf2365_2696 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 46907066 Common - cell wall surface anchor family protein LMOf2365_0852 4 None None None 46907441 Common pheT phenylalanyl-tRNA synthetase, beta subunit LMOf2365_1231 247 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 46908151 Common - conserved hypothetical protein TIGR00275 LMOf2365_1947 171 COG2081 COG2081, Predicted flavoproteins General function prediction only 46909006 Common - carboxypeptidase, putative LMOf2365_2808 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 46907086 Common ddl D-alanyl-alanine synthetase A LMOf2365_0872 214 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 46908500 Common addA ATP-dependent nuclease, subunit A LMOf2365_2300 229 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 46907334 Pathogen - hypothetical protein LMOf2365_1123 1 None None None 46908374 Common - acetyltransferase, GNAT family LMOf2365_2173 92 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46906226 Common dnaN DNA polymerase III subunit beta LMOf2365_0002 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 46908594 Common - cation efflux family protein LMOf2365_2394 221 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 46907903 Common menE O-succinylbenzoic acid--CoA ligase LMOf2365_1696 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 46908203 Common - oxidoreductase, short-chain dehydrogenase/reductase family LMOf2365_1999 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 46907941 Common - flavodoxin LMOf2365_1734 83 COG0716 FldA, Flavodoxins Energy production and conversion 46907110 Common - glucosamine-6-phosphate isomerase, putative LMOf2365_0896 74 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 46908293 Common - cytochrome oxidase assembly protein LMOf2365_2089 64 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 46908426 Common - oligopeptide ABC transporter, ATP-binding protein LMOf2365_2225 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 46908480 Common - oxidoreductase, aldo/keto reductase family LMOf2365_2280 172 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 46906999 Common - hypothetical protein LMOf2365_0784 32 COG0400 COG0400, Predicted esterase General function prediction only 46908235 Common - ABC transporter, substrate-binding protein LMOf2365_2031 18 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 46908582 Common sufB FeS assembly protein SufB LMOf2365_2382 187 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 46908071 Common uraA uracil permease LMOf2365_1867 124 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 46907451 Common mutS-1 recombination and DNA strand exchange inhibitor protein LMOf2365_1241 201 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 46907363 Common - hypothetical protein LMOf2365_1153 12 None None None 46907667 Common sod superoxide dismutase, Mn LMOf2365_1458 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 46906543 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_0322 28 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46907445 Common - membrane protein, MmpL family LMOf2365_1235 89 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 46906749 Common - hypothetical protein LMOf2365_0533 1 None None None 46907616 Common - surface antigen LMOf2365_1407 92 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 46907799 Common - hypothetical protein LMOf2365_1590 27 COG2707 COG2707, Predicted membrane protein Function unknown 46907015 Common - sigma-54 dependent transcriptional regulator LMOf2365_0801 160 COG3933 COG3933, Transcriptional antiterminator Transcription 46907343 Common - hypothetical protein LMOf2365_1133 14 COG4815 COG4815, Uncharacterized protein conserved in bacteria Function unknown 46907780 Pathogen - hypothetical protein LMOf2365_1571 1 None None None 46908177 Common - ferredoxin, 4Fe-4S LMOf2365_1973 9 COG1141 Fer, Ferredoxin Energy production and conversion 46908807 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase LMOf2365_2608 51 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 46907948 Common - transcriptional regulator, TetR family LMOf2365_1741 55 COG1309 AcrR, Transcriptional regulator Transcription 46906260 Common - hypothetical protein LMOf2365_0038 2 None None None 46907824 Common - aminotransferase, class V LMOf2365_1615 238 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 46907647 Common - hypothetical protein LMOf2365_1438 140 COG0628 PerM, Predicted permease General function prediction only 46908976 Common - hypothetical protein LMOf2365_2777 27 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 46908184 Common - conserved hypothetical protein TIGR00281 LMOf2365_1980 153 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 46907996 Common purN phosphoribosylglycinamide formyltransferase LMOf2365_1791 220 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 46907250 Common - cutC family protein LMOf2365_1039 59 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 46908838 Common rpe-3 ribulose-phosphate 3-epimerase LMOf2365_2639 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 46907917 Common - hypothetical protein LMOf2365_1710 20 COG4129 COG4129, Predicted membrane protein Function unknown 46906643 Common - phosphate transporter family protein LMOf2365_0425 167 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 46906677 Pathogen - hypothetical protein LMOf2365_0459 1 None None None 46906593 Common - acetyltransferase, GNAT family LMOf2365_0373 17 COG0456 RimI, Acetyltransferases General function prediction only 46909045 Common - hypothetical protein LMOf2365_2847 1 None None None 46907475 Pathogen - hypothetical protein LMOf2365_1266 1 None None None 46907968 Common - amino acid ABC transporter, amino acid-binding protein LMOf2365_1762 175 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 46907373 Common pduE propanediol utilization: dehydratase, small subunit LMOf2365_1163 13 COG4910 PduE, Propanediol dehydratase, small subunit Secondary metabolites biosynthesis, transport, and catabolism 46906353 Common - hypothetical protein LMOf2365_0131 7 None None None 46909018 Common - hypothetical protein LMOf2365_2820 28 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 46908205 Pathogen - hypothetical protein LMOf2365_2001 1 None None None 46908381 Common - hypothetical protein LMOf2365_2180 10 COG4330 COG4330, Predicted membrane protein Function unknown 46907982 Common - hypothetical protein LMOf2365_1777 1 None None None 46907863 Common trpE anthranilate synthase component I LMOf2365_1655 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 46907120 Common - hypothetical protein LMOf2365_0906 13 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 46908788 Common rplR 50S ribosomal protein L18 LMOf2365_2589 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 46907868 Common - hypothetical protein LMOf2365_1660 83 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 46906762 Common - phosphoglycerate mutase family protein LMOf2365_0546 119 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46906609 Common - PTS system, beta-glucoside-specific, IIB component LMOf2365_0390 30 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46908300 Common - hypothetical protein LMOf2365_2096 1 None None None 46908819 Common - phosphotriesterase family protein LMOf2365_2620 35 COG1735 Php, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 46906531 Common - hypothetical protein LMOf2365_0310 9 COG4853 COG4853, Uncharacterized protein conserved in bacteria Function unknown 46906567 Common - cell wall surface anchor family protein LMOf2365_0347 31 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908427 Common - oligopeptide ABC transporter, ATP-binding protein LMOf2365_2226 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 46908011 Common - hypothetical protein LMOf2365_1806 37 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 46908781 Common rpmJ 50S ribosomal protein L36 LMOf2365_2582 136 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 46907404 Common - carboxysome protein, putative LMOf2365_1194 27 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46908054 Common sun sun protein LMOf2365_1850 214 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 46908603 Common - hypothetical protein LMOf2365_2403 1 None None None 46906582 Common tkt-1 transketolase LMOf2365_0362 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 46908068 Common carA carbamoyl phosphate synthase small subunit LMOf2365_1864 236 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 46908469 Common - NADH oxidase, putative LMOf2365_2268 224 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 46906247 Common - PTS system, fructose-specific, IIA component LMOf2365_0024 12 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 46906427 Common - ABC transporter, permease protein LMOf2365_0206 177 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 46907625 Common - competence/damage-inducible protein CinA LMOf2365_1416 212 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 46908253 Common nadC nicotinate-nucleotide pyrophosphorylase LMOf2365_2049 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 46908892 Common - hypothetical protein LMOf2365_2693 21 COG3786 COG3786, Uncharacterized protein conserved in bacteria Function unknown 46908508 Common - aminopeptidase C LMOf2365_2308 17 COG3579 PepC, Aminopeptidase C Amino acid transport and metabolism 46908472 Common - major facilitator family transporter LMOf2365_2271 26 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908685 Common - helicase family protein LMOf2365_2486 31 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 46908031 Common - protein-tyrosine phosphatase, putative LMOf2365_1827 50 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 46908661 Common uvrB excinuclease ABC subunit B LMOf2365_2462 233 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 46907638 Common - hypothetical protein LMOf2365_1429 2 None None None 46907145 Common - hypothetical protein LMOf2365_0932 8 COG4194 COG4194, Predicted membrane protein General function prediction only 46906234 Common - hypothetical protein LMOf2365_0010 1 None None None 46907735 Common - DNA-binding response regulator LMOf2365_1526 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46908753 Common - sensor histidine kinase LMOf2365_2554 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 46908704 Common atpH ATP synthase F1, delta subunit LMOf2365_2505 157 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 46908967 Common - drug resistance transporter, Bcr/CflA family LMOf2365_2768 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907356 Common clpP-1 ATP-dependent Clp protease proteolytic subunit LMOf2365_1146 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 46907833 Common - aminopeptidase, putative LMOf2365_1624 61 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 46907094 Common - hypothetical protein LMOf2365_0880 3 None None None 46907851 Common - MutT/nudix family protein LMOf2365_1643 26 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 46906329 Common atpA-1 F0F1 ATP synthase subunit alpha LMOf2365_0107 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 46906870 Common - lipase/acylhydrolase, putative LMOf2365_0654 2 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 46908275 Common - penicillin-binding protein LMOf2365_2071 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 46908731 Common rpoE DNA-directed RNA polymerase subunit delta LMOf2365_2532 14 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 46906297 Common - hypothetical protein LMOf2365_0075 2 None None None 46907956 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_1750 141 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46908447 Common - hypothetical protein LMOf2365_2246 4 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 46908735 Common - 4-oxalocrotonate tautomerase LMOf2365_2536 26 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 46907812 Common ackA acetate kinase LMOf2365_1603 162 COG0282 ackA, Acetate kinase Energy production and conversion 46908038 Common acpP acyl carrier protein LMOf2365_1834 183 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 46908947 Common - hypothetical protein LMOf2365_2748 115 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 46907435 Common - N-acetylmuramoyl-L-alanine amidase, family 4 LMOf2365_1225 68 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 46907794 Common coaE dephospho-CoA kinase LMOf2365_1585 210 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 161611352 Common fliD flagellar capping protein LMOf2365_0743 80 COG1345 FliD, Flagellar capping protein Cell motility and secretion 46906869 Common - acetyltransferase, GNAT family LMOf2365_0653 35 COG0456 RimI, Acetyltransferases General function prediction only 46908793 Common rplX 50S ribosomal protein L24 LMOf2365_2594 214 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 46908957 Common - hypothetical protein LMOf2365_2758 4 None None None 46908438 Common - hypothetical protein LMOf2365_2237 1 None None None 46908646 Common - hypothetical protein LMOf2365_2447 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 46906957 Common flgL flagellar hook-associated protein FlgL LMOf2365_0742 108 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 46907382 Common - PduO protein LMOf2365_1172 133 COG2096 COG2096, Uncharacterized conserved protein Function unknown 46906259 Common - hypothetical protein LMOf2365_0037 2 None None None 46908164 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase LMOf2365_1960 228 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46908869 Common - autolysin LMOf2365_2670 99 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 46908636 Common - transcriptional regulator, TetR family LMOf2365_2437 128 COG1309 AcrR, Transcriptional regulator Transcription 46906384 Pathogen - hypothetical protein LMOf2365_0163 1 None None None 46907253 Common - histidine kinase, putative LMOf2365_1042 154 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 46908491 Common - ribulose-phosphate 3-epimerase family protein LMOf2365_2291 1 None None None 46908247 Common dapF diaminopimelate epimerase LMOf2365_2043 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 46908698 Common murA-1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase LMOf2365_2499 210 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 46907328 Pathogen - hypothetical protein LMOf2365_1117 3 None None None 46907000 Common - hypothetical protein LMOf2365_0785 71 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 46907458 Common - HAM1 family protein LMOf2365_1248 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 46906598 Common - hypothetical protein LMOf2365_0379 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 46908309 Common - ABC transporter, ATP-binding protein LMOf2365_2105 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46907787 Common hemA glutamyl-tRNA reductase LMOf2365_1578 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 46907280 Common moaB molybdenum cofactor biosynthesis protein B LMOf2365_1069 189 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 46906403 Common - tetrapyrrole methylase family protein LMOf2365_0182 210 COG0313 COG0313, Predicted methyltransferases General function prediction only 46908524 Common - hypothetical protein LMOf2365_2324 113 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 46906862 Common - lipoprotein, putative LMOf2365_0646 2 None None None 46906787 Common srlB PTS system, glucitol/sorbitol-specific, IIA component LMOf2365_0571 19 COG3731 SrlB, Phosphotransferase system sorbitol-specific component IIA Carbohydrate transport and metabolism 46906503 Common inlD internalin D LMOf2365_0282 40 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908460 Common - hypothetical protein LMOf2365_2259 9 None None None 46908452 Common - hypothetical protein LMOf2365_2251 2 None None None 46906441 Common - hypothetical protein LMOf2365_0220 5 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 46907108 Common - PTS system, beta-glucoside-specific, IIB component LMOf2365_0894 30 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46907463 Common - cell wall surface anchor family protein LMOf2365_1254 41 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906250 Common - PTS system, mannose/fructose/sorbose family, IID component LMOf2365_0027 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 46908513 Common - monooxygenase, NtaA/SnaA/SoxA/DszA family LMOf2365_2313 70 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 46907565 Common glcK glucokinase LMOf2365_1356 162 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46908144 Common - GGDEF domain protein LMOf2365_1940 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 46907808 Common - metallo-beta-lactamase family protein LMOf2365_1599 106 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 46907077 Common - excinuclease ABC subunit C domain protein LMOf2365_0863 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 46906877 Common - PTS system, fructose-specific, IIC component, putative LMOf2365_0661 67 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 46908684 Common - comFC family protein LMOf2365_2485 78 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 46907807 Common - CBS domain protein LMOf2365_1598 62 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 46907182 Common - hypothetical protein LMOf2365_0970 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 46907601 Pathogen - hypothetical protein LMOf2365_1392 1 None None None 46908355 Common - hypothetical protein LMOf2365_2152 23 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 46908108 Common - ABC transporter, ATP-binding protein LMOf2365_1905 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46907572 Common - general secretion pathway protein F LMOf2365_1363 21 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 46908660 Common uvrA excinuclease ABC, A subunit LMOf2365_2461 240 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 46906379 Common - hypothetical protein LMOf2365_0157 1 None None None 46908848 Common - hypothetical protein LMOf2365_2649 12 COG4905 COG4905, Predicted membrane protein Function unknown 46907375 Common - PduH protein LMOf2365_1165 10 None None None 46907801 Common pyk pyruvate kinase LMOf2365_1592 237 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 46906990 Common - hypothetical protein LMOf2365_0775 1 None None None 46909038 Common - sugar transporter, putative LMOf2365_2840 141 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907081 Common - hypothetical protein LMOf2365_0867 1 None None None 46907949 Common - hypothetical protein LMOf2365_1742 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 46907148 Common gabD succinate-semialdehyde dehydrogenase LMOf2365_0935 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 46908130 Common - aspartate aminotransferase LMOf2365_1926 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 46907310 Common galU UTP-glucose-1-phosphate uridylyltransferase LMOf2365_1099 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 46908017 Common - internalin family protein LMOf2365_1812 31 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906587 Common - dihydroxyacetone kinase LMOf2365_0367 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 46907734 Common - ABC transporter, permease protein LMOf2365_1525 37 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 46906412 Common - sugar ABC transporter, permease protein LMOf2365_0191 149 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 46906782 Common - allantoate amidohydrolase LMOf2365_0566 91 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 46907199 Common - hypothetical protein LMOf2365_0987 69 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 46906767 Common - phosphosugar-binding transcriptional regulator, RpiR family LMOf2365_0551 81 COG1737 RpiR, Transcriptional regulators Transcription 46907372 Common pduD propanediol utilization: dehydratase, medium subunit LMOf2365_1162 13 None None None 46906294 Common - diarrheal toxin/FtsK/SpoIIIE family protein LMOf2365_0072 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 46907282 Common - hypothetical protein LMOf2365_1071 6 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 46907802 Common pfkA 6-phosphofructokinase LMOf2365_1593 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 46906711 Common - hypothetical protein LMOf2365_0494 22 None None None 46907002 Common - Ser/Thr protein phosphatase family protein LMOf2365_0787 88 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 46907358 Common - siroheme synthase subunit family protein LMOf2365_1148 47 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 46908162 Common ndk nucleoside diphosphate kinase LMOf2365_1958 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 46906742 Common - hypothetical protein LMOf2365_0526 14 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 46907568 Common - hypothetical protein LMOf2365_1359 1 COG4940 ComGF, Competence protein ComGF Intracellular trafficking and secretion 46907934 Common - RNA methyltransferase, TrmA family LMOf2365_1727 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 46907187 Common - hypothetical protein LMOf2365_0975 5 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 46907694 Common - HDIG domain protein LMOf2365_1485 57 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 46908477 Common - ribosomal large subunit pseudouridine synthase, RluD subfamily LMOf2365_2277 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 46906700 Common - hypothetical protein LMOf2365_0483 15 COG3619 COG3619, Predicted membrane protein Function unknown 46908176 Common - hypothetical protein LMOf2365_1972 7 COG4955 COG4955, Uncharacterized protein conserved in bacteria Function unknown 46908434 Common - transcriptional regulator, MarR family LMOf2365_2233 110 COG1846 MarR, Transcriptional regulators Transcription 46907784 Common hemB delta-aminolevulinic acid dehydratase LMOf2365_1575 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 46908515 Common - bacterial luciferase family protein LMOf2365_2315 117 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 46906236 Common mvaD diphosphomevalonate decarboxylase LMOf2365_0012 32 COG3407 MVD1, Mevalonate pyrophosphate decarboxylase Lipid metabolism 46907021 Common - EbsC protein LMOf2365_0807 113 COG2606 EbsC, Uncharacterized conserved protein Function unknown 46908365 Common - hypothetical protein LMOf2365_2163 1 None None None 46906777 Common - hypothetical protein LMOf2365_0561 6 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46907090 Common - sugar ABC transporter, sugar-binding protein LMOf2365_0876 65 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 46908723 Common murA-2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase LMOf2365_2524 212 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 46907821 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein LMOf2365_1612 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 46906755 Common - lipoprotein, putative LMOf2365_0539 1 None None None 46907087 Common murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase LMOf2365_0873 213 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 46907351 Common - hypothetical protein LMOf2365_1141 3 None None None 46907255 Common - TrkA domain protein LMOf2365_1044 152 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 46908969 Common ychF translation-associated GTPase LMOf2365_2770 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 46907923 Common - hypothetical protein LMOf2365_1716 2 None None None 46907607 Common - OxaA-like protein precursor LMOf2365_1398 196 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 46908190 Common - transcriptional regulator, Fur family LMOf2365_1986 198 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 46908216 Common leuC isopropylmalate isomerase large subunit LMOf2365_2012 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 46908240 Common - hypothetical protein LMOf2365_2036 5 COG5578 COG5578, Predicted integral membrane protein Function unknown 46908139 Common mgsA methylglyoxal synthase LMOf2365_1935 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 46908446 Common hemE uroporphyrinogen decarboxylase LMOf2365_2245 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 46907140 Common - hypothetical protein LMOf2365_0927 2 COG5350 COG5350, Predicted protein tyrosine phosphatase General function prediction only 46908036 Common - ribonuclease III LMOf2365_1832 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 46907743 Common - Rrf2 family protein LMOf2365_1534 173 COG1959 COG1959, Predicted transcriptional regulator Transcription 46906707 Common - hypothetical protein LMOf2365_0490 36 COG3535 COG3535, Uncharacterized conserved protein Function unknown 46907457 Common rph ribonuclease PH LMOf2365_1247 191 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 46908691 Common - glycosyl transferase, group 4 family protein LMOf2365_2492 154 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 46906993 Common - hypothetical protein LMOf2365_0778 8 None None None 46908023 Common - hypothetical protein LMOf2365_1818 1 None None None 46906445 Common pth peptidyl-tRNA hydrolase LMOf2365_0224 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 46907911 Common - cystathionine beta/gamma-lyase LMOf2365_1704 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 46906428 Common spoVG-1 regulatory protein SpoVG LMOf2365_0207 24 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 46906792 Common - DNA-binding transcriptional regulator, putative LMOf2365_0576 70 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 46906651 Common - ZIP zinc transporter family protein LMOf2365_0433 96 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 46907474 Common - transcriptional regulator, putative LMOf2365_1265 13 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908030 Common - hypothetical protein LMOf2365_1825 8 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 46908167 Common hup DNA-binding protein HU LMOf2365_1963 209 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 46906770 Pathogen - hypothetical protein LMOf2365_0554 1 None None None 46907792 Common - DNA replication protein DnaB LMOf2365_1583 16 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 46906471 Common cysE serine O-acetyltransferase LMOf2365_0250 196 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 46907797 Common icd isocitrate dehydrogenase LMOf2365_1588 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 46908946 Pathogen - hypothetical protein LMOf2365_2747 1 None None None 46906393 Common - hypothetical protein LMOf2365_0172 85 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 46907651 Common - hypothetical protein LMOf2365_1442 1 COG3096 MukB, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 46907465 Common - hypothetical protein LMOf2365_1256 14 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 46907998 Common purF amidophosphoribosyltransferase LMOf2365_1793 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 46907320 Common - PTS system, IIB component, putative LMOf2365_1109 21 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46906978 Common - riboflavin kinase/FMN adenylyltransferase, putative LMOf2365_0763 209 COG0196 RibF, FAD synthase Coenzyme metabolism 46908606 Common - hypothetical protein LMOf2365_2406 2 COG5658 COG5658, Predicted integral membrane protein Function unknown 46909014 Common serC phosphoserine aminotransferase LMOf2365_2816 116 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 46907374 Common pduG propanediol utilization: diol dehydratase reactivation LMOf2365_1164 12 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 46907327 Common - hypothetical protein LMOf2365_1116 36 None None None 46907068 Common - ABC transporter, ATP-binding protein LMOf2365_0854 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46907766 Common glpK glycerol kinase LMOf2365_1557 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 46906878 Common - PTS system, fructose-specific, IIB component, putative LMOf2365_0662 68 COG1445 FrwB, Phosphotransferase system fructose-specific component IIB Carbohydrate transport and metabolism 46908990 Pathogen - hypothetical protein LMOf2365_2791 1 None None None 46907723 Common - hypothetical protein LMOf2365_1514 4 None None None 46908507 Common - transcriptional regulator, DeoR family LMOf2365_2307 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 46906574 Common - hypothetical protein LMOf2365_0354 4 None None None 46906675 Common - hypothetical protein LMOf2365_0457 1 None None None 46907571 Common - general secretion pathway protein G LMOf2365_1362 6 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 46907649 Common - glycine betaine/L-proline ABC transporter, ATP-binding protein LMOf2365_1440 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 46908396 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_2195 185 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46906387 Common - hypothetical protein LMOf2365_0166 2 None None None 46908409 Common - transcriptional regulator, TetR family LMOf2365_2208 29 COG1309 AcrR, Transcriptional regulator Transcription 46907252 Common - hypothetical protein LMOf2365_1041 9 COG4758 COG4758, Predicted membrane protein Function unknown 46906246 Common - transcriptional regulator, GntR family LMOf2365_0023 115 COG2188 PhnF, Transcriptional regulators Transcription 46906322 Common - transcriptional regulator, MerR family LMOf2365_0100 131 COG0789 SoxR, Predicted transcriptional regulators Transcription 46908929 Common - putative translaldolase LMOf2365_2730 130 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 46906933 Common flgG flagellar basal body rod protein FlgG LMOf2365_0718 125 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 46906240 Common qoxB quinol oxidase AA3, subunit I LMOf2365_0017 168 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 46908206 Common zwf glucose-6-phosphate 1-dehydrogenase LMOf2365_2002 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 46908972 Common - PTS system, beta-glucoside-specific, IIB component LMOf2365_2773 30 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46906739 Common - hydrolase, CocE/NonD family LMOf2365_0523 61 COG2936 COG2936, Predicted acyl esterases General function prediction only 46907758 Common tgt queuine tRNA-ribosyltransferase LMOf2365_1549 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 46906627 Common proC pyrroline-5-carboxylate reductase LMOf2365_0408 215 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 46906760 Common - universal stress protein family LMOf2365_0544 76 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 46908873 Common - dihydroxyacetone kinase, Dak1 subunit, putative LMOf2365_2674 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 46908999 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA LMOf2365_2801 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 46908824 Common - PTS system, IIA component, putative LMOf2365_2625 45 COG3711 BglG, Transcriptional antiterminator Transcription 46908979 Common - DNA-binding protein LMOf2365_2780 1 None None None 46908003 Common purB adenylosuccinate lyase LMOf2365_1798 240 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 46908831 Common tuf elongation factor Tu LMOf2365_2632 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 46907634 Common pfl-1 formate acetyltransferase LMOf2365_1425 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 46907421 Common cbiK cobalt chelatase LMOf2365_1211 25 COG4822 CbiK, Cobalamin biosynthesis protein CbiK, Co2+ chelatase Coenzyme metabolism 46907888 Common - PTS system, sucrose-specific, IIBC component LMOf2365_1681 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 46907418 Common cobJ precorrin-3B C17-methyltransferase LMOf2365_1208 171 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 46907045 Common - hypothetical protein LMOf2365_0831 1 None None None 46907338 Common - hypothetical protein LMOf2365_1128 1 None None None 46906894 Common - magnesium transporter, CorA family LMOf2365_0679 86 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 46906228 Common - hypothetical protein LMOf2365_0004 30 COG2501 COG2501, Uncharacterized conserved protein Function unknown 46906943 Common cheA chemotaxis protein CheA LMOf2365_0728 155 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 46907777 Pathogen - hypothetical protein LMOf2365_1568 1 None None None 46907394 Common eutA reactivating factor for ethanolamine ammonia lyase LMOf2365_1184 17 COG4819 EutA, Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition Amino acid transport and metabolism 46908754 Common - DNA-binding response regulator LMOf2365_2555 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46907172 Common - hypothetical protein LMOf2365_0960 3 None None None 46907275 Common mobB molybdopterin-guanine dinucleotide biosynthesis protein B LMOf2365_1064 108 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 46908179 Common - hypothetical protein LMOf2365_1975 23 COG3601 COG3601, Predicted membrane protein Function unknown 46908706 Common atpE F0F1 ATP synthase subunit C LMOf2365_2507 20 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 46906562 Common - lipoprotein, putative LMOf2365_0342 2 None None None 46907490 Common - hypothetical protein LMOf2365_1281 3 None None None 46907450 Common - hypothetical protein LMOf2365_1240 75 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 46907611 Common fni isopentenyl pyrophosphate isomerase LMOf2365_1402 102 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 46906998 Common - glyoxalase family protein LMOf2365_0783 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46906348 Common - ABC transporter, ATP-binding/permease protein LMOf2365_0126 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46908219 Common budA alpha-acetolactate decarboxylase LMOf2365_2015 40 COG3527 AlsD, Alpha-acetolactate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 46906541 Common - PTS system, cellobiose-specific, IIB component LMOf2365_0320 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46908087 Common - D-alanyl-D-alanine carboxypeptidase, putative LMOf2365_1883 41 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 46906728 Common - heme-degrading monooxygenase IsdG LMOf2365_0511 5 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 46908803 Common rplD 50S ribosomal protein L4 LMOf2365_2604 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 46907088 Common - hydrolase, alpha/beta fold family LMOf2365_0874 55 COG1647 COG1647, Esterase/lipase General function prediction only 46909008 Common - peptidase, M20/M25/M40 family LMOf2365_2810 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 46908204 Common - metallo-beta-lactamase family protein LMOf2365_2000 131 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 46907223 Common - membrane protein, TerC family LMOf2365_1012 27 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 46906420 Common ksgA dimethyladenosine transferase LMOf2365_0199 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 46908287 Common coaD pantetheine-phosphate adenylyltransferase LMOf2365_2083 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 46907446 Common ung-2 uracil-DNA glycosylase LMOf2365_1236 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 46908681 Common prfB peptide chain release factor 2 LMOf2365_2482 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 46908251 Common - carbon-sulfur lyase LMOf2365_2047 234 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 46908156 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase LMOf2365_1952 234 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 46907061 Common - phosphatase, putative LMOf2365_0847 18 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 46908292 Common ctaB protoheme IX farnesyltransferase LMOf2365_2088 175 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 46907517 Common - acyltransferase family protein LMOf2365_1308 104 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 46907116 Common - hypothetical protein LMOf2365_0902 24 COG3428 COG3428, Predicted membrane protein Function unknown 46907541 Common uppS undecaprenyl diphosphate synthase LMOf2365_1332 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 46908129 Common asnC asparaginyl-tRNA synthetase LMOf2365_1925 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 46908299 Common mscL large conductance mechanosensitive channel protein LMOf2365_2095 141 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 46907413 Common cbiD cobalt-precorrin-6A synthase LMOf2365_1203 91 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 46909001 Common - D-alanyl-D-alanine carboxypeptidase, putative LMOf2365_2803 157 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 46908525 Common - transporter, putative LMOf2365_2325 33 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 46906605 Common phnA alkylphosphonate utilization operon protein PhnA LMOf2365_0386 107 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 46906965 Common fliG flagellar motor switch protein G LMOf2365_0750 124 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 46907442 Common - ABC transporter, ATP-binding protein LMOf2365_1232 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46907333 Pathogen - hypothetical protein LMOf2365_1122 1 None None None 46908550 Common - major facilitator family transporter LMOf2365_2350 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908484 Common - amino acid ABC transporter, ATP-binding protein LMOf2365_2284 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 46908457 Common - hypothetical protein LMOf2365_2256 11 COG3679 COG3679, Uncharacterized conserved protein Function unknown 46908584 Common - cysteine desulfurase, SufD subfamily LMOf2365_2384 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 46908187 Common - purine nucleoside phosphorylase LMOf2365_1983 144 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 46908717 Common thrB homoserine kinase LMOf2365_2518 122 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 46906360 Common - hypothetical protein LMOf2365_0138 3 None None None 46906641 Common - hypothetical protein LMOf2365_0423 1 None None None 46907136 Common - transcriptional regulator, GntR family LMOf2365_0923 115 COG2188 PhnF, Transcriptional regulators Transcription 46906272 Common - phosphosugar-binding protein LMOf2365_0050 47 COG1737 RpiR, Transcriptional regulators Transcription 46908531 Common - Rrf2 family protein LMOf2365_2331 54 COG1959 COG1959, Predicted transcriptional regulator Transcription 46907676 Common ppaC putative manganese-dependent inorganic pyrophosphatase LMOf2365_1467 56 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 46906970 Common - transcriptional regulator, PadR family LMOf2365_0755 55 COG1695 COG1695, Predicted transcriptional regulators Transcription 46907041 Common cah carbonic anhydrase LMOf2365_0827 52 COG3338 Cah, Carbonic anhydrase Inorganic ion transport and metabolism 46906525 Common - ABC transporter, ATP-binding protein LMOf2365_0304 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 46908100 Common - hypothetical protein LMOf2365_1897 10 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46907659 Common - ABC transporter, ATP-binding protein LMOf2365_1450 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46908669 Common - phosphate ABC transporter, permease protein LMOf2365_2470 232 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 46906280 Common - accessory gene regulator protein D, putative LMOf2365_0058 1 None None None 46908120 Common - hypothetical protein LMOf2365_1916.5 1 None None None 46906911 Common - carboxymuconolactone decarboxylase family protein LMOf2365_0695 15 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 46907366 Common cobC alpha-ribazole-5'-phosphate phosphatase LMOf2365_1156 151 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46908908 Common - multidrug efflux transporter transcriptional regulatory protein LMOf2365_2709 94 COG0789 SoxR, Predicted transcriptional regulators Transcription 46906307 Common - hypothetical protein LMOf2365_0085 1 None None None 46907537 Common - SNF2 family domain protein LMOf2365_1328 31 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 46906318 Common - hypothetical protein LMOf2365_0096 5 None None None 46908109 Common fhs formate--tetrahydrofolate ligase LMOf2365_1906 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 46906422 Common ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase LMOf2365_0201 184 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 46908996 Common - hypothetical protein LMOf2365_2797 2 None None None 46906244 Common - glycosyl hydrolase, family 1 LMOf2365_0021 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46906730 Common - hypothetical protein LMOf2365_0514 2 None None None 46908611 Common - hypothetical protein LMOf2365_2411 7 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 46908429 Common - oligopeptide ABC transporter, permease protein LMOf2365_2228 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 46906929 Common fliR flagellar biosynthesis protein FliR LMOf2365_0714 113 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 46907553 Common rbfA ribosome-binding factor A LMOf2365_1344 155 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 46907073 Common - cell wall surface anchor family protein LMOf2365_0859 41 None None None 46907596 Common - butyrate kinase LMOf2365_1387 145 COG3426 COG3426, Butyrate kinase Energy production and conversion 46908487 Common - xanthine/uracil permease family protein LMOf2365_2287 135 COG2252 COG2252, Permeases General function prediction only 46908398 Common - hypothetical protein LMOf2365_2197 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46907883 Pathogen - hypothetical protein LMOf2365_1675 1 None None None 46907984 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B LMOf2365_1779 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 46908894 Common cydD ABC transporter, ATP-binding protein CydD LMOf2365_2695 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 46908701 Common atpD-2 F0F1 ATP synthase subunit beta LMOf2365_2502 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 46906846 Common - hypothetical protein LMOf2365_0630 37 COG3595 COG3595, Uncharacterized conserved protein Function unknown 46906853 Common - ABC transporter, ATP-binding/permease protein LMOf2365_0637 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46908805 Common rpsJ 30S ribosomal protein S10 LMOf2365_2606 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 46908920 Common - glycosyl hydrolase, family 38 LMOf2365_2721 39 COG0383 AMS1, Alpha-mannosidase Carbohydrate transport and metabolism 46908302 Common cbH choloylglycine hydrolase LMOf2365_2098 32 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 46906438 Pathogen - hypothetical protein LMOf2365_0217 1 None None None 46908616 Common - leucine rich repeat domain protein LMOf2365_2416 1 None None None 46908045 Common sdhB L-serine dehydratase, iron-sulfur-dependent, beta subunit LMOf2365_1841 117 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 46908323 Common - transcriptional regulator, TetR family LMOf2365_2120 68 COG1309 AcrR, Transcriptional regulator Transcription 46908437 Common - N-acetylmuramoyl-L-alanine amidase, family 4 LMOf2365_2236 67 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 46907209 Common - acetyltransferase, GNAT family LMOf2365_0997 77 COG2153 ElaA, Predicted acyltransferase General function prediction only 46907874 Common - exonuclease, SbcC family LMOf2365_1666 161 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 46908076 Common lspA lipoprotein signal peptidase LMOf2365_1872 174 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 46908406 Common - sigma-54 dependent transcriptional regulator LMOf2365_2205 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 46908773 Common - cobalt ABC transporter, ATP-binding protein LMOf2365_2574 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 46906516 Common - competence protein ComEC/Rec2-related protein LMOf2365_0295 113 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 46908881 Common recR recombination protein RecR LMOf2365_2682 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 46907993 Common - hypothetical protein LMOf2365_1788 19 COG4496 COG4496, Uncharacterized protein conserved in bacteria Function unknown 46907954 Common - ABC transporter, ATP-binding protein LMOf2365_1748 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46906815 Common hisK histidinol-phosphatase LMOf2365_0599 30 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 46906285 Common dnaB replicative DNA helicase LMOf2365_0063 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 46908565 Common - hypothetical protein LMOf2365_2365 91 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 46906737 Common aroD 3-dehydroquinate dehydratase LMOf2365_0521 55 COG0710 AroD, 3-dehydroquinate dehydratase Amino acid transport and metabolism 46907573 Common - general secretion pathway protein E LMOf2365_1364 164 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 46907325 Common - ABC transporter, permease protein LMOf2365_1114 5 None None None 46907304 Common - N-acetylmuramoyl-L-alanine amidase, family 4 LMOf2365_1093 68 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 46906269 Common - peptidyl-arginine deiminase-like protein LMOf2365_0047 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 46906941 Common - flagellin LMOf2365_0726 124 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 46908280 Common - bacterial extracellular solute-binding protein, family 5 LMOf2365_2076 152 COG4533 COG4533, ABC-type uncharacterized transport system, periplasmic component General function prediction only 46908885 Common - hypothetical protein LMOf2365_2686 1 None None None 46907928 Common - cation efflux family protein LMOf2365_1721 76 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 46906885 Common - transcriptional regulator, putative LMOf2365_0670 7 None None None 46906600 Common - hypothetical protein LMOf2365_0381 1 None None None 46906903 Common - hypothetical protein LMOf2365_0688 23 COG2322 COG2322, Predicted membrane protein Function unknown 46906860 Common - hypothetical protein LMOf2365_0644 1 None None None 46907522 Common - GTP-binding domain protein LMOf2365_1313 216 COG2262 HflX, GTPases General function prediction only 46907716 Common nadD nicotinate (nicotinamide) nucleotide adenylyltransferase LMOf2365_1507 189 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 46908829 Common - hypothetical protein LMOf2365_2630 4 None None None 46907017 Common - amino acid permease family protein LMOf2365_0803 153 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 46908352 Common - hypothetical protein LMOf2365_2149 1 None None None 46908802 Common rplW 50S ribosomal protein L23 LMOf2365_2603 213 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 46908742 Common - hypothetical protein LMOf2365_2543 6 COG5658 COG5658, Predicted integral membrane protein Function unknown 46906876 Common - PTS system, fructose-specific, IIA component, putative LMOf2365_0660 111 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46906918 Common - ABC transporter, permease protein LMOf2365_0702 154 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 46908556 Common - putative monovalent cation/H+ antiporter subunit F LMOf2365_2356 89 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 46908622 Common - ribonuclease R, putative LMOf2365_2422 192 COG0557 VacB, Exoribonuclease R Transcription 46907840 Common - thioredoxin family protein LMOf2365_1631 101 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 46906833 Common phrB deoxyribodipyrimidine photolyase LMOf2365_0617 134 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 46907365 Common cobS cobalamin 5'-phosphate synthase LMOf2365_1155 144 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 46908085 Common - copper-translocating P-type ATPase LMOf2365_1881 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 46908933 Common serS seryl-tRNA synthetase LMOf2365_2734 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 46906443 Common - 50S ribosomal protein L25/general stress protein Ctc LMOf2365_0222 157 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 46908822 Common - PTS system IIA 2 domain protein LMOf2365_2623 57 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46906662 Common - PTS system, fructose-specific, IIC component LMOf2365_0444 67 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 46907960 Common - ABC transporter, substrate-binding protein LMOf2365_1754 130 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 46906827 Common iap protein P60 LMOf2365_0611 139 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 46909025 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_2827 157 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 46908810 Common - pyridine nucleotide-disulfide oxidoreductase family protein LMOf2365_2611 190 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 46906595 Common - long-chain acyl-CoA synthetase, putative LMOf2365_0375 186 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 46908482 Common - phosphate transporter family protein LMOf2365_2282 168 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 46907158 Common - ABC transporter, ATP-binding protein LMOf2365_0945 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46907126 Common - serine-protein kinase RsbW LMOf2365_0913 48 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 46908345 Common - hydrolase, alpha/beta fold family LMOf2365_2142 116 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 46906491 Common malL-2 oligo-1,6-glucosidase LMOf2365_0270 161 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46907759 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase LMOf2365_1550 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 46907752 Common apt adenine phosphoribosyltransferase LMOf2365_1543 181 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 46908749 Common - lipoprotein, putative LMOf2365_2550 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 46906924 Common - hypothetical protein LMOf2365_0709 1 None None None 46908270 Common - cell division protein FtsQ LMOf2365_2066 15 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 46908220 Common pyn pyrimidine-nucleoside phosphorylase LMOf2365_2016 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 46908888 Common - hypothetical protein LMOf2365_2689 1 None None None 46906632 Common - cell wall surface anchor family protein LMOf2365_0413 16 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46907204 Common dltC D-alanine--poly(phosphoribitol) ligase subunit 2 LMOf2365_0992 10 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 46908695 Common ssb-2 single-strand binding protein LMOf2365_2496 182 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 46908576 Common - hypothetical protein LMOf2365_2376 11 COG4470 COG4470, Uncharacterized protein conserved in bacteria Function unknown 46908626 Common - hypothetical protein LMOf2365_2426 147 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 46908373 Common - ABC transporter, permease protein LMOf2365_2172 35 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 46906508 Common - phosphoglycerate mutase family protein LMOf2365_0287 182 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46908498 Common - hypothetical protein LMOf2365_2298 3 None None None 46908794 Common rplN 50S ribosomal protein L14 LMOf2365_2595 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 46907631 Common mutS-2 DNA mismatch repair protein LMOf2365_1422 206 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 46906455 Common cysK cysteine synthase A LMOf2365_0234 224 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 46906830 Common - hypothetical protein LMOf2365_0614 7 None None None 46908015 Common infC translation initiation factor IF-3 LMOf2365_1810 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 46907507 Common - transcriptional repressor CodY LMOf2365_1298 20 COG4465 CodY, Pleiotropic transcriptional repressor Transcription 46907427 Common cobQ cobyric acid synthase LMOf2365_1217 162 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 46908592 Common - sensor histidine kinase LMOf2365_2392 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 46907225 Common - cation transport protein LMOf2365_1014 100 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 46906458 Common folB dihydroneopterin aldolase LMOf2365_0237 121 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 46906674 Common - hypothetical protein LMOf2365_0456 1 None None None 46907218 Common - hypothetical protein LMOf2365_1006 1 None None None 46907967 Common - alcohol dehydrogenase, iron-dependent LMOf2365_1761 72 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 46908962 Common - transcription antiterminator, BglG family LMOf2365_2763 29 COG3711 BglG, Transcriptional antiterminator Transcription 46908315 Common - lipoprotein, putative LMOf2365_2111 4 None None None 46906556 Common thiE thiamine-phosphate pyrophosphorylase LMOf2365_0336 203 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 46908449 Common - ABC transporter, ATP-binding protein LMOf2365_2248 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46907269 Common - hypothetical protein LMOf2365_1058 24 COG3739 COG3739, Uncharacterized integral membrane protein Function unknown 46907035 Pathogen - hypothetical protein LMOf2365_0821 1 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 46906983 Common - cell wall surface anchor family protein LMOf2365_0768 15 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906277 Common rpsR 30S ribosomal protein S18 LMOf2365_0055 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 46907241 Common - CBS domain protein LMOf2365_1030 10 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 46908765 Common - transcriptional regulator, MerR family LMOf2365_2566 130 COG0789 SoxR, Predicted transcriptional regulators Transcription 46907101 Common - hypothetical protein LMOf2365_0887 2 None None None 46908983 Common - ROK family protein LMOf2365_2784 157 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46906683 Pathogen - hypothetical protein LMOf2365_0465 1 None None None 46907809 Common pepQ proline dipeptidase LMOf2365_1600 247 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 46907031 Common - hypothetical protein LMOf2365_0817 3 COG4918 COG4918, Uncharacterized protein conserved in bacteria Function unknown 46908141 Common - hypothetical protein LMOf2365_1937 25 COG1694 MazG, Predicted pyrophosphatase General function prediction only 46908417 Common - iron compound ABC transporter, permease protein LMOf2365_2216 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 46908737 Common - biotin/lipoate A/B protein ligase family protein LMOf2365_2538 16 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 46907312 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_1101 69 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 46906431 Common prs-1 ribose-phosphate pyrophosphokinase LMOf2365_0210 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 46906377 Common - oligopeptide ABC transporter, permease protein LMOf2365_0155 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 46908733 Common - hypothetical protein LMOf2365_2534 4 COG4506 COG4506, Uncharacterized protein conserved in bacteria Function unknown 46906292 Common - hypothetical protein LMOf2365_0070 4 COG5417 COG5417, Uncharacterized small protein Function unknown 46908060 Common - hypothetical protein LMOf2365_1856 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 46906408 Common - glucose uptake protein LMOf2365_0187 12 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 46907296 Common - hypothetical protein LMOf2365_1085 1 None None None 46906400 Common - DNA replication intiation control protein YabA LMOf2365_0179 16 COG4467 COG4467, Uncharacterized protein conserved in bacteria Function unknown 46908237 Common - ABC transporter, permease protein, putative LMOf2365_2033 146 COG4209 LplB, ABC-type polysaccharide transport system, permease component Carbohydrate transport and metabolism 46906501 Common - ABC transporter, ATP-binding/permease protein LMOf2365_0280 232 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46906534 Pathogen - hypothetical protein LMOf2365_0313 1 None None None 46907661 Common - pyridine nucleotide-disulfide oxidoreductase family protein LMOf2365_1452 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 46906334 Common - hypothetical protein LMOf2365_0112 1 None None None 46908335 Common - transcriptional regulator, GntR family/aminotransferase family protein LMOf2365_2132 235 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 46908679 Common ftsE cell division ATP-binding protein FtsE LMOf2365_2480 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 46906461 Common lysS lysyl-tRNA synthetase LMOf2365_0240 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 46908277 Common mraW S-adenosyl-methyltransferase MraW LMOf2365_2073 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 46908648 Common mro aldose 1-epimerase LMOf2365_2449 88 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 46906808 Common hisF imidazoleglycerol phosphate synthase, cyclase subunit LMOf2365_0592 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 46906669 Common - hypothetical protein LMOf2365_0451 1 None None None 46907826 Common - GAF domain protein LMOf2365_1617 80 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 46908090 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_1886 123 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46906850 Common - hypothetical protein LMOf2365_0634 183 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 46908865 Common - cell division protein, FtsW/RodA/SpoVE family LMOf2365_2666 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 46907055 Common - transcriptional regulator, MerR family LMOf2365_0841 74 COG0789 SoxR, Predicted transcriptional regulators Transcription 46906825 Common - phospholipase/carboxylesterase family protein LMOf2365_0609 46 COG0400 COG0400, Predicted esterase General function prediction only 46907166 Common - hypothetical protein LMOf2365_0953 36 COG0398 COG0398, Uncharacterized conserved protein Function unknown 46908672 Common - histidine kinase LMOf2365_2473 223 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 46907292 Common - magnesium transporter, CorA family LMOf2365_1081 96 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 46907345 Common - acetyltransferase, GNAT family LMOf2365_1135 3 COG0456 RimI, Acetyltransferases General function prediction only 46907243 Common - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative LMOf2365_1032 140 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 46908474 Common - ABC transporter, ATP-binding protein LMOf2365_2273 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908631 Common pgk phosphoglycerate kinase LMOf2365_2431 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 46906868 Common - hypothetical protein LMOf2365_0652 1 None None None 46906447 Common - polysaccharide biosynthesis family protein LMOf2365_0226 35 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 46908432 Common trpS tryptophanyl-tRNA synthetase LMOf2365_2231 236 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46906621 Common ung-1 uracil-DNA glycosylase LMOf2365_0402 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 46907353 Common - hypothetical protein LMOf2365_1143 4 None None None 46908217 Common leuD isopropylmalate isomerase small subunit LMOf2365_2013 211 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 46908423 Common - CoiA-like family protein LMOf2365_2222 14 COG4469 CoiA, Competence protein General function prediction only 46908796 Common rpmC 50S ribosomal protein L29 LMOf2365_2597 160 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 46906789 Common srlA PTS system, glucitol/sorbitol-specific, IIC component LMOf2365_0573 22 COG3730 SrlA, Phosphotransferase system sorbitol-specific component IIC Carbohydrate transport and metabolism 46907341 Common - hypothetical protein LMOf2365_1131 1 None None None 46908034 Common ftsY cell division ABC transporter, substrate-binding protein FtsY LMOf2365_1830 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 46907817 Common ppnK inorganic polyphosphate/ATP-NAD kinase LMOf2365_1608 158 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 46908959 Common - bifunctional glutamate--cysteine ligase/glutathione synthetase LMOf2365_2760 96 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 46906324 Common - hypothetical protein LMOf2365_0102 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46907439 Common - hypothetical protein LMOf2365_1229 149 COG1733 COG1733, Predicted transcriptional regulators Transcription 46907142 Common - phosphoglycerate mutase family protein LMOf2365_0929 132 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46908222 Common deoC deoxyribose-phosphate aldolase LMOf2365_2018 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 46908407 Common - GGDEF domain protein LMOf2365_2206 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 46907476 Common - hypothetical protein LMOf2365_1267 48 COG1284 COG1284, Uncharacterized conserved protein Function unknown 46908242 Common - glycosyl hydrolase, family 38 LMOf2365_2038 52 COG0383 AMS1, Alpha-mannosidase Carbohydrate transport and metabolism 46908664 Common - hypothetical protein LMOf2365_2465 1 None None None 46908840 Common - ribulose-phosphate 3-epimerase family protein LMOf2365_2641 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 46906559 Common - hypothetical protein LMOf2365_0339 4 None None None 46908527 Common - hypothetical protein LMOf2365_2327 15 COG3247 HdeD, Uncharacterized conserved protein Function unknown 46906356 Common lmaC antigen C LMOf2365_0134 1 None None None 46909003 Common - transcriptional regulator, TetR family LMOf2365_2805 24 COG1309 AcrR, Transcriptional regulator Transcription 46906647 Common inlF internalin LMOf2365_0429 42 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46907828 Common tyrS tyrosyl-tRNA synthetase LMOf2365_1619 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46908440 Common - clpB protein LMOf2365_2239 220 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 46908359 Common - maltose/maltodextrin ABC transporter, permease protein LMOf2365_2157 144 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 46907605 Common - DNA-binding response regulator LMOf2365_1396 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46907741 Common - carbon-sulfur lyase LMOf2365_1532 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 46906716 Common - transposase OrfA, IS3 family, putative LMOf2365_0499 2 None None None 46907900 Common - MutT/nudix family protein LMOf2365_1693 9 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 46908642 Common - leucine rich repeat domain protein LMOf2365_2443 26 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908520 Common - acetyltransferase, GNAT family LMOf2365_2320 8 COG0456 RimI, Acetyltransferases General function prediction only 46907284 Common pdhA pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit LMOf2365_1073 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 46908367 Common - hypothetical protein LMOf2365_2165 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908666 Common - phosphate transport system protein PhoU LMOf2365_2467 201 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 46907467 Common - phosphoglycerate mutase family protein LMOf2365_1258 143 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46907189 Common nagB glucosamine-6-phosphate isomerase LMOf2365_0977 88 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 46908231 Common - transcriptional regulator, GntR family LMOf2365_2027 102 COG2188 PhnF, Transcriptional regulators Transcription 46907721 Common - peptidase, M3 family LMOf2365_1512 88 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 46907138 Pathogen - hypothetical protein LMOf2365_0925 1 None None None 46908783 Common - adenylate kinase LMOf2365_2584 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 46907099 Common - hypothetical protein LMOf2365_0885 1 None None None 46907547 Common - hypothetical protein LMOf2365_1338 172 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 46907083 Common - transcriptional regulator, TetR family LMOf2365_0869 99 COG1309 AcrR, Transcriptional regulator Transcription 46906744 Common - ribulose-phosphate 3-epimerase family protein LMOf2365_0528 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 46906960 Common - hypothetical protein LMOf2365_0745 1 None None None 46908350 Common - ABC transporter, ATP-binding protein LMOf2365_2147 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46907074 Common - cytochrome c oxidase, subunit IV, putative LMOf2365_0860 52 COG3326 COG3326, Predicted membrane protein Function unknown 46908871 Common tmk thymidylate kinase LMOf2365_2672 228 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 46907918 Common - hypothetical protein LMOf2365_1711 15 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 46907933 Common - glyoxalase family protein LMOf2365_1726 20 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46907384 Common pduQ propanol dehydrogenase LMOf2365_1174 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 46906468 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LMOf2365_0247 194 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 46908703 Common atpA-2 F0F1 ATP synthase subunit alpha LMOf2365_2504 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 46908657 Common - PspC domain protein, truncated LMOf2365_2458 44 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 46908266 Common - hypothetical protein LMOf2365_2062 55 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 46908903 Pathogen - hypothetical protein LMOf2365_2704 1 None None None 46906312 Common - hypothetical protein LMOf2365_0090 1 None None None 46908915 Common - hypothetical protein LMOf2365_2716 69 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 46906779 Common - hypothetical protein LMOf2365_0563 48 COG2848 COG2848, Uncharacterized conserved protein Function unknown 46908676 Common - peptidase, M48 family LMOf2365_2477 185 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 46908249 Common divIVA cell division protein DivIVA LMOf2365_2045 35 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 46906799 Common - alcohol dehydrogenase, iron-dependent LMOf2365_0583 168 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 46907692 Common dgkA diacylglycerol kinase LMOf2365_1483 50 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 46907386 Common - propionate/acetate kinase, putative LMOf2365_1176 162 COG0282 ackA, Acetate kinase Energy production and conversion 46907823 Common thiI thiamine biosynthesis protein ThiI LMOf2365_1614 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 46908638 Common - hypothetical protein LMOf2365_2439 8 COG4269 COG4269, Predicted membrane protein Function unknown 46907023 Common - hydrolase, carbon-nitrogen family LMOf2365_0809 198 COG0388 COG0388, Predicted amidohydrolase General function prediction only 46906257 Common - hypothetical protein LMOf2365_0035 2 None None None 46908899 Common acsA acetyl-coenzyme A synthetase LMOf2365_2700 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 46906804 Common - magnesium transporter, CorA family LMOf2365_0588 29 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 46906945 Common - hypothetical protein LMOf2365_0730 2 None None None 46906821 Common - hypothetical protein LMOf2365_0605 6 None None None 46907114 Common - hypothetical protein LMOf2365_0900 1 None None None 46909040 Common - hypothetical protein LMOf2365_2842 35 COG4405 COG4405, Uncharacterized protein conserved in bacteria Function unknown 46907277 Common moaD molybdenum cofactor biosynthesis protein D LMOf2365_1066 4 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 46907492 Common - hypothetical protein LMOf2365_1283 4 None None None 46907642 Common - acetyl-CoA acetyltransferase LMOf2365_1433 186 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 46907047 Common - hypothetical protein LMOf2365_0833 2 None None None 46908586 Common sufC SUF system FeS assembly ATPase LMOf2365_2386 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 46907448 Common - hypothetical protein LMOf2365_1238 10 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 46907958 Common - hypothetical protein LMOf2365_1752 40 COG3459 COG3459, Cellobiose phosphorylase Carbohydrate transport and metabolism 46906346 Common - ROK family protein LMOf2365_0124 113 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46908422 Common pepF oligoendopeptidase F LMOf2365_2221 82 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 46906355 Common lmaD antigen D LMOf2365_0133 1 None None None 46908154 Common - hypothetical protein LMOf2365_1950 8 COG5582 COG5582, Uncharacterized conserved protein Function unknown 46907540 Common frr ribosome recycling factor LMOf2365_1331 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 46907259 Common - metallo-beta-lactamase family protein LMOf2365_1048 158 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 46908127 Common nth endonuclease III LMOf2365_1923 240 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 46906419 Common - primase-related protein LMOf2365_0198 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 46907403 Common - hypothetical protein LMOf2365_1193 3 None None None 46907913 Common - major facilitator family transporter LMOf2365_1706 141 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907663 Common dapA dihydrodipicolinate synthase LMOf2365_1454 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 46907887 Common rpsB 30S ribosomal protein S2 LMOf2365_1679 241 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 46908763 Common - N-acetylmuramoyl-L-alanine amidase, family 4 LMOf2365_2564 68 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 46907943 Common - major facilitator family transporter LMOf2365_1736 98 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 46906702 Common - peptidase, putative LMOf2365_0485 96 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 46906709 Pathogen - hypothetical protein LMOf2365_0492 1 None None None 46906831 Common - hypothetical protein LMOf2365_0615 8 None None None 46908297 Common - copper resistance domain protein LMOf2365_2093 46 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 46908290 Common - hypothetical protein LMOf2365_2086 7 COG3679 COG3679, Uncharacterized conserved protein Function unknown 46906734 Common - transcriptional regulator, LysR family LMOf2365_0518 190 COG0583 LysR, Transcriptional regulator Transcription 46908560 Common - hypothetical protein LMOf2365_2360 28 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 46908258 Common - hypothetical protein LMOf2365_2054 2 None None None 46908486 Common - hydrolase, haloacid dehalogenase-like family LMOf2365_2286 183 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 46907102 Common - hypothetical protein LMOf2365_0888 52 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 46906967 Common fliI flagellum-specific ATP synthase LMOf2365_0752 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 46908505 Common - PTS system, fructose-specific, IIABC component LMOf2365_2305 142 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 46908455 Common - hypothetical protein LMOf2365_2254 49 COG4717 COG4717, Uncharacterized conserved protein Function unknown 46907063 Common - transposase OrfA, IS3 family, putative LMOf2365_0849 8 None None None 46907683 Common dnaG DNA primase LMOf2365_1474 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 46907184 Common - hypothetical protein LMOf2365_0972 2 None None None 46908944 Common recQ ATP-dependent DNA helicase RecQ LMOf2365_2745 231 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 46908467 Common - transcriptional regulator, LysR family LMOf2365_2266 192 COG0583 LysR, Transcriptional regulator Transcription 46908941 Common - D-alanyl-D-alanine carboxypeptidase LMOf2365_2742 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 46908007 Common - HD domain protein LMOf2365_1802 61 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 46906389 Common - zinc ABC transporter, zinc-binding protein LMOf2365_0168 177 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 46907376 Common - propanediol utilization protein PduK, putative LMOf2365_1166 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46907004 Common - hypothetical protein LMOf2365_0789 1 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 46908208 Common - hypothetical protein LMOf2365_2004 2 None None None 46908816 Common - hypothetical protein LMOf2365_2617 18 COG4821 COG4821, Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain General function prediction only 46908005 Common purE phosphoribosylaminoimidazole carboxylase catalytic subunit LMOf2365_1800 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 46908209 Common - acetyltransferase, GNAT family LMOf2365_2005 29 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46908570 Common - cell wall surface anchor family protein LMOf2365_2370 60 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46908925 Common - NAD-dependent deacetylase LMOf2365_2726 151 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 46907909 Common - bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein LMOf2365_1702 185 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 46908849 Common - hypothetical protein LMOf2365_2650 24 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 46908600 Common - iron compound ABC transporter, ATP-binding protein LMOf2365_2400 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 46908608 Pathogen - hypothetical protein LMOf2365_2408 1 None None None 46906320 Pathogen - hypothetical protein LMOf2365_0098 1 None None None 46907881 Common - hypothetical protein LMOf2365_1673 1 None None None 46906242 Common qoxD quinol oxidase AA3, subunit IV LMOf2365_0019 9 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 46908599 Common - cell division protein, FtsW/RodA/SpoVE family LMOf2365_2399 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 46907028 Common - transcriptional regulator, MarR family LMOf2365_0814 1 COG1846 MarR, Transcriptional regulators Transcription 46907216 Common bsaA glutathione peroxidase LMOf2365_1004 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 46908856 Common - hydrolase, alpha/beta fold family LMOf2365_2657 98 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 46907174 Common - histidine kinase domain protein LMOf2365_0962 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 46907361 Common pduU propanediol utilization protein PduU LMOf2365_1151 20 COG4810 EutS, Ethanolamine utilization protein Amino acid transport and metabolism 46908826 Common - ABC transporter, ATP-binding protein LMOf2365_2627 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46906817 Common - hypothetical protein LMOf2365_0601 7 None None None 46906391 Common zurM-1 zinc ABC transporter, permease protein LMOf2365_0170 185 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 46908833 Common rpsG 30S ribosomal protein S7 LMOf2365_2634 247 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 46907318 Common nadE NAD synthetase LMOf2365_1107 158 COG0171 NadE, NAD synthase Coenzyme metabolism 46907867 Common - ABC transporter, permease protein, putative LMOf2365_1659 8 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 46907636 Common - transcriptional regulator, PadR family LMOf2365_1427 30 COG1695 COG1695, Predicted transcriptional regulators Transcription 46907951 Common - PTS system, beta-glucoside-specific, IIB component LMOf2365_1744 30 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 46908708 Common atpI ATP synthase protein I LMOf2365_2509 4 None None None 46906976 Common - hypothetical protein LMOf2365_0761 1 None None None 46908099 Common ppdK pyruvate phosphate dikinase LMOf2365_1896 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 46907408 Common - transcriptional regulator, AraC family LMOf2365_1198 116 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 46908489 Common - intracellular protease, PfpI family LMOf2365_2289 151 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 46907125 Common - anti-sigma factor antagonist LMOf2365_0912 45 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46908775 Common - acetamidase/formamidase family protein LMOf2365_2576 45 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 46907991 Common - sodium:neurotransmitter symporter family protein LMOf2365_1786 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 46907393 Common - sensor histidine kinase LMOf2365_1183 100 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 46907849 Common dat D-amino acid aminotransferase LMOf2365_1641 189 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 46908567 Common - hypothetical protein LMOf2365_2367 5 COG4837 COG4837, Uncharacterized protein conserved in bacteria Function unknown 46907837 Common - FtsK/SpoIIIE family protein LMOf2365_1628 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 46906287 Common purA adenylosuccinate synthetase LMOf2365_0065 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 46908404 Common - major facilitator family transporter LMOf2365_2203 80 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 46906873 Common - hypothetical protein LMOf2365_0657 1 None None None 46906672 Common - hypothetical protein LMOf2365_0454 1 None None None 46908540 Common - general stress protein 13 LMOf2365_2340 241 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 46908668 Common - phosphate ABC transporter, ATP-binding protein LMOf2365_2469 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 46908756 Common - hypothetical protein LMOf2365_2557 4 COG2427 COG2427, Uncharacterized conserved protein Function unknown 46907604 Common gnd 6-phosphogluconate dehydrogenase LMOf2365_1395 187 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 46908078 Common - multidrug efflux protein LMOf2365_1874 166 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 46907551 Common infB translation initiation factor IF-2 LMOf2365_1342 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 46906410 Common - xylose repressor protein LMOf2365_0189 152 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46908590 Common - ABC transporter, ATP-binding protein LMOf2365_2390 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 46907324 Common - ABC transporter, ATP-binding protein LMOf2365_1113 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908435 Common fabF beta-ketoacyl-acyl carrier protein synthase II LMOf2365_2234 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 46906679 Pathogen - hypothetical protein LMOf2365_0461 1 None None None 46906726 Common - conserved hypothetical protein TIGR00048 LMOf2365_0509 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 46907790 Pathogen - hypothetical protein LMOf2365_1581 1 None None None 46908321 Common - DNA-binding protein LMOf2365_2118 6 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 46908547 Common - hypothetical protein LMOf2365_2347 18 None None None 46906367 Common - hypothetical protein LMOf2365_0145 1 None None None 46906514 Common - acetyltransferase, GNAT family LMOf2365_0293 11 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46908340 Common feoB ferrous iron transport protein B LMOf2365_2137 154 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 46908043 Common recG ATP-dependent DNA helicase RecG LMOf2365_1839 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 46908050 Common rpe-2 ribulose-phosphate 3-epimerase LMOf2365_1846 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 46907525 Common glnR transcriptional repressor GlnR LMOf2365_1316 60 COG0789 SoxR, Predicted transcriptional regulators Transcription 46907505 Common hslV ATP-dependent protease peptidase subunit LMOf2365_1296 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 46906238 Pathogen - hypothetical protein LMOf2365_0014 1 None None None 46908927 Common - major facilitator family transporter LMOf2365_2728 141 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907302 Common - techoic acid ABC transporter, efflux permease LMOf2365_1091 145 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 46908282 Common rpmF 50S ribosomal protein L32 LMOf2365_2078 24 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 46907398 Common - ethanolamine utilization protein, putative LMOf2365_1188 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46907671 Common - hypothetical protein LMOf2365_1462 15 COG4392 COG4392, Predicted membrane protein Function unknown 46907865 Common - hypothetical protein LMOf2365_1657 52 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 46908384 Common - hypothetical protein LMOf2365_2183 15 COG1694 MazG, Predicted pyrophosphatase General function prediction only 46907309 Common - hypothetical protein LMOf2365_1098 1 None None None 46908744 Common - hypothetical protein LMOf2365_2545 68 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 46906887 Common cadA cadmium-translocating P-type ATPase LMOf2365_0672 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 46908161 Common aroC chorismate synthase LMOf2365_1957 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 46909020 Common - beta-phosphoglucomutase LMOf2365_2822 157 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 46907953 Common - hypothetical protein LMOf2365_1747 1 None None None 46906278 Common - lipoprotein, putative LMOf2365_0056 9 COG3212 COG3212, Predicted membrane protein Function unknown 46907921 Common - hypothetical protein LMOf2365_1714 23 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 46908883 Common dnaX DNA polymerase III, gamma and tau subunits LMOf2365_2684 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 46906495 Common rpoB DNA-directed RNA polymerase subunit beta LMOf2365_0274 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 46909036 Common rhaA L-rhamnose isomerase LMOf2365_2838 23 COG4806 RhaA, L-rhamnose isomerase Carbohydrate transport and metabolism 46907559 Common - hypothetical protein LMOf2365_1350 4 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 46907718 Common aroE-2 shikimate 5-dehydrogenase LMOf2365_1509 226 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 46907854 Common - polysaccharide biosynthesis family protein LMOf2365_1646 61 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 46907712 Common - DNA-binding protein, ComEA family LMOf2365_1503 121 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 46907299 Common - cell division protein, FtsW/RodA/SpoVE family LMOf2365_1088 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 46906513 Common - hydrolase, haloacid dehalogenase-like family LMOf2365_0292 147 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46908620 Common - transcriptional activator, putative LMOf2365_2420 7 None None None 46908877 Common - Cof-like hydrolase LMOf2365_2678 131 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46907926 Common - hypothetical protein LMOf2365_1719 66 COG2898 COG2898, Uncharacterized conserved protein Function unknown 46906905 Common - endonuclease III domain protein LMOf2365_0690 74 COG2231 COG2231, Uncharacterized protein related to Endonuclease III DNA replication, recombination, and repair 46906732 Common rpmF 50S ribosomal protein L32 LMOf2365_0516 82 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 46908913 Common - hypothetical protein LMOf2365_2714 13 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 46907898 Common - lactate/malate dehydrogenase family protein LMOf2365_1691 157 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 46908728 Common - putative lipid kinase LMOf2365_2529 119 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 46906757 Common - hypothetical protein LMOf2365_0541 11 None None None 46907043 Common scrK fructokinase LMOf2365_0829 128 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46907768 Common rpmA 50S ribosomal protein L27 LMOf2365_1559 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 46906772 Common - hypothetical protein LMOf2365_0556 6 None None None 46906913 Common - Cof-like hydrolase LMOf2365_0697 125 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46907709 Common holA DNA polymerase III subunit delta LMOf2365_1500 115 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 46907416 Common cobM precorrin-4 C11-methyltransferase LMOf2365_1206 202 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 46907576 Common gcvP2 glycine dehydrogenase subunit 2 LMOf2365_1367 173 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 46906927 Common fliP flagellar biosynthesis protein FliP LMOf2365_0712 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 46907719 Common - GTPase, putative LMOf2365_1510 72 COG1161 COG1161, Predicted GTPases General function prediction only 46906309 Common - hypothetical protein LMOf2365_0087 1 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 46908863 Common - PTS system, beta-glucoside-specific, IIC component LMOf2365_2664 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908148 Common sfcA NADP-dependent malic enzyme LMOf2365_1944 58 COG0281 SfcA, Malic enzyme Energy production and conversion 46907221 Common - transcriptional regulator, MarR family LMOf2365_1010 27 COG1846 MarR, Transcriptional regulators Transcription 46909033 Common - major facilitator family transporter LMOf2365_2835 232 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908715 Common prfA peptide chain release factor 1 LMOf2365_2516 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 46908994 Common - hypothetical protein LMOf2365_2795 2 None None None 46908117 Common xpt xanthine phosphoribosyltransferase LMOf2365_1914 77 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 46906900 Common - hypothetical protein LMOf2365_0685 1 None None None 46907592 Common - hemolysin A LMOf2365_1383 132 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 46908107 Common thyA thymidylate synthase LMOf2365_1904 145 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 46908517 Common - amino acid ABC transporter, permease protein LMOf2365_2317 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 46908578 Common - hypothetical protein LMOf2365_2378 75 COG0730 COG0730, Predicted permeases General function prediction only 46907657 Common - hypothetical protein LMOf2365_1448 11 COG3859 COG3859, Predicted membrane protein Function unknown 46908624 Common secG preprotein translocase subunit SecG LMOf2365_2424 5 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 46908420 Common - hypothetical protein LMOf2365_2219 5 COG5386 COG5386, Cell surface protein Cell envelope biogenesis, outer membrane 46908059 Common - guanylate kinase family protein LMOf2365_1855 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 46908853 Common rpiB-4 ribose-5-phosphate isomerase B LMOf2365_2654 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 46907770 Common rplU 50S ribosomal protein L21 LMOf2365_1561 201 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 46908938 Common - ABC transporter, ATP-binding/permease protein LMOf2365_2739 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46908985 Common - hydrolase, haloacid dehalogenase-like family LMOf2365_2786 201 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 46906694 Pathogen - hypothetical protein LMOf2365_0477 1 None None None 46907685 Common - hypothetical protein LMOf2365_1476 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 46907535 Common - ParB-like nuclease domain protein LMOf2365_1326 17 COG1475 Spo0J, Predicted transcriptional regulators Transcription 46907678 Common - ATP-dependent RNA helicase, putative LMOf2365_1469 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 46906498 Common - glycosyl hydrolase, family 1 LMOf2365_0277 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46907257 Common - hypothetical protein LMOf2365_1046 3 COG1289 COG1289, Predicted membrane protein Function unknown 46907515 Common luxS S-ribosylhomocysteinase LMOf2365_1306 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 46907775 Common mreC rod shape-determining protein MreC LMOf2365_1566 156 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 46907586 Common folD methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase LMOf2365_1377 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 46907378 Common - propanediol utilization protein PduL LMOf2365_1168 36 COG4869 PduL, Propanediol utilization protein Secondary metabolites biosynthesis, transport, and catabolism 46908614 Common - hypothetical protein LMOf2365_2414 82 COG1434 COG1434, Uncharacterized conserved protein Function unknown 46908137 Common birA birA bifunctional protein LMOf2365_1933 227 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 46907569 Common - ATP-binding protein LMOf2365_1360 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 46907598 Common - 2-oxoisovalerate dehydrogenase E1 component, alpha subunit LMOf2365_1389 155 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 46908317 Common - CrcB protein, putative LMOf2365_2113 188 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 46906797 Common - hypothetical protein LMOf2365_0581 8 None None None 46907740 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase LMOf2365_1531 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 46907057 Common - hypothetical protein LMOf2365_0843 19 None None None 46906718 Pathogen - hypothetical protein LMOf2365_0501 1 None None None 46907164 Common - hypothetical protein LMOf2365_0951 68 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 46907747 Common aspS aspartyl-tRNA synthetase LMOf2365_1538 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46908196 Common - transcriptional regulator, TetR family LMOf2365_1992 87 COG1309 AcrR, Transcriptional regulator Transcription 46907873 Common - helicase, Snf2 family LMOf2365_1665 147 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 46907972 Common ade adenine deaminase LMOf2365_1767 110 COG1001 AdeC, Adenine deaminase Nucleotide transport and metabolism 46908304 Common groES co-chaperonin GroES LMOf2365_2100 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 46906337 Common - PTS system, mannose/fructose/sorbose family, IID component LMOf2365_0115 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 46908062 Common - short chain dehydrogenase LMOf2365_1858 57 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46906267 Common argF-1 putrescine carbamoyltransferase LMOf2365_0045 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 46906603 Common - MutT/nudix family protein LMOf2365_0384 41 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 46906290 Common - hypothetical protein LMOf2365_0068 24 COG1511 COG1511, Predicted membrane protein Function unknown 46906843 Common - BioY family protein LMOf2365_0627 111 COG1268 BioY, Uncharacterized conserved protein General function prediction only 46907979 Common aroK shikimate kinase LMOf2365_1774 201 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 46908330 Common - carbohydrate kinase, PfkB family LMOf2365_2127 117 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 46906275 Common rpsF 30S ribosomal protein S6 LMOf2365_0053 199 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 46907294 Common - inositol monophosphatase family protein LMOf2365_1083 206 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 46908214 Common leuA 2-isopropylmalate synthase LMOf2365_2010 216 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 46906895 Common - transcriptional regulator, GntR family LMOf2365_0680 72 COG1802 GntR, Transcriptional regulators Transcription 46906507 Common - glyoxalase family protein LMOf2365_0286 40 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 46906521 Common nrdG anaerobic ribonucleoside-triphosphate reductase activating protein LMOf2365_0300 60 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 46908537 Common - transcriptional regulator, DeoR family LMOf2365_2337 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 46907795 Common mutM formamidopyrimidine-DNA glycosylase LMOf2365_1586 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 46908097 Common - CBS domain protein LMOf2365_1894 68 COG0517 COG0517, FOG: CBS domain General function prediction only 46907455 Common - hypothetical protein LMOf2365_1245 7 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 46908264 Common - S4 domain protein LMOf2365_2060 31 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 46906806 Common hisE phosphoribosyl-ATP pyrophosphatase LMOf2365_0590 180 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 46907485 Common proA gamma-glutamyl phosphate reductase LMOf2365_1276 191 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 46907205 Common dltB DltB protein LMOf2365_0993 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 46906406 Common - hypothetical protein LMOf2365_0185 40 COG5361 COG5361, Uncharacterized conserved protein Function unknown 46908670 Common - phosphate ABC transporter, permease protein LMOf2365_2471 227 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 46907471 Common - MutT/nudix family protein LMOf2365_1262 24 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 46908361 Common - maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein LMOf2365_2159 86 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 46906547 Common - C-5 cytosine-specific DNA methylase family protein LMOf2365_0327 86 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 46908279 Common - hypothetical protein LMOf2365_2075 119 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907494 Pathogen - hypothetical protein LMOf2365_1285 1 None None None 46908328 Common - hypothetical protein LMOf2365_2125 1 None None None 46908558 Common - thioesterase family protein LMOf2365_2358 101 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 46906953 Common - hypothetical protein LMOf2365_0738 1 None None None 46908337 Common - glutamine amidotransferase, SNO family LMOf2365_2134 85 COG0311 PDX2, Predicted glutamine amidotransferase involved in pyridoxine biosynthesis Coenzyme metabolism 46906935 Common - hypothetical protein LMOf2365_0720 2 None None None 46908964 Common - ABC transporter, ATP-binding protein LMOf2365_2765 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46906985 Common - hypothetical protein LMOf2365_0770 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46909029 Common - sucrose phosphorylase LMOf2365_2831 135 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46906399 Common - hypothetical protein LMOf2365_0178 58 COG1774 COG1774, Uncharacterized homolog of PSP1 Function unknown 46908677 Common - NLP/P60 family protein LMOf2365_2478 138 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 46908800 Common rpsS 30S ribosomal protein S19 LMOf2365_2601 237 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 46906866 Common - hypothetical protein LMOf2365_0650 4 COG0730 COG0730, Predicted permeases General function prediction only 46906995 Common - ABC transporter, ATP-binding protein LMOf2365_0780 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908378 Common - hypothetical protein LMOf2365_2177 14 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 46908843 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_2644 208 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 46908395 Common - hypothetical protein LMOf2365_2194 40 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 46906331 Common atpD-1 F0F1 ATP synthase subunit beta LMOf2365_0109 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 46908347 Common - nitroreductase family protein LMOf2365_2144 91 COG0778 NfnB, Nitroreductase Energy production and conversion 46906630 Common - hypothetical protein LMOf2365_0411 1 None None None 46906618 Common - hypothetical protein LMOf2365_0399 13 COG5646 COG5646, Uncharacterized conserved protein Function unknown 46909042 Common - SpoJ protein LMOf2365_2844 212 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 46906664 Common - transcriptional regulator, LysR family LMOf2365_0446 179 COG0583 LysR, Transcriptional regulator Transcription 46906457 Common folP dihydropteroate synthase LMOf2365_0236 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 46906370 Common - Ser/Thr protein phosphatase family protein LMOf2365_0148 120 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 46907011 Common - hypothetical protein LMOf2365_0796 1 None None None 46906527 Common - transaminase LMOf2365_0306 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 46907156 Common - hypothetical protein LMOf2365_0943 10 COG3689 COG3689, Predicted membrane protein Function unknown 46907290 Common - hypothetical protein LMOf2365_1079 11 COG4476 COG4476, Uncharacterized protein conserved in bacteria Function unknown 46907212 Common - ABC transporter, ATP-binding protein LMOf2365_1000 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908931 Common - ABC transporter, ATP-binding/permease protein LMOf2365_2732 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46906597 Common - oxidoreductase, YhhX family LMOf2365_0377 165 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46907621 Common - peptidase, M16 family LMOf2365_1412 183 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 46907706 Common - transcriptional regulator, MerR family LMOf2365_1497 91 COG0789 SoxR, Predicted transcriptional regulators Transcription 46906270 Common arcC carbamate kinase LMOf2365_0048 67 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 46909023 Common - oxidoreductase, Gfo/Idh/MocA family LMOf2365_2825 179 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 46907161 Common - sulfatase family protein LMOf2365_0948 58 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 46906433 Common plcA 1-phosphatidylinositol phosphodiesterase LMOf2365_0212 8 None None None 46906282 Common agrA accessory gene regulator protein A LMOf2365_0060 33 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 46908289 Common - hypothetical protein LMOf2365_2085 11 COG4471 COG4471, Uncharacterized protein conserved in bacteria Function unknown 46908310 Common - hypothetical protein LMOf2365_2106 50 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 46906450 Common - hypothetical protein LMOf2365_0229 230 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 46907191 Common - llm protein LMOf2365_0979 229 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 46908272 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase LMOf2365_2068 210 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 46907200 Common ppnK inorganic polyphosphate/ATP-NAD kinase LMOf2365_0988 229 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 46908510 Common - indigoidine synthase A-like protein LMOf2365_2310 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 46908257 Pathogen - hypothetical protein LMOf2365_2053 1 None None None 46907878 Common - hypothetical protein LMOf2365_1670 6 COG4846 CcdC, Membrane protein involved in cytochrome C biogenesis Posttranslational modification, protein turnover, chaperones 46907178 Common - hypothetical protein LMOf2365_0966 2 None None None 46908785 Common rplO 50S ribosomal protein L15 LMOf2365_2586 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 46908496 Common - HAD-superfamily hydrolase, subfamily IIB LMOf2365_2296 123 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46907732 Common alaS alanyl-tRNA synthetase LMOf2365_1523 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46906686 Common - PBS lyase HEAT-like repeat domain protein LMOf2365_0468 7 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 46908693 Common - teichoic acid biosynthesis protein A LMOf2365_2494 110 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 46906851 Common - transcriptional regulator, MarR family LMOf2365_0635 67 COG1846 MarR, Transcriptional regulators Transcription 46906634 Common - hypothetical protein LMOf2365_0415 28 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 46906481 Common rplK 50S ribosomal protein L11 LMOf2365_0260 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 46906670 Common - hypothetical protein LMOf2365_0452 1 None None None 46906765 Common - hypothetical protein LMOf2365_0549 55 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46906321 Pathogen - hypothetical protein LMOf2365_0099 1 None None None 46906898 Common - acetyltransferase, GNAT family LMOf2365_0683 12 None None None 46907533 Common - hypothetical protein LMOf2365_1324 7 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 46907076 Common - vitamin-B12 independent methionine synthase family protein LMOf2365_0862 58 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 46907860 Common trpC indole-3-glycerol-phosphate synthase LMOf2365_1652 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 46907059 Common - Na/Pi-cotransporter family protein LMOf2365_0845 138 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 46908294 Common - ion transport protein, putative LMOf2365_2090 104 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 46908943 Common topB DNA topoisomerase III LMOf2365_2744 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 46906874 Common - hydrolase, isochorismatase family LMOf2365_0658 75 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 46907575 Common gcvP1 glycine dehydrogenase subunit 1 LMOf2365_1366 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 46907727 Common - conserved hypothetical protein TIGR00247 LMOf2365_1518 186 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 46908583 Common - NifU family protein LMOf2365_2383 178 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 46906368 Common - holin, putative LMOf2365_0146 12 COG4824 COG4824, Phage-related holin (Lysis protein) General function prediction only 46909007 Common - major facilitator family transporter LMOf2365_2809 177 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 46906344 Common - hypothetical protein LMOf2365_0122 2 None None None 46906790 Common - hypothetical protein LMOf2365_0574 2 COG4578 GutM, Glucitol operon activator Transcription 46908750 Common - hypothetical protein LMOf2365_2551 21 COG1359 COG1359, Uncharacterized conserved protein Function unknown 46908503 Common - transcription regulator LMOf2365_2303 5 COG4903 ComK, Genetic competence transcription factor Transcription 46908602 Common - iron compound ABC transporter, iron compound-binding protein, putative LMOf2365_2402 154 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 46907390 Pathogen - hypothetical protein LMOf2365_1180 1 None None None 46907746 Common - hypothetical protein LMOf2365_1537 1 None None None 46907013 Common - mannose-specific PTS system protein IID LMOf2365_0798 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 46908790 Common rpsH 30S ribosomal protein S8 LMOf2365_2591 249 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 46908589 Common - ABC transporter, permease protein LMOf2365_2389 125 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 46907278 Common moaC molybdenum cofactor biosynthesis protein C LMOf2365_1067 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 46906358 Common lmaA antigen A LMOf2365_0136 5 COG5437 COG5437, Predicted secreted protein Function unknown 46906383 Pathogen - hypothetical protein LMOf2365_0162 1 None None None 46908950 Common - glycosyl hydrolase, family 1 LMOf2365_2751 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46908846 Common - PTS system, IIA component LMOf2365_2647 22 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46907754 Common - hypothetical protein LMOf2365_1545 3 COG5416 COG5416, Uncharacterized integral membrane protein Function unknown 46907407 Common - hypothetical protein LMOf2365_1197 20 COG4766 EutQ, Ethanolamine utilization protein Amino acid transport and metabolism 46907914 Common - peroxide operon transcriptional regulator LMOf2365_1707 206 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 46907811 Common - universal stress protein family LMOf2365_1602 142 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 46906914 Common - acetyltransferase, CysE/LacA/LpxA/NodL family LMOf2365_0698 102 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 46906974 Common - methyl-accepting chemotaxis protein, putative LMOf2365_0759 165 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 46906440 Common - hypothetical protein LMOf2365_0219 101 COG0393 COG0393, Uncharacterized conserved protein Function unknown 46906564 Common - transcriptional activator, putative LMOf2365_0344 6 None None None 46906910 Common - cell wall surface anchor family protein LMOf2365_0694 5 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46906623 Common - hypothetical protein LMOf2365_0404 18 COG4864 COG4864, Uncharacterized protein conserved in bacteria Function unknown 46907388 Common - propanediol utilization protein PduX LMOf2365_1178 17 COG4542 PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase Secondary metabolites biosynthesis, transport, and catabolism 46908808 Common - thiamine biosynthesis lipoprotein ApbE, putative LMOf2365_2609 134 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 46907646 Common - type I phosphodiesterase/nucleotide pyrophosphatase family protein LMOf2365_1437 37 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 46906640 Common - PRD/PTS system IIA 2 domain protein LMOf2365_0422 36 COG3711 BglG, Transcriptional antiterminator Transcription 46907042 Common - HD domain protein LMOf2365_0828 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 46906424 Common purR purine operon repressor LMOf2365_0203 129 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 46907720 Common - hypothetical protein LMOf2365_1511 42 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 46908083 Common - carboxypeptidase family protein LMOf2365_1879 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 46907486 Common proB gamma-glutamyl kinase LMOf2365_1277 194 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 46908377 Common - transcriptional regulator, GntR family LMOf2365_2176 131 COG2188 PhnF, Transcriptional regulators Transcription 46906588 Common - dihydroxyacetone kinase LMOf2365_0368 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 46907666 Common - penicillin-binding protein LMOf2365_1457 199 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 46906539 Common - PRD/PTS system IIA 2 domain protein LMOf2365_0318 43 COG3711 BglG, Transcriptional antiterminator Transcription 46908070 Common pyrB aspartate carbamoyltransferase catalytic subunit LMOf2365_1866 239 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 46907362 Common - propanediol utilization protein PduV LMOf2365_1152 20 COG4917 EutP, Ethanolamine utilization protein Amino acid transport and metabolism 46908096 Common hlY-III hemolysin III LMOf2365_1893 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 46907232 Common - phytoene dehydrogenase, putative LMOf2365_1021 76 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 46907938 Common - hypothetical protein LMOf2365_1731 4 COG4840 COG4840, Uncharacterized protein conserved in bacteria Function unknown 46906620 Common - hypothetical protein LMOf2365_0401 30 COG4292 COG4292, Predicted membrane protein Function unknown 46908306 Common - CAAX amino terminal protease family protein LMOf2365_2102 39 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 46906658 Common - sugar transporter, putative LMOf2365_0440 11 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 46907113 Common - lysM domain protein LMOf2365_0899 19 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46907049 Common - hypothetical protein LMOf2365_0835 3 None None None 46908528 Common - glucosamine-6-phosphate isomerase, putative LMOf2365_2328 81 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 46907065 Common - hypothetical protein LMOf2365_0851 2 None None None 46908077 Common - hypothetical protein LMOf2365_1873 141 COG2252 COG2252, Permeases General function prediction only 46907104 Common - hypothetical protein LMOf2365_0890 127 COG1733 COG1733, Predicted transcriptional regulators Transcription 46909032 Common - acetyltransferase, GNAT family LMOf2365_2834 154 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46906781 Common - glycosyl hydrolase, family 4 LMOf2365_0565 53 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 46908563 Common - pyridine nucleotide-disulfide oxidoreductase family protein LMOf2365_2363 205 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 46907637 Common - major facilitator family transporter LMOf2365_1428 207 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907186 Common - hypothetical protein LMOf2365_0974 1 None None None 46907885 Pathogen - hypothetical protein LMOf2365_1677 1 None None None 46908898 Common - cytidine/deoxycytidylate deaminase family protein LMOf2365_2699 219 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 46908453 Common prsA-2 protein export protein LMOf2365_2252 159 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 46908053 Common - serine/threonine protein phosphatase family protein LMOf2365_1849 136 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 46906553 Common - TENA/THI-4 family protein LMOf2365_0333 66 COG0819 TenA, Putative transcription activator Transcription 46907323 Pathogen - hypothetical protein LMOf2365_1112 1 None None None 46908183 Common rluB ribosomal large subunit pseudouridine synthase B LMOf2365_1979 205 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 46909005 Common - major facilitator family transporter LMOf2365_2807 91 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 46907904 Common menB naphthoate synthase LMOf2365_1697 178 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 46907335 Common - hypothetical protein LMOf2365_1125 1 None None None 46906315 Common ada Ada regulatory protein LMOf2365_0093 194 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 46906476 Common sigH RNA polymerase factor sigma-70 LMOf2365_0255 43 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 46907436 Common - peptidase, putative LMOf2365_1226 90 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 46907286 Common - dihydrolipoamide acetyltransferase LMOf2365_1075 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 46906478 Common secE preprotein translocase subunit SecE LMOf2365_0257 1 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 46908789 Common rplF 50S ribosomal protein L6 LMOf2365_2590 239 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 46907381 Common pduN propanediol utilization: polyhedral bodies LMOf2365_1171 36 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46907139 Common - hypothetical protein LMOf2365_0926 5 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 46907025 Common - hypothetical protein LMOf2365_0811 58 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 46908369 Common - hypothetical protein LMOf2365_2167 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 46907937 Common - ribonuclease BN, putative LMOf2365_1730 137 COG1295 Rbn, Predicted membrane protein Function unknown 46907788 Common - GTPase EngB LMOf2365_1579 187 COG0218 COG0218, Predicted GTPase General function prediction only 46906255 Common - hypothetical protein LMOf2365_0032 2 None None None 46906775 Common - hypothetical protein LMOf2365_0559 7 None None None 46907211 Common ilvE branched-chain amino acid aminotransferase LMOf2365_0999 195 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 46907132 Common - hypothetical protein LMOf2365_0919 26 COG3236 COG3236, Uncharacterized protein conserved in bacteria Function unknown 46907818 Common argF-2 ornithine carbamoyltransferase LMOf2365_1609 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 46907144 Common - transcriptional regulator, GntR family LMOf2365_0931 87 COG1725 COG1725, Predicted transcriptional regulators Transcription 46908705 Common atpF ATP synthase F0, B subunit LMOf2365_2506 160 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 46907957 Common - transcriptional regulator, LacI family LMOf2365_1751 127 COG1609 PurR, Transcriptional regulators Transcription 46907690 Common era GTP-binding protein Era LMOf2365_1481 233 COG1159 Era, GTPase General function prediction only 46908905 Common - hypothetical protein LMOf2365_2706 1 None None None 46908727 Common - fructose-bisphosphate aldolase, putative LMOf2365_2528 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 46906746 Common - PTS system, IIA 2 domain protein LMOf2365_0530 40 COG3711 BglG, Transcriptional antiterminator Transcription 46908430 Common - oligopeptide ABC transporter, oligopeptide-binding protein LMOf2365_2229 190 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 46908890 Common - hypothetical protein LMOf2365_2691 1 None None None 46907931 Common - hypothetical protein LMOf2365_1724 1 None None None 46907869 Common tag DNA-3-methyladenine glycosylase I LMOf2365_1661 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 46906225 Common dnaA chromosomal replication initiation protein LMOf2365_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 46907097 Pathogen - hypothetical protein LMOf2365_0883 1 None None None 46907602 Common - peptidase, M20/M25/M40 family LMOf2365_1393 50 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 46906326 Common - hypothetical protein LMOf2365_0104 1 None None None 161611353 Common - succinyl-diaminopimelate desuccinylase LMOf2365_0284 228 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 46907738 Common - TPR domain protein LMOf2365_1529 132 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 46908901 Pathogen - hypothetical protein LMOf2365_2702 2 None None None 46908827 Pathogen - hypothetical protein LMOf2365_2628 1 None None None 46908919 Common - PTS system, fructose-specific, IIABC component LMOf2365_2720 73 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 46907470 Common - hypothetical protein LMOf2365_1261 1 None None None 46908954 Common - PTS system, IIA component LMOf2365_2755 31 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46908680 Common - YitT family protein LMOf2365_2481 55 COG1284 COG1284, Uncharacterized conserved protein Function unknown 46907479 Common treR trehalose operon transcriptional repressor LMOf2365_1270 111 COG2188 PhnF, Transcriptional regulators Transcription 46908032 Common ffh signal recognition particle protein LMOf2365_1828 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 46907570 Common - hypothetical protein LMOf2365_1361 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 46908633 Common - transcriptional regulator, putative LMOf2365_2433 52 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 46908912 Common - transcriptional regulator, MarR family LMOf2365_2713 105 COG1846 MarR, Transcriptional regulators Transcription 46908662 Common - hypothetical protein LMOf2365_2463 2 COG4897 CsbA, Uncharacterized protein conserved in bacteria Function unknown 46908244 Common - alpha-D-mannosidase LMOf2365_2040 54 COG0383 AMS1, Alpha-mannosidase Carbohydrate transport and metabolism 46908699 Common - hypothetical protein LMOf2365_2500 8 COG4836 COG4836, Predicted membrane protein Function unknown 46906786 Common - ABC transporter, substrate-binding protein LMOf2365_0570 63 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 46907355 Common - hypothetical protein LMOf2365_1145 7 COG4994 COG4994, Uncharacterized protein conserved in bacteria Function unknown 46906751 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_0535 215 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 46906824 Common - hypothetical protein LMOf2365_0608 11 COG4443 COG4443, Uncharacterized protein conserved in bacteria Function unknown 46907460 Pathogen - hypothetical protein LMOf2365_1251 1 None None None 46908471 Common - transporter, putative LMOf2365_2270 56 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908466 Common - CBS domain protein LMOf2365_2265 222 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 46907834 Common - peroxiredoxin, putative LMOf2365_1625 222 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 46906714 Pathogen - hypothetical protein LMOf2365_0497 1 None None None 46907001 Common - hypothetical protein LMOf2365_0786 210 COG2262 HflX, GTPases General function prediction only 46906291 Common - hypothetical protein LMOf2365_0069 1 None None None 46906736 Common aroE shikimate 5-dehydrogenase LMOf2365_0520 223 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 46908442 Common - hydrolase, haloacid dehalogenase-like family LMOf2365_2241 98 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46906298 Common - hypothetical protein LMOf2365_0076 2 None None None 46908841 Common rpiB-3 ribose 5-phosphate isomerase B LMOf2365_2642 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 46907409 Common - hypothetical protein LMOf2365_1199 10 None None None 46907755 Common secDF bifunctional preprotein translocase subunit SecD/SecF LMOf2365_1546 210 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 46907192 Common - peptidase, putative LMOf2365_0980 135 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 46908494 Common - hypothetical protein LMOf2365_2294 148 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 46906666 Common - oxidoreductase, short-chain dehydrogenase/reductase family LMOf2365_0448 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 46907169 Common - nitroreductase family protein LMOf2365_0957 71 COG0778 NfnB, Nitroreductase Energy production and conversion 46907481 Common treB PTS system, trehalose-specific, IIBC component LMOf2365_1272 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 46908782 Common infA translation initiation factor IF-1 LMOf2365_2583 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 46906902 Common - hypothetical protein LMOf2365_0687 24 COG4694 COG4694, Uncharacterized protein conserved in bacteria Function unknown 46907176 Common - hypothetical protein LMOf2365_0964 7 COG4841 COG4841, Uncharacterized protein conserved in bacteria Function unknown 46908825 Pathogen - hypothetical protein LMOf2365_2626 1 None None None 46906687 Pathogen - hypothetical protein LMOf2365_0469 1 None None None 46907623 Common - hypothetical protein LMOf2365_1414 73 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 46907870 Common acnA aconitate hydratase LMOf2365_1662 222 COG1048 AcnA, Aconitase A Energy production and conversion 46907643 Common mvaS hydroxymethylglutaryl-CoA synthase LMOf2365_1434 59 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 46908393 Common - hypothetical protein LMOf2365_2192 40 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 46907265 Common - transketolase, C-terminal subunit, putative LMOf2365_1054 230 COG3958 COG3958, Transketolase, C-terminal subunit Carbohydrate transport and metabolism 46907208 Common rpiA ribose 5-phosphate isomerase A LMOf2365_0996 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 46908746 Common - hypothetical protein LMOf2365_2547 1 None None None 46907655 Common opuCB glycine betaine/L-proline ABC transporter, permease protein LMOf2365_1446 200 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 46908115 Common - chitinase LMOf2365_1912 22 COG3469 COG3469, Chitinase Carbohydrate transport and metabolism 46908262 Common - methyltransferase, putative LMOf2365_2058 22 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 46908189 Common xerD integrase/recombinase XerD LMOf2365_1985 234 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 46908813 Common - polyprenyl synthetase LMOf2365_2614 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 46906636 Common - ABC transporter, permease protein, putative LMOf2365_0417 177 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 46908981 Common - chromosome partition protein, ParB family LMOf2365_2782 187 COG1475 Spo0J, Predicted transcriptional regulators Transcription 46906599 Common - transcriptional regulator, DeoR family LMOf2365_0380 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 46908597 Common - ArsC family protein LMOf2365_2397 88 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 46908224 Common - PTS system, mannose/fructose/sorbose family, IIA component LMOf2365_2020 87 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 46908274 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase LMOf2365_2070 217 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 46908135 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase LMOf2365_1931 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 46906404 Common - transition state regulatory protein AbrB LMOf2365_0183 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 46908348 Common - DNA-binding protein, putative LMOf2365_2145 1 None None None 46909011 Common - hypothetical protein LMOf2365_2813 1 None None None 46906899 Common - hypothetical protein LMOf2365_0684 9 COG5523 COG5523, Predicted integral membrane protein Function unknown 46906613 Common - transcriptional regulator, DeoR family LMOf2365_0394 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 46908649 Common galE UDP-glucose 4-epimerase LMOf2365_2450 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 46907271 Common modC molybdenum ABC transporter, ATP-binding protein LMOf2365_1060 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 46907368 Pathogen - hypothetical protein LMOf2365_1158 1 None None None 46907588 Common xseB exodeoxyribonuclease VII, small subunit LMOf2365_1379 133 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 46908738 Common - hypothetical protein LMOf2365_2539 1 None None None 46909027 Common - ABC transporter, permease protein LMOf2365_2829 147 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 46906451 Common - conserved hypothetical protein/hypoxanthine phosphoribosyltransferase, fusion LMOf2365_0230 234 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 46906338 Common - hypothetical protein LMOf2365_0116 10 COG4687 COG4687, Uncharacterized protein conserved in bacteria Function unknown 46907400 Common - ethanolamine utilization protein, putative LMOf2365_1190 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46907316 Common tagD glycerol-3-phosphate cytidylyltransferase LMOf2365_1105 114 COG0615 TagD, Cytidylyltransferase Cell envelope biogenesis, outer membrane / Lipid metabolism 46908020 Common - transcriptional regulator, MerR family LMOf2365_1815 45 COG0789 SoxR, Predicted transcriptional regulators Transcription 46906313 Common - hypothetical protein LMOf2365_0091 1 None None None 46907974 Common - hypothetical protein LMOf2365_1769 33 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 46908331 Common - PTS system, galactitol-specific, IIC component, putative LMOf2365_2128 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 46907847 Common - phosphotransferase enzyme family protein LMOf2365_1638 9 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 46906465 Common - ClpC ATPase LMOf2365_0244 230 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 46908342 Common - Ser/Thr protein phosphatase family protein LMOf2365_2139 94 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 46907051 Common - cation transport ATPase, E1-E2 family LMOf2365_0837 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 46906373 Common - hypothetical protein LMOf2365_0151 19 COG3592 COG3592, Uncharacterized conserved protein Function unknown 46908686 Common - DegV family protein LMOf2365_2487 53 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 46906841 Common - hypothetical protein LMOf2365_0625 8 COG3247 HdeD, Uncharacterized conserved protein Function unknown 46908675 Common cls-2 cardiolipin synthetase LMOf2365_2476 157 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 46907152 Common bglH-2 beta-glucosidase LMOf2365_0939 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46907793 Common - hypothetical protein LMOf2365_1584 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 46906822 Common - hypothetical protein LMOf2365_0606 43 COG3610 COG3610, Uncharacterized conserved protein Function unknown 46907038 Common - spermidine/putrescine ABC transporter, permease protein LMOf2365_0824 160 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 46906601 Common - peptidase, S51 family LMOf2365_0382 36 COG3340 PepE, Peptidase E Amino acid transport and metabolism 46907499 Common rbgA ribosomal biogenesis GTPase LMOf2365_1290 148 COG1161 COG1161, Predicted GTPases General function prediction only 46908461 Common - ABC transporter, ATP-binding protein LMOf2365_2260 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46906987 Common - ABC transporter, ATP-binding protein LMOf2365_0772 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46906858 Common - alcohol dehydrogenase, zinc-dependent LMOf2365_0642 211 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 46906545 Common - type II restriction enzyme Sau3AI, putative LMOf2365_0325 7 None None None 46908386 Common - flavodoxin LMOf2365_2185 13 COG0716 FldA, Flavodoxins Energy production and conversion 46908318 Common - CrcB protein LMOf2365_2114 31 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 46908986 Common mtlA PTS system, mannitol-specific, IIBC component LMOf2365_2787 42 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 46906434 Common hly listeriolysin O LMOf2365_0213 7 None None None 46908081 Common - manganese ABC transporter, ATP-binding protein LMOf2365_1877 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 46907154 Common - ABC transporter, ATP-binding protein LMOf2365_0941 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46908094 Common - lipase/acylhydrolase, putative LMOf2365_1890 20 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 46908238 Common - DNA-binding response regulator LMOf2365_2034 220 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 46906892 Common - glyoxalase family protein LMOf2365_0677 39 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 46907673 Common zurR transcriptional regulator ZurR LMOf2365_1464 92 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 46908587 Common - lipoprotein, putative LMOf2365_2387 1 None None None 46907438 Common - hypothetical protein LMOf2365_1228 2 None None None 46908539 Common - MutT/nudix family protein LMOf2365_2339 23 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 46907698 Common - conserved hypothetical protein TIGR00046 LMOf2365_1489 195 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 46907963 Common gltD glutamate synthase subunit beta LMOf2365_1757 210 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 46907563 Common - rhomboid family protein LMOf2365_1354 73 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 46907248 Common - glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein LMOf2365_1037 63 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 46908124 Common recU Holliday junction-specific endonuclease LMOf2365_1920 17 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 46907856 Common - hypothetical protein LMOf2365_1648 1 None None None 46908861 Common kdpA potassium-transporting ATPase subunit A LMOf2365_2662 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 46908027 Common - glutamine amidotransferase, class-I LMOf2365_1822 123 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 46906703 Common - hypothetical protein LMOf2365_0486 27 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 46908713 Common - Sua5/YciO/YrdC/YwlC family protein LMOf2365_2514 240 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 46907545 Common proS prolyl-tRNA synthetase LMOf2365_1336 240 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46908644 Common - hypothetical protein LMOf2365_2445 54 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 46906583 Common - putative translaldolase LMOf2365_0363 184 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 46906265 Common - PTS system, beta-glucoside-specific, IIC component LMOf2365_0043 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908613 Common - hypothetical protein LMOf2365_2413 89 COG2378 COG2378, Predicted transcriptional regulator Transcription 46906284 Common rplI 50S ribosomal protein L9 LMOf2365_0062 214 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 46907763 Common - hypothetical protein LMOf2365_1554 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 46908173 Common ansA L-asparaginase LMOf2365_1969 139 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 46908146 Common - hypothetical protein LMOf2365_1942 6 None None None 46908233 Common - oxidoreductase, aldo/keto reductase family LMOf2365_2029 205 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 46908532 Pathogen - hypothetical protein LMOf2365_2332 1 None None None 46907973 Common - hypothetical protein LMOf2365_1768 2 None None None 46906721 Common - HD domain protein LMOf2365_0504 61 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 46907433 Common - hypothetical protein LMOf2365_1223 5 None None None 46906837 Common - hypothetical protein LMOf2365_0621 3 COG2839 COG2839, Uncharacterized protein conserved in bacteria Function unknown 46907664 Common - aspartate kinase I LMOf2365_1455 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 46908326 Common argH argininosuccinate lyase LMOf2365_2123 238 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 46908545 Common - aspartate kinase LMOf2365_2345 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 46906645 Common - hypothetical protein LMOf2365_0427 5 COG4835 COG4835, Uncharacterized protein conserved in bacteria Function unknown 46906302 Pathogen - hypothetical protein LMOf2365_0080 2 None None None 46908850 Common - hypothetical protein LMOf2365_2651 1 None None None 46906921 Common - hypothetical protein LMOf2365_0705 9 COG4876 COG4876, Uncharacterized protein conserved in bacteria Function unknown 46906449 Common - cell division protein DivIC, putative LMOf2365_0228 6 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 46906365 Common - hypothetical protein LMOf2365_0143 1 None None None 46907264 Common - transketolase, N-terminal subunit LMOf2365_1053 221 COG3959 COG3959, Transketolase, N-terminal subunit Carbohydrate transport and metabolism 46906485 Common - hypothetical protein LMOf2365_0264 117 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 46907511 Common - conserved hypothetical protein TIGR00023 LMOf2365_1302 170 COG0344 COG0344, Predicted membrane protein Function unknown 46906231 Common gyrA DNA gyrase, A subunit LMOf2365_0007 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 46908552 Common - putative monovalent cation/H+ antiporter subunit B LMOf2365_2352 31 COG2111 MnhB, Multisubunit Na+/H+ antiporter, MnhB subunit Inorganic ion transport and metabolism 46906811 Common hisB imidazoleglycerol-phosphate dehydratase LMOf2365_0595 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 46906698 Common - hypothetical protein LMOf2365_0481 9 None None None 46906979 Common - hypothetical protein LMOf2365_0764 4 None None None 46908255 Common - transposase OrfA, IS3 family, putative LMOf2365_2051 2 None None None 46907891 Common leuS leucyl-tRNA synthetase LMOf2365_1684 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46907773 Common minC septum formation inhibitor LMOf2365_1564 39 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 46909030 Common - transcriptional regulator, LacI family LMOf2365_2832 127 COG1609 PurR, Transcriptional regulators Transcription 46907513 Common parE DNA topoisomerase IV subunit B LMOf2365_1304 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 46907987 Common - lipoprotein, putative LMOf2365_1782 9 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 46906678 Pathogen - hypothetical protein LMOf2365_0460 1 None None None 46908519 Common - amino acid ABC transporter, amino acid-binding protein LMOf2365_2319 154 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 46908924 Common - CBS domain protein LMOf2365_2725 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 46908102 Common - DedA family protein LMOf2365_1899 180 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 46907725 Common udk uridine kinase LMOf2365_1516 78 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 46908194 Common - iron compound ABC transporter, ATP-binding protein LMOf2365_1990 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 46906578 Pathogen - hypothetical protein LMOf2365_0358 1 None None None 46908058 Common rpoZ DNA-directed RNA polymerase, omega subunit LMOf2365_1854 16 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 46906795 Common - hypothetical protein LMOf2365_0579 1 None None None 46907518 Common - glycerophosphoryl diester phosphodiesterase, putative LMOf2365_1309 176 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 46906699 Common - hypothetical protein LMOf2365_0482 15 None None None 46907029 Common - lysine-specific permease LMOf2365_0815 144 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 46906573 Common - hypothetical protein LMOf2365_0353 1 None None None 46908041 Common plsX fatty acid/phospholipid synthesis protein LMOf2365_1837 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 46908425 Common spxA transcriptional regulator Spx LMOf2365_2224 65 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 46908568 Common - hypothetical protein LMOf2365_2368 1 None None None 46908561 Common - hypothetical protein LMOf2365_2361 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46906519 Common - sugar ABC transporter, ATP-binding protein LMOf2365_0298 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 46907912 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase LMOf2365_1705 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 46907971 Common - sensor histidine kinase LMOf2365_1766 215 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 46907307 Common - hypothetical protein LMOf2365_1096 10 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 46906512 Common - glycosyl hydrolase, family 1 LMOf2365_0291 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46906951 Common - flagellar motor switch protein LMOf2365_0736 53 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 46906488 Common - sugar ABC transporter, sugar-binding protein LMOf2365_0267 59 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 46907997 Common purM phosphoribosylaminoimidazole synthetase LMOf2365_1792 234 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 46907713 Common - hypothetical protein LMOf2365_1504 54 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46907260 Common - hypothetical protein LMOf2365_1049 11 COG5503 COG5503, Uncharacterized conserved small protein Function unknown 46908718 Common thrC threonine synthase LMOf2365_2519 188 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 46907980 Common - hypothetical protein LMOf2365_1775 5 COG4884 COG4884, Uncharacterized protein conserved in bacteria Function unknown 46908936 Common pabB para-aminobenzoate synthase, component I LMOf2365_2737 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 46906692 Pathogen - hypothetical protein LMOf2365_0475 1 None None None 46908975 Common kaT catalase LMOf2365_2776 124 COG0753 KatE, Catalase Inorganic ion transport and metabolism 46908757 Common - formate dehydrogenase, alpha subunit LMOf2365_2558 214 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 46908079 Common - ABC transporter, manganese-binding protein LMOf2365_1875 179 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 46908063 Common pyrE orotate phosphoribosyltransferase LMOf2365_1859 130 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 46907018 Common - BadF/BadG/BcrA/BcrD ATPase family LMOf2365_0804 65 COG3581 COG3581, Uncharacterized protein conserved in bacteria Function unknown 46907708 Common rpsT 30S ribosomal protein S20 LMOf2365_1499 121 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 46908412 Common - cell wall surface anchor family protein LMOf2365_2211 49 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 46906532 Common - metallo-beta-lactamase family protein LMOf2365_0311 73 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 46908855 Common - ImpB/MucB/SamB family protein LMOf2365_2656 162 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 46906416 Common malL-1 oligo-1,6-glucosidase LMOf2365_0195 164 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 46907557 Common pnp polynucleotide phosphorylase/polyadenylase LMOf2365_1348 239 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 46907300 Common pyc pyruvate carboxylase LMOf2365_1089 240 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 46907297 Common - hypothetical protein LMOf2365_1086 4 COG4896 COG4896, Uncharacterized protein conserved in bacteria Function unknown 46908835 Common dgt deoxyguanosinetriphosphate triphosphohydrolase-like protein LMOf2365_2636 160 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 46906881 Common - Rrf2 family protein LMOf2365_0665 186 COG1959 COG1959, Predicted transcriptional regulator Transcription 46908654 Common lgt prolipoprotein diacylglyceryl transferase LMOf2365_2455 183 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 46907866 Common - ABC transporter, ATP-binding protein LMOf2365_1658 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 46908573 Common - CBS domain protein LMOf2365_2373 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 46907122 Common rsbS anti-sigma factor B antagonist LMOf2365_0909 29 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46907346 Common - hypothetical protein LMOf2365_1136 48 COG0789 SoxR, Predicted transcriptional regulators Transcription 46908229 Common - PTS system, mannose/fructose/sorbose family, IIB component LMOf2365_2025 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 46906907 Common - transposase OrfA, IS3 family, putative LMOf2365_0692 11 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 46907414 Common cbiE cobalt-precorrin-6Y C(5)-methyltransferase LMOf2365_1204 96 COG2241 CobL, Precorrin-6B methylase 1 Coenzyme metabolism 46907686 Common glyS glycyl-tRNA synthetase, beta subunit LMOf2365_1477 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 46907524 Pathogen - hypothetical protein LMOf2365_1315 1 None None None 46907399 Common - aldehyde dehydrogenase family protein LMOf2365_1189 181 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 46906397 Common - STAS domain protein LMOf2365_0176 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46908388 Common nrdA ribonucleotide-diphosphate reductase subunit alpha LMOf2365_2187 220 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 46908375 Common - hypothetical protein LMOf2365_2174 1 COG1802 GntR, Transcriptional regulators Transcription 46908046 Common - DAK2 domain protein LMOf2365_1842 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 46907955 Common - transcriptional regulator, GntR family LMOf2365_1749 106 COG1725 COG1725, Predicted transcriptional regulators Transcription 46906542 Common - glycosyl hydrolase, family 1 LMOf2365_0321 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 46906949 Common - flagellar motor switch protein LMOf2365_0734 11 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 46908202 Common - DNA-damage-inducible protein P, putative LMOf2365_1998 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 46907444 Common - transcriptional regulator, MarR family LMOf2365_1234 114 COG1846 MarR, Transcriptional regulators Transcription 46907503 Common gid tRNA (uracil-5-)-methyltransferase Gid LMOf2365_1294 89 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 46907630 Common - hypothetical protein LMOf2365_1421 8 COG4550 COG4550, Predicted membrane protein Function unknown 46907668 Common - hypothetical protein LMOf2365_1459 4 None None None 161611351 Common cbiM cobalt transport protein CbiM LMOf2365_1213 68 COG0310 CbiM, ABC-type Co2+ transport system, permease component Inorganic ion transport and metabolism 46908159 Common aroH chorismate mutase LMOf2365_1955 39 COG4401 AroH, Chorismate mutase Amino acid transport and metabolism 46908308 Common - redox-sensing transcriptional repressor Rex LMOf2365_2104 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 46907234 Common ptsH phosphocarrier protein HPr LMOf2365_1023 144 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 46907342 Common - acetyltransferase, GNAT family LMOf2365_1132 47 None None None 46908363 Common - CAAX amino terminal protease family protein LMOf2365_2161 4 None None None 46907111 Common - oxidoreductase, aldo/keto reductase family LMOf2365_0897 170 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 46908025 Common rimM 16S rRNA processing protein RimM LMOf2365_1820 168 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 46906351 Common - EAL domain protein LMOf2365_0129 131 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 46908072 Common - pyrimidine regulatory protein PyrR LMOf2365_1868 114 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 46907440 Common pheS phenylalanyl-tRNA synthetase subunit alpha LMOf2365_1230 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 46906872 Common - cell wall surface anchor family protein LMOf2365_0656 14 None None None 46908501 Common addB ATP-dependent nuclease, subunit B LMOf2365_2301 26 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 46907459 Common - phosphoesterase family protein LMOf2365_1249 39 COG0622 COG0622, Predicted phosphoesterase General function prediction only 46906800 Common - proton-dependent oligopeptide transporter LMOf2365_0584 85 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 46908896 Common cydB cytochrome d ubiquinol oxidase, subunit II LMOf2365_2697 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 46907067 Common - phosphate-starvation-inducible protein PsiE LMOf2365_0853 19 COG3223 COG3223, Predicted membrane protein Function unknown 46908451 Common - hypothetical protein LMOf2365_2250 3 COG4980 GvpP, Gas vesicle protein General function prediction only 46906879 Common - hypothetical protein LMOf2365_0663 10 COG4573 GatZ, Predicted tagatose 6-phosphate kinase Carbohydrate transport and metabolism 46909009 Common - transcriptional regulator, AraC family LMOf2365_2811 100 COG3664 XynB, Beta-xylosidase Carbohydrate transport and metabolism 46907128 Common - sigma-B negative effector, putative LMOf2365_0915 23 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 46906738 Common - transcriptional regulator, LysR family LMOf2365_0522 190 COG0583 LysR, Transcriptional regulator Transcription 46908837 Common - cell wall surface anchor family protein LMOf2365_2638 16 None None None 46906807 Common hisI phosphoribosyl-AMP cyclohydrolase LMOf2365_0591 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 46907321 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein LMOf2365_1110 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 46907859 Common trpF N-(5'phosphoribosyl)anthranilate isomerase LMOf2365_1651 195 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 46907639 Common - DNA-binding protein LMOf2365_1430 52 COG3655 COG3655, Predicted transcriptional regulator Transcription 46907902 Common - laminin-binding surface protein, putative LMOf2365_1695 173 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 46906656 Common - hypothetical protein LMOf2365_0438 7 COG3548 COG3548, Predicted integral membrane protein Function unknown 46907121 Common rsbR modulator protein RsbR LMOf2365_0908 32 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46906248 Common - PTS system, mannose/fructose/sorbose family, IIB component LMOf2365_0025 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 46906626 Common - acetyltransferase, GNAT family LMOf2365_0407 31 COG0456 RimI, Acetyltransferases General function prediction only 46906342 Common - YneC family protein LMOf2365_0120 33 COG1359 COG1359, Uncharacterized conserved protein Function unknown 46907405 Common - hypothetical protein LMOf2365_1195 16 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 46908948 Common - ABC transporter, ATP-binding protein LMOf2365_2749 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 46907072 Common - cation transport ATPase family protein LMOf2365_0858 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 46908817 Common - hypothetical protein LMOf2365_2618 15 None None None 46907092 Common - sugar ABC transporter, permease protein LMOf2365_0878 150 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 46908014 Common rpmI 50S ribosomal protein L35 LMOf2365_1809 63 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 46906763 Common - hypothetical protein LMOf2365_0547 33 COG3759 COG3759, Predicted membrane protein Function unknown 46908464 Common - arsenate reductase, putative LMOf2365_2263 4 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 46906385 Pathogen - hypothetical protein LMOf2365_0164 1 None None None 46906719 Common - hypothetical protein LMOf2365_0502 1 None None None 46906426 Common - ABC transporter, ATP-binding protein LMOf2365_0205 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46908065 Common pyrD dihydroorotate dehydrogenase LMOf2365_1861 239 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 46907862 Common trpG anthranilate synthase, glutamine amidotransferase component LMOf2365_1654 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 46908470 Common - shikimate 5-dehydrogenase LMOf2365_2269 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 46906883 Pathogen - hypothetical protein LMOf2365_0667 1 None None None 46908604 Common estA tributyrin esterase LMOf2365_2404 84 COG0627 COG0627, Predicted esterase General function prediction only 46908414 Common - hypothetical protein LMOf2365_2213 16 None None None 46907626 Common recA recombinase A LMOf2365_1417 240 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 46908509 Common - hypothetical protein LMOf2365_2309 73 COG1683 COG1683, Uncharacterized conserved protein Function unknown 46907825 Common ezrA septation ring formation regulator EzrA LMOf2365_1616 32 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 46908977 Common - chromosome partition protein, ParB family LMOf2365_2778 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 46907146 Common - hypothetical protein LMOf2365_0933 2 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 46907648 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase LMOf2365_1439 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 46907396 Common eutC ethanolamine ammonia-lyase small subunit LMOf2365_1186 52 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 46907916 Common gsaB glutamate-1-semialdehyde aminotransferase LMOf2365_1709 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 46908380 Common - hypothetical protein LMOf2365_2179 119 COG2855 COG2855, Predicted membrane protein Function unknown 46908001 Common purS phosphoribosylformylglycinamidine synthase subunit PurS LMOf2365_1796 109 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 46906829 Common - hypothetical protein LMOf2365_0613 179 COG0628 PerM, Predicted permease General function prediction only 46908752 Common - ABC transporter, permease protein LMOf2365_2553 25 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 46907736 Common - sensor histidine kinase LMOf2365_1527 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 46907531 Common - hypothetical protein LMOf2365_1322 14 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 46909044 Common rpmH 50S ribosomal protein L34 LMOf2365_2846 192 None None None 46907940 Common map methionine aminopeptidase LMOf2365_1733 247 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 46907969 Common - amino acid ABC transporter, ATP-binding protein LMOf2365_1763 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 46906972 Common - fibronectin-binding protein LMOf2365_0757 7 None None None 46906566 Common - hypothetical protein LMOf2365_0346 1 None None None 46906740 Common - lipase/acylhydrolase family protein LMOf2365_0524 16 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 46909019 Common trx-2 thioredoxin LMOf2365_2821 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 46908952 Common - PTS system, cellobiose-specific, IIC component, putative LMOf2365_2753 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46908150 Common pfl-2 formate acetyltransferase LMOf2365_1946 52 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 46907331 Common - transcriptional regulator, AraC family LMOf2365_1120 62 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 46908792 Common rplE 50S ribosomal protein L5 LMOf2365_2593 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 46906996 Common - hypothetical protein LMOf2365_0781 23 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 46908780 Common rpsM 30S ribosomal protein S13 LMOf2365_2581 229 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 46908697 Common - mbl protein LMOf2365_2498 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 46907530 Common - hypothetical protein LMOf2365_1321 3 None None None 46907609 Common - acylphosphatase, putative LMOf2365_1400 81 COG1254 AcyP, Acylphosphatases Energy production and conversion 46907472 Common - hypothetical protein LMOf2365_1263 1 None None None 46907813 Common - hypothetical protein LMOf2365_1604 24 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 46908970 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_2771 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46907254 Common - DNA-binding response regulator LMOf2365_1043 219 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 46908246 Common - PAP2 family protein LMOf2365_2042 118 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 46906611 Common - hypothetical protein LMOf2365_0392 86 COG2378 COG2378, Predicted transcriptional regulator Transcription 46907452 Common trx-1 thioredoxin LMOf2365_1242 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 46907364 Common cobU cobinamide kinase/cobinamide phosphate guanylyltransferase LMOf2365_1154 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 46906296 Common - hypothetical protein LMOf2365_0074 2 None None None 46908966 Pathogen - bacteriocin, putative LMOf2365_2767 1 None None None 46906712 Common - lipoprotein, putative LMOf2365_0495 21 None None None 46906784 Common - tagatose 1,6-diphosphate aldolase LMOf2365_0568 26 COG3684 LacD, Tagatose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 46908910 Common - hypothetical protein LMOf2365_2711 36 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 46908039 Common fabG 3-oxoacyl-(acyl-carrier-protein) reductase LMOf2365_1835 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 46906576 Pathogen - hypothetical protein LMOf2365_0356 1 None None None 46907337 Common - hypothetical protein LMOf2365_1127 1 None None None 46908956 Common - hypothetical protein LMOf2365_2757 7 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 46908523 Common - sodium/hydrogen exchanger family protein LMOf2365_2323 98 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 46908185 Common scpA segregation and condensation protein A LMOf2365_1981 148 COG1354 COG1354, Uncharacterized conserved protein Function unknown 46906653 Common - DNA-binding protein LMOf2365_0435 71 COG1476 COG1476, Predicted transcriptional regulators Transcription 46907462 Pathogen - hypothetical protein LMOf2365_1253 2 None None None 46907850 Common - dipeptidase PepV LMOf2365_1642 63 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 46906233 Common speG spermidine N1-acetyltransferase LMOf2365_0009 103 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 46906328 Common - ATP synthase F1, delta subunit, putative LMOf2365_0106 1 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 46907357 Common - hypothetical protein LMOf2365_1147 43 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 46907832 Common - hypothetical protein LMOf2365_1623 9 COG4768 COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain General function prediction only 46908037 Pathogen - hypothetical protein LMOf2365_1833 1 None None None 46907806 Common - DHH subfamily 1 protein LMOf2365_1597 79 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 46907095 Common - hypothetical protein LMOf2365_0881 32 COG2152 COG2152, Predicted glycosylase Carbohydrate transport and metabolism 46908851 Common - transcriptional regulator, AraC family LMOf2365_2652 35 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 46906474 Common - RNA methyltransferase, TrmH family, group 3 LMOf2365_0253 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 46908683 Common yfiA ribosomal subunit interface protein LMOf2365_2484 173 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 46907577 Common - rhodanese-like domain protein LMOf2365_1368 142 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 46907181 Common - hypothetical protein LMOf2365_0969 172 COG0628 PerM, Predicted permease General function prediction only 46907085 Common sugE-2 SugE protein LMOf2365_0871 144 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 46907566 Common - lipoprotein, putative LMOf2365_1357 2 None None None 46907027 Common - YceI like family protein LMOf2365_0813 121 COG2353 COG2353, Uncharacterized conserved protein Function unknown 46907483 Common - hypothetical protein LMOf2365_1274 1 None None None 46908787 Common rpsE 30S ribosomal protein S5 LMOf2365_2588 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 46908512 Common rsuA ribosomal small subunit pseudouridine synthase A LMOf2365_2312 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 46907195 Common - heat shock protein HtpX LMOf2365_0983 188 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 46908168 Common - protein-tyrosine phosphatase, putative LMOf2365_1964 49 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 46907288 Common - hypothetical protein LMOf2365_1077 1 None None None 46906414 Common - glycosyl hydrolase, family 31 LMOf2365_0193 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 46907935 Common - hypothetical protein LMOf2365_1728 57 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 46908450 Common - HIT family protein LMOf2365_2249 235 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 46906585 Common rpiB-1 ribose 5-phosphate isomerase B LMOf2365_0365 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 46908799 Common rplV 50S ribosomal protein L22 LMOf2365_2600 231 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 46907800 Common fxsA FxsA LMOf2365_1591 44 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 46906991 Common - hydrolase, alpha/beta fold family LMOf2365_0776 27 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 46907119 Common alr alanine racemase LMOf2365_0905 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 46906509 Common - transporter, putative LMOf2365_0288 109 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 46908443 Common - acetyltransferase, GNAT family LMOf2365_2242 8 COG3393 COG3393, Predicted acetyltransferase General function prediction only 46908448 Common - ABC transporter, permease protein LMOf2365_2247 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 46908354 Common glmM phosphoglucosamine mutase LMOf2365_2151 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 46906590 Common - hypothetical protein LMOf2365_0370 3 None None None 46908476 Common - Ada regulatory protein, putative LMOf2365_2276 144 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 46907893 Common - hypothetical protein LMOf2365_1686 29 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46906341 Common - transcriptional regulator, ArsR family LMOf2365_0119 22 COG0640 ArsR, Predicted transcriptional regulators Transcription 46906748 Common - PTS system, IIA component LMOf2365_0532 40 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46908140 Common dapB dihydrodipicolinate reductase LMOf2365_1936 215 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 46906253 Common - PTS system, beta-glucoside-specific, IIABC component LMOf2365_0030 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 46909016 Common - transcriptional regulator, MarR family LMOf2365_2818 12 COG1846 MarR, Transcriptional regulators Transcription 46906502 Common inlC2 internalin C2 LMOf2365_0281 44 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906861 Common - glycerophosphoryl diester phosphodiesterase family protein LMOf2365_0645 139 COG4781 COG4781, Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase Energy production and conversion 46908174 Common - lysM domain protein LMOf2365_1970 2 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 46906442 Common ldh L-lactate dehydrogenase LMOf2365_0221 176 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 46907434 Common - N-acetylmuramoyl-L-alanine amidase, family 4 LMOf2365_1224 69 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 46906571 Common - hypothetical protein LMOf2365_0351 3 COG4635 HemG, Flavodoxin Energy production and conversion / Coenzyme metabolism 46907976 Common - ABC transporter, permease protein LMOf2365_1771 17 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 46907839 Common - hypothetical protein LMOf2365_1630 7 COG4848 COG4848, Uncharacterized protein conserved in bacteria Function unknown 46908847 Common - PTS system IIA 2 domain protein LMOf2365_2648 30 COG3711 BglG, Transcriptional antiterminator Transcription 46906402 Common - hypothetical protein LMOf2365_0181 65 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 46907529 Common lexA LexA repressor LMOf2365_1320 170 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 46908145 Common - GGDEF domain protein LMOf2365_1941 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 46907876 Common - 1-acylglycerol-3-phosphate O-acyltransferase domain protein LMOf2365_1668 107 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 46908056 Common priA primosome assembly protein PriA LMOf2365_1852 216 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 46907830 Common - bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase LMOf2365_1621 188 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 46907469 Common dbpA ATP-dependent RNA helicase DbpA LMOf2365_1260 243 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 46906793 Common - hypothetical protein LMOf2365_0577 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46908875 Common - hypothetical protein LMOf2365_2676 37 COG3412 COG3412, Uncharacterized protein conserved in bacteria Function unknown 46907053 Common - acetyltransferase, GNAT family LMOf2365_0839 23 COG0456 RimI, Acetyltransferases General function prediction only 46907509 Common - hypothetical protein LMOf2365_1300 4 None None None 46906554 Common thiM hydroxyethylthiazole kinase LMOf2365_0334 77 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 46908767 Pathogen - lipoprotein, putative LMOf2365_2568 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 46908333 Common - PTS system galactitol-specific enzyme IIA component LMOf2365_2130 20 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 46906463 Common - UVR domain protein LMOf2365_0242 19 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 46908166 Common folE GTP cyclohydrolase I LMOf2365_1962 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 46906989 Common - ABC transporter, ATP-binding/permease protein, putative LMOf2365_0774 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46908390 Common - metallo-beta-lactamase family protein LMOf2365_2189 43 COG2015 COG2015, Alkyl sulfatase and related hydrolases Secondary metabolites biosynthesis, transport, and catabolism 46906375 Common - oligopeptide ABC transporter, oligopeptide-binding protein LMOf2365_0153 208 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 46907410 Common cobB cobyrinic acid a,c-diamide synthase LMOf2365_1200 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 46908401 Common - lactoylglutathione lyase, putative LMOf2365_2200 128 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 46908968 Common - hypothetical protein LMOf2365_2769 1 None None None 46908934 Common - general stress protein 26 LMOf2365_2735 10 COG3871 COG3871, Uncharacterized stress protein (general stress protein 26) General function prediction only 46907791 Common dnaI primosomal protein DnaI LMOf2365_1582 29 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 46907037 Common - spermidine/putrescine ABC transporter, ATP-binding protein LMOf2365_0823 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 46907789 Common thrS threonyl-tRNA synthetase LMOf2365_1580 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46907544 Common - membrane-associated zinc metalloprotease, putative LMOf2365_1335 214 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 46906332 Common - ATP synthase F1, epsilon subunit, putative LMOf2365_0110 4 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 46908673 Common phoP DNA-binding response regulator PhoP LMOf2365_2474 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46906835 Common - DAK2 domain protein LMOf2365_0619 53 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 46907702 Common grpE co-chaperone GrpE LMOf2365_1493 230 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 46906931 Common flhA flagellar biosynthesis protein A LMOf2365_0716 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 46907167 Common - dolichyl-phosphate-mannose-protein mannosyltransferase family protein LMOf2365_0954 26 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 46906856 Common acpD azoreductase LMOf2365_0640 96 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 46907696 Common - GatB/Yqey domain protein LMOf2365_1487 151 COG1610 COG1610, Uncharacterized conserved protein Function unknown 46908748 Common - Cof-like hydrolase, HAD-superfamily, subfamily IIB LMOf2365_2549 99 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46908961 Common - PTS system, beta-glucoside-specific, IIABC component LMOf2365_2762 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 46906956 Common flgK flagellar hook-associated protein FlgK LMOf2365_0741 104 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 46907107 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_0893 31 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46908092 Common msrA methionine sulfoxide reductase A LMOf2365_1888 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 46906963 Common fliE flagellar hook-basal body protein FliE LMOf2365_0748 7 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 46908988 Common - N-acetylmannosamine-6-phosphate 2-epimerase LMOf2365_2789 43 COG3010 NanE, Putative N-acetylmannosamine-6-phosphate epimerase Carbohydrate transport and metabolism 46908211 Common ilvB acetolactate synthase, large subunit, biosynthetic type LMOf2365_2007 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 46906522 Common - hypothetical protein LMOf2365_0301 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46906916 Common - hypothetical protein LMOf2365_0700 67 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 46907273 Common modA molybdenum ABC transporter, molybdenum-binding protein LMOf2365_1062 156 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 46908269 Common ftsA cell division protein FtsA LMOf2365_2065 179 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 46907008 Common - hypothetical protein LMOf2365_0793 1 None None None 46908260 Common - hypothetical protein LMOf2365_2056 20 None None None 46908492 Common - PTS system, beta-glucoside-specific, IIA component LMOf2365_2292 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 46908868 Common - transcriptional regulator, TetR family LMOf2365_2669 15 COG1309 AcrR, Transcriptional regulator Transcription 46907425 Common cbiQ cobalt transport protein CbiQ LMOf2365_1215 44 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 46906380 Common - hypothetical protein LMOf2365_0159 2 None None None 46908820 Common ulaA ascorbate-specific PTS system enzyme IIC LMOf2365_2621 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 46908514 Common - glutaredoxin family protein LMOf2365_2314 3 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 46908635 Common - renal dipeptidase family protein LMOf2365_2435 103 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 46907383 Common pduP CoA-dependent propionaldehyde dehydrogenase LMOf2365_1173 186 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 46906536 Common - transcriptional regulator, LysR family LMOf2365_0315 83 COG0583 LysR, Transcriptional regulator Transcription 46906639 Common - alpha-mannosidase LMOf2365_0421 53 COG0383 AMS1, Alpha-mannosidase Carbohydrate transport and metabolism 46906561 Common - endonuclease/exonuclease/phosphatase family protein LMOf2365_0341 29 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 46907422 Common cobI cobalt-precorrin-2 C(20)-methyltransferase LMOf2365_1212 115 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 46907757 Common yajC preprotein translocase, YajC subunit LMOf2365_1548 180 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 46908415 Common - hypothetical protein LMOf2365_2214 5 COG4509 COG4509, Uncharacterized protein conserved in bacteria Function unknown 46906802 Common - phosphoglycerate mutase family protein LMOf2365_0586 104 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 46907202 Common fabI enoyl-(acyl carrier protein) reductase LMOf2365_0990 228 COG0623 FabI, Enoyl- acyl-carrier-protein 46906638 Common - hypothetical protein LMOf2365_0419 7 COG3832 COG3832, Uncharacterized conserved protein Function unknown 46907033 Common - Na+/H+ antiporter LMOf2365_0819 101 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 46906235 Common - mevalonate kinase LMOf2365_0011 70 COG1577 ERG12, Mevalonate kinase Lipid metabolism 46907159 Common - ABC transporter, permease protein LMOf2365_0946 119 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 46908226 Common - SIS domain protein LMOf2365_2022 225 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 46908554 Common - putative monovalent cation/H+ antiporter subunit D LMOf2365_2354 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 46907238 Common - aromatic amino acid aminotransferase, putative LMOf2365_1027 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 46907314 Common - teichoic acid biosynthesis domain protein LMOf2365_1103 33 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 46909024 Common ycjR YcjR protein LMOf2365_2826 65 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 46906453 Common - pantothenate kinase LMOf2365_0232 128 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 46906680 Pathogen - hypothetical protein LMOf2365_0462 1 None None None 46909013 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein LMOf2365_2815 228 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 46908048 Common rpmB 50S ribosomal protein L28 LMOf2365_1844 55 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 46908922 Common garK-1 glycerate kinase 2 LMOf2365_2723 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 46908993 Common - hypothetical protein LMOf2365_2794 5 None None None 46908285 Common drrC daunorubicin resistance protein LMOf2365_2081 247 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 46906981 Common - hypothetical protein LMOf2365_0766 1 None None None 46906809 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase LMOf2365_0593 215 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 46908313 Common - hypothetical protein LMOf2365_2109 199 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 46908018 Pathogen - hypothetical protein LMOf2365_1813 1 None None None 46908276 Common - cell division protein, FtsL family LMOf2365_2072 6 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 46908193 Common - iron compound ABC transporter, iron compound-binding protein LMOf2365_1989 59 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 46906926 Common - hypothetical protein LMOf2365_0711 2 None None None 46907281 Common moeB molybdopterin biosynthesis protein MoeB LMOf2365_1070 221 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 46907488 Common - Ans operon transcriptional repressor, putative LMOf2365_1279 12 COG1396 HipB, Predicted transcriptional regulators Transcription 46908180 Common - cytosolic long-chain acyl-CoA thioester hydrolase family protein LMOf2365_1976 138 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 46906274 Common arcA arginine deiminase LMOf2365_0052 62 COG2235 ArcA, Arginine deiminase Amino acid transport and metabolism 46906668 Common - wall-associated protein, putative LMOf2365_0450 95 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 46906251 Common - hypothetical protein LMOf2365_0028 18 COG4821 COG4821, Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain General function prediction only 46907593 Common argR arginine repressor LMOf2365_1384 52 COG1438 ArgR, Arginine repressor Transcription 46908771 Common - cobalt ABC transporter, permease protein LMOf2365_2572 93 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 46908410 Common - hypothetical protein LMOf2365_2209 6 None None None 46906510 Common - leucine rich repeat domain protein LMOf2365_0289 33 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46906530 Common - hypothetical protein LMOf2365_0309 9 COG4863 COG4863, Uncharacterized protein conserved in bacteria Function unknown 46908778 Common rpoA DNA-directed RNA polymerase subunit alpha LMOf2365_2579 217 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 46908118 Common - thermostable carboxypeptidase LMOf2365_1915 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 46906761 Common - capA domain protein LMOf2365_0545 70 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 46908811 Common - hypothetical protein LMOf2365_2612 10 COG5341 COG5341, Uncharacterized protein conserved in bacteria Function unknown 46907589 Common - geranyltranstransferase LMOf2365_1380 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 46907526 Common glnA glutamine synthetase, type I LMOf2365_1317 231 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 46908874 Common - dihydroxyacetone kinase, Dak2 subunit, putative LMOf2365_2675 76 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 46906681 Common - hypothetical protein LMOf2365_0463 1 None None None 46908759 Common lmrB-2 lincomycin resistance protein LmrB LMOf2365_2560 197 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46908741 Common - bacterial extracellular solute-binding protein, family 5 LMOf2365_2542 170 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 46906363 Common - minor structural protein, putative LMOf2365_0141 4 None None None 46908651 Common - TPR domain protein LMOf2365_2452 14 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 46906813 Common hisG ATP phosphoribosyltransferase catalytic subunit LMOf2365_0597 210 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 46907267 Common - PTS system, beta-glucoside-specific, IIABC component LMOf2365_1056 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 46908074 Common - STAS domain protein LMOf2365_1870 31 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 46907681 Common - hypothetical protein LMOf2365_1472 30 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 46906352 Common - hypothetical protein LMOf2365_0130 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 46907618 Common - ABC transporter, permease protein, putative LMOf2365_1409 107 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 46906316 Common - pentapeptide repeats domain protein LMOf2365_0094 62 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 46907947 Common - hypothetical protein LMOf2365_1740 33 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 46908656 Common - hypothetical protein LMOf2365_2457 8 COG1950 COG1950, Predicted membrane protein Function unknown 46908575 Common - HAD-superfamily hydrolase, subfamily IIA LMOf2365_2375 117 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 46907815 Common - hypothetical protein LMOf2365_1606 15 COG1714 COG1714, Predicted membrane protein/domain Function unknown 46907925 Common - hypothetical protein LMOf2365_1718 114 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 46907070 Common tetA tetracycline resistance protein LMOf2365_0856 138 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 46907520 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase LMOf2365_1311 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 46907348 Common - ABC transporter, ATP-binding/permease protein LMOf2365_1138 247 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 46907675 Common zurA-2 zinc ABC transporter, ATP-binding protein LMOf2365_1466 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 46906909 Common - hypothetical protein LMOf2365_0693.1 1 None None None 46908711 Common glyA serine hydroxymethyltransferase LMOf2365_2512 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 46907782 Common valS valyl-tRNA synthetase LMOf2365_1573 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 46906540 Common - PTS system, IIC component LMOf2365_0319 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 46907688 Common recO DNA repair protein RecO LMOf2365_1479 102 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 46907555 Common ribF riboflavin biosynthesis protein RibF LMOf2365_1346 211 COG0196 RibF, FAD synthase Coenzyme metabolism 46907197 Common - hypothetical protein LMOf2365_0985 9 COG4116 COG4116, Uncharacterized protein conserved in bacteria Function unknown 46906847 Common - acetyltransferase, GNAT family LMOf2365_0631 29 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 46908609 Common - hypothetical protein LMOf2365_2409 41 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 46907370 Common pduB propanediol utilization protein PduB LMOf2365_1160 18 COG4816 EutL, Ethanolamine utilization protein Amino acid transport and metabolism 46907501 Common - Smf family protein LMOf2365_1292 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 46908857 Common kdpE DNA-binding response regulator KdpE LMOf2365_2658 212 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 46908534 Common gadB glutamate decarboxylase beta LMOf2365_2334 65 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 46907615 Common - pyrroline-5-carboxylate reductase LMOf2365_1406 126 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 46907419 Common cobK precorrin-6X reductase LMOf2365_1209 81 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 46907134 Common - hypothetical protein LMOf2365_0921 17 COG5646 COG5646, Uncharacterized conserved protein Function unknown 46908618 Common - leucine rich repeat domain protein LMOf2365_2418 2 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 46907236 Common - hypothetical protein LMOf2365_1025 39 COG1434 COG1434, Uncharacterized conserved protein Function unknown 46908113 Common - 5'-3' exonuclease family protein LMOf2365_1910 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 46907653 Common opuCD glycine betaine/L-proline ABC transporter, permease protein LMOf2365_1444 131 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 46906705 Common - hypothetical protein LMOf2365_0488 9 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 46907262 Common - transcriptional regulator, LacI family LMOf2365_1051 126 COG1609 PurR, Transcriptional regulators Transcription 46906304 Common - hypothetical protein LMOf2365_0082 4 COG5444 COG5444, Uncharacterized conserved protein Function unknown 46906301 Common - hypothetical protein LMOf2365_0079 4 None None None 46906494 Pathogen - hypothetical protein LMOf2365_0273 1 None None None 46908543 Common - ABC transporter, ATP-binding protein LMOf2365_2343 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 46906753 Common - PTS system, galactitol-specific, IIC component, putative LMOf2365_0537 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 46907771 Common - ribonuclease, Rne/Rng family LMOf2365_1562 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 46907516 Common - hypothetical protein LMOf2365_1307 16 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 46908628 Common eno enolase LMOf2365_2428 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 46907739 Common - hypothetical protein LMOf2365_1530 13 COG2267 PldB, Lysophospholipase Lipid metabolism 46906483 Common rplJ 50S ribosomal protein L10 LMOf2365_0262 215 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 46907995 Common purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase LMOf2365_1790 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 46906394 Common - Cof-like hydrolase LMOf2365_0173 144 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 46908917 Common - hypothetical protein LMOf2365_2718 1 None None None 46908088 Common deoD purine nucleoside phosphorylase LMOf2365_1884 98 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 46907843 Common - hypothetical protein LMOf2365_1634 6 COG5584 COG5584, Predicted small secreted protein Function unknown 46908725 Common - glycosyl transferase CpoA LMOf2365_2526 145 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 46906696 Common - hypothetical protein LMOf2365_0479 1 COG4499 COG4499, Predicted membrane protein Function unknown 46906676 Pathogen - hypothetical protein LMOf2365_0458 1 None None None 46907845 Common - metallo-beta-lactamase family protein LMOf2365_1636 69 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 46907582 Common accB acetyl-CoA carboxylase, biotin carboxyl carrier protein LMOf2365_1373 173 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 46906436 Pathogen actA actin-assembly inducing protein LMOf2365_0215 1 None None None 46907724 Common - transcription elongation factor GreA LMOf2365_1515 204 COG0782 GreA, Transcription elongation factor Transcription 46907305 Common - hypothetical protein LMOf2365_1094 3 None None None 46908122 Common - hypothetical protein LMOf2365_1918 11 COG4474 COG4474, Uncharacterized protein conserved in bacteria Function unknown 46906947 Common flgD flagellar basal body rod modification protein LMOf2365_0732 103 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 46908998 Common - DNA-binding protein LMOf2365_2799 6 COG2944 COG2944, Predicted transcriptional regulator Transcription 46906263 Common - ROK family protein LMOf2365_0041 171 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 46906768 Common - hypothetical protein LMOf2365_0552 7 None None None 46907989 Common pcrA ATP-dependent DNA helicase PcrA LMOf2365_1784 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 46907431 Common - hypothetical protein LMOf2365_1221 25 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 46908760 Common - transcriptional regulator, TetR family LMOf2365_2561 84 COG1309 AcrR, Transcriptional regulator Transcription