Chlamydophila pneumoniae CWL029, complete genome NC_000922 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 15618130 Common - hypothetical protein CPn0206 7 None None None 15618675 Pathogen - hypothetical protein CPn0766 2 None None None 15618443 Common ribC riboflavin synthase subunit alpha CPn0532 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 15618597 Pathogen - hypothetical protein CPn0687 2 None None None 15618954 Common phhA phenylalanine 4-monooxygenase CPn1046 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 15618096 Common guaB_1 Inosine 5'-monophosphase dehydrogenase CPn0172 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 15618236 Common nusA transcription elongation factor NusA CPn0316 216 COG0195 NusA, Transcription elongation factor Transcription 15618476 Pathogen - hypothetical protein CPn0565 1 None None None 15617933 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B CPn0004 210 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 15617940 Pathogen - hypothetical protein CPn0010.1 1 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 15618334 Common pbp3 transglycolase/transpeptidase CPn0419 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 15618789 Common ftsK Cell Division Protein FtsK CPn0880 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 15618265 Pathogen - hypothetical protein CPn0350 3 None None None 15618812 Common ftsW Cell Division Protein FtsW CPn0903 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 15618527 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA CPn0617 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 15618961 Pathogen - hypothetical protein CPn1053 1 None None None 15618407 Common - hypothetical protein CPn0496 17 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 15618088 Pathogen - hypothetical protein CPn0164 1 None None None 15618520 Common rho transcription termination factor Rho CPn0610 206 COG1158 Rho, Transcription termination factor Transcription 15618653 Common nqrA Na(+)-translocating NADH-quinone reductase subunit A CPn0743 39 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 15618400 Common - hypothetical protein CPn0489 16 COG4286 COG4286, Uncharacterized conserved protein related to MYG1 family Function unknown 15618833 Common priA primosome assembly protein PriA CPn0924 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 15618541 Common rpsE 30S ribosomal protein S5 CPn0631 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 15617996 Pathogen - hypothetical protein CPn0072 2 None None None 15618095 Common guaA GMP Synthase CPn0171 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 15618423 Common - hypothetical protein CPn0512 8 None None None 15618633 Common yhbG ABC Transporter ATPase CPn0723 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 15618259 Common yaeL Metalloprotease CPn0344 209 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 15618534 Common gapA glyceraldehyde-3-phosphate dehydrogenase CPn0624 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 15618062 Common hemL glutamate-1-semialdehyde aminotransferase CPn0138 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 15618893 Common nrdB ribonucleotide-diphosphate reductase subunit beta CPn0985 162 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 15617957 Common pdhA/pdhB (pyruvate) Oxoisovalerate Dehydrogenase Alpha & Beta Fusion CPn0033 194 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 15618492 Pathogen - hypothetical protein CPn0582 2 None None None 15618614 Pathogen fliN type III secretion system protein CPn0704 4 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 15618823 Pathogen - hypothetical protein CPn0914 2 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 15618075 Common mhpA Monooxygenase CPn0151 4 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 15618721 Common mutL DNA mismatch repair protein CPn0812 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 15618794 Common ygcA rRNA Methyltransferse CPn0885 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 15617945 Common - putative outer membrane protein CPn0021 12 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 15618606 Common rpsB 30S ribosomal protein S2 CPn0696 236 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 15618044 Common gmk guanylate kinase CPn0120 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 15618411 Common proS prolyl-tRNA synthetase CPn0500 236 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618806 Common - predicted phosphohydrolase CPn0897 27 COG1409 Icc, Predicted phosphohydrolases General function prediction only 15618113 Pathogen - hypothetical protein CPn0189 3 None None None 15617994 Pathogen - hypothetical protein CPn0070 1 None None None 15618859 Common pth peptidyl-tRNA hydrolase CPn0950 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 15618884 Pathogen - hypothetical protein CPn0976 1 None None None 15618148 Pathogen - hypothetical protein CPn0224 1 None None None 15618081 Pathogen - hypothetical protein CPn0157 1 None None None 15618030 Common phoH ATPase CPn0106 197 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 15618298 Common - hypothetical protein CPn0383 3 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 15618690 Common pal Peptidoglycan-Associated Lipoprotein CPn0781 146 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 15618146 Pathogen - weak similarity to Bacteriophage CHP1 (Orf4) CPn0222 1 None None None 15618623 Pathogen - hypothetical protein CPn0713 2 None None None 15618759 Common mreB Rod Shape Protein-Sugar Kinase CPn0850 233 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 15618956 Common asd aspartate-semialdehyde dehydrogenase CPn1048 185 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 15618488 Common yaeI phosphohydrolase CPn0578 63 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 15618479 Common cmk cytidylate kinase CPn0568 207 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 15618070 Pathogen - hypothetical protein CPn0146 1 None None None 15618819 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase CPn0910 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 15618018 Common valS valyl-tRNA synthetase CPn0094 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618361 Common pmp_8 Polymorphic Outer Membrane Protein G Family CPn0446 15 None None None 15618036 Common rpmE2 50S ribosomal protein L31 type B CPn0112 110 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 15618172 Common ycfV ABC Transporter ATPase CPn0248 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 15618512 Common - hypothetical protein CPn0602 4 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 15618256 Common yojL hypothetical protein CPn0336 129 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 15618179 Pathogen - hypothetical protein CPn0257 2 None None None 15618933 Common pgi glucose-6-phosphate isomerase CPn1025 209 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 15617978 Common rnc ribonuclease III CPn0054 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 15618918 Common - hypothetical protein CPn1010 141 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 15618291 Pathogen - hypothetical protein CPn0376 1 None None None 15618135 Pathogen - hypothetical protein CPn0211 1 None None None 15618648 Common recB Exodeoxyribonuclease V, Beta CPn0738 221 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 15618203 Pathogen - hypothetical protein CPn0283 1 None None None 15618924 Common - hypothetical protein CPn1016 7 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 15618008 Pathogen - predicted ferredoxin CPn0084 3 None None None 15618966 Pathogen - hypothetical protein CPn1058 3 None None None 15618636 Pathogen - hypothetical protein CPn0726 2 None None None 15618729 Pathogen - hypothetical protein CPn0820 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 15618224 Common pdhA Pyruvate Dehydrogenase Alpha CPn0304 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 15618329 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha CPn0414 198 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 15618215 Common acpP acyl carrier protein CPn0295 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15618503 Pathogen - hypothetical protein CPn0593 2 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 15618599 Common yfhO_1 NifS-related Aminotransferase CPn0689 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 15618878 Common tyrP_2 Tyrosine Transport CPn0970 35 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 15618184 Common ubiD aromatic acid decarboxylase CPn0264 153 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 15618902 Pathogen - hypothetical protein CPn0994 2 None None None 15618011 Pathogen - hypothetical protein CPn0087 3 None None None 15618556 Common rplD 50S ribosomal protein L4 CPn0646 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 15618284 Pathogen - hypothetical protein CPn0369 2 None None None 15618431 Common clpP_1 ATP-dependent Clp protease proteolytic subunit CPn0520 212 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15618123 Common oppB_1 Oligopeptide Permease CPn0199 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618576 Common dnaE DNA polymerase III subunit alpha CPn0666 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 15618669 Common - hypothetical protein CPn0760 44 COG1478 COG1478, Uncharacterized conserved protein Function unknown 15617963 Common ybaB hypothetical protein CPn0039 110 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 15618468 Common omcB 60 kDa Cysteine-Rich OMP CPn0557 14 None None None 15618566 Pathogen - hypothetical protein CPn0656 1 None None None 15618316 Common - hypothetical protein CPn0401 78 COG1694 MazG, Predicted pyrophosphatase General function prediction only 15618100 Pathogen - hypothetical protein CPn0176 2 None None None 15618942 Common - Predicted OMP CPn1034 4 None None None 15618978 Pathogen - hypothetical protein CPn1070 1 None None None 15617966 Common - hypothetical protein CPn0042 3 None None None 15618580 Common rsbW sigma regulatory factor-histidine kinase CPn0670 17 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 15617953 Pathogen - hypothetical protein CPn0029 1 None None None 15618862 Common rplI 50S ribosomal protein L9 CPn0953 211 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 15617985 Common ptsN_2 PTS IIA Protein + HTH DNA-Binding Domain CPn0061 103 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 15618589 Common pgk phosphoglycerate kinase CPn0679 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 15618162 Common zwf glucose-6-phosphate 1-dehydrogenase CPn0238 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 15618278 Common flhA type III secretion system protein CPn0363 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 15618405 Pathogen - hypothetical protein CPn0494 1 None None None 15618658 Common glmU UDP-GlcNAc Pyrophosphorylase CPn0749 172 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 15618053 Pathogen - hypothetical protein CPn0129 2 None None None 15618445 Common dksA DnaK Suppressor CPn0534 138 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 15618647 Common recC Exodeoxyribonuclease V, Gamma CPn0737 17 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 15618456 Common rpmA 50S ribosomal protein L27 CPn0545 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 15618388 Common yqeV hypothetical protein CPn0477 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 15618849 Common uvrC excinuclease ABC subunit C CPn0940 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 15618842 Common - predicted disulfide bond isomerase CPn0933 5 COG2143 COG2143, Thioredoxin-related protein Posttranslational modification, protein turnover, chaperones 15618169 Common ydhO Polysaccharide Hydrolase-Invasin Repeat Family CPn0245 39 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 15618734 Common yscR type III secretion system protein CPn0825 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 15618060 Common pepF Oligopeptidase CPn0136 86 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 15618748 Common psdD phosphatidylserine decarboxylase CPn0839 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 15618766 Pathogen - hypothetical protein CPn0857 2 None None None 15618915 Pathogen - hypothetical protein CPn1007 3 None None None 15618889 Common - Zinc Metalloprotease (insulinase family) CPn0981 60 COG1026 COG1026, Predicted Zn-dependent peptidases, insulinase-like General function prediction only 15618301 Common ssb single-strand DNA-binding protein CPn0386 39 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 15618342 Common nqr2 Na(+)-translocating NADH-quinone reductase subunit B CPn0427 75 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 15618001 Common rplK 50S ribosomal protein L11 CPn0077 241 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 15617984 Common ptsN_1 PTS IIA Protein CPn0060 107 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 15618260 Common yaeM 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPn0345 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 15618701 Pathogen - hypothetical protein CPn0792 2 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 15618340 Common - hypothetical protein CPn0425 44 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 15618371 Pathogen - hypothetical protein CPn0458 1 None None None 15618699 Common sdhB succinate dehydrogenase iron-sulfur subunit CPn0790 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 15618750 Common secA preprotein translocase subunit SecA CPn0841 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 15618221 Common - (OmpH-Like Outer Membrane Protein) CPn0301 5 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 15618869 Common plsX fatty acid/phospholipid synthesis protein CPn0962 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 15618838 Pathogen - CHLPS 43 kDa protein homolog_4 CPn0929 2 None None None 15618421 Common tlyC_2 CBS Domains (Hemolysin homolog) CPn0510 215 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15618801 Common alaS alanyl-tRNA synthetase CPn0892 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618546 Common rplX 50S ribosomal protein L24 CPn0636 189 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 15618073 Common ligA NAD-dependent DNA ligase LigA CPn0149 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 15618821 Common - hypothetical protein CPn0912 10 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618490 Common truA tRNA pseudouridine synthase A CPn0580 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 15618831 Common aas long chain fatty acid--[acyl-carrier-protein] ligase CPn0922 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15618191 Common - Lysophospholipase esterase CPn0271 12 COG0400 COG0400, Predicted esterase General function prediction only 15618757 Common tig trigger factor CPn0848 195 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 15618635 Pathogen - hypothetical protein CPn0725 3 None None None 15618293 Common kgd alpha-ketoglutarate decarboxylase CPn0378 151 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 15618102 Pathogen - hypothetical protein CPn0178 1 None None None 15618129 Pathogen - hypothetical protein CPn0205 1 None None None 15618090 Pathogen - hypothetical protein CPn0166 1 None None None 15618911 Pathogen - hypothetical protein CPn1003 2 None None None 15618376 Pathogen - hypothetical protein CPn0463 1 None None None 15618394 Pathogen - hypothetical protein CPn0483 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 15618775 Common birA biotin--protein ligase CPn0866 9 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 15618474 Common recJ ssDNA Exonuclease CPn0563 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 15618526 Common dnaB replicative DNA helicase CPn0616 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 15618499 Common recO DNA repair protein RecO CPn0589 5 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 15618332 Common amiA N-Acetylmuramoyl Alanine Amidase CPn0417 183 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 15618689 Common amiB N-Acetylmuramoyl-L-Ala Amidase CPn0780 5 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 15618155 Common tauB ABC Transport ATPase (Nitrate/Fe) CPn0231 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 15618069 Common - hypothetical protein CPn0145 5 COG2912 COG2912, Uncharacterized conserved protein Function unknown 15618226 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 CPn0306 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15617931 Pathogen gatC aspartyl/glutamyl-tRNA amidotransferase subunit C CPn0002 2 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 15618676 Common - hypothetical protein CPn0767 24 COG0762 COG0762, Predicted integral membrane protein Function unknown 15618810 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase CPn0901 208 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 15618233 Common acpS 4'-phosphopantetheinyl transferase CPn0313 107 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 15618462 Common rs7 30S ribosomal protein S7 CPn0551 234 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 15618871 Pathogen - hypothetical protein CPn0964 1 None None None 15618628 Pathogen - hypothetical protein CPn0718 2 None None None 15618320 Pathogen - hypothetical protein CPn0405 1 None None None 15618016 Common atpK V-type ATP synthase subunit K CPn0092 21 None None None 15618266 Common adt_1 ADP/ATP Translocase CPn0351 18 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 15618454 Common - (Metal Transport Protein) CPn0543 190 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15618621 Pathogen - hypothetical protein CPn0711 3 None None None 15618817 Pathogen - hypothetical protein CPn0908 3 None None None 15618935 Pathogen - hypothetical protein CPn1027 1 None None None 15618486 Common yhhY Amino Group Acetyl Transferase CPn0575 42 COG0456 RimI, Acetyltransferases General function prediction only 15618595 Pathogen - hypothetical protein CPn0685 1 None None None 15618417 Common - hypothetical protein CPn0506 83 COG2928 COG2928, Uncharacterized conserved protein Function unknown 15618895 Common ytgB_2 YtgB-like predicted rRNA methylase CPn0987 28 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 15618219 Common recR recombination protein RecR CPn0299 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 15618120 Common oppA_2 Oligopeptide Binding Protein CPn0196 172 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15618612 Common yscC probable Yop proteins translocation protein C/general secretion pathway protein CPn0702 134 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 15618363 Common yxjG_2 hypothetical protein CPn0448 41 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 15618740 Pathogen - hypothetical protein CPn0831 1 None None None 15618916 Common - hypothetical protein CPn1008 5 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618952 Common bioB Biotin Synthase CPn1044 182 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 15618249 Common - Phopholipase D Superfamily CPn0329 50 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15618651 Common greA transcript cleavage factor/unknown domain fusion protein CPn0741 198 COG1747 COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA Function unknown 15618786 Common ybcL hypothetical protein CPn0877 129 COG1881 COG1881, Phospholipid-binding protein General function prediction only 15618410 Pathogen - hypothetical protein CPn0499 2 None None None 15617944 Pathogen - putative outer membrane protein CPn0020 3 None None None 15618532 Common - hypothetical protein CPn0622 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618727 Pathogen - putative outer membrane protein CPn0818 3 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 15618720 Common lcrH_1 Low Calcium Response Protein H CPn0811 15 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15618850 Common mutS DNA mismatch repair protein CPn0941 203 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 15618857 Common glgA glycogen synthase CPn0948 124 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 15618947 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase CPn1039 227 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 15618505 Common - hypothetical protein CPn0595 8 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 15618571 Common mip FKBP-type peptidyl-prolyl cis-trans isomerase CPn0661 131 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 15618660 Pathogen - hypothetical protein CPn0751 2 None None None 15618365 Pathogen pmp_12 Polymorphic Outer Membrane Protein (truncated) A/I Family CPn0452 2 None None None 15618940 Common - hypothetical protein CPn1032 4 COG1945 COG1945, Uncharacterized conserved protein Function unknown 15618318 Common yceC predicted pseudouridine synthetase family CPn0403 178 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 15618976 Common rnhB_2 ribonuclease HIII CPn1068 34 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 15618311 Common yhfO NifS-related aminotransferase CPn0396 222 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 15618158 Pathogen - hypothetical protein CPn0234 3 None None None 15618276 Common tyrS tyrosyl-tRNA synthetase CPn0361 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618306 Pathogen - hypothetical protein CPn0391 1 None None None 15618949 Common bioA Adenosylmethionine-8-Amino-7-Oxononanoate Aminotransferase CPn1041 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 15618890 Common yigN hypothetical protein CPn0982 110 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 15618049 Pathogen - hypothetical protein CPn0125 1 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 15617987 Pathogen - hypothetical protein CPn0063 1 None None None 15618587 Pathogen - hypothetical protein CPn0677 1 None None None 15618964 Pathogen - hypothetical protein CPn1056 1 None None None 15618282 Pathogen - hypothetical protein CPn0367 2 None None None 15618788 Common yycJ metal dependent hydrolase CPn0879 60 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 15618585 Pathogen - hypothetical protein CPn0675 2 None None None 15618497 Common yvyD hypothetical protein CPn0587 6 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 15618711 Common trpS tryptophanyl-tRNA synthetase CPn0802 249 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618205 Pathogen - hypothetical protein CPn0285 1 None None None 15618514 Common fliY Glutamine Binding Protein CPn0604 73 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15618638 Pathogen - hypothetical protein CPn0728 2 None None None 15618713 Pathogen gp6D CHLTR Plasmid Paralog CPn0804 3 None None None 15618217 Common fabD acyl-carrier-protein S-malonyltransferase CPn0297 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 15618684 Common yggV putative deoxyribonucleotide triphosphate pyrophosphatase CPn0775 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 15618554 Common rplB 50S ribosomal protein L2 CPn0644 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 15618929 Common lcrH_2 Low Calcium Response Protein H CPn1021 11 None None None 15618561 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase CPn0651 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 15618931 Pathogen - hypothetical protein CPn1023 1 None None None 15618559 Common fmt methionyl-tRNA formyltransferase CPn0649 217 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 15618027 Common cydB Cytochrome Oxidase Subunit II CPn0103 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 15618133 Pathogen - hypothetical protein CPn0209 1 None None None 15618736 Pathogen - hypothetical protein CPn0827 3 None None None 15618067 Common yxjG_1 hypothetical protein CPn0143 51 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 15618381 Pathogen pmp_17.3 Polymorphic Outer Membrane Protein (Frame-shift with CPn0469) CPn0470 2 None None None 15618303 Common glgX Glycogen Hydrolase (debranching) CPn0388 169 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 15618433 Pathogen hemD uroporphyrinogen-III synthase CPn0522 3 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 15618485 Common - hypothetical protein CPn0574 10 None None None 15618909 Common yfhC cytosine deaminase CPn1001 211 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 15618042 Common rplS 50S ribosomal protein L19 CPn0118 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 15618808 Common murF Muramoyl-DAP Ligase CPn0899 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 15618981 Pathogen - putative outer membrane protein CPn1073 2 None None None 15618703 Common - hypothetical protein CPn0794 7 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 15618344 Common nqr4 Na(+)-translocating NADH-quinone reductase subunit D CPn0429 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 15618118 Common gcp_2 O-sialoglycoprotein endopeptidase CPn0194 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 15618705 Common - hypothetical protein CPn0796 15 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 15618111 Common - predicted methylase CPn0187 27 COG0500 SmtA, SAM-dependent methyltransferases Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15618913 Pathogen - hypothetical protein CPn1005 2 None None None 15618867 Pathogen - hypothetical protein CPn0960 3 None None None 15618173 Common - hypothetical protein CPn0249 97 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 15618578 Pathogen - hypothetical protein CPn0668 3 COG4105 ComL, DNA uptake lipoprotein General function prediction only 15618544 Common rpsH 30S ribosomal protein S8 CPn0634 216 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 15618900 Common rplT 50S ribosomal protein L20 CPn0992 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 15618731 Pathogen - hypothetical protein CPn0822 2 None None None 15618396 Pathogen - hypothetical protein CPn0485 1 None None None 15618693 Common exbD Biopolymer Transport Protein CPn0784 50 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 15618354 Pathogen - hypothetical protein CPn0439 1 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 15618844 Pathogen rpmH 50S ribosomal protein L34 CPn0935 2 None None None 15618198 Common - conserved outer membrane lipoprotein protein CPn0278 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 15618378 Pathogen - hypothetical protein CPn0465 1 None None None 15618006 Common rpoC DNA-directed RNA polymerase subunit beta' CPn0082 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 15618855 Common glyQ Glycyl tRNA Synthetase CPn0946 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 15618243 Common lcrD Low Calcium Response D CPn0323 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 15618055 Pathogen - hypothetical protein CPn0131 1 None None None 15618294 Pathogen - hypothetical protein CPn0379 3 None None None 15618574 Pathogen - hypothetical protein CPn0664 1 None None None 15618035 Pathogen - hypothetical protein CPn0111 3 None None None 15618157 Pathogen - hypothetical protein CPn0233 1 None None None 15618117 Common argR Arginine Repressor CPn0193 80 COG1438 ArgR, Arginine repressor Transcription 15618231 Common lgt prolipoprotein diacylglyceryl transferase CPn0311 166 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 15618200 Common dppF_1 Dipeptide Transporter ATPase CPn0280 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 15618175 Common - hypothetical protein CPn0251 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 15618783 Pathogen - hypothetical protein CPn0874 2 None None None 15618959 Pathogen - hypothetical protein CPn1051 1 None None None 15618440 Common lpxK tetraacyldisaccharide 4'-kinase CPn0529 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 15618799 Common hemE uroporphyrinogen decarboxylase CPn0890 175 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 15618139 Common - hypothetical protein CPn0215 4 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618945 Common aroC chorismate synthase CPn1037 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 15618874 Common pgm Phosphoglucomutase CPn0967 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 15618268 Pathogen - hypothetical protein CPn0353 1 None None None 15618603 Common - hypothetical protein CPn0693 150 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15618494 Common atoS 2-Component Sensor CPn0584 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 15618936 Common mdhC malate dehydrogenase CPn1028 119 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 15618763 Pathogen porB Outer Membrane Protein B CPn0854 2 None None None 15618548 Common rpsQ 30S ribosomal protein S17 CPn0638 225 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 15618888 Common - hypothetical protein CPn0980 148 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 15618516 Common - hypothetical protein CPn0606 15 COG1768 COG1768, Predicted phosphohydrolase General function prediction only 15618656 Common - hypothetical protein CPn0746 14 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 15618366 Common pmp_13 Polymorphic Outer Membrane Protein G Family CPn0453 15 None None None 15618482 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase CPn0571 210 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 15618382 Common pmp_18 Polymorphic Outer Membrane Protein E/F Family CPn0471 3 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15618742 Common lpdA dihydrolipoamide dehydrogenase CPn0833 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15618469 Pathogen omcA 9 kDa-Cysteine-Rich Lipoprotein CPn0558 2 None None None 15618726 Common gspF General Secretion Protein F CPn0817 141 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 15618014 Pathogen atpD V-type ATP synthase subunit D CPn0090 8 COG1394 NtpD, Archaeal/vacuolar-type H+-ATPase subunit D Energy production and conversion 15618447 Common dagA_1 D-Ala/Gly Permease CPn0536 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 15618970 Common xseA exodeoxyribonuclease VII large subunit CPn1062 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 15618240 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase CPn0320 210 COG0196 RibF, FAD synthase Coenzyme metabolism 15618671 Common recA recombinase A CPn0762 214 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 15618530 Common ruvA Holliday junction DNA helicase motor protein CPn0620 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 15618619 Pathogen - hypothetical protein CPn0709 3 None None None 15618683 Pathogen - hypothetical protein CPn0774 2 None None None 15618373 Pathogen - hypothetical protein CPn0460 1 None None None 15618815 Common - hypothetical protein CPn0906 56 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 15618594 Common parB Chromosome Partitioning Protein CPn0684 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 15618235 Common rpsA 30S ribosomal protein S1 CPn0315 216 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 15618820 Common - hypothetical protein CPn0911 83 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 15618086 Pathogen - hypothetical protein CPn0162 1 None None None 15617938 Pathogen - hypothetical protein CPn0009 1 None None None 15618537 Common rs11 30S ribosomal protein S11 CPn0627 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 15618643 Common rpsD 30S ribosomal protein S4 CPn0733 224 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 15618663 Common rpsT 30S ribosomal protein S20 CPn0754 85 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 15618610 Common - hypothetical protein CPn0700 14 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 15618866 Common cafE Axial Filament Protein CPn0959 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 15618429 Pathogen - hypothetical protein CPn0518 3 None None None 15618836 Pathogen - CHLPS 43 kDa protein homolog_2 CPn0927 2 None None None 15618150 Pathogen - hypothetical protein CPn0226 1 None None None 15618308 Pathogen - hypothetical protein CPn0393 3 None None None 15618066 Pathogen - hypothetical protein CPn0142 1 None None None 15618415 Common vacB ribonuclease family CPn0504 192 COG0557 VacB, Exoribonuclease R Transcription 15618695 Common dsbD Thio:disulfide Interchange Protein CPn0786 119 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 15617939 Pathogen - hypothetical protein CPn0010 1 None None None 15618688 Pathogen - hypothetical protein CPn0779 3 None None None 15618356 Pathogen - hypothetical protein CPn0441 3 None None None 15618397 Common - putative proline permease CPn0486 55 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 15618422 Common rsbV_1 Sigma Regulatory Factor CPn0511 47 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 15618654 Common hemB delta-aminolevulinic acid dehydratase CPn0744 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 15618438 Common sucB_2 branched-chain alpha-keto acid dehydrogenase subunit E2 CPn0527 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15618910 Common - hypothetical protein CPn1002 4 None None None 15618057 Pathogen - hypothetical protein CPn0133 2 None None None 15618846 Common rpsN 30S ribosomal protein S14 CPn0937 212 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 15618758 Common - SWI/SNF family helicase_2 CPn0849 159 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 15618449 Pathogen - hypothetical protein CPn0538 2 COG4980 GvpP, Gas vesicle protein General function prediction only 15618442 Common - SAM dependent methyltransferase CPn0531 104 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 15618393 Common artJ Arginine Periplasmic Binding Protein CPn0482 160 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15618333 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CPn0418 213 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 15618613 Common - S/T Protein Kinase CPn0703 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 15618005 Common rpoB DNA-directed RNA polymerase subunit beta CPn0081 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 15618218 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III CPn0298 209 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 15618886 Pathogen - hypothetical protein CPn0978 1 None None None 15618708 Common - hypothetical protein CPn0799 12 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 15618401 Common - hypothetical protein CPn0490 17 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 15617972 Common yqfF conserved hypothetical inner membrane protein CPn0048 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 15618737 Common yscJ Yop proteins translocation lipoprotein J CPn0828 51 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 15618253 Pathogen - LtuB Protein CPn0333 2 None None None 15618545 Common rplE 50S ribosomal protein L5 CPn0635 243 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 15618040 Common rpsP 30S ribosomal protein S16 CPn0116 195 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 15618907 Common pnp polynucleotide phosphorylase/polyadenylase CPn0999 237 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 15618168 Common adk adenylate kinase CPn0244 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 15617990 Pathogen - hypothetical protein CPn0066 2 None None None 15617997 Common infA translation initiation factor IF-1 CPn0073 213 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 15618375 Pathogen - hypothetical protein CPn0462 1 None None None 15618092 Pathogen - hypothetical protein CPn0168 1 None None None 15618273 Pathogen - hypothetical protein CPn0358 1 None None None 15618143 Common tgt queuine tRNA-ribosyltransferase CPn0219 229 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 15618207 Pathogen - hypothetical protein CPn0287 2 None None None 15618921 Common fumC fumarate hydratase CPn1013 230 COG0114 FumC, Fumarase Energy production and conversion 15618583 Pathogen - hypothetical protein CPn0673 1 None None None 15618280 Pathogen - hypothetical protein CPn0365 1 None None None 15618552 Common rplV 50S ribosomal protein L22 CPn0642 201 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 15618181 Common ydaO PP-Loop Superfamily ATPase CPn0261 161 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 15618728 Pathogen - hypothetical protein CPn0819 2 None None None 15618979 Pathogen - hypothetical protein CPn1071 1 None None None 15618550 Common rplP 50S ribosomal protein L16 CPn0640 217 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 15618187 Pathogen - hypothetical protein CPn0267 1 None None None 15618025 Common ybbP hypothetical protein CPn0101 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 15618568 Pathogen - hypothetical protein CPn0658 3 None None None 15618563 Common lnt apolipoprotein N-acyltransferase CPn0653 152 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 15618325 Common dnaQ_1 DNA polymerase III subunit epsilon CPn0410 181 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 15618524 Common adt_2 ADP/ATP Translocase CPn0614 9 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 15618289 Common - hypothetical protein CPn0374 151 COG1496 COG1496, Uncharacterized conserved protein Function unknown 15617970 Pathogen - hypothetical protein CPn0046 1 None None None 15618107 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit CPn0183 170 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 15618464 Pathogen - hypothetical protein CPn0553 1 None None None 15618678 Common topA DNA topoisomerase I/SWI domain fusion protein CPn0769 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 15618180 Common secA_1 Protein Translocase Subunit CPn0260 7 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 15618047 Common recD_1 Exodeoxyribonuclease V (Alpha Subunit) CPn0123 148 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 15618228 Pathogen - hypothetical protein CPn0308 1 None None None 15617941 Pathogen - hypothetical protein CPn0011 1 None None None 15617979 Pathogen - hypothetical protein CPn0055 2 None None None 15618213 Common - hypothetical protein CPn0293 10 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 15618572 Common aspS aspartyl-tRNA synthetase CPn0662 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618349 Pathogen - hypothetical protein CPn0434 3 None None None 15618313 Pathogen - hypothetical protein CPn0398 1 None None None 15618790 Pathogen - hypothetical protein CPn0881 1 None None None 15618665 Common rpoD RNA polymerase sigma factor RpoD CPn0756 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 15618881 Common sucC succinyl-CoA synthetase subunit beta CPn0973 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 15618109 Common rpe ribulose-phosphate 3-epimerase CPn0185 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 15617991 Pathogen - hypothetical protein CPn0067 1 COG3247 HdeD, Uncharacterized conserved protein Function unknown 15618625 Common gyrB_2 DNA topoisomerase IV subunit B CPn0715 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 15618938 Common - predicted D-amino acid dehyrogenase CPn1030 30 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15618384 Pathogen - hypothetical protein CPn0473 1 None None None 15618285 Pathogen - hypothetical protein CPn0370 2 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 15618781 Common ribA/ribB bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein CPn0872 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 15618590 Common ygo4 Phosphate Permease CPn0680 172 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 15618254 Pathogen - hypothetical protein CPn0334 2 None None None 15618971 Common tpiA triosephosphate isomerase CPn1063 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 15618368 Pathogen - hypothetical protein CPn0455 1 None None None 15618797 Common hemG protoporphyrinogen oxidase CPn0888 37 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 15618147 Pathogen - hypothetical protein CPn0223 1 None None None 15618078 Common gseA 3-deoxy-D-manno-octulosonic-acid transferase CPn0154 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 15618271 Pathogen - hypothetical protein CPn0356 1 None None None 15618746 Common nth endonuclease III CPn0837 237 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 15618604 Common pbp2 PBP2-transglycolase/transpeptidase CPn0694 179 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 15618391 Pathogen - hypothetical protein CPn0480 2 None None None 15618245 Pathogen sycE Secretion Chaperone CPn0325 3 None None None 15618744 Common - SWI/SNF family helicase_1 CPn0835 136 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 15618958 Common dapA dihydrodipicolinate synthase CPn1050 224 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 15618645 Common - uridine kinase CPn0735 84 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 15618296 Pathogen - hypothetical protein CPn0381 2 None None None 15618194 Common gyrA_1 DNA gyrase subunit A CPn0274 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 15618358 Pathogen - hypothetical protein CPn0443 2 COG1287 COG1287, Uncharacterized membrane protein, required for N-linked glycosylation General function prediction only 15618943 Common aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein CPn1035 197 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 15618083 Pathogen - hypothetical protein CPn0159 1 None None None 15618163 Common devB 6-phosphogluconolactonase CPn0239 110 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 15618223 Pathogen - hypothetical protein CPn0303 2 None None None 15618159 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase CPn0235 143 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 15618724 Common gspD General Secretion Protein D CPn0815 135 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 15618535 Common rplQ 50S ribosomal protein L17 CPn0625 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 15618246 Common malQ Glucanotransferase CPn0326 120 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 15618336 Common mraW S-adenosyl-methyltransferase MraW CPn0421 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 15618428 Pathogen - hypothetical protein CPn0517 1 None None None 15618834 Pathogen - hypothetical protein CPn0925 2 None None None 15618261 Common ytgD Integral Membrane Protein CPn0346 129 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15618825 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II CPn0916 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15618038 Common hemK N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase CPn0114 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 15618753 Common engA GTP-binding protein EngA CPn0844 221 COG1160 COG1160, Predicted GTPases General function prediction only 15618152 Common dsbG Disulfide Bond Chaperone CPn0228 18 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 15618771 Common yfhO_2 NifS-related Aminotransferase CPn0862 167 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 15618023 Pathogen - hypothetical protein CPn0099 1 None None None 15618804 Common efp_2 elongation factor P CPn0895 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 15618238 Common rbfA ribosome-binding factor A CPn0318 132 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 15618796 Pathogen - CHLTR possible phosphoprotein CPn0887 2 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 15618125 Common oppD Oligopeptide Transport ATPase CPn0201 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618617 Common yscN type III secretion system ATPase CPn0707 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 15618652 Pathogen - hypothetical protein CPn0742 2 None None None 15618064 Common yqdE hypothetical protein CPn0140 53 COG1259 COG1259, Uncharacterized conserved protein Function unknown 15618518 Common - Uridine 5'-Monophosphate Synthase CPn0608 78 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 15618098 Pathogen - hypothetical protein CPn0174 1 None None None 15618778 Pathogen - hypothetical protein CPn0869 2 None None None 15618813 Common murG N-acetylglucosaminyl transferase CPn0904 207 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 15618406 Common aspC L,L-diaminopimelate aminotransferase CPn0495 234 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15618084 Common pfkA_1 diphosphate--fructose-6-phosphate 1-phosphotransferase CPn0160 131 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 15618681 Common uvrD DNA Helicase CPn0772 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 161353776 Common rplC 50S ribosomal protein L3 CPn0647 211 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 15617936 Common - hypothetical protein CPn0007 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618592 Common dppD ABC ATPase Dipeptide Transport CPn0682 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618827 Common ppa inorganic pyrophosphatase CPn0918 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 15618237 Common infB translation initiation factor IF-2 CPn0317 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 15618892 Common nrdA ribonucleotide-diphosphate reductase subunit alpha CPn0984 227 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 15618481 Common argS arginyl-tRNA synthetase CPn0570 248 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15617982 Common accD acetyl-CoA carboxylase subunit beta CPn0058 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 15617989 Pathogen - hypothetical protein CPn0065 2 None None None 15618178 Pathogen - hypothetical protein CPn0256 2 None None None 15618983 Common guaB_2 Inosine 5'-monophosphase dehydrogenase CPn0172a 219 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 15618166 Pathogen - hypothetical protein CPn0242 1 None None None 15618739 Pathogen - hypothetical protein CPn0830 1 None None None 15618894 Common trmB tRNA (guanine-N(7))-methyltransferase CPn0986 169 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 15618003 Common rplJ 50S ribosomal protein L10 CPn0079 131 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 15618403 Pathogen - hypothetical protein CPn0492 1 None None None 15618141 Common ypdP hypothetical protein CPn0217 26 COG1738 COG1738, Uncharacterized conserved protein Function unknown 15618338 Common - hypothetical protein CPn0423 4 COG2912 COG2912, Uncharacterized conserved protein Function unknown 15618115 Common glnQ ABC Amino Acid Transporter ATPase CPn0191 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 15618331 Common himD Integration Host Factor Alpha CPn0416 162 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 15618755 Common clpX ATP-dependent protease ATP-binding subunit CPn0846 225 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 15618351 Common lplA_1 Lipoate Protein Ligase-Like Protein CPn0436 22 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 15618501 Common yagE YagE family CPn0591 16 COG1723 COG1723, Uncharacterized conserved protein Function unknown 15618051 Common ytfF Cationic Amino Acid Transporter CPn0127 34 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15618028 Common - hypothetical protein CPn0104 7 None None None 15618386 Common glgB glycogen branching enzyme CPn0475 149 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 15618473 Pathogen - CHLPS 43 kDa protein homolog_1 CPn0562 2 None None None 15618579 Pathogen - hypothetical protein CPn0669 3 None None None 15617950 Pathogen - hypothetical protein CPn0026 1 None None None 15618153 Common - hypothetical protein CPn0229 12 None None None 15618059 Common groES co-chaperonin GroES CPn0135 213 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 15617956 Common dnaJ Heat Shock Protein J CPn0032 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 15617951 Common lon Lon ATP-dependent Protease CPn0027 220 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 15618033 Common ileS isoleucyl-tRNA synthetase CPn0109 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15617995 Common - hypothetical protein CPn0071 15 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 15618565 Common dnaQ_2 DNA polymerase III subunit epsilon CPn0655 193 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 15617947 Common yjjK ABC Transporter Protein ATPase CPn0023 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 15618977 Common yfgA HTH Transcriptional Regulator CPn1069 41 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 15618667 Common folP Dihydropteroate Synthase CPn0758 220 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 15618627 Pathogen - hypothetical protein CPn0717 2 None None None 15617974 Pathogen - hypothetical protein CPn0050 1 None None None 15618315 Pathogen - hypothetical protein CPn0400 3 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 15618853 Pathogen - hypothetical protein CPn0944 1 None None None 15618609 Common frr ribosome recycling factor CPn0699 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 15618287 Pathogen - hypothetical protein CPn0372 1 None None None 15618521 Common coaE dephospho-CoA kinase CPn0611 201 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 15618864 Common ide Insulinase family/Protease III CPn0957 153 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 15618137 Pathogen - hypothetical protein CPn0213 1 None None None 15617975 Pathogen - hypothetical protein CPn0051 1 None None None 15618185 Common ubiA prenyltransferase CPn0265 118 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 15618761 Pathogen - hypothetical protein CPn0852 2 None None None 15618209 Common aaaT Neutral Amino Acid (Glutamate) Transporter CPn0289 158 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 15618045 Pathogen - hypothetical protein CPn0121 2 None None None 15618013 Common atpB V-type ATP synthase subunit B CPn0089 247 COG1156 NtpB, Archaeal/vacuolar-type H+-ATPase subunit B Energy production and conversion 15618478 Common cdsA Phosphatidate Cytidylytransferase CPn0567 139 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 15617960 Pathogen - hypothetical protein CPn0036 3 None None None 15617993 Pathogen - hypothetical protein CPn0069 1 None None None 15618926 Pathogen - hypothetical protein CPn1018 2 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15618581 Pathogen - hypothetical protein CPn0671 3 None None None 15617961 Common ptsH PTS Phosphocarrier Protein Hpr CPn0037 73 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 15618876 Common tyrP_1 Tyrosine Transport CPn0969 35 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 15618327 Pathogen - hypothetical protein CPn0412 2 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 15618458 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CPn0547 168 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 15618718 Pathogen - hypothetical protein CPn0809 2 COG5665 NOT5, CCR4-NOT transcriptional regulation complex, NOT5 subunit Transcription 15618923 Common - hypothetical protein CPn1015 37 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 15618444 Common - hypothetical protein CPn0533 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 15618968 Common tktB_2 1-deoxy-D-xylulose-5-phosphate synthase CPn1060 208 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 15618716 Common - hypothetical protein CPn0807 64 COG2510 COG2510, Predicted membrane protein Function unknown 15618928 Pathogen - hypothetical protein CPn1020 2 None None None 15617962 Common ptsI PTS PEP Phosphotransferase CPn0038 229 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 15618555 Common rplW 50S ribosomal protein L23 CPn0645 71 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 15618370 Pathogen - hypothetical protein CPn0457 1 None None None 15618432 Common glyA serine hydroxymethyltransferase CPn0521 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 15618010 Pathogen atpE V-type ATP synthase subunit E CPn0086 4 COG1390 NtpE, Archaeal/vacuolar-type H+-ATPase subunit E Energy production and conversion 15618122 Common oppA_4 Oligopeptide Binding Protein CPn0198 192 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15618649 Common - hypothetical protein CPn0739 13 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 15618460 Common rpsJ 30S ribosomal protein S10 CPn0549 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 15618905 Common mesJ PP-loop superfamily ATPase CPn0997 215 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 15618932 Common xerD site-specific tyrosine recombinase XerD CPn1024 227 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15618925 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CPn1017 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 15617965 Pathogen - hypothetical protein CPn0041 1 None None None 15618760 Common pckA phosphoenolpyruvate carboxykinase CPn0851 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 15618637 Pathogen - hypothetical protein CPn0727 2 None None None 15618225 Common pdhB Pyruvate Dehydrogenase Beta CPn0305 212 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 15618328 Common msbA Transport ATP Binding Protein CPn0413 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15618965 Common - hypothetical protein CPn1057 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 15618277 Common rpsD RNA polymerase sigma factor sigma-28 CPn0362 212 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 15618709 Common eno phosphopyruvate hydratase CPn0800 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 15618504 Common pheT phenylalanyl-tRNA synthetase subunit beta CPn0594 233 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 15618863 Common - hypothetical protein CPn0956 16 None None None 15618202 Common xasA Amino Acid Transporter CPn0282 114 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15618767 Common fliI type III secretion system ATPase CPn0858 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 15617977 Common sms DNA repair protein RadA CPn0053 202 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 161353778 Common pknD serine/threonine-protein kinase CPn0095 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 15618696 Common yabD PHP superfamily (urease/pyrimidinase) hydrolase CPn0787 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 15618345 Common nqr5 Na(+)-translocating NADH-quinone reductase subunit E CPn0430 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 15618140 Pathogen - hypothetical protein CPn0216 1 None None None 15618412 Common hrcA heat-inducible transcription repressor CPn0501 149 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 15618577 Pathogen - hypothetical protein CPn0667 3 None None None 15617954 Pathogen gcp_1 O-Sialoglycoprotein Endopeptidase CPn0030 2 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 15618975 Common def peptide deformylase CPn1067 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 15618818 Common rsbV_2 Sigma Regulatory Factor CPn0909 49 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 15618973 Pathogen - hypothetical protein CPn1065 1 None None None 15618858 Common ctc 50S ribosomal protein L25/general stress protein Ctc CPn0949 143 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 15618379 Common pmp_15 Polymorphic Outer Membrane Protein E Family CPn0466 6 None None None 15618646 Common ygeD Efflux Protein CPn0736 73 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15618685 Common - hypothetical protein CPn0776 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 15618026 Common cydA Cytochrome Oxidase Subunit I CPn0102 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 15618471 Common gltX glutamyl-tRNA synthetase CPn0560 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 15618353 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CPn0438 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 15618387 Pathogen - hypothetical protein CPn0476 3 None None None 15618061 Common ybgI ACR family CPn0137 104 COG0327 COG0327, Uncharacterized conserved protein Function unknown 15618698 Common sdhA succinate dehydrogenase flavoprotein subunit CPn0789 223 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 15618317 Common mutY Adenine Glycosylase CPn0402 233 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 15618848 Common - hypothetical protein CPn0939 9 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 15618539 Common secY preprotein translocase subunit SecY CPn0629 216 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 15618174 Common rpmG 50S ribosomal protein L33 CPn0250 46 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 15618076 Common - hypothetical protein CPn0152 20 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 15618007 Common tal transaldolase B CPn0083 177 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 15618747 Common trmE tRNA modification GTPase TrmE CPn0838 227 COG0486 ThdF, Predicted GTPase General function prediction only 15618283 Pathogen - hypothetical protein CPn0368 1 None None None 15618841 Common cysS cysteinyl-tRNA synthetase CPn0932 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618630 Common - hypothetical protein CPn0720 57 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 15618161 Common yggF Holliday junction resolvase-like protein CPn0237 114 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 15618052 Common - Biotin Protein Ligase CPn0128 6 COG4285 COG4285, Uncharacterized conserved protein Function unknown 15618525 Common pgsA_1 Glycerol-3-P Phosphatidyltransferase CPn0615 91 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15618264 Common ytgA Solute Protein Binding Family CPn0349 132 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 15618196 Pathogen - hypothetical protein CPn0276 3 None None None 15618980 Pathogen - hypothetical protein CPn1072 2 None None None 15618110 Common - IncA CPn0186 56 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618446 Common lspA lipoprotein signal peptidase CPn0535 177 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 15618702 Common rbsU sigma regulatory family protein - PP2C phosphatase (RsbW antagonist) CPn0793 87 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 15618134 Pathogen - hypothetical protein CPn0210 1 None None None 15618730 Pathogen - hypothetical protein CPn0821 2 None None None 15618914 Pathogen - hypothetical protein CPn1006 2 None None None 15618309 Common tlyC_1 CBS Domain protein (Hemolysin Homolog) CPn0394 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15618000 Common nusG transcription antitermination protein NusG CPn0076 214 COG0250 NusG, Transcription antiterminator Transcription 15618829 Common cysQ Sulfite Synthesis/biphosphate phosphatase CPn0920 145 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 15618302 Pathogen - hypothetical protein CPn0387 3 None None None 15618465 Pathogen - hypothetical protein CPn0554 1 None None None 15618262 Common ytgC Integral Membrane Protein CPn0347 145 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15618498 Pathogen - hypothetical protein CPn0588 4 None None None 15618021 Common pyk pyruvate kinase CPn0097 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 15618780 Common ribD Riboflavin Deaminase CPn0871 230 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 15618227 Common glgP Glycogen Phosphorylase CPn0307 146 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 15618082 Pathogen - hypothetical protein CPn0158 1 None None None 15618650 Common tyrB aromatic amino acid aminotransferase CPn0740 83 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15618326 Common - hypothetical protein CPn0411 35 COG2107 COG2107, Predicted periplasmic solute-binding protein General function prediction only 15618131 Common ybhI Dicarboxylase Translocator CPn0207 111 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 15618097 Pathogen - hypothetical protein CPn0173 1 None None None 15618128 Pathogen - hypothetical protein CPn0204 1 None None None 15618687 Common ahpC Thio-specific Antioxidant (TSA) Peroxidase CPn0778 230 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 15618745 Common brnQ Amino Acid (Branched) Transport CPn0836 49 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 15618939 Common arcD Arginine/Ornithine Antiporter CPn1031 125 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15618408 Common - hypothetical protein CPn0497 86 COG1872 COG1872, Uncharacterized conserved protein Function unknown 15618800 Common mfd Transcription-Repair Coupling CPn0891 220 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 15617934 Common pmp_1 Polymorphic Outer Membrane Protein G Family CPn0005 6 None None None 15618424 Common - hypothetical protein CPn0513 81 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 15618531 Common ruvC Holliday junction resolvase CPn0621 197 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 15618776 Common rodA Rod Shape Protein CPn0867 205 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 15618672 Common ygfA Formyltetrahydrofolate Cycloligase CPn0763 134 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 15618190 Common ywlC SuA5 Superfamily-related Protein CPn0270 209 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 15618156 Common - similarity to 5'-Methylthioadenosine Nucleosidase CPn0232 23 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 15618824 Common ybeB IojAP superfamily ortholog CPn0915 199 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 15618644 Common yceA hypothetical protein CPn0734 113 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 15617930 Pathogen - hypothetical protein CPn0001 2 COG2155 COG2155, Uncharacterized conserved protein Function unknown 15617958 Pathogen - hypothetical protein CPn0034 1 None None None 15618414 Common dnaK molecular chaperone DnaK CPn0503 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 15618666 Common folX Dihydroneopterin Aldolase CPn0757 6 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 15618542 Common rplR 50S ribosomal protein L18 CPn0632 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 15618074 Pathogen - hypothetical protein CPn0150 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618493 Pathogen - hypothetical protein CPn0583 2 None None None 15618632 Pathogen - hypothetical protein CPn0722 2 None None None 15618839 Pathogen - hypothetical protein CPn0930 1 None None None 15618321 Common fabI enoyl-(acyl carrier protein) reductase CPn0406 195 COG0623 FabI, Enoyl- acyl-carrier-protein 15618832 Common bioF_1 8-amino-7-oxononanoate synthase CPn0923 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 15618453 Common - ABC Transporter ATPase CPn0542 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 15618596 Pathogen - hypothetical protein CPn0686 1 None None None 15618896 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase CPn0988 192 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 15618743 Pathogen - hypothetical protein CPn0834 2 None None None 15617935 Pathogen - hypothetical protein CPn0006 1 None None None 15618232 Pathogen - hypothetical protein CPn0312 2 None None None 15618299 Pathogen hctB Histone-like Protein 2 CPn0384 1 None None None 15618851 Common dnaG DNA primase CPn0942 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 15618691 Common tolB translocation protein TolB CPn0782 141 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 15618519 Pathogen - hypothetical protein CPn0609 2 None None None 15618898 Common infC translation initiation factor IF-3 CPn0990 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 15618031 Pathogen - hypothetical protein CPn0107 2 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 15618248 Common - hypothetical protein CPn0328 152 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 15618872 Common lpxB lipid-A-disaccharide synthase CPn0965 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 15618607 Common tsf elongation factor Ts CPn0697 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 15618754 Common pcnB_1 Poly A Polymerase CPn0845 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 15618390 Common phnP Metal Dependent Hydrolase CPn0479 89 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 15618951 Common bioF_2 Oxononanoate Synthase CPn1043 190 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 15618362 Common pmp_9 Polymorphic Outer Membrane Protein G/I Family CPn0447 26 None None None 15618919 Common - hypothetical protein CPn1011 8 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 15618511 Pathogen - hypothetical protein CPn0601 2 None None None 15618039 Common ffh Signal Recognition Particle GTPase CPn0115 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 15618214 Common - cAMP-Dependent Protein Kinase Regulatory Subunit CPn0294 34 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 15618903 Pathogen - hypothetical protein CPn0995 3 COG0795 COG0795, Predicted permeases General function prediction only 15618292 Common sucB_1 dihydrolipoamide acetyltransferase CPn0377 193 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15618489 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPn0579 196 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 15618089 Pathogen - hypothetical protein CPn0165 1 None None None 15618622 Common - FHA domain; (homology to adenylate cyclase) CPn0712 14 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 15618941 Pathogen - hypothetical protein CPn1033 2 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 15618795 Pathogen hctA Histone-Like Developmental Protein CPn0886 4 None None None 15618877 Pathogen yccA_1 Transport Permease (truncated) CPn0969.1 2 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 15618145 Pathogen - hypothetical protein CPn0221 1 None None None 15618549 Pathogen rpmC 50S ribosomal protein L29 CPn0639 2 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 15618337 Pathogen - hypothetical protein CPn0422 2 None None None 15618347 Pathogen - hypothetical protein CPn0432 1 None None None 15618948 Common - hypothetical protein CPn1040 3 None None None 15618409 Pathogen - hypothetical protein CPn0498 1 None None None 15618588 Pathogen - hypothetical protein CPn0678 1 None None None 15618506 Common ada methyltransferase CPn0596 79 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 15618402 Common - hypothetical protein CPn0491 6 None None None 15617988 Pathogen - hypothetical protein CPn0064 1 None None None 15618668 Common folA Dihydrofolate Reductase CPn0759 132 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 15618132 Common pfkA_2 diphosphate--fructose-6-phosphate 1-phosphotransferase CPn0208 80 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 15618661 Common recD_2 Exodeoxyribonuclease V, Alpha CPn0752 127 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 15618560 Common lpxA UDP-N-acetylglucosamine acyltransferase CPn0650 180 COG1043 LpxA, Acyl- acyl carrier protein 15618319 Pathogen - hypothetical protein CPn0404 2 None None None 15618792 Common nqr6 Na(+)-translocating NADH-quinone reductase subunit F CPn0883 115 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 15618467 Pathogen crpA 15 kDa Cysteine-Rich Protein CPn0556 2 None None None 15618071 Pathogen - hypothetical protein CPn0147 1 None None None 15618714 Common minD chromosome partitioning ATPase CPn0805 230 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 15618553 Common rpsS 30S ribosomal protein S19 CPn0643 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 15618879 Common yccA_2 Transport Permease CPn0971 98 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 15618567 Common yjeE hypothetical protein CPn0657 165 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 15618562 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase CPn0652 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 15618963 Pathogen - hypothetical protein CPn1055 1 None None None 15618920 Common yzeB ABC transporter permease CPn1012 179 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 15618930 Pathogen - hypothetical protein CPn1022 2 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 15617964 Common dnaX_1 DNA polymerase III subunits gamma and tau CPn0040 246 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 15618586 Pathogen - hypothetical protein CPn0676 2 None None None 15617967 Pathogen - hypothetical protein CPn0043 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618719 Pathogen - hypothetical protein CPn0810 2 None None None 15618639 Pathogen - hypothetical protein CPn0729 3 None None None 15618496 Common atoC 2-Component Regulator CPn0586 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15618183 Common yqfU hypothetical protein CPn0263 76 COG1284 COG1284, Uncharacterized conserved protein Function unknown 15618712 Pathogen - hypothetical protein CPn0803 2 None None None 15618787 Common - SET Domain protein CPn0878 8 COG2940 COG2940, Proteins containing SET domain General function prediction only 15618570 Common spoU_2 rRNA Methylase CPn0660 180 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 15618216 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase CPn0296 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15618211 Pathogen incB Inclusion Membrane Protein B CPn0291 2 None None None 15618043 Common rnhB ribonuclease HII CPn0119 222 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 15618732 Common yscT Yop proteins translocation protein T CPn0823 72 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 15618692 Pathogen - hypothetical protein CPn0783 2 None None None 15618807 Common groEL_3 Heat shock protein-60 CPn0898 217 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15618448 Pathogen - hypothetical protein CPn0537 2 None None None 15618204 Pathogen - hypothetical protein CPn0284 1 None None None 15618908 Common rpsO 30S ribosomal protein S15 CPn1000 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 15618477 Common yaeS hypothetical protein CPn0566 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 15618523 Common sohB Protease CPn0613 188 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15618704 Common - hypothetical protein CPn0795 5 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 15617971 Pathogen - hypothetical protein CPn0047 1 None None None 15618091 Pathogen - hypothetical protein CPn0167 1 None None None 15618912 Pathogen - hypothetical protein CPn1004 2 None None None 15618484 Common yebC hypothetical protein CPn0573 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 15618068 Common clpB Clp Protease ATPase CPn0144 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 15618679 Pathogen - hypothetical protein CPn0770 3 None None None 15618982 Common prfB peptide chain release factor 2 CPn0575a 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 15618258 Common dnaN DNA polymerase III subunit beta CPn0338 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 15618434 Pathogen - hypothetical protein CPn0523 1 None None None 15618304 Pathogen - hypothetical protein CPn0389 3 None None None 15618105 Pathogen - hypothetical protein CPn0181 1 None None None 15618054 Pathogen - hypothetical protein CPn0130 1 None None None 15618733 Common yscS Yop proteins translocation protein S CPn0824 119 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 15618024 Common - hypothetical protein CPn0100 4 None None None 15618377 Pathogen - hypothetical protein CPn0464 1 None None None 15618355 Pathogen - hypothetical protein CPn0440 1 None None None 15618341 Pathogen - hypothetical protein CPn0426 2 None None None 15618843 Pathogen rnpA ribonuclease P CPn0934 2 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 15618197 Pathogen - hypothetical protein CPn0277 1 None None None 15618962 Pathogen - hypothetical protein CPn1054 1 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 15618765 Common - UDP-Glucose Pyrophosphorylase CPn0856 8 COG4284 COG4284, UDP-glucose pyrophosphorylase Carbohydrate transport and metabolism 15618399 Common ycfF HIT Family Hydrolase CPn0488 221 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 15618275 Common gnd 6-phosphogluconate dehydrogenase CPn0360 174 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 15618641 Pathogen - hypothetical protein CPn0731 1 None None None 15618822 Pathogen - hypothetical protein CPn0913 1 None None None 15618659 Common tctD HTH Transcriptional Regulatory Protein + Receiver Doman CPn0750 194 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15618281 Pathogen - hypothetical protein CPn0366 1 None None None 15618119 Common oppA_1 Oligopeptide Binding Protein CPn0195 181 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15618037 Common prfA peptide chain release factor 1 CPn0113 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 15618335 Pathogen - hypothetical protein CPn0420 3 None None None 15617943 Common pmp_2 Polymorphic Outer Membrane Protein G Family CPn0013 7 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15618072 Common - S/T Protein Kinase CPn0148 116 COG1262 COG1262, Uncharacterized conserved protein Function unknown 15618528 Common lplA_2 Lipoate-Protein Ligase A CPn0618 52 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 15618395 Common aroG 3-deoxy-7-phosphoheptulonate synthase CPn0484 186 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 15618103 Pathogen - hypothetical protein CPn0179 1 None None None 15618615 Pathogen - hypothetical protein CPn0705 2 None None None 15618491 Common - Phosphoglycolate Phosphatase CPn0581 54 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 15618868 Common rpmF 50S ribosomal protein L32 CPn0961 6 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 15618634 Pathogen - hypothetical protein CPn0724 2 None None None 15618837 Pathogen - CHLPS 43 kDa protein homolog_3 CPn0928 2 None None None 15618251 Pathogen - hypothetical protein CPn0331 2 None None None 15618861 Common rpsR 30S ribosomal protein S18 CPn0952 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 15618543 Common rplF 50S ribosomal protein L6 CPn0633 232 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 15618220 Common yaeT Omp85 Analog CPn0300 150 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 15618809 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase CPn0900 220 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 15618722 Common pepP Aminopeptidase P CPn0813 240 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 15617999 Pathogen secE preprotein translocase subunit SecE CPn0075 3 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 15618094 Pathogen - hypothetical protein CPn0170 2 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 15618229 Common dnaA chromosomal replication initiation protein CPn0309 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15617959 Common - hypothetical protein CPn0035 37 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 15618436 Common - hypothetical protein CPn0525 40 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 15618192 Common dnaX_2 DNA polymerase III subunit delta' CPn0272 211 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 15618080 Pathogen - hypothetical protein CPn0156 1 None None None 15617932 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A CPn0003 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 15618960 Pathogen - hypothetical protein CPn1052 1 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15618230 Common 60IM putative inner membrane protein translocase component YidC CPn0310 212 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 15618419 Pathogen - hypothetical protein CPn0508 3 None None None 15618475 Common secD/secF bifunctional preprotein translocase subunit SecD/SecF CPn0564 209 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 15618677 Common yohI predicted oxidoreductase CPn0768 212 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 15618126 Common oppF Oligopeptide Transport ATPase CPn0202 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618706 Common - hypothetical protein CPn0797 14 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 15618802 Common tktB_1 transketolase CPn0893 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 15618241 Common ychF translation-associated GTPase CPn0321 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 15618774 Pathogen - hypothetical protein CPn0865 2 None None None 15618487 Common - SWIB (YM74) complex protein CPn0577 16 COG5531 COG5531, SWIB-domain-containing proteins implicated in chromatin remodeling Chromatin structure and dynamics 15618934 Pathogen - LtuA Protein CPn1026 2 None None None 15618917 Common map methionine aminopeptidase CPn1009 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 15617986 Common - hypothetical protein CPn0062 3 None None None 15618380 Common pmp_16 Polymorphic Outer Membrane Protein E Family CPn0467 6 None None None 15618364 Common pmp_11 Polymorphic Outer Membrane Protein G Family CPn0451 13 None None None 15618199 Common - Possible ABC Transporter Permease Protein CPn0279 103 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 15618121 Common oppA_3 Oligopeptide Binding Protein CPn0197 144 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15618793 Common yajC preprotein translocase subunit YajC CPn0884 56 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 15618601 Common abcX ABC Transporter ATPase CPn0691 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 15618389 Common hflX GTP Binding Protein CPn0478 218 COG2262 HflX, GTPases General function prediction only 15618883 Pathogen - hypothetical protein CPn0975 1 None None None 15618513 Common hemH ferrochelatase CPn0603 165 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 15618323 Pathogen - hypothetical protein CPn0408 3 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 15618950 Common bioD dethiobiotin synthetase CPn1042 147 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 15618620 Pathogen - hypothetical protein CPn0710 2 None None None 15618856 Common pgsA_2 Glycerol-3-P Phosphatydyltransferase CPn0947 187 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15618451 Common pmp_20 polymorphic membrane protein B Family CPn0540 31 None None None 15618830 Common - snGlycerol-3-P Acyltransferase CPn0921 27 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15618171 Common rplM 50S ribosomal protein L13 CPn0247 227 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 15618160 Common pyrG CTP synthetase CPn0236 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 15618508 Common oppB_2 Oligopeptide Permease CPn0598 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618811 Common nlpD Muramidase (invasin repeat family) CPn0902 33 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 15618017 Pathogen - hypothetical protein CPn0093 3 None None None 15618674 Pathogen - hypothetical protein CPn0765 2 None None None 15618267 Pathogen - hypothetical protein CPn0352 1 None None None 15618242 Common yscU type III secretion system protein CPn0322 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 15618845 Common rpmJ 50S ribosomal protein L36 CPn0936 4 None None None 15618350 Common - Phospholipase D superfamily CPn0435 26 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15618114 Pathogen - hypothetical protein CPn0190 1 None None None 15618694 Common exbB Macromolecule transporter CPn0785 144 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 15618899 Common rpmI 50S ribosomal protein L35 CPn0991 111 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 15618056 Pathogen - hypothetical protein CPn0132 1 None None None 15618041 Common trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein CPn0117 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 15618906 Common ftsH ATP-dependent zinc protease CPn0998 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 15618167 Pathogen - hypothetical protein CPn0243 1 None None None 15618738 Pathogen - hypothetical protein CPn0829 1 None None None 15618885 Pathogen - hypothetical protein CPn0977 1 None None None 15618048 Pathogen - hypothetical protein CPn0124 1 None None None 15618305 Common ruvB Holliday junction DNA helicase B CPn0390 213 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 15618860 Common rpsF 30S ribosomal protein S6 CPn0951 102 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 15618188 Pathogen - hypothetical protein CPn0268 1 None None None 15618764 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CPn0855 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 15617968 Pathogen - hypothetical protein CPn0044 1 None None None 15618127 Pathogen - hypothetical protein CPn0203 1 None None None 15618182 Common surE stationary phase survival protein SurE CPn0262 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 15618784 Pathogen - hypothetical protein CPn0875 3 None None None 15618461 Common fusA elongation factor G CPn0550 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 15618773 Common yjbC predicted pseudouridine synthase CPn0864 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 15618725 Common gspE Genral Secretion Protein E CPn0816 217 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 15618189 Common - Dipeptidase CPn0269 76 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 15618569 Common trxA Thioredoxin CPn0659 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 15618735 Common yscL type III secretion system protein CPn0826 51 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 15618584 Common fmu RNA Methyltransferase CPn0674 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 15618435 Pathogen - hypothetical protein CPn0524 1 None None None 15618710 Common uvrB excinuclease ABC subunit B CPn0801 224 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 15618106 Common accC acetyl-CoA carboxylase biotin carboxylase subunit CPn0182 222 COG0439 AccC, Biotin carboxylase Lipid metabolism 15618717 Pathogen - hypothetical protein CPn0808 2 None None None 15618138 Pathogen - hypothetical protein CPn0214 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618657 Common ispA Geranyl Transtransferase CPn0748 238 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 15618450 Common pmp_19 polymorphic membrane protein A Family CPn0539 6 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15617969 Pathogen - hypothetical protein CPn0045 1 None None None 15618507 Common oppC_2 Oligopeptide Permease CPn0597 216 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618551 Common rpsC 30S ribosomal protein S3 CPn0641 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 15618206 Common mgtE Mg++ Transporter (CBS Domain) CPn0286 171 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 15617973 Pathogen - hypothetical protein CPn0049 1 None None None 15618558 Pathogen - hypothetical protein CPn0648 2 None None None 15618212 Pathogen incC Inclusion Membrane Protein C CPn0292 1 None None None 15618922 Common ychM Sulfate Transporter CPn1014 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 15618404 Pathogen - hypothetical protein CPn0493 1 None None None 15618324 Pathogen - hypothetical protein CPn0409 3 COG5465 COG5465, Uncharacterized conserved protein Function unknown 15618312 Common - PP2C phosphatase family CPn0397 137 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 15618969 Pathogen - hypothetical protein CPn1061 2 None None None 15618144 Pathogen - hypothetical protein CPn0220 1 None None None 15617942 Pathogen - hypothetical protein CPn0012 1 None None None 15618288 Common gcpE 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CPn0373 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 15618500 Pathogen - hypothetical protein CPn0590 2 None None None 15617949 Common atsA ribonuclease Z CPn0025 94 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 15618272 Pathogen - hypothetical protein CPn0357 1 None None None 15618901 Common pheS phenylalanyl-tRNA synthetase subunit alpha CPn0993 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 15617981 Common sodM Superoxide Dismutase (Mn) CPn0057 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 15618250 Pathogen - hypothetical protein CPn0330 2 None None None 15618564 Common yciA acyl-CoA Thioesterase CPn0654 135 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 15618367 Pathogen pmp_14 Polymorphic Outer Membrane Protein H Family CPn0454 2 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15618957 Common lysC aspartate kinase CPn1049 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 15618034 Common lepB Signal Peptidase I CPn0110 112 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 15618295 Common hemN_1 coproporphyrinogen III oxidase CPn0380 207 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 15618573 Common hisS histidyl-tRNA synthetase CPn0663 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618967 Common ksgA dimethyladenosine transferase CPn1059 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 15618201 Common dhnA fructose-bisphosphate aldolase CPn0281 63 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 15618803 Common amn AMP nucleosidase CPn0894 84 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 15618210 Common - Na-dependent Transporter CPn0290 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 15618452 Common - Solute binding protein CPn0541 155 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 15618322 Common - HAD superfamily hydrolase/phosphatase CPn0407 17 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 15618244 Pathogen lcrE Low Calcium Response E CPn0324 2 None None None 15618383 Pathogen - hypothetical protein CPn0472 1 None None None 15618430 Common dapF diaminopimelate epimerase CPn0519 199 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 15618791 Pathogen - hypothetical protein CPn0882 1 None None None 15618269 Pathogen - hypothetical protein CPn0354 1 None None None 15618193 Common tdk thymidylate kinase CPn0273 223 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 15617948 Common xerC site-specific tyrosine recombinase XerC CPn0024 229 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15618600 Common - ABC Transporter Membrane Protein CPn0690 176 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 15618515 Common yhhF predicted Methylase CPn0605 212 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 15618854 Pathogen - hypothetical protein CPn0945 2 None None None 15618483 Pathogen - hypothetical protein CPn0572 2 COG3889 COG3889, Predicted solute binding protein General function prediction only 15618176 Pathogen - hypothetical protein CPn0254 2 None None None 15618346 Pathogen - hypothetical protein CPn0431 1 None None None 15618626 Common gyrA_2 DNA topoisomerase IV subunit A CPn0716 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 15618769 Common fliF type III secretion system protein CPn0860 4 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 15618255 Common folD Methylene Tetrahydrofolate Dehydrogenase CPn0335 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 15618459 Common cysJ Sulfite Reductase CPn0548 97 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 15618880 Common ftsY Cell Division Protein FtsY CPn0972 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 15618374 Pathogen - hypothetical protein CPn0461 1 None None None 15618538 Common rpsM 30S ribosomal protein S13 CPn0628 242 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 15618779 Common serS seryl-tRNA synthetase CPn0870 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618357 Pathogen - hypothetical protein CPn0442 2 None None None 15618593 Common dppF_2 ABC ATPase Dipeptide Transport CPn0683 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15618093 Pathogen - hypothetical protein CPn0169 1 None None None 15618835 Common - Thioredoxin Disulfide Isomerase CPn0926 7 COG2143 COG2143, Thioredoxin-related protein Posttranslational modification, protein turnover, chaperones 15618495 Common - similarity to CHLPS IncA CPn0585 98 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618816 Common cutA Periplasmic Divalent Cation Tolerance Protein CPn0907 112 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 15618087 Pathogen - hypothetical protein CPn0163 1 None None None 15618104 Pathogen - hypothetical protein CPn0180 1 None None None 15618004 Common rplL 50S ribosomal protein L7/L12 CPn0080 213 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 15618079 Pathogen - hypothetical protein CPn0155 1 None None None 15618873 Common pcnB_2 Poly A Polymerase CPn0966 212 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 15618015 Common atpI V-type ATP synthase subunit I CPn0091 28 COG1269 NtpI, Archaeal/vacuolar-type H+-ATPase subunit I Energy production and conversion 15618124 Common oppC_1 Oligopeptide Permease CPn0200 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15618472 Pathogen euo CHLPS Euo Protein CPn0561 3 None None None 15618785 Common dagA_2 D-Alanine/Glycine Permease CPn0876 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 15618749 Common - hypothetical protein CPn0840 4 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15618330 Pathogen - hypothetical protein CPn0415 2 None None None 15618420 Common - predicted Metalloenzyme CPn0509 33 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 15618946 Common aroL shikimate kinase CPn1038 151 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 15618682 Common ung uracil-DNA glycosylase CPn0773 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 15618418 Pathogen - hypothetical protein CPn0507 1 None None None 15618307 Common dcd deoxycytidine triphosphate deaminase CPn0392 149 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 15618300 Common pepA leucyl aminopeptidase CPn0385 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 15618662 Pathogen - hypothetical protein CPn0753 2 None None None 15618234 Common trxB Thioredoxin Reductase CPn0314 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 15618640 Common mviN Integral Membrane Protein CPn0730 165 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 15618274 Common lepA GTP-binding protein LepA CPn0359 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 15618427 Pathogen - hypothetical protein CPn0516 1 None None None 15618772 Common pgmA phosphoglyceromutase CPn0863 155 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 15618065 Common rpiA ribose-5-phosphate isomerase A CPn0141 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 15618629 Common sfhB predicted Pseudouridine Synthase CPn0719 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 15618116 Common glnP ABC Amino Acid Transporter Permease CPn0192 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15618618 Pathogen - hypothetical protein CPn0708 2 None None None 15618310 Common - hypothetical protein CPn0395 199 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15618020 Common uvrA excinuclease ABC subunit A CPn0096 239 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 15618700 Pathogen - hypothetical protein CPn0791 3 None None None 15618385 Pathogen - hypothetical protein CPn0474 2 None None None 15618050 Pathogen - hypothetical protein CPn0126 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618828 Common ldh Leucine Dehydrogenase CPn0919 116 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 15618263 Common ytgB_1 rRNA methylase CPn0348 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 15617998 Common tuf elongation factor Tu CPn0074 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 15618170 Common rpsI 30S ribosomal protein S9 CPn0246 245 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 15618480 Common plsC Glycerol-3-P Acyltransferase CPn0569 123 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15618413 Common grpE HSP-70 Cofactor CPn0502 223 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 15618252 Pathogen - CHLTR T2 Protein CPn0332 1 None None None 15618002 Common rplA 50S ribosomal protein L1 CPn0078 248 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 15618177 Pathogen - hypothetical protein_1 CPn0255 2 None None None 15618029 Pathogen - hypothetical protein CPn0105 3 None None None 15618101 Pathogen - hypothetical protein CPn0177 1 None None None 15618616 Pathogen - hypothetical protein CPn0706 3 None None None 15618536 Common rpoA DNA-directed RNA polymerase subunit alpha CPn0626 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 15618686 Common groEL chaperonin GroEL CPn0777 237 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15618441 Common spoU_1 rRNA Methylase CPn0530 191 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 15618575 Common uhpC Hexosphosphate Transport CPn0665 156 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 15618112 Common - hypothetical protein CPn0188 14 COG1295 Rbn, Predicted membrane protein Function unknown 15618707 Common - hypothetical protein CPn0798 15 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 15618314 Pathogen - hypothetical protein CPn0399 2 None None None 15618509 Common oppA_5 Oligopeptide Binding Lipoprotein CPn0599 151 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15618756 Common clpP ATP-dependent Clp protease proteolytic subunit CPn0847 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15618165 Pathogen - hypothetical protein CPn0241 1 None None None 15618352 Common clpC ClpC Protease CPn0437 221 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 15618437 Common kpsF GutQ/KpsF Family Sugar-P Isomerase CPn0526 154 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 15618897 Common nusB transcription antitermination protein NusB CPn0989 35 COG0781 NusB, Transcription termination factor Transcription 15618655 Pathogen - hypothetical protein CPn0745 1 None None None 15618840 Common lysS lysyl-tRNA synthetase CPn0931 235 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 15618847 Pathogen - hypothetical protein CPn0938 2 None None None 15618865 Pathogen plsB Glycerol-3-P Acyltransferase CPn0958 3 None None None 15618502 Common yidD YidD family CPn0592 183 COG0759 COG0759, Uncharacterized conserved protein Function unknown 15618664 Pathogen - hypothetical protein CPn0755 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15618608 Common pyrH uridylate kinase CPn0698 239 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 15617980 Common mrsA Phosphomannomutase CPn0056 230 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 15618136 Pathogen - hypothetical protein CPn0212 1 None None None 15618463 Common rpsL 30S ribosomal protein S12 CPn0552 239 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 15618673 Common - hypothetical protein CPn0764 18 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 15618154 Pathogen - hypothetical protein CPn0230 2 None None None 15618372 Pathogen - hypothetical protein CPn0459 1 None None None 15618142 Pathogen - hypothetical protein CPn0218 1 None None None 15618741 Common lipA lipoyl synthase CPn0832 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 15618297 Common yabC_1 SAM-Dependent Methytransferase CPn0382 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 15617983 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase CPn0059 181 COG0756 Dut, dUTPase Nucleotide transport and metabolism 15618270 Pathogen - hypothetical protein CPn0355 1 None None None 15617952 Pathogen - hypothetical protein CPn0028 1 None None None 15618529 Common ndk nucleoside diphosphate kinase CPn0619 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 15618455 Common obgE GTPase ObgE CPn0544 249 COG0536 Obg, Predicted GTPase General function prediction only 15618046 Common metG methionyl-tRNA synthetase CPn0122 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15617976 Common hemC porphobilinogen deaminase CPn0052 205 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 15618875 Common glmS D-fructose-6-phosphate amidotransferase CPn0968 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 15618762 Pathogen - hypothetical protein CPn0853 2 None None None 15618009 Pathogen - hypothetical protein CPn0085 3 None None None 15618012 Common atpA V-type ATP synthase subunit A CPn0088 247 COG1155 NtpA, Archaeal/vacuolar-type H+-ATPase subunit A Energy production and conversion 15618972 Pathogen - hypothetical protein CPn1064 1 None None None 15618186 Pathogen - hypothetical protein CPn0266 1 None None None 15617992 Pathogen - hypothetical protein CPn0068 1 None None None 15617955 Pathogen rpsU 30S ribosomal protein S21 CPn0031 3 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 15618927 Pathogen - hypothetical protein CPn1019 2 None None None 15618058 Common groEL chaperonin GroEL CPn0134 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15618343 Common nqr3 Na(+)-translocating NADH-quinone reductase subunit C CPn0428 44 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 15618715 Common thrS threonyl-tRNA synthetase CPn0806 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618108 Common efp_1 elongation factor P CPn0184 213 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 15618279 Common fer4 Ferredoxin IV CPn0364 12 COG0633 Fdx, Ferredoxin Energy production and conversion 15618286 Pathogen - hypothetical protein CPn0371 1 None None None 15618522 Common polA DNA polymerase I CPn0612 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 15618602 Common - cysteine desulfurase activator complex subunit SufB CPn0692 185 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 15618208 Pathogen - hypothetical protein CPn0288 2 None None None 15618768 Pathogen - hypothetical protein CPn0859 2 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 15618466 Common tsp Tail-Specific Protease CPn0555 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 15618439 Common gltT Glutamate Symport CPn0528 154 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 15618798 Common hemN_2 coproporphyrinogen III oxidase CPn0889 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 15617946 Common maf Maf-like protein CPn0022 190 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 15618642 Common nfo endonuclease IV CPn0732 99 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 15618582 Common dacF D-Ala-D-Ala Carboxypeptidase CPn0672 143 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 15618360 Common pmp_7 Polymorphic Outer Membrane Protein G Family CPn0445 7 None None None 15618974 Pathogen secG preprotein translocase subunit SecG CPn1066 2 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 15618416 Common - 3-methyladenine DNA glycosylase CPn0505 82 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 15618457 Common rplU 50S ribosomal protein L21 CPn0546 154 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 15618517 Common glgC Glucose-1-P Adenyltransferase CPn0607 161 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 15618852 Pathogen - hypothetical protein CPn0943 2 None None None 15618359 Common pmp_6 Polymorphic Outer Membrane Protein G/I Family CPn0444 132 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 15618624 Common hemA glutamyl-tRNA reductase CPn0714 162 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 15618348 Common gcsH glycine cleavage system protein H CPn0433 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 15618882 Common sucD succinyl-CoA synthetase subunit alpha CPn0974 207 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 15618887 Common htrA DO Serine Protease CPn0979 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 15618164 Pathogen - hypothetical protein CPn0240 1 None None None 15618533 Pathogen - hypothetical protein CPn0623 3 None None None 15617937 Pathogen - hypothetical protein CPn0008 1 None None None 15618032 Pathogen - hypothetical protein CPn0108 2 None None None 15618063 Common yqgE hypothetical protein CPn0139 129 COG1678 COG1678, Putative transcriptional regulator Transcription 15618149 Common - hypothetical protein CPn0225 2 None None None 15618870 Common pmp_21 Putative Outer Membrane Protein D Family CPn0963 34 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15618392 Pathogen - hypothetical protein CPn0481 1 None None None 15618425 Common - hypothetical protein CPn0514 29 COG1427 COG1427, Predicted periplasmic solute-binding protein General function prediction only 15618782 Common ribH riboflavin synthase subunit beta CPn0873 221 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 15618598 Pathogen - hypothetical protein CPn0688 2 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 15618904 Pathogen - hypothetical protein CPn0996 3 COG0795 COG0795, Predicted permeases General function prediction only 15618605 Pathogen ompA Major Outer Membrane Protein CPn0695 2 None None None 15618611 Common karG ATP:guanido phosphotransferase CPn0701 23 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 15618151 Common dsbB putative disulfide oxidoreductase CPn0227 22 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 15618247 Common rpmB 50S ribosomal protein L28 CPn0327 79 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 15618937 Pathogen - hypothetical protein CPn1029 1 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 15618257 Common smpB SsrA-binding protein CPn0337 215 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 15618290 Pathogen - hypothetical protein CPn0375 1 None None None 15618540 Common rplO 50S ribosomal protein L15 CPn0630 206 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 15618826 Common - hydrolase/phosphatase homolog CPn0917 20 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 15618339 Common dnaA chromosomal replication initiation protein CPn0424 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15618670 Common - hypothetical protein CPn0761 34 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 15618631 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase CPn0721 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 15618369 Pathogen - hypothetical protein CPn0456 1 None None None 15618891 Common pssA Glycerol-Serine Phosphatidyltransferase CPn0983 142 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 15618944 Common aroB 3-dehydroquinate synthase CPn1036 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 15618697 Common sdhC Succinate Dehydrogenase CPn0788 14 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 15618547 Common rplN 50S ribosomal protein L14 CPn0637 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 15618195 Common gyrB DNA gyrase subunit B CPn0275 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 15618723 Pathogen - hypothetical protein CPn0814 3 None None None 15618085 Common - predicted acyltransferase family CPn0161 40 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 161353777 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase CPn0515 205 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15618680 Common rpoN RNA polymerase factor sigma-54 CPn0771 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 15618510 Pathogen - hypothetical protein CPn0600 1 None None None 15618814 Common murC/ddlA Muramate-Ala Ligase & D-Ala-D-Ala Ligase CPn0905 215 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 15618591 Common - hypothetical protein CPn0681 37 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 15618777 Common zntA Metal Transport P-type ATPase CPn0868 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 15618022 Common htrB lipid A biosynthesis lauroyl acyltransferase CPn0098 77 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 15618805 Pathogen - hypothetical protein CPn0896 2 None None None 15618770 Common - NifU-related protein CPn0861 24 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 15618955 Common dapB dihydrodipicolinate reductase CPn1047 211 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 15618099 Pathogen - hypothetical protein CPn0175 1 None None None 15618239 Common truB tRNA pseudouridine synthase B CPn0319 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 15618222 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CPn0302 154 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 15618470 Pathogen - hypothetical protein CPn0559 2 None None None 15618077 Common leuS leucyl-tRNA synthetase CPn0153 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15618398 Pathogen - hypothetical protein CPn0487 3 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 15618953 Common - conserved hypothetical bacterial membrane protein CPn1045 75 COG1738 COG1738, Uncharacterized conserved protein Function unknown