IslandPath Analysis: Bacillus cereus ATCC 14579



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.40   STD DEV: 3.53
Bacillus cereus ATCC 14579, complete genome - 1..5411809
5234 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 34.75	0	281..1621	+	446	30018279	dnaA	BC0001	-	chromosomal replication initiation protein
2	 33.42	0	1800..2945	+	381	30018280	-	BC0002	-	DNA polymerase III subunit beta
3	 33.80	0	3073..3285	+	70	30018281	-	BC0003	-	hypothetical protein
4	 33.42	0	3298..4425	+	375	30018282	recF	BC0004	-	recombination protein F
5	 37.84	0	4458..6386	+	642	30018283	gyrB	BC0005	-	DNA gyrase subunit B
6	 36.77	0	6472..8946	+	824	30018284	-	BC0006	-	DNA gyrase subunit A
7	 30.74	-1	14232..15233	-	333	30018285	-	BC0012	-	hypothetical protein
8	 38.66	0	15349..16812	+	487	30018286	-	BC0013	-	inositol-5-monophosphate dehydrogenase
9	 35.76	0	16917..18233	+	438	30018287	-	BC0014	-	D-alanyl-D-alanine carboxypeptidase
10	 43.18	+2	18388..19281	+	297	30018288	-	BC0015	-	pyridoxine biosynthesis protein
11	 41.12	+1	19300..19890	+	196	30018289	-	BC0016	-	glutamine amidotransferase subunit PdxT
12	 37.41	0	20218..21492	+	424	30018290	-	BC0017	-	seryl-tRNA synthetase
13	 35.14	0	21747..22298	+	183	30018291	-	BC0019	-	putative cytoplasmic protein
14	 34.12	0	23005..23640	-	211	30018292	-	BC0021	-	deoxyguanosine kinase
15	 28.57	-1	23766..24290	-	174	30018293	-	BC0022	-	pyrazinamidase
16	 37.72	0	24415..24915	+	166	30018294	-	BC0023	-	cytosine deaminase
17	 38.60	0	25392..27080	+	562	30018295	-	BC0024	-	DNA polymerase III subunits gamma and tau
18	 37.88	0	27103..27432	+	109	30018296	-	BC0025	-	hypothetical protein
19	 39.87	+1	27447..28043	+	198	30018297	recR	BC0026	-	recombination protein RecR
20	 34.68	0	28058..28279	+	73	30018298	-	BC0027	-	putative cytoplasmic protein
21	 31.85	-1	28441..28710	+	89	30018299	-	BC0028	-	SigmaK-factor processing regulatory protein BofA
22	 25.00	-2	34129..34308	+	59	30018300	-	BC0034	-	CsfB protein
23	 35.65	0	34380..35801	+	473	30018301	-	BC0035	-	arginine decarboxylase
24	 37.96	0	35803..36429	+	208	30018302	tdk	BC0036	-	thymidylate kinase
25	 36.69	0	36465..37448	+	327	30018303	-	BC0037	-	DNA polymerase III subunit delta'
26	 35.99	0	37454..38281	+	275	30018304	-	BC0038	-	tpl protein
27	 33.05	0	38290..38646	+	118	30018305	-	BC0039	-	DNA replication intiation control protein YabA
28	 33.74	0	38729..39469	+	246	30018306	-	BC0040	-	methyltransferase
29	 34.59	0	39715..40590	+	291	30018307	-	BC0041	-	Corrin/porphyrin methyltransferase
30	 34.74	0	40611..40895	-	94	30018308	-	BC0042	-	transcription state transcriptional regulator AbrB
31	 35.70	0	41381..43363	+	660	30018309	metG	BC0043	-	methionyl-tRNA synthetase
32	 38.04	0	43533..44297	+	254	30018310	-	BC0044	-	Sec-independent secretion protein tatD
33	 40.00	+1	44500..45069	+	189	30018311	-	BC0045	-	ribonuclease M5
34	 34.36	0	45066..45944	+	292	30018312	ksgA	BC0046	-	dimethyladenosine transferase
35	 37.04	0	46055..46918	+	287	30018313	-	BC0047	-	sporulation-specific protease YabG
36	 34.87	0	47145..47405	+	86	30018314	-	BC0048	-	VEG protein
37	 40.56	+1	47497..47676	+	59	30018315	-	BC0049	-	SspF protein
38	 37.70	0	47873..48742	+	289	30018316	-	BC0050	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
39	 37.46	0	48797..49645	+	282	30018317	-	BC0051	-	purine operon repressor
40	 36.53	0	49766..50140	+	124	30018318	-	BC0052	-	translation initiation inhibitor
41	 40.82	+1	50293..50586	+	97	30018319	-	BC0053	-	regulatory protein SpoVG
42	 38.48	0	50900..52279	+	459	30018320	-	BC0054	-	glucosamine-1-phosphate acetyltransferase
43	 37.00	0	52298..53251	+	317	30018321	-	BC0055	-	ribose-phosphate pyrophosphokinase
44	 37.28	0	53252..53884	+	210	30018322	-	BC0056	-	peptidyl-tRNA hydrolase
45	 33.33	0	53955..54179	+	74	30018323	-	BC0057	-	hypothetical protein
46	 35.54	0	54285..57815	+	1176	30018324	-	BC0058	-	transcription-repair coupling factor
47	 37.24	0	57952..58488	+	178	30018325	-	BC0059	-	stage V sporulation protein T
48	 34.96	0	58719..60320	+	533	30018326	-	BC0060	-	polysaccharides export protein
49	 36.89	0	60333..61793	+	486	30018327	-	BC0061	-	MazG protein
50	 31.16	-1	61808..62083	+	91	30018328	-	BC0062	-	heat shock protein 15
51	 33.98	0	62142..62450	+	102	30018329	-	BC0063	-	hypothetical protein
52	 32.70	0	62465..63100	+	211	30018330	-	BC0064	-	spore cortex biosynthesis protein
53	 33.06	0	63097..63456	+	119	30018331	-	BC0065	-	cell division protein DIVIC
54	 42.18	+1	63544..64029	+	161	30018332	-	BC0066	-	hypothetical protein
55	 35.91	0	64631..67078	+	815	30018333	-	BC0069	-	stage II sporulation protein E
56	 35.01	0	67309..68739	+	476	30018334	-	BC0070	-	cell cycle protein MesJ
57	 33.89	0	68736..69278	+	180	30018335	-	BC0071	-	hypoxanthine-guanine phosphoribosyltransferase
58	 39.64	+1	69364..71265	+	633	30018336	-	BC0072	-	cell division protein ftsH
59	 36.63	0	71510..72298	+	262	30018337	-	BC0073	-	pantothenate kinase
60	 39.38	+1	72305..73180	+	291	30018338	hslO	BC0074	-	Hsp33-like chaperonin
61	 39.72	+1	73294..74217	+	307	30018339	-	BC0075	-	cysteine synthase
62	 38.34	0	74440..75837	+	465	30018340	-	BC0076	-	para-aminobenzoate synthase component I
63	 38.78	0	75843..76430	+	195	30018341	-	BC0077	-	para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
64	 35.05	0	76424..77296	+	290	30018342	-	BC0078	-	4-amino-4-deoxychorismate lyase
65	 39.49	+1	77271..78131	+	286	30018343	-	BC0079	-	dihydropteroate synthase
66	 37.19	0	78132..78494	+	120	30018344	-	BC0080	-	dihydroneopterin aldolase
67	 34.69	0	78491..79006	+	171	30018345	-	BC0081	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
68	 38.73	0	78958..79161	+	67	30018346	-	BC0082	-	XRE family transcriptional regulator
69	 39.74	+1	79185..80183	+	332	30018347	-	BC0083	-	Nif3 family protein
70	 37.00	0	80343..81842	+	499	30018348	lysS	BC0084	-	lysyl-tRNA synthetase
71	 32.90	0	92915..93376	+	153	30018349	-	BC0099	-	transcriptional regulator ctsR
72	 36.59	0	93544..94095	+	183	30018350	-	BC0100	-	ClpC ATPase
73	 35.68	0	94100..95164	+	354	30018351	-	BC0101	-	ATP:guanido phosphotransferase
74	 38.59	0	95187..97622	+	811	30018352	-	BC0102	-	negative regulator of genetic competence clpC/mecB
75	 38.85	0	97718..99094	+	458	30018353	-	BC0103	-	DNA repair protein RadA
76	 36.96	0	99098..100171	+	357	30018354	-	BC0104	-	DNA integrity scanning protein DisA
77	 35.68	0	100332..101441	+	369	30018355	-	BC0105	-	hypothetical protein
78	 40.09	+1	101458..102138	+	226	30018356	ispD	BC0106	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
79	 37.74	0	102255..102731	+	158	30018357	ispF	BC0107	-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
80	 36.69	0	102788..104278	+	496	30018358	gltX	BC0108	-	glutamyl-tRNA synthetase
81	 37.09	0	104723..105388	+	221	30018359	-	BC0109	-	serine O-acetyltransferase
82	 36.05	0	105369..106766	+	465	30018360	cysS	BC0110	-	cysteinyl-tRNA synthetase
83	 38.73	0	106769..107176	+	135	30018361	-	BC0111	-	hypothetical protein
84	 37.37	0	107173..107916	+	247	30018362	-	BC0112	-	23S rRNA methyltransferase
85	 37.04	0	107920..108432	+	170	30018363	-	BC0113	-	putative cytoplasmic protein
86	 34.70	0	108500..109159	+	219	30018364	-	BC0114	-	RNA polymerase factor sigma-70
87	 38.33	0	109474..109653	+	59	30018365	secE	BC0115	-	preprotein translocase subunit SecE
88	 36.89	0	109785..110318	+	177	30018366	nusG	BC0116	-	transcription antitermination protein NusG
89	 43.43	+2	110486..110911	+	141	30018367	rplK	BC0117	-	50S ribosomal protein L11
90	 40.84	+1	111088..111780	+	230	161511215	rplA	BC0118	-	50S ribosomal protein L1
91	 41.32	+1	112014..112514	+	166	30018369	rplJ	BC0119	-	50S ribosomal protein L10
92	 39.17	+1	112582..112941	+	119	30018370	rplL	BC0120	-	50S ribosomal protein L7/L12
93	 38.17	0	113018..113617	+	199	30018371	-	BC0121	-	16S rRNA m(2)G 1207 methyltransferase
94	 41.82	+1	113908..117441	+	1177	30018372	rpoB	BC0122	-	DNA-directed RNA polymerase subunit beta
95	 40.53	+1	117479..121090	+	1203	30018373	-	BC0123	-	DNA-directed RNA polymerase subunit beta'
96	 37.88	0	121189..121452	+	87	30018374	-	BC0124	-	hypothetical protein
97	 40.43	+1	121567..121989	+	140	30018375	rpsL	BC0125	-	30S ribosomal protein S12
98	 42.68	+2	122019..122489	+	156	30018376	-	BC0126	-	30S ribosomal protein S7
99	 42.57	+2	122698..124776	+	692	30018377	-	BC0128	-	elongation factor G
100	 43.77	+2	124894..126081	+	395	30018378	tuf	BC0129	-	elongation factor Tu
35.40	MEAN

3.53	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.