IslandPath Analysis: Bacillus anthracis str. 'Ames Ancestor'



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.42   STD DEV: 3.63
Bacillus anthracis str. 'Ames Ancestor', complete genome - 1..5227419
5309 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 35.42	0	407..1747	+	446	47525255	dnaA	GBAA0001	-	chromosomal replication initiation protein
2	 32.11	0	1926..3065	+	379	47525256	dnaN-1	GBAA0002	-	DNA polymerase III subunit beta
3	 34.74	0	3193..3405	+	70	47777763	-	GBAA0003	-	hypothetical protein
4	 34.57	0	3418..4545	+	375	47525258	recF	GBAA0004	-	recombination protein F
5	 36.92	0	4584..6506	+	640	47525259	gyrB	GBAA0005	-	DNA gyrase subunit B
6	 36.53	0	6595..9066	+	823	47525260	gyrA	GBAA0006	-	DNA gyrase subunit A
7	 38.52	0	15468..16931	+	487	47525264	guaB	GBAA0008	-	inositol-5-monophosphate dehydrogenase
8	 35.09	0	17045..18352	+	435	47525265	dacA	GBAA0009	-	D-alanyl-D-alanine carboxypeptidase
9	 42.79	+2	18514..19401	+	295	47525266	-	GBAA0010	-	pyridoxine biosynthesis protein
10	 40.27	+1	19420..20010	+	196	47525267	-	GBAA0011	-	glutamine amidotransferase subunit PdxT
11	 38.27	0	20338..21612	+	424	47525268	serS	GBAA0012	-	seryl-tRNA synthetase
12	 34.78	0	21869..22420	+	183	47525269	-	GBAA0013	-	hypothetical protein
13	 35.87	0	22456..23124	-	222	47525270	-	GBAA0014	-	deoxynucleoside kinase family protein
14	 34.59	0	23127..23762	-	211	47525271	-	GBAA0015	-	deoxynucleoside kinase family protein
15	 30.56	-1	23888..24427	-	179	47525272	-	GBAA0016	-	isochorismatase family protein
16	 32.62	0	24405..24545	+	46	47777764	-	GBAA0017	-	hypothetical protein
17	 37.72	0	24535..25035	+	166	47525273	-	GBAA0018	-	cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein
18	 38.90	0	25512..27200	+	562	47525274	dnaX	GBAA0019	-	DNA polymerase III subunits gamma and tau
19	 36.97	0	27223..27552	+	109	47525275	-	GBAA0020	-	hypothetical protein
20	 40.03	+1	27567..28163	+	198	47525276	recR	GBAA0021	-	recombination protein RecR
21	 32.88	0	28178..28399	+	73	47525277	-	GBAA0022	-	hypothetical protein
22	 32.22	0	28614..28883	+	89	47525278	bofA	GBAA0024	-	sigma-k factor processing regulatory protein BofA
23	 25.56	-2	34303..34482	+	59	47525281	-	GBAA0025	-	hypothetical protein
24	 35.09	0	34554..35975	+	473	47525282	cad-1	GBAA0026	-	lysine decarboxylase
25	 36.04	0	35977..36603	+	208	47525283	tdk	GBAA0027	-	thymidylate kinase
26	 36.99	0	36639..37622	+	327	47777765	holB	GBAA0028	-	DNA polymerase III subunit delta'
27	 36.44	0	37619..38455	+	278	47525285	-	GBAA0029	-	hypothetical protein
28	 32.19	0	38470..38820	+	116	47777766	-	GBAA0030	-	DNA replication intiation control protein YabA
29	 34.41	0	38941..39681	+	246	47525287	-	GBAA0031	-	hypothetical protein
30	 34.02	0	39668..39958	+	96	47525288	-	GBAA0032	-	GIY-YIG nuclease superfamily protein
31	 34.82	0	39927..40802	+	291	47525289	-	GBAA0033	-	hypothetical protein
32	 33.68	0	40823..41107	-	94	47525290	abrB	GBAA0034	-	transition state transcriptional regulatory protein AbrB
33	 36.01	0	41598..43580	+	660	47777767	metG	GBAA0036	-	methionyl-tRNA synthetase
34	 37.50	0	43746..44513	+	255	47525292	-	GBAA0037	-	TatD family deoxyribonuclease
35	 37.63	0	44728..45285	+	185	47525293	-	GBAA0038	-	primase-related protein
36	 36.06	0	45282..46160	+	292	47525294	ksgA	GBAA0039	-	dimethyladenosine transferase
37	 37.50	0	46271..47134	+	287	47525295	-	GBAA0040	-	yabG protein
38	 36.78	0	47373..47633	+	86	47525296	-	GBAA0041	-	veg protein
39	 39.44	+1	47725..47904	+	59	50196906	sspF	GBAA0042	-	small, acid-soluble spore protein
40	 38.28	0	48101..48970	+	289	47777768	ispE	GBAA0043	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
41	 36.98	0	49025..49873	+	282	47525299	purR	GBAA0044	-	purine operon repressor
42	 22.50	-2	49860..49979	+	39	47777769	-	GBAA0045	-	hypothetical protein
43	 35.47	0	49996..50370	+	124	47525300	-	GBAA0046	-	endoribonuclease L-PSP, putative
44	 40.82	+1	50523..50816	+	97	47777770	spoVG	GBAA0047	-	regulatory protein SpoVG
45	 38.33	0	51139..52518	+	459	47525302	gcaD	GBAA0048	-	UDP-N-acetylglucosamine pyrophosphorylase
46	 37.21	0	52537..53490	+	317	47525303	prs	GBAA0049	-	ribose-phosphate pyrophosphokinase
47	 34.40	0	53563..54123	+	186	47525304	spoVC	GBAA0050	-	peptidyl-tRNA hydrolase
48	 32.89	0	54194..54418	+	74	47525305	-	GBAA0051	-	hypothetical protein
49	 35.74	0	54524..58054	+	1176	47525306	mfd	GBAA0052	-	transcription-repair coupling factor
50	 36.31	0	58190..58726	+	178	47525307	spoVT	GBAA0053	-	stage V sporulation protein T
51	 34.83	0	58957..60558	+	533	47525308	-	GBAA0054	-	stage V sporulation protein B, putative
52	 37.30	0	60571..62031	+	486	47777771	-	GBAA0055	-	tetrapyrrole methylase family protein/MazG family protein
53	 32.61	0	62046..62321	+	91	47525310	-	GBAA0056	-	s4 domain-containing protein
54	 33.66	0	62380..62688	+	102	47777772	-	GBAA0057	-	yabP protein
55	 32.42	0	62685..63338	+	217	47525312	-	GBAA0058	-	hypothetical protein
56	 33.61	0	63335..63694	+	119	47525313	divIC-1	GBAA0059	-	cell division protein DivIC
57	 42.44	+1	63782..64264	+	160	47525314	-	GBAA0060	-	hypothetical protein
58	 36.91	0	64936..67314	+	792	47525315	spoIIE	GBAA0061	-	stage II sporulation protein E
59	 36.48	0	67548..68978	+	476	47525316	-	GBAA0062	-	hypothetical protein
60	 34.81	0	68975..69517	+	180	47525317	hpt-1	GBAA0063	-	hypoxanthine-guanine phosphoribosyltransferase
61	 40.12	+1	69603..71504	+	633	47525318	ftsH	GBAA0064	-	cell division protein FtsH
62	 38.28	0	71729..72517	+	262	47777773	-	GBAA0065	-	pantothenate kinase
63	 39.84	+1	72524..73399	+	291	47525320	hslO	GBAA0066	-	Hsp33-like chaperonin
64	 39.83	+1	73504..74427	+	307	47525321	cysK-1	GBAA0067	-	cysteine synthase A
65	 38.20	0	74648..76045	+	465	47525322	pabB	GBAA0068	-	para-aminobenzoate synthase component I
66	 39.63	+1	76051..76638	+	195	47525323	pabA-1	GBAA0069	-	para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
67	 35.05	0	76632..77504	+	290	47525324	pabC	GBAA0070	-	4-amino-4-deoxychorismate lyase
68	 39.15	+1	77497..78339	+	280	47525325	folP	GBAA0071	-	dihydropteroate synthase
69	 36.64	0	78340..78702	+	120	47777774	folB	GBAA0072	-	dihydroneopterin aldolase
70	 34.11	0	78699..79214	+	171	47525327	folK	GBAA0073	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
71	 39.22	+1	79166..79369	+	67	47525328	-	GBAA0074	-	DNA-binding protein
72	 39.38	+1	79417..80391	+	324	47525329	-	GBAA0075	-	NifR3 family TIM-barrel protein
73	 36.73	0	80551..82050	+	499	47525330	lysS	GBAA0076	-	lysyl-tRNA synthetase
74	 33.33	0	87415..87876	+	153	47525333	ctsR	GBAA0077	-	transcriptional regulator CtsR
75	 35.34	0	88050..88598	+	182	47525334	-	GBAA0078	-	hypothetical protein
76	 34.65	0	88603..89667	+	354	47525335	-	GBAA0079	-	ATP:guanido phosphotransferase
77	 39.12	+1	89690..92125	+	811	47525336	-	GBAA0080	-	negative regulator of genetic competence ClpC/MecB
78	 39.51	+1	92222..93598	+	458	47525337	radA	GBAA0081	-	DNA repair protein RadA
79	 37.34	0	93602..94675	+	357	47525338	-	GBAA0082	-	DNA integrity scanning protein DisA
80	 35.05	0	94836..95945	+	369	47525339	-	GBAA0083	-	hypothetical protein
81	 39.35	+1	95962..96642	+	226	47525340	ispD	GBAA0084	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
82	 37.95	0	96757..97233	+	158	47525341	ispF	GBAA0085	-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
83	 37.11	0	97323..98780	+	485	47525342	gltX	GBAA0086	-	glutamyl-tRNA synthetase
84	 37.39	0	99213..99878	+	221	47525343	cysE	GBAA0088	-	serine O-acetyltransferase
85	 36.77	0	99859..101256	+	465	47525344	cysS	GBAA0089	-	cysteinyl-tRNA synthetase
86	 38.24	0	101259..101666	+	135	47525345	-	GBAA0090	-	hypothetical protein
87	 37.50	0	101663..102406	+	247	47525346	-	GBAA0091	-	RNA methyltransferase
88	 37.62	0	102410..102922	+	170	47525347	-	GBAA0092	-	hypothetical protein
89	 35.92	0	102990..103646	+	218	47525348	sigH	GBAA0093	-	RNA polymerase factor sigma-70
90	 33.33	0	103778..103924	+	48	47777775	rpmG	GBAA0094	-	50S ribosomal protein L33
91	 37.78	0	103957..104136	+	59	47525349	secE	GBAA0095	-	preprotein translocase subunit SecE
92	 37.27	0	104268..104801	+	177	50196907	nusG	GBAA0096	-	transcription antitermination protein NusG
93	 42.96	+2	104969..105394	+	141	47777776	rplK	GBAA0097	-	50S ribosomal protein L11
94	 40.84	+1	105572..106264	+	230	47525352	rplA	GBAA0098	-	50S ribosomal protein L1
95	 41.12	+1	106497..106997	+	166	47525354	rplJ	GBAA0099	-	50S ribosomal protein L10
96	 39.17	+1	107065..107424	+	119	47525355	rplL	GBAA0100	-	50S ribosomal protein L7/L12
97	 38.50	0	107499..108098	+	199	47525356	-	GBAA0101	-	methyltransferase
98	 41.74	+1	108391..111924	+	1177	50196908	rpoB	GBAA0102	-	DNA-directed RNA polymerase subunit beta
99	 40.61	+1	111989..115573	+	1194	47525359	rpoC	GBAA0103	-	DNA-directed RNA polymerase subunit beta'
100	 36.55	0	115687..115935	+	82	47777777	-	GBAA0104	-	hypothetical protein
35.42	MEAN

3.63	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.