IslandPath Analysis: Bacillus anthracis str. Sterne



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.52   STD DEV: 3.39
Bacillus anthracis str. Sterne, complete genome - 1..5228663
5287 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 35.42	0	408..1748	+	446	49183040	dnaA	BAS0001	-	chromosomal replication initiation protein
2	 32.11	-1	1927..3066	+	379	49183041	-	BAS0002	-	DNA polymerase III subunit beta
3	 34.74	0	3194..3406	+	70	49183042	-	BAS0003	-	hypothetical protein
4	 34.57	0	3419..4546	+	375	49183043	recF	BAS0004	-	recombination protein F
5	 36.92	0	4585..6507	+	640	49183044	gyrB	BAS0005	-	DNA gyrase subunit B
6	 36.53	0	6596..9067	+	823	49183045	-	BAS0006	-	DNA gyrase subunit A
7	 33.86	0	14354..15298	-	314	49183046	-	BAS0009	-	hypothetical protein
8	 38.52	0	15469..16932	+	487	49183047	-	BAS0011	-	inositol-5-monophosphate dehydrogenase
9	 35.23	0	17037..18353	+	438	49183048	-	BAS0012	-	D-alanyl-D-alanine carboxypeptidase
10	 42.79	+2	18515..19402	+	295	49183049	-	BAS0013	-	pyridoxine biosynthesis protein
11	 40.27	+1	19421..20011	+	196	49183050	-	BAS0014	-	glutamine amidotransferase subunit PdxT
12	 38.27	0	20339..21613	+	424	49183051	-	BAS0015	-	seryl-tRNA synthetase
13	 34.78	0	21870..22421	+	183	49183052	-	BAS0016	-	hypothetical protein
14	 35.87	0	22457..23125	-	222	49183053	-	BAS0017	-	deoxynucleoside kinase family protein
15	 34.59	0	23128..23763	-	211	49183054	-	BAS0018	-	deoxynucleoside kinase family protein
16	 30.56	-1	23889..24428	-	179	49183055	-	BAS0019	-	isochorismatase family protein
17	 37.72	0	24536..25036	+	166	49183056	-	BAS0020	-	cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein
18	 38.90	0	25513..27201	+	562	49183057	-	BAS0021	-	DNA polymerase III subunits gamma and tau
19	 36.97	0	27224..27553	+	109	49183058	-	BAS0022	-	hypothetical protein
20	 40.03	+1	27568..28164	+	198	49183059	recR	BAS0023	-	recombination protein RecR
21	 32.88	0	28179..28400	+	73	49183060	-	BAS0024	-	hypothetical protein
22	 32.22	0	28615..28884	+	89	49183061	-	BAS0025	-	sigma-k factor processing regulatory protein BofA
23	 25.56	-2	34304..34483	+	59	49183062	-	BAS0027	-	csfB protein, putative
24	 35.09	0	34555..35976	+	473	49183063	-	BAS0028	-	lysine decarboxylase
25	 36.04	0	35978..36604	+	208	49183064	tdk	BAS0029	-	thymidylate kinase
26	 36.99	0	36640..37623	+	327	49183065	-	BAS0030	-	DNA polymerase III subunit delta'
27	 36.44	0	37620..38456	+	278	49183066	-	BAS0031	-	hypothetical protein
28	 33.06	0	38456..38821	+	121	49183067	-	BAS0032	-	DNA replication intiation control protein YabA
29	 34.41	0	38942..39682	+	246	49183068	-	BAS0033	-	hypothetical protein
30	 34.02	0	39669..39959	+	96	49183069	-	BAS0034	-	GIY-YIG nuclease superfamily protein
31	 34.82	0	39928..40803	+	291	49183070	-	BAS0035	-	hypothetical protein
32	 33.68	0	40824..41108	-	94	49183071	-	BAS0036	-	transition state transcriptional regulatory protein AbrB
33	 36.01	0	41599..43581	+	660	49183072	metG	BAS0037	-	methionyl-tRNA synthetase
34	 37.50	0	43747..44514	+	255	49183073	-	BAS0038	-	TatD family deoxyribonuclease
35	 37.63	0	44729..45286	+	185	49183074	-	BAS0039	-	primase-related protein
36	 36.06	0	45283..46161	+	292	49183075	ksgA	BAS0040	-	dimethyladenosine transferase
37	 37.50	0	46272..47135	+	287	49183076	-	BAS0041	-	yabG protein
38	 36.78	0	47374..47634	+	86	49183077	-	BAS0042	-	veg protein
39	 39.44	+1	47726..47905	+	59	49183078	-	BAS0043	-	small, acid-soluble spore protein
40	 38.23	0	48093..48971	+	292	49183079	-	BAS0044	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
41	 36.98	0	49026..49874	+	282	49183080	-	BAS0045	-	purine operon repressor
42	 35.47	0	49997..50371	+	124	49183081	-	BAS0046	-	endoribonuclease L-PSP, putative
43	 40.82	+1	50524..50817	+	97	161611187	-	BAS0047	-	regulatory protein SpoVG
44	 38.33	0	51140..52519	+	459	49183083	-	BAS0048	-	UDP-N-acetylglucosamine pyrophosphorylase
45	 37.21	0	52538..53491	+	317	49183084	-	BAS0049	-	ribose-phosphate pyrophosphokinase
46	 34.40	0	53564..54124	+	186	49183085	-	BAS0050	-	peptidyl-tRNA hydrolase
47	 32.89	0	54195..54419	+	74	49183086	-	BAS0051	-	hypothetical protein
48	 35.74	0	54525..58055	+	1176	49183087	-	BAS0052	-	transcription-repair coupling factor
49	 36.31	0	58191..58727	+	178	49183088	-	BAS0053	-	stage V sporulation protein T
50	 34.83	0	58958..60559	+	533	49183089	-	BAS0054	-	stage V sporulation protein B, putative
51	 37.30	0	60572..62032	+	486	49183090	-	BAS0055	-	tetrapyrrole methylase family protein/MazG family protein
52	 32.61	0	62047..62322	+	91	49183091	-	BAS0056	-	S4 domain-containing protein
53	 34.25	0	62363..62689	+	108	49183092	-	BAS0057	-	yabP protein
54	 32.42	0	62686..63339	+	217	49183093	-	BAS0058	-	hypothetical protein
55	 33.61	0	63336..63695	+	119	49183094	-	BAS0059	-	cell division protein DivIC
56	 42.44	+2	63783..64265	+	160	49183095	-	BAS0060	-	hypothetical protein
57	 37.08	0	64889..67315	+	808	49183096	-	BAS0061	-	stage II sporulation protein E
58	 36.48	0	67549..68979	+	476	49183097	-	BAS0062	-	hypothetical protein
59	 34.81	0	68976..69518	+	180	49183098	-	BAS0063	-	hypoxanthine-guanine phosphoribosyltransferase
60	 40.12	+1	69604..71505	+	633	49183099	-	BAS0064	-	cell division protein FtsH
61	 38.28	0	71730..72518	+	262	49183100	-	BAS0065	-	pantothenate kinase
62	 39.84	+1	72525..73400	+	291	49183101	hslO	BAS0066	-	Hsp33-like chaperonin
63	 39.94	+1	73505..74428	+	307	49183102	-	BAS0067	-	cysteine synthase A
64	 38.20	0	74649..76046	+	465	49183103	-	BAS0068	-	para-aminobenzoate synthase component I
65	 39.63	+1	76052..76639	+	195	49183104	-	BAS0069	-	para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
66	 35.05	0	76633..77505	+	290	49183105	-	BAS0070	-	4-amino-4-deoxychorismate lyase
67	 39.15	+1	77498..78340	+	280	49183106	-	BAS0071	-	dihydropteroate synthase
68	 36.64	0	78341..78703	+	120	49183107	-	BAS0072	-	dihydroneopterin aldolase
69	 34.11	0	78700..79215	+	171	49183108	-	BAS0073	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
70	 39.22	+1	79167..79370	+	67	49183109	-	BAS0074	-	DNA-binding protein
71	 39.38	+1	79418..80392	+	324	49183110	-	BAS0075	-	NifR3 family TIM-barrel protein
72	 36.73	0	80552..82051	+	499	49183111	lysS	BAS0076	-	lysyl-tRNA synthetase
73	 33.33	0	87416..87877	+	153	49183112	-	BAS0078	-	transcriptional regulator CtsR
74	 35.34	0	88051..88599	+	182	49183113	-	BAS0079	-	hypothetical protein
75	 34.65	0	88604..89668	+	354	49183114	-	BAS0080	-	ATP:guanido phosphotransferase
76	 39.12	+1	89691..92126	+	811	49183115	-	BAS0081	-	negative regulator of genetic competence ClpC/MecB
77	 39.51	+1	92223..93599	+	458	49183116	-	BAS0082	-	DNA repair protein RadA
78	 37.34	0	93603..94676	+	357	49183117	-	BAS0083	-	DNA integrity scanning protein DisA
79	 35.05	0	94837..95946	+	369	49183118	-	BAS0084	-	hypothetical protein
80	 39.35	+1	95963..96643	+	226	49183119	ispD	BAS0085	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
81	 37.95	0	96758..97234	+	158	49183120	ispF	BAS0086	-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
82	 37.11	0	97324..98781	+	485	49183121	gltX	BAS0087	-	glutamyl-tRNA synthetase
83	 37.39	0	99214..99879	+	221	49183122	-	BAS0088	-	serine O-acetyltransferase
84	 36.77	0	99860..101257	+	465	49183123	cysS	BAS0089	-	cysteinyl-tRNA synthetase
85	 38.24	0	101260..101667	+	135	49183124	-	BAS0090	-	hypothetical protein
86	 37.50	0	101664..102407	+	247	49183125	-	BAS0091	-	RNA methyltransferase
87	 37.62	0	102411..102923	+	170	49183126	-	BAS0092	-	hypothetical protein
88	 35.92	0	102991..103647	+	218	49183127	-	BAS0093	-	RNA polymerase factor sigma-70
89	 33.33	0	103779..103925	+	48	49183128	rpmG	BAS0094	-	50S ribosomal protein L33
90	 37.78	0	103958..104137	+	59	49183129	secE	BAS0095	-	preprotein translocase subunit SecE
91	 37.27	0	104269..104802	+	177	49183130	nusG	BAS0096	-	transcription antitermination protein NusG
92	 42.96	+2	104970..105395	+	141	49183131	rplK	BAS0097	-	50S ribosomal protein L11
93	 40.84	+1	105573..106265	+	230	49183132	rplA	BAS0098	-	50S ribosomal protein L1
94	 41.12	+1	106498..106998	+	166	49183133	rplJ	BAS0099	-	50S ribosomal protein L10
95	 39.17	+1	107066..107425	+	119	49183134	rplL	BAS0100	-	50S ribosomal protein L7/L12
96	 38.50	0	107500..108099	+	199	49183135	-	BAS0101	-	ybxB protein
97	 41.74	+1	108392..111925	+	1177	49183136	rpoB	BAS0102	-	DNA-directed RNA polymerase subunit beta
98	 40.45	+1	111963..115574	+	1203	49183137	-	BAS0103	-	DNA-directed RNA polymerase subunit beta'
99	 36.88	0	115655..115936	+	93	49183138	-	BAS0104	-	hypothetical protein
100	 40.43	+1	116051..116473	+	140	49183139	rpsL	BAS0105	-	30S ribosomal protein S12
35.52	MEAN

3.39	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.