IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.60 STD DEV: 3.72
Streptococcus pyogenes MGAS315, complete genome - 0..1900521
1865 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 33.26 -1      232..1587     	 +	451	dnaA	SpyM3_0001	-	-	
2	 33.42 -1     1742..2878     	 +	378	dnaN	SpyM3_0002	-	-	
3	 32.32 -1     2953..3150     	 +	65	-	SpyM3_0003	-	-	
4	 37.28        3480..4595     	 +	371	-	SpyM3_0004	-	-	
5	 31.75 -1     4665..5234     	 +	189	pth	SpyM3_0005	-	-	
6	 35.41        5321..8740     	 +	1139	trcF	SpyM3_0006	-	-	
7	 30.77 -2     8902..9174     	 +	90	-	SpyM3_0007	-	-	
8	 26.34 -2     9161..9532     	 +	123	divIC	SpyM3_0008	-	-	
9	 31.55 -1     9667..10953    	 +	428	-	SpyM3_0009	-	-	
10	 28.62 -2    11049..12236    	 +	395	mesJ	SpyM3_0010	-	-	
11	 30.76 -2    12241..12783    	 +	180	hpt	SpyM3_0011	-	-	
12	 37.63       12805..14784    	 +	659	ftsH	SpyM3_0012	-	-	
13	 32.97 -1    15110..16501    	 +	463	-	SpyM3_0013	-	-	
14	 40.69       31195..32391    	 +	398	-	SpyM3_0014	-	-	
15	 38.94       32644..33606    	 +	320	prsA	SpyM3_0015	-	-	
16	 31.20 -1    33891..34547    	 +	218	-	SpyM3_0016	-	-	
17	 38.10       34650..35657    	 +	335	plsX	SpyM3_0017	-	-	
18	 30.86 -2    35650..35892    	 +	80	acpP.1	SpyM3_0018	-	-	
19	 36.03       36044..36748    	 +	234	purC	SpyM3_0019	-	-	
20	 44.98 +1    36942..40598    	 +	1218	purL	SpyM3_0020	-	-	
21	 38.76       40832..42286    	 +	484	purF	SpyM3_0021	-	-	
22	 42.82 +1    42314..43336    	 +	340	purM	SpyM3_0022	-	-	
23	 47.03 +2    43504..44058    	 +	184	purN	SpyM3_0023	-	-	
24	 47.16 +2    44242..45789    	 +	515	purH	SpyM3_0024	-	-	
25	 39.29       45848..46972    	 -	374	-	SpyM3_0025	-	-	
26	 48.78 +2    47218..48492    	 +	424	purD	SpyM3_0026	-	-	
27	 48.69 +2    48650..49261    	 +	203	purE	SpyM3_0027	-	-	
28	 50.29 +2    49302..50321    	 +	339	purK	SpyM3_0028	-	-	
29	 28.71 -2    50342..51682    	 +	446	-	SpyM3_0029	-	-	
30	 44.86 +1    52051..53343    	 +	430	purB	SpyM3_0030	-	-	
31	 29.61 -2    53474..54385    	 +	303	-	SpyM3_0031	-	-	
32	 39.64       54605..55603    	 +	332	ruvB	SpyM3_0032	-	-	
33	 35.62       55741..56178    	 +	145	-	SpyM3_0033	-	-	
34	 35.07       56201..56602    	 +	133	-	SpyM3_0034	-	-	
35	 36.71       56599..58374    	 +	591	-	SpyM3_0035	-	-	
36	 40.33       58683..61325    	 +	880	adh2	SpyM3_0036	-	-	
37	 42.38 +1    61578..62594    	 +	338	adh1	SpyM3_0037	-	-	
38	 41.63       62982..64271    	 +	429	-	SpyM3_0038	-	-	
39	 40.13       64470..64778    	 +	102	rpsJ	SpyM3_0039	-	-	
40	 41.95       65026..65652    	 +	208	rplC	SpyM3_0040	-	-	
41	 42.15       65676..66299    	 +	207	rplD	SpyM3_0041	-	-	
42	 37.37       66299..66595    	 +	98	rplW	SpyM3_0042	-	-	
43	 43.65 +1    66613..67446    	 +	277	rplB	SpyM3_0043	-	-	
44	 40.50       67585..67863    	 +	92	rpsS	SpyM3_0044	-	-	
45	 39.71       67879..68223    	 +	114	rplV	SpyM3_0045	-	-	
46	 41.47       68263..68889    	 +	208	rpsC	SpyM3_0046	-	-	
47	 43.24 +1    68893..69306    	 +	137	rplP	SpyM3_0047	-	-	
48	 34.78 -1    69316..69522    	 +	68	rpmC	SpyM3_0048	-	-	
49	 38.31       69548..69808    	 +	86	rpsQ	SpyM3_0049	-	-	
50	 44.17 +1    69833..70201    	 +	122	rplN	SpyM3_0050	-	-	
51	 36.60       70280..70585    	 +	101	rplX	SpyM3_0051	-	-	
52	 40.52       70609..71151    	 +	180	rplE	SpyM3_0052	-	-	
53	 39.25       71167..71352    	 +	61	rpsN.1	SpyM3_0053	-	-	
54	 36.84       71503..71901    	 +	132	rpsH	SpyM3_0054	-	-	
55	 38.92       72104..72640    	 +	178	rplF	SpyM3_0055	-	-	
56	 45.94 +1    72745..73101    	 +	118	rplR	SpyM3_0056	-	-	
57	 42.42 +1    73120..73614    	 +	164	rpsE	SpyM3_0057	-	-	
58	 37.16       73629..73811    	 +	60	rpmD	SpyM3_0058	-	-	
59	 39.68       74027..74467    	 +	146	rplO	SpyM3_0059	-	-	
60	 36.48       74484..75788    	 +	434	secY	SpyM3_0060	-	-	
61	 39.44       75938..76576    	 +	212	adk	SpyM3_0061	-	-	
62	 36.99       76694..76912    	 +	72	infA	SpyM3_0062	-	-	
63	 37.61       76938..77054    	 +	38	rpmJ	SpyM3_0063	-	-	
64	 39.34       77072..77437    	 +	121	rpsM	SpyM3_0064	-	-	
65	 43.98 +1    77482..77838    	 +	118	rpsK	SpyM3_0065	-	-	
66	 37.91       77884..78822    	 +	312	rpoA	SpyM3_0066	-	-	
67	 40.57       78837..79223    	 +	128	rplQ	SpyM3_0067	-	-	
68	 42.47 +1    86467..86652    	 +	61	-	SpyM3_0068	-	-	
69	 33.78 -1    87975..88418    	 +	147	adcR	SpyM3_0069	-	-	
70	 40.83       88422..89141    	 +	239	adcC	SpyM3_0070	-	-	
71	 38.60       89134..89949    	 +	271	adcB	SpyM3_0071	-	-	
72	 40.62       89989..90372    	 -	127	-	SpyM3_0072	-	-	
73	 41.61       90428..91684    	 -	418	tyrS	SpyM3_0073	-	-	
74	 40.37       91788..94088    	 +	766	pbp1B	SpyM3_0074	-	-	
75	 43.06 +1    94352..97918    	 +	1188	rpoB	SpyM3_0075	-	-	
76	 44.07 +1    98009..101632   	 +	1207	rpoC	SpyM3_0076	-	-	
77	 35.92      101802..102149   	 +	115	-	SpyM3_0077	-	-	
78	 37.59      102242..103180   	 +	312	comYA	SpyM3_0078	-	-	
79	 35.27      103116..104150   	 +	344	comYB	SpyM3_0079	-	-	
80	 34.25 -1   104152..104478   	 +	108	comYC	SpyM3_0080	-	-	
81	 33.56 -1   104438..104881   	 +	147	-	SpyM3_0081	-	-	
82	 38.25      104838..105122   	 +	94	-	SpyM3_0082	-	-	
83	 35.40      105115..105549   	 +	144	comYD	SpyM3_0083	-	-	
84	 35.47      105533..105859   	 +	108	-	SpyM3_0084	-	-	
85	 38.16      105957..106910   	 +	317	-	SpyM3_0085	-	-	
86	 39.10      106969..108165   	 +	398	ackA	SpyM3_0086	-	-	
87	 35.92      108351..108659   	 +	102	-	SpyM3_0087	-	-	
88	 43.58 +1   108742..109512   	 -	256	proC	SpyM3_0088	-	-	
89	 45.51 +1   109560..110627   	 -	355	pepA	SpyM3_0089	-	-	
90	 36.84      111092..111376   	 +	94	-	SpyM3_0090	-	-	
91	 34.91      111373..111690   	 +	105	trx.1	SpyM3_0091	-	-	
92	 42.58 +1   111708..112334   	 +	208	-	SpyM3_0092	-	-	
93	 38.13      112486..112881   	 +	131	ssb.1	SpyM3_0093	-	-	
94	 39.88      113141..113782   	 -	213	-	SpyM3_0094	-	-	
95	 45.81 +1   113802..114779   	 -	325	-	SpyM3_0095	-	-	
96	 41.92      114766..115638   	 -	290	-	SpyM3_0096	-	-	
97	 31.97 -1   115764..117299   	 -	511	nra	SpyM3_0097	-	-	
98	 35.03      117729..119963   	 +	744	cbp	SpyM3_0098	-	-	
99	 38.12      119960..120481   	 +	173	-	SpyM3_0099	-	-	
100	 33.82 -1   120502..121536   	 +	344	-	SpyM3_0100	-	-	

 
 38.60 MEAN 
 
 3.72  STD DEV 



Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.