IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 0..2820462
2632 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 32.75         517..1878     	 +	453	21281730	dnaA	-	-	chromosomal replication initiator protein	
2	 32.72        2156..3289     	 +	377	21281731	dnaN	-	-	DNA polymerase III beta chain	
3	 35.37        3670..3915     	 +	81	21281732	MW0003	-	-	conserved hypothetical protein	
4	 33.78        3912..5024     	 +	370	21281733	recF	-	-	DNA repair and genetic recombination protein	
5	 36.95 +1     5034..6968     	 +	644	21281734	gyrB	-	-	DNA gyrase subunit B	
6	 36.90 +1     7005..9668     	 +	887	21281735	gyrA	-	-	DNA gyrase subunit A	
7	 37.02 +1     9755..10567    	 -	270	21281736	MW0007	-	-	conserved hypothetical protein	
8	 36.77 +1    10893..12407    	 +	504	21281737	hutH	-	-	histidine ammonia-lyase	
9	 34.50       12786..14072    	 +	428	21281738	serS	-	-	seryl-tRNA synthetase	
10	 37.36 +1    14724..15419    	 +	231	21281739	MW0010	-	-	conserved hypothetical protein	
11	 34.55       15416..15745    	 +	109	21281740	MW0011	-	-	Conserved hypothetical protein	
12	 35.81       16108..17076    	 +	322	21281741	MW0012	-	-	ORFID:MW0012~hypothetical protein, similar to homoserine-o-acetyltransferase	
13	 32.79       17384..18307    	 +	307	21281742	MW0013	-	-	conserved hypothetical protein	
14	 35.52       18322..20289    	 +	655	21281743	MW0014	-	-	conserved hypothetical protein	
15	 31.77       20286..20732    	 +	148	21281744	rplI	-	-	50S ribosomal protein L9	
16	 38.33 +1    20764..22164    	 +	466	21281745	dnaC	-	-	replicative DNA helicase	
17	 36.45 +1    22443..23726    	 +	427	21281746	purA	-	-	adenylosuccinate synthase	
18	 36.47 +1    24930..25631    	 +	233	21281747	vicR	-	-	response regulator	
19	 34.81       25644..27470    	 +	608	21281748	vicK	-	-	two-component sensor histidine kinase	
20	 35.13       27463..28797    	 +	444	21281749	MW0020	-	-	conserved hypothetical protein	
21	 32.19       28798..29586    	 +	262	21281750	MW0021	-	-	conserved hypothetical protein	
22	 35.96       29975..30775    	 +	266	21281751	MW0022	-	-	conserved hypothetical protein	
23	 38.42 +1    31003..33321    	 +	772	21281752	MW0023	-	-	ORFID:MW0023~hypothetical protein, similar to 5'-nucleotidase	
24	 39.17 +1    33689..34168    	 +	159	21281753	orfX	-	-	conserved hypothetical protein orfX	
25	 28.48 -1    34490..35746    	 +	418	21281754	MW0025	-	-	hypothetical protein	
26	 24.58 -2    36161..36400    	 +	79	21281755	MW0026	-	-	hypothetical protein	
27	 34.22       36432..37106    	 -	224	21281756	MW0027	-	-	transposase for IS-like element	
28	 29.17 -1    37364..37531    	 +	55	21281757	MW0028	-	-	probable HMG-CoA synthase	
29	 33.47       38288..39031    	 +	247	21281758	MW0029	-	-	ORFID:MW0029~glycerophosphoryldiester phosphodiesterase homologue	
30	 29.14 -1    39128..39556    	 +	142	21281759	MW0030	-	-	conserved hypothetical protein	
31	 30.59       39602..41608    	 -	668	21281760	mecA	-	-	penicillin binding protein 2 prime	
32	 29.28 -1    41708..42694    	 +	328	21281761	MW0032	-	-	truncated methicillin resistance protein MecR1	
33	 36.36 +1    42597..42926    	 +	109	21281762	truncated hsdR	-	-	ORFID:MW0033~truncated hypothetical protein, similar to type I restriction-modification system endonuclease	
34	 28.28 -1    42917..44440    	 -	507	21281763	MW0034	-	-	ORFID:MW0034~hypothetical protein, similar to transposase	
35	 37.08 +1    44576..45082    	 -	168	21281764	MW0035	-	-	hypothetical protein	
36	 32.05       45097..45408    	 -	103	21281765	MW0036	-	-	hypothetical protein	
37	 36.47 +1    45495..45845    	 -	116	21281766	MW0037	-	-	hypothetical protein	
38	 34.75       46367..47995    	 -	542	21281767	ccrB	-	-	cassette chromosome recombinase B	
39	 34.67       48017..49366    	 -	449	21281768	ccrA	-	-	cassette chromosome recombinase A	
40	 34.51       49600..51387    	 -	595	21281769	MW0040	-	-	hypothetical protein	
41	 33.68       51387..51677    	 -	96	21281770	MW0041	-	-	hypothetical protein	
42	 24.86 -2    51816..52865    	 +	349	21281771	MW0042	-	-	hypothetical protein	
43	 28.50 -1    53483..54973    	 +	496	21281772	MW0043	-	-	hypothetical protein	
44	 33.97       55346..55660    	 -	104	21281773	MW0044	-	-	truncated hypothetical protein	
45	 33.73       55597..56601    	 -	334	21281774	MW0045	-	-	hypothetical protein	
46	 25.54 -2    56854..57225    	 +	123	21281775	MW0046	-	-	truncated hypothetical protein	
47	 30.11       57354..57974    	 +	206	21281776	MW0047	-	-	hypothetical protein	
48	 27.68 -1    58513..59769    	 +	418	21281777	MW0048	-	-	hypothetical protein	
49	 29.52       60241..60870    	 -	209	21281778	MW0049	-	-	truncated transposase	
50	 35.14       61038..61148    	 -	36	21281779	MW0050	-	-	truncated transposase	
51	 26.03 -2    61524..62249    	 +	241	21281780	MW0051	-	-	enterotoxin H	
52	 23.81 -2    62816..63004    	 +	62	21281781	MW0052	-	-	ORFID:MW0052~truncated hypothetical protein, similar to enterotoxin SEO	
53	 28.06 -1    63145..63618    	 +	157	21281782	MW0053	-	-	conserved hypothetical protein	
54	 31.48       64169..64924    	 -	251	21281783	MW0054	-	-	conserved hypothetical protein	
55	 31.03       64924..65184    	 -	86	21281784	MW0055	-	-	conserved hypothetical protein	
56	 31.84       65321..66388    	 +	355	21281785	MW0056	-	-	conserved hypothetical protein	
57	 33.56       66419..67753    	 +	444	21281786	MW0057	-	-	conserved hypothetical protein	
58	 32.58       67772..68965    	 +	397	21281787	MW0058	-	-	ORFID:MW0058~hypothetical protein, similar to homo sapiens CGI-44 protein, PRO1975 protein	
59	 38.91 +1    69632..70618    	 -	328	21281788	MW0059	-	-	conserved hypothetical protein	
60	 26.47 -1    70927..71130    	 +	67	21281789	MW0060	-	-	hypothetical protein	
61	 31.65       71179..71475    	 +	98	21281790	MW0061	-	-	hypothetical protein	
62	 29.07 -1    71547..72767    	 -	406	21281791	MW0062	-	-	ORFID:MW0062~hypothetical protein, similar to macrolide-efflux determinant	
63	 31.16       72760..73311    	 -	183	21281792	MW0063	-	-	conserved hypothetical protein	
64	 27.64 -1    73424..74284    	 +	286	21281793	MW0064	-	-	ORFID:MW0064~hypothetical protein, similar to transcriptional regulator (LysR family)	
65	 26.22 -1    74639..75172    	 -	177	21281794	MW0065	-	-	hypothetical protein	
66	 26.26 -1    75272..76006    	 +	244	21281795	MW0066	-	-	ORFID:MW0066~hypothetical protein, similar to transcriptional regulator	
67	 30.07       76431..77042    	 +	203	21281796	MW0067	-	-	hypothetical protein	
68	 31.30       77309..80461    	 +	1050	21281797	MW0068	-	-	ORFID:MW0068~hypothetical protein, similar to DNA helicase	
69	 32.09       80518..81000    	 +	160	21281798	MW0069	-	-	hypothetical protein	
70	 33.23       81205..82191    	 +	328	21281799	plc	-	-	1-phosphatidylinositol phosphodiesterase precurosr	
71	 29.57       82412..83182    	 +	256	21281800	MW0071	-	-	hypothetical protein	
72	 28.02 -1    83234..84004    	 +	256	21281801	MW0072	-	-	hypothetical protein	
73	 27.56 -1    84355..85047    	 +	230	21281802	MW0073	-	-	hypothetical protein	
74	 33.77       85050..86426    	 +	458	21281803	MW0074	-	-	hypothetical protein	
75	 27.58 -1    86423..86752    	 +	109	21281804	MW0075	-	-	hypothetical protein	
76	 29.37 -1    86816..87067    	 +	83	21281805	MW0076	-	-	hypothetical protein	
77	 33.65       87319..89556    	 +	745	21281806	MW0077	-	-	ORFID:MW0077~hypothetical protein, similar to transcription regulator AraC/XylS family	
78	 36.90 +1    89707..90885    	 +	392	21281807	MW0078	-	-	ORFID:MW0078~hypothetical protein, similar to aminoacylase	
79	 37.08 +1    90887..92275    	 +	462	21281808	MW0079	-	-	ORFID:MW0079~hypothetical protein, similar to transmembrane efflux pump protein	
80	 35.79       92762..94429    	 -	555	21281809	MW0080	-	-	conserved hypothetical protein	
81	 35.75       94747..96522    	 -	591	21281810	MW0081	-	-	67 kDa Myosin-crossreactive streptococcal antigen homologue~ORFID:MW0081	
82	 29.75       96873..97346    	 +	157	21281811	MW0082	-	-	hypothetical protein	
83	 34.59       97608..99200    	 +	530	21281812	lctP	-	-	L-lactate permease homologue~ORFID:MW0083	
84	 38.07 +1    99529..101007   	 -	492	21281813	spa	-	-	IMMUNOGLOBULIN G BINDING PROTEIN A PRECURSOR	
85	 27.49 -1   101428..102180   	 -	250	21281814	sarH1	-	-	ORFID:MW0085~staphylococcal accessory regulator A homologue	
86	 37.47 +1   102549..103466   	 -	305	21281815	sirC	-	-	lipoprotein	
87	 38.45 +1   103544..104539   	 -	331	21281816	sirB	-	-	lipoprotein	
88	 32.23      104555..105547   	 -	330	21281817	sirA	-	-	lipoprotein	
89	 36.80 +1   105778..106758   	 +	326	21281818	MW0089	-	-	ORFID:MW0089~hypothetical protein, similar to cysteine synthase	
90	 37.39 +1   106755..107765   	 +	336	21281819	MW0090	-	-	ORFID:MW0090~hypothetical protein, similar to ornithine cyclodeaminase (EC 4.3.1.12)	
91	 35.56      107786..109540   	 +	584	21281820	MW0091	-	-	conserved hypothetical protein	
92	 39.14 +1   109533..110789   	 +	418	21281821	MW0092	-	-	ORFID:MW0092~hypothetical protein, similar to multi-drug resistance efflux pump	
93	 36.67 +1   110779..112515   	 +	578	21281822	MW0093	-	-	ORFID:MW0093~hypothetical protein, similar to rhizobactin siderophore biosynthesisprotein RhsC	
94	 36.03      112496..114274   	 +	592	21281823	MW0094	-	-	ORFID:MW0094~hypothetical protein, similar to rhizobactin siderophore biosynthesisprotein RhsF	
95	 40.13 +2   114246..115025   	 +	259	21281824	MW0095	-	-	ORFID:MW0095~hypothetical protein, similar to various aldolase	
96	 36.41 +1   115025..116227   	 +	400	21281825	MW0096	-	-	ORFID:MW0096~hypothetical protein, similar to diaminopimelate decarboxylase (EC 4.1.1.20)	
97	 37.25 +1   116231..116995   	 +	254	21281826	MW0097	-	-	hypothetical protein	
98	 29.41 -1   117191..117598   	 +	135	21281827	MW0098	-	-	hypothetical protein	
99	 31.42      117648..118274   	 +	208	21281828	MW0099	-	-	hypothetical protein	
100	 40.93 +2   118486..119262   	 +	258	21281829	butA	-	-	acetoinreductase	

 
 32.85 MEAN 
 
 3.41  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.