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IslandPath Analysis: Streptococcus pyogenes strain MGAS8232

Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).

No tRNA data available A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.55 STD DEV: 3.80

Streptococcus pyogenes strain MGAS8232, complete genome - 0..1895017
1845 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 33.26 -1      202..1557     	 +	451	19745202	dnaA	spyM18_0001	-	chromosomal replication initiator protein	
2	 33.33 -1     1709..2845     	 +	378	19745203	dnaN	spyM18_0002	-	beta subunit of DNA polymerase III	
3	 37.28        3447..4562     	 +	371	19745204	-	spyM18_0004	-	putative GTP-binding protein	
4	 31.93 -1     4632..5201     	 +	189	19745205	pth	spyM18_0005	-	putative peptidyl-tRNA hydrolase	
5	 35.62        5204..8707     	 +	1167	19745206	trcF	spyM18_0007	-	putative transcription-repair coupling factor	
6	 31.14 -1     8869..9141     	 +	90	19745207	-	spyM18_0008	-	conserved hypothetical protein	
7	 26.61 -2     9128..9499     	 +	123	19745208	divIC	spyM18_0009	-	putative cell division protein	
8	 31.62 -1     9634..10920    	 +	428	19745209	-	spyM18_0011	-	hypothetical protein	
9	 28.28 -2    10917..12203    	 +	428	19745210	mesJ	spyM18_0012	-	putative cell-cycle protein	
10	 30.20 -2    12208..12750    	 +	180	19745211	hpt	spyM18_0013	-	putative hypoxanthine-guanine phosphoribosyltransferase	
11	 37.83       12772..14751    	 +	659	19745212	ftsH	spyM18_0014	-	putative cell division protein	
12	 32.69 -1    15077..16468    	 +	463	19745213	-	spyM18_0015	-	putative amino acid permease	
13	 40.69       31158..32354    	 +	398	19745214	-	spyM18_0020	-	putative secreted protein	
14	 38.94       32607..33569    	 +	320	19745215	prsA	spyM18_0021	-	putative ribose-phosphate pyrophosphokinase	
15	 30.95 -1    33755..34510    	 +	251	19745216	-	spyM18_0022	-	conserved hypothetical protein	
16	 38.00       34608..35615    	 +	335	19745217	-	spyM18_0023	-	putative fatty acid/phospholipid synthesis protein	
17	 30.86 -2    35608..35850    	 +	80	19745218	acp	spyM18_0024	-	putative acyl carrier protein	
18	 35.65       35971..36705    	 +	244	19745219	purC	spyM18_0025	-	putative phosphoribosylaminoimidazole - succinocarboxamide synthase	
19	 44.99 +1    36781..40554    	 +	1257	19745220	purL	spyM18_0026	-	putative phosphoribosylformylglycinamidine synthase II	
20	 38.28       40715..42169    	 +	484	19745221	purF	spyM18_0027	-	putative phosphoribosylpyrophosphate amidotransferase	
21	 43.50 +1    42197..43219    	 +	340	19745222	purM	spyM18_0028	-	putative phosphoribosylformylglycinamide cyclo-ligase	
22	 47.21 +2    43387..43941    	 +	184	19745223	purN	spyM18_0029	-	Phosphoribosylglycinamide formyltransferase	
23	 47.22 +2    44125..45672    	 +	515	19745224	purH	spyM18_0030	-	putative phosphoribosyl carboxyamide aminoimidazole transformylase	
24	 39.47       45731..46855    	 -	374	19745225	-	spyM18_0031	-	putative choline binding protein	
25	 48.82 +2    47108..48373    	 +	421	19745226	purD	spyM18_0032	-	phosphoribosylamine-glycine ligase	
26	 48.20 +2    48532..49143    	 +	203	19745227	purE	spyM18_0033	-	putative phosphoribosylaminoimidazole carboxylase I	
27	 49.73 +2    49094..50203    	 +	369	19745228	purK	spyM18_0034	-	phosphoribosylaminoimidazole carboxylase II	
28	 28.71 -2    50224..51564    	 +	446	19745229	-	spyM18_0035	-	hypothetical protein	
29	 31.58 -1    51545..51658    	 +	37	19745230	-	spyM18_0036	-	hypothetical protein	
30	 44.78 +1    51933..53225    	 +	430	19745231	purB	spyM18_0037	-	adenylosuccinate lyase	
31	 29.39 -2    53359..54270    	 +	303	19745232	-	spyM18_0038	-	hypothetical protein	
32	 38.97       54431..55495    	 +	354	19745233	ruvB	spyM18_0039	-	putative Holliday junction DNA helicase, subunit B	
33	 35.39       55633..56070    	 +	145	19745234	-	spyM18_0040	-	putative protein-tyrosine phosphatase	
34	 35.07       56093..56494    	 +	133	19745235	-	spyM18_0041	-	hypothetical protein	
35	 36.77       56491..58266    	 +	591	19745236	-	spyM18_0042	-	putative acyltransferase	
36	 40.22       58575..61217    	 +	880	19745237	adhE	spyM18_0043	-	putative Adh2	
37	 42.28       61469..62485    	 +	338	19745238	adhP	spyM18_0045	-	putative alcohol dehydrogenase I	
38	 41.32       62873..64162    	 +	429	19745239	-	spyM18_0048	-	conserved hypothetical protein	
39	 40.13       64361..64669    	 +	102	19745240	rpsJ	spyM18_0049	-	30S ribosomal protein S10	
40	 41.95       64917..65543    	 +	208	19745241	rplC	spyM18_0050	-	50S ribosomal protein L3	
41	 42.63 +1    65567..66190    	 +	207	19745242	rplD	spyM18_0051	-	50S ribosomal protein L4	
42	 37.71       66190..66486    	 +	98	19745243	rplW	spyM18_0052	-	50S ribosomal protein L23	
43	 43.53 +1    66504..67337    	 +	277	19745244	rplB	spyM18_0053	-	50S ribosomal protein L2	
44	 39.78       67476..67754    	 +	92	19745245	rpsS	spyM18_0054	-	30S ribosomal protein S19	
45	 39.71       67770..68114    	 +	114	19745246	rplV	spyM18_0056	-	50S ribosomal protein L22	
46	 41.28       68127..68780    	 +	217	19745247	rpsC	spyM18_0057	-	30S ribosomal protein S3	
47	 43.24 +1    68784..69197    	 +	137	19745248	rplP	spyM18_0058	-	50S ribosomal protein L16	
48	 35.27       69207..69413    	 +	68	19745249	rpmC	spyM18_0060	-	50S ribosomal protein L29	
49	 38.31       69439..69699    	 +	86	19745250	rpsQ	spyM18_0061	-	30S ribosomal protein S17	
50	 44.17 +1    69724..70092    	 +	122	19745251	rplN	spyM18_0062	-	50S ribosomal protein L14	
51	 36.60       70171..70476    	 +	101	19745252	rplX	spyM18_0063	-	50S ribosomal protein L24	
52	 40.52       70500..71042    	 +	180	19745253	rplE	spyM18_0064	-	50S ribosomal protein L5	
53	 39.25       71058..71243    	 +	61	19745254	rpsN	spyM18_0065	-	30S ribosomal protein S14	
54	 36.84       71394..71792    	 +	132	19745255	rpsH	spyM18_0066	-	30S ribosomal protein S8	
55	 38.92       71995..72531    	 +	178	19745256	rplF	spyM18_0067	-	50S ribosomal protein L6	
56	 45.94 +1    72636..72992    	 +	118	19745257	rplR	spyM18_0068	-	50S ribosomal protein L18	
57	 42.42 +1    73011..73505    	 +	164	19745258	rpsE	spyM18_0069	-	30S ribosomal protein S5	
58	 36.61       73520..73702    	 +	60	19745259	rpmD	spyM18_0071	-	50S ribosomal protein L30	
59	 39.68       73917..74357    	 +	146	19745260	rplO	spyM18_0072	-	50S ribosomal protein L15	
60	 36.48       74374..75678    	 +	434	19745261	secY	spyM18_0073	-	putative preprotein translocase	
61	 39.44       75828..76466    	 +	212	19745262	adk	spyM18_0074	-	adenylate kinase	
62	 36.53       76584..76802    	 +	72	19745263	infA	spyM18_0075	-	putative translation initiation factor IF-1	
63	 37.61       76828..76944    	 +	38	19745264	rpmJ	spyM18_0076	-	50S ribosomal protein B	
64	 39.34       76962..77327    	 +	121	19745265	rpsM	spyM18_0077	-	30S ribosomal protein S13	
65	 44.01 +1    77345..77728    	 +	127	19745266	rpsK	spyM18_0078	-	30S ribosomal protein S11	
66	 38.13       77774..78712    	 +	312	19745267	rpoA	spyM18_0079	-	DNA-directed RNA polymerase alpha subunit	
67	 40.57       78727..79113    	 +	128	19745268	rplQ	spyM18_0080	-	50S ribosomal protein L17	
68	 49.24 +2    85244..85507    	 +	87	19745269	-	spyM18_0084	-	hypothetical protein	
69	 41.94       86359..86544    	 +	61	19745270	-	spyM18_0085	-	hypothetical protein	
70	 34.46 -1    87867..88310    	 +	147	19745271	adcR	spyM18_0092	-	putative repressor protein	
71	 41.11       88314..89033    	 +	239	19745272	adrC	spyM18_0093	-	ABC transporter (ATP-binding protein)	
72	 38.73       89026..89841    	 +	271	19745273	adrB	spyM18_0094	-	putative ABC transporter (permease)	
73	 41.15       89881..90264    	 -	127	19745274	-	spyM18_0095	-	putative histidine triad (HIT) protein	
74	 41.77       90320..91576    	 -	418	19745275	tyrS	spyM18_0096	-	putative tyrosine-tRNA ligase	
75	 40.55       91680..93980    	 +	766	19745276	pbp	spyM18_0098	-	putative penicillin-binding protein 1b	
76	 43.31 +1    94244..97810    	 +	1188	19745277	ropB	spyM18_0099	-	putative DNA-dependent RNA polymerase subunit beta	
77	 43.99 +1    97901..101542   	 +	1213	19745278	ropC	spyM18_0100	-	RNA polymerase beta' subunit	
78	 34.97      101694..102059   	 +	121	19745279	-	spyM18_0101	-	putative DNA binding protein	
79	 37.49      102151..103089   	 +	312	19745280	-	spyM18_0102	-	putative ABC transporter subunit ComYA	
80	 35.07      102968..104059   	 +	363	19745281	-	spyM18_0103	-	putative competence protein, ABC transporter subunit	
81	 33.94 -1   104061..104387   	 +	108	19745282	-	spyM18_0105	-	putative competence protein	
82	 34.27 -1   104362..104790   	 +	142	19745283	-	spyM18_0106	-	putative competence protein	
83	 37.97      104795..105031   	 +	78	19745284	-	spyM18_0107	-	hypothetical protein	
84	 35.86      105024..105458   	 +	144	19745285	-	spyM18_0108	-	putative competence protein	
85	 35.47      105442..105768   	 +	108	19745286	-	spyM18_0109	-	hypothetical protein	
86	 38.36      105866..106819   	 +	317	19745287	-	spyM18_0110	-	conserved hypothetical protein	
87	 38.76      106878..108074   	 +	398	19745288	-	spyM18_0111	-	acetate kinase	
88	 35.92      108261..108569   	 +	102	19745289	-	spyM18_0112	-	hypothetical protein	
89	 43.58 +1   108652..109422   	 -	256	19745290	-	spyM18_0113	-	putative pyrroline carboxylate reductase	
90	 45.04 +1   109470..110537   	 -	355	19745291	-	spyM18_0115	-	putative glutamyl-aminopeptidase	
91	 42.61 +1   111073..112074   	 +	333	19745292	tra	spyM18_0116	-	putative transposase	
92	 36.84      112088..112372   	 +	94	19745293	-	spyM18_0117	-	hypothetical protein	
93	 35.10      112369..112707   	 +	112	19745294	trxA	spyM18_0118	-	putative thioredoxin	
94	 42.58 +1   112704..113330   	 +	208	19745295	pheT1	spyM18_0119	-	hypothetical protein	
95	 38.89      113482..113877   	 +	131	19745296	ssb	spyM18_0120	-	putative single-strand binding protein	
96	 39.88      114132..114773   	 -	213	19745297	-	spyM18_0121	-	hypothetical protein	
97	 45.91 +1   114793..115770   	 -	325	19745298	-	spyM18_0122	-	hypothetical protein	
98	 42.27      115757..116629   	 -	290	19745299	-	spyM18_0123	-	putative HSP33	
99	 31.65 -1   117637..118290   	 -	217	19745300	nra.1	spyM18_0125	-	N-terminal fragment of Nra	
100	 35.94      118720..120294   	 +	524	19745301	cbp	spyM18_0126	-	putative collagen binding protein	

 
 38.55 MEAN 
 
 3.80  STD DEV

Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.