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IslandPath Analysis: Methanobacterium thermoautotrophicum deltaH

Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).

A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 49.85 STD DEV: 4.36

Methanobacterium thermoautotrophicum delta H complete genome - 0..1751377
1873 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 46.22         171..977      	 +	268	15678032	-	MTH1	S	conserved protein	
2	 51.78         997..2010     	 +	337	15678033	-	MTH2	J	ribosomal protein L3 (E.coli L3)	
3	 51.76        2023..2787     	 +	254	15678034	-	MTH3	J	ribosomal protein L4 (E.coli L4)	
4	 43.89 -1     2768..3070     	 +	100	15678035	-	MTH4	J	ribosomal protein L23a (E.coli L23)	
5	 50.96        3093..3818     	 +	241	15678036	-	MTH5	J	ribosomal protein L8 (E.coli L2)	
6	 47.45        3835..4245     	 +	136	15678037	-	MTH6	J	ribosomal protein S15 (E.coli S19)	
7	 51.95        4258..4719     	 +	153	15678038	-	MTH7	J	ribosomal protein L17 (E.coli L22)	
8	 49.42        4723..5499     	 +	258	15678039	-	MTH8	J	ribosomal protein S3 (E.coli S3)	
9	 48.21        5546..5740     	 +	64	15678040	-	MTH9	J	ribosomal protein L35 (E.coli L29)	
10	 45.10 -1     5753..6058     	 +	101	15678041	-	MTH10	J	ribosomal protein SUI1	
11	 45.74        6067..6348     	 +	93	15678042	-	MTH11	J	conserved protein	
12	 45.79        6359..6679     	 +	106	15678043	-	MTH12	J	ribosomal protein S11 (E.coli S17)	
13	 50.63        6681..7079     	 +	132	15678044	-	MTH13	J	ribosomal protein L23 (E.coli L14)	
14	 47.18        7090..7443     	 +	117	15678045	-	MTH14	J	ribosomal protein L26 (E.coli L24)	
15	 48.83        7446..8174     	 +	242	15678046	-	MTH15	J	ribosomal protein S4	
16	 47.93        8175..8681     	 +	168	15678047	-	MTH16	J	ribosomal protein L11 (E.coli L5)	
17	 45.10 -1     8684..8836     	 +	50	15678048	-	MTH17	J	ribosomal protein S29 (E.coli S14)	
18	 45.02 -1     8842..9243     	 +	133	15678049	-	MTH18	J	ribosomal protein S15a (E.coli S8)	
19	 49.81        9252..9785     	 +	177	15678050	-	MTH19	J	ribosomal protein L9 (E.coli L6)	
20	 48.32        9799..10125    	 +	108	15678051	-	MTH20	J	ribosomal protein L32	
21	 48.10       10235..10681    	 +	148	15678052	-	MTH21	J	ribosomal protein L19	
22	 48.36       10693..11271    	 +	192	15678053	-	MTH22	J	ribosomal protein L5	
23	 51.46       11268..11918    	 +	216	15678054	-	MTH23	J	ribosomal protein S2 (E.coli S5)	
24	 49.67       11931..12389    	 +	152	15678055	-	MTH24	J	ribosomal protein L7 (E.coli L30)	
25	 54.20       12402..12842    	 +	146	15678056	-	MTH25	J	ribosomal protein L27a (E.coli L15)	
26	 51.71       12859..14229    	 +	456	15678057	-	MTH26	N	preprotein translocase SecY	
27	 47.79       14222..14809    	 +	195	15678058	-	MTH27	F	adenylate kinase	
28	 47.97       14828..15394    	 +	188	15678059	-	MTH28	S	conserved protein	
29	 45.32 -1    15413..15679    	 +	88	15678060	-	MTH29	J	ribosomal protein L34 (E.coli L36)	
30	 52.06       15679..16164    	 +	161	15678061	-	MTH30	F	cytidylate kinase	
31	 41.23 -1    16195..16422    	 +	75	15678062	-	MTH31	J	ribosomal protein L14	
32	 55.79 +1    16437..17411    	 +	324	15678063	-	MTH32	J	centromere/microtubule-binding protein	
33	 44.89 -1    17648..18097    	 +	149	15678064	-	MTH34	J	ribosomal protein S18 (E.coli S13)	
34	 52.71       18114..18629    	 +	171	15678065	-	MTH35	J	ribosomal protein S9 (E.coli S4)	
35	 52.16       18647..19039    	 +	130	15678066	-	MTH36	J	ribosomal protein S14 (E.coli S11)	
36	 50.19       19041..19835    	 +	264	15678067	-	MTH37	K	DNA-dependent RNA polymerase, subunit D	
37	 46.72       19839..20204    	 +	121	15678068	-	MTH38	J	ribosomal protein L18 (E.coli L17)	
38	 51.24       20206..21054    	 +	282	15678069	-	MTH39	J	ribosomal protein S16 (E.coli S9)	
39	 45.83       21113..21280    	 +	55	15678070	-	MTH40	K	DNA-dependent RNA polymerase, subunit N	
40	 45.70       21452..21637    	 +	61	15678071	-	MTH42	K	DNA-dependent RNA polymerase, subunit K	
41	 52.60       21689..22939    	 +	416	15678072	-	MTH43	G	enolase	
42	 47.74       22967..23563    	 +	198	15678073	-	MTH44	J	ribosomal protein Sa (E.coli S2)	
43	 55.40 +1    23574..24407    	 +	277	15678074	-	MTH45	R	conserved protein	
44	 56.36 +1    24423..25334    	 +	303	15678075	-	MTH46	I	mevalonate kinase	
45	 50.69       25356..26156    	 +	266	15678076	-	MTH47	R	conserved protein	
46	 52.00       26230..27279    	 +	349	15678077	-	MTH48	C	conserved protein	
47	 52.62       27281..28633    	 +	450	15678078	-	MTH49	R	conserved protein	
48	 53.48       28630..29607    	 +	325	15678079	-	MTH50	H	bifunctional short chain isoprenyl diphosphate synthase	
49	 57.40 +1    29608..31269    	 +	553	15678080	-	MTH51	J	glutamyl-tRNA synthetase	
50	 53.12       31459..32691    	 +	410	15678081	-	MTH52	E	aspartate aminotransferase related protein	
51	 52.14       32752..33336    	 -	194	15678082	-	MTH53	-	unknown	
52	 51.96       33431..34069    	 -	212	15678083	-	MTH54	-	unknown	
53	 47.09       34108..35241    	 -	377	15678084	-	MTH55	-	unknown	
54	 51.00       35238..35735    	 -	165	15678085	-	MTH56	-	unknown	
55	 38.54 -2    35825..36208    	 -	127	15678086	-	MTH57	-	unknown	
56	 53.88       36384..36641    	 -	85	15678087	-	MTH58	-	unknown	
57	 53.09       36638..37219    	 -	193	15678088	-	MTH59	-	unknown	
58	 46.14       37308..37838    	 -	176	15678089	-	MTH60	-	unknown	
59	 50.82       38015..38500    	 -	161	15678090	-	MTH61	-	unknown	
60	 52.46       38584..39336    	 -	250	15678091	-	MTH62	R	molybdenum cofactor biosynthesis A (MoaA) related protein	
61	 42.90 -1    39469..39813    	 -	114	15678092	-	MTH63	S	conserved protein	
62	 35.13 -2    40384..40662    	 -	92	15678093	-	MTH64	-	unknown	
63	 38.54 -2    40646..41029    	 -	127	15678094	-	MTH65	-	unknown	
64	 41.44 -1    41052..41273    	 -	73	15678095	-	MTH66	-	unknown	
65	 37.70 -2    41393..41575    	 -	60	15678096	-	MTH67	R	unknown	
66	 37.99 -2    41517..42203    	 -	228	15679902	-	MTH68	R	TPR-repeat-containing protein	
67	 34.11 -2    42385..42642    	 -	85	15678097	-	MTH69	-	unknown	
68	 36.02 -2    42661..42846    	 -	61	15678098	-	MTH70	-	unknown	
69	 40.45 -2    42843..43109    	 -	88	15678099	-	MTH71	-	unknown	
70	 39.60 -2    43227..44438    	 -	403	15678100	-	MTH72	R	O-linked GlcNAc transferase	
71	 45.43 -1    44435..45385    	 -	316	15678101	-	MTH73	-	unknown	
72	 38.04 -2    45402..45677    	 -	91	15678102	-	MTH74	-	unknown	
73	 43.64 -1    45658..48171    	 -	837	15678103	-	MTH75	R	surface protease related protein	
74	 40.16 -2    48369..48749    	 -	126	15678104	-	MTH76	-	unknown	
75	 38.73 -2    48867..49274    	 -	135	15678105	-	MTH77	-	unknown	
76	 33.74 -2    49405..49647    	 -	80	15678106	-	MTH78	-	unknown	
77	 37.70 -2    49661..50164    	 -	167	15678107	-	MTH79	-	unknown	
78	 34.96 -2    50180..50425    	 -	81	15678108	-	MTH80	-	unknown	
79	 39.38 -2    50538..51182    	 -	214	15678109	-	MTH81	-	unknown	
80	 37.70 -2    51302..51484    	 -	60	15678110	-	MTH82	R	unknown	
81	 38.68 -2    51426..52565    	 -	379	15678111	-	MTH83	R	O-linked GlcNAc transferase	
82	 42.95 -1    52562..53164    	 -	200	15678112	-	MTH84	-	unknown	
83	 32.54 -2    53284..53409    	 +	41	15678113	-	MTH85	-	unknown	
84	 35.73 -2    53629..54045    	 -	138	15678114	-	MTH86	-	unknown	
85	 44.00 -1    54150..56672    	 -	840	15678115	-	MTH87	R	surface protease related protein	
86	 29.63 -2    56672..56779    	 -	35	15678116	-	MTH88	-	unknown	
87	 36.67 -2    56940..57119    	 -	59	15678117	-	MTH89	-	unknown	
88	 26.46 -2    57204..57596    	 -	130	15678118	-	MTH90	-	unknown	
89	 42.54 -1    57581..57808    	 -	75	15678119	-	MTH91	-	unknown	
90	 42.72 -1    57999..58211    	 -	70	15678120	-	MTH92	-	unknown	
91	 39.30 -2    58390..58758    	 -	122	15678121	-	MTH93	-	unknown	
92	 46.89       58795..59067    	 -	90	15678122	-	MTH94	-	unknown	
93	 42.76 -1    59128..59583    	 -	151	15678123	-	MTH95	-	unknown	
94	 43.33 -1    59620..60189    	 -	189	15678124	-	MTH96	R	conserved protein	
95	 50.18       60246..60524    	 -	92	15678125	-	MTH97	R	unknown	
96	 42.86 -1    60818..60943    	 -	41	15678126	-	MTH98	-	unknown	
97	 41.11 -2    61183..61362    	 -	59	15678127	-	MTH99	-	unknown	
98	 48.72       61443..61754    	 -	103	15678128	-	MTH100	-	unknown	
99	 49.87       61986..63485    	 +	499	15678129	-	MTH101	-	unknown	
100	 52.87       63467..63727    	 +	86	15678130	-	MTH102	-	unknown	

 
 49.85 MEAN 
 
 4.36  STD DEV

Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.