IslandPath Analysis: Mycoplasma genitalium G37



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).



No rRNA data available

A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 31.54   STD DEV: 3.65
Mycoplasma genitalium, complete genome - 0..580074
484 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 24.11 -2      735..1829     	 +	364	12044851	dnaN	MG001	L	DNA polymerase III, subunit beta (dnaN)	
2	 27.12 -1     1829..2761     	 +	310	12044852	-	MG002	O	dnaJ-like protein	
3	 35.23 +1     2846..4798     	 +	650	12044853	gyrB	MG003	L	DNA gyrase subunit B (gyrB)	
4	 32.97        4813..7323     	 +	836	12044854	gyrA	MG004	L	DNA gyrase subunit A (gyrA)	
5	 30.62        7295..8548     	 +	417	12044855	serS	MG005	J	seryl-tRNA synthetase (serS)	
6	 30.17        8552..9184     	 +	210	12044856	tmk	MG006	F	thymidylate kinase (tmk)	
7	 24.84 -1     9157..9921     	 +	254	12044857	-	MG007	L	conserved hypothetical protein	
8	 25.96 -1     9924..11252    	 +	442	12044858	tdhF	MG008	R	thiophene and furan oxidation protein (tdhF)	
9	 27.63 -1    11252..12040    	 +	262	12044859	-	MG009	L	conserved hypothetical protein	
10	 26.48 -1    12069..12725    	 +	218	12044860	-	MG010	L	conserved hypothetical protein	
11	 25.12 -1    12702..13565    	 -	287	12044861	-	MG011	H	conserved hypothetical protein	
12	 27.78 -1    13570..14433    	 -	287	12044862	-	MG012	H	conserved hypothetical protein	
13	 28.23       14396..15316    	 -	306	12044863	folD	MG013	H	methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase (folD)	
14	 28.95       15556..17427    	 +	623	12044864	-	MG014	Q	ABC transporter, ATP-binding protein	
15	 29.77       17474..19243    	 +	589	12044865	-	MG015	Q	ABC transporter, ATP-binding protein	
16	 27.61 -1    19253..19759    	 +	168	12044866	-	MG016	-	ATP-dependent RNA helicase, putative	
17	 24.86 -1    19825..20355    	 +	176	12044867	-	MG017	-	ATP-dependent RNA helicase, putative	
18	 28.40       20544..22346    	 +	600	12044868	-	MG018	K	ATP-dependent RNA helicase, putative	
19	 32.56       22388..23557    	 +	389	12044869	dnaJ	MG019	O	heat shock protein (dnaJ)	
20	 30.20       23541..24467    	 +	308	12044870	pip	MG020	R	proline iminopeptidase (pip)	
21	 28.40       24467..26005    	 +	512	12044871	metS	MG021	J	methionyl-tRNA synthetase (metS)	
22	 30.37       26035..26472    	 +	145	12044872	rpoE	MG022	K	DNA-directed RNA polymerase, subunit delta (rpoE)	
23	 31.83       26478..27344    	 +	288	12044873	fba	MG023	G	fructose-bisphosphate aldolase (fba)	
24	 29.62       27345..28448    	 +	367	12044874	-	MG024	R	GTP-binding protein, putative	
25	 29.10       28651..29547    	 +	298	12044875	-	MG025	M	conserved hypothetical protein	
26	 31.41       29551..30123    	 +	190	12044876	efp	MG026	J	elongation factor P (efp)	
27	 28.51       30092..30547    	 +	151	12044877	-	MG027	K	conserved hypothetical protein	
28	 28.55       30547..31152    	 +	201	12044878	-	MG028	-	conserved hypothetical protein	
29	 28.88       31142..31702    	 -	186	12044879	-	MG029	R	conserved hypothetical protein	
30	 33.49       31704..32324    	 -	206	12044880	upp	MG030	F	uracil phosphoribosyltransferase (upp)	
31	 30.58       32358..36713    	 -	1451	12044881	polC-1	MG031	L	DNA polymerase III, subunit alpha (polC-1)	
32	 31.58       36978..38978    	 +	666	12044882	-	MG032	-	conserved hypothetical protein	
33	 34.49       39128..39904    	 +	258	12044883	glpF	MG033	G	glycerol uptake facilitator (glpF)	
34	 32.71       39873..40514    	 -	213	12044884	tdk	MG034	F	thymidine kinase (tdk)	
35	 29.32       40543..41787    	 +	414	12044885	-	MG035	J	histidyl-tRNA synthetase	
36	 30.19       41777..43429    	 +	550	12044886	aspS	MG036	J	aspartyl-tRNA synthetase (aspS)	
37	 30.30       43402..44754    	 +	450	12044887	-	MG037	H	conserved hypothetical protein	
38	 33.73       44751..46277    	 -	508	12044888	glpK	MG038	C	glycerol kinase (glpK)	
39	 30.82       46268..47422    	 -	384	12044889	-	MG039	R	conserved hypothetical protein	
40	 32.55       47581..49356    	 +	591	12044890	-	MG040	N	lipoprotein, putative	
41	 33.33       49377..49643    	 +	88	12044891	ptsH	MG041	G	phosphocarrier protein HPr (ptsH)	
42	 29.23       49841..51520    	 +	559	12044892	potA	MG042	E	spermidine/putrescine ABC transporter, ATP-binding protein (potA)	
43	 31.24       51525..52382    	 +	285	12044893	potB	MG043	E	spermidine/putrescine ABC transporter, permease protein (potB)	
44	 29.12       52366..53220    	 +	284	12044894	potC	MG044	E	spermidine/putrescine ABC transporter, permease protein (potC)	
45	 31.13       53205..54656    	 +	483	12044895	-	MG045	E	lipoprotein, putative	
46	 32.28       54658..55605    	 +	315	12044896	-	MG046	O	O-sialoglycoprotein endopeptidase	
47	 32.29       55589..56740    	 +	383	12044897	metX	MG047	H	S-adenosylmethionine synthetase (metX)	
48	 33.18       56970..58310    	 -	446	12044898	ffh	MG048	N	signal recognition particle protein (ffh)	
49	 32.09       58117..59079    	 +	320	12044899	deoD	MG049	F	purine-nucleoside phosphorylase (deoD)	
50	 32.74       59083..59754    	 +	223	12044900	-	MG050	F	deoxyribose-phosphate aldolase	
51	 30.02       59741..61006    	 +	421	12044901	deoA	MG051	F	thymidine phosphorylase (deoA)	
52	 29.77       61015..61407    	 +	130	12044902	cdd	MG052	F	cytidine deaminase (cdd)	
53	 31.52       61407..63059    	 +	550	12044903	manB	MG053	G	phosphomannomutase (manB)	
54	 30.70       63036..63986    	 -	316	12044904	-	MG054	K	conserved hypothetical protein	
55	 28.49       63990..64361    	 -	123	12044905	-	MG055	N	conserved hypothetical protein	
56	 34.01       64368..64514    	 -	48	12044906	-	MG055.1	J	ribosomal protein L33, putative	
57	 25.52 -1    64528..64911    	 -	127	12044907	-	MG055.2	-	conserved hypothetical protein	
58	 27.82 -1    64898..65731    	 -	277	12044908	-	MG056	R	conserved hypothetical protein	
59	 27.37 -1    65713..66249    	 -	178	12044909	-	MG057	L	conserved hypothetical protein	
60	 32.89       66228..67121    	 -	297	12044910	prs	MG058	F	ribose-phosphate pyrophosphokinase (prs)	
61	 28.08       67207..67644    	 -	145	12044911	smpB	MG059	O	small protein (smpB)	
62	 27.29 -1    67651..68544    	 +	297	12044912	-	MG060	M	conserved hypothetical protein	
63	 33.04       68523..69908    	 -	461	12044913	-	MG061	G	conserved hypothetical protein	
64	 33.04       70531..72573    	 +	680	12044914	fruA	MG062	G	PTS system, fructose-specific IIABC component (fruA)	
65	 28.12       72668..73435    	 +	255	12044915	fruK	MG063	G	1-phosphofructokinase (fruK)	
66	 29.70       73691..77686    	 +	1331	12044916	-	MG064	-	conserved hypothetical protein	
67	 30.41       77686..79086    	 +	466	12044917	-	MG065	R	ABC transporter, ATP-binding protein	
68	 32.87       79090..81036    	 +	648	12044918	tktA	MG066	G	transketolase (tktA)	
69	 30.75       81047..82597    	 +	516	12044919	-	MG067	-	lipoprotein, putative	
70	 30.39       82621..84045    	 +	474	12044920	-	MG068	-	lipoprotein, putative	
71	 35.83 +1    88228..90954    	 +	908	12044921	ptsG	MG069	G	PTS system, glucose-specific IIABC component (ptsG)	
72	 34.15       91065..91919    	 +	284	12044922	rpS2	MG070	J	ribosomal protein S2 (rpS2)	
73	 33.71       91924..94548    	 +	874	12044923	-	MG071	P	cation-transporting P-type ATPase, putative	
74	 35.77 +1    94535..96955    	 +	806	12044924	secA	MG072	N	preprotein translocase (secA)	
75	 34.04       96933..98903    	 +	656	12044925	uvrB	MG073	L	excinuclease ABC subunit B (uvrB)	
76	 28.50       98906..99319    	 +	137	12044926	-	MG074	-	conserved hypothetical protein	
77	 30.86       99383..102457   	 +	1024	12044927	-	MG075	-	116 kDa surface antigen	
78	 29.26      102454..102870   	 -	138	12044928	-	MG076	-	conserved hypothetical protein	
79	 34.07      103104..104327   	 +	407	12044929	oppB	MG077	E	oligopeptide ABC transporter, permease protein (oppB)	
80	 35.46 +1   104320..105450   	 +	376	12044930	oppC	MG078	E	oligopeptide ABC transporter, permease protein (oppC)	
81	 34.33      105452..106660   	 +	402	12044931	oppD	MG079	E	oligopeptide ABC transporter, ATP-binding protein (oppD)	
82	 31.88      106660..109206   	 +	848	12044932	oppF	MG080	E	oligopeptide ABC transporter, ATP-binding protein (oppF)	
83	 35.02      109262..109675   	 +	137	12044933	rpl11	MG081	J	ribosomal protein L11 (rpl11)	
84	 33.63      109675..110355   	 +	226	12044934	rpL1	MG082	J	ribosomal protein L1 (rpL1)	
85	 33.51      110355..110924   	 +	189	12044935	pth	MG083	J	peptidyl-tRNA hydrolase (pth)	
86	 32.99      110917..111789   	 +	290	12044936	-	MG084	D	conserved hypothetical protein	
87	 32.91      111790..112725   	 +	311	12044937	ser	MG085	T	hpr(ser) kinase, putative	
88	 32.11      112718..113866   	 +	382	12044938	lgt	MG086	M	prolipoprotein diacylglyceryl transferase (lgt)	
89	 38.57 +1   113895..114314   	 +	139	12044939	rpS12	MG087	J	ribosomal protein S12 (rpS12)	
90	 37.61 +1   114331..114798   	 +	155	12044940	rpS7	MG088	J	ribosomal protein S7 (rpS7)	
91	 36.14 +1   114808..116874   	 +	688	12044941	fus	MG089	J	elongation factor G (fus)	
92	 34.45      116926..117552   	 +	208	12044942	rpS6	MG090	J	ribosomal protein S6 (rpS6)	
93	 34.78      117553..118035   	 +	160	12044943	ssb	MG091	L	single-stranded DNA-binding protein (ssb)	
94	 34.91      118025..118342   	 +	105	12044944	rpS18	MG092	J	ribosomal protein S18 (rpS18)	
95	 32.89      118345..118797   	 +	150	12044945	rpL9	MG093	J	ribosomal protein L9 (rpL9)	
96	 33.86      118847..120187   	 +	446	12044946	dnaB	MG094	L	replicative DNA helicase (dnaB)	
97	 31.75      120191..121387   	 +	398	12044947	-	MG095	-	lipoprotein, putative	
98	 32.82      121570..123522   	 +	650	12044948	-	MG096	-	conserved hypothetical protein	
99	 32.25      123579..124316   	 +	245	12044949	ung	MG097	L	uracil DNA glycosylase (ung)	
100	 31.38      124416..125849   	 +	477	12044950	-	MG098	J	Glu-tRNA amidotransferase subunit gatC-related protein	

 
 31.54 MEAN 
 
 3.65  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.