IslandPath Analysis: Streptococcus pyogenes MGAS10394



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).



No rRNA data available

A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 38.65   STD DEV: 3.80
Streptococcus pyogenes MGAS10394, complete genome - 0..1899877
1886 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 33.26      202..1557     	 +	451	50913347	-	M6_Spy0001	-	chromosomal replication initiator protein	
2	 33.42 -1     1712..2848     	 +	378	50913348	-	M6_Spy0002	-	DNA polymerase III beta chain	
3	 31.82 -1     2923..3120     	 +	65	50913349	-	M6_Spy0003	-	Hypothetical cytosolic protein	
4	 37.28        3450..4565     	 +	371	50913350	-	M6_Spy0004	-	GTP-binding protein	
5	 32.20 -1     4590..5204     	 +	204	50913351	-	M6_Spy0005	-	Peptidyl-tRNA hydrolase	
6	 35.36        5207..8710     	 +	1167	50913352	-	M6_Spy0006	-	Transcription-repair coupling factor	
7	 31.31 -1     8848..9144     	 +	98	50913353	-	M6_Spy0007	-	Heat shock protein 15	
8	 26.61 -2     9131..9502     	 +	123	50913354	-	M6_Spy0008	-	DivIC	
9	 26.19 -2     9499..9624     	 +	41	50913355	-	M6_Spy0009	-	Hypothetical protein	
10	 31.39 -1     9637..10923    	 +	428	50913356	-	M6_Spy0010	-	Beta-lactamase	
11	 28.59 -2    10920..12206    	 +	428	50913357	-	M6_Spy0011	-	tRNA(Ile)-lysidine synthetase	
12	 30.02 -2    12211..12753    	 +	180	50913358	-	M6_Spy0012	-	Hypoxanthine-guanine phosphoribosyltransferase	
13	 37.78       12775..14754    	 +	659	50913359	-	M6_Spy0013	-	Cell division protein ftsH	
14	 42.56 +1    14950..15957    	 -	335	50913360	-	M6_Spy0014	-	Transposase	
15	 32.58 -1    16098..17558    	 +	486	50913361	-	M6_Spy0015	-	Amino acid permease	
16	 36.30       17900..18034    	 -	44	50913362	-	M6_Spy0016	-	Hypothetical protein	
17	 40.69       32114..33310    	 +	398	50913363	-	M6_Spy0017	-	Secreted protein	
18	 38.97       33551..34525    	 +	324	50913364	-	M6_Spy0018	-	Ribose-phosphate pyrophosphokinase	
19	 30.95 -2    34711..35466    	 +	251	50913365	-	M6_Spy0019	-	RecO	
20	 37.19       35599..36687    	 -	362	50913366	-	M6_Spy0020	-	DNA integration/recombination/invertion protein	
21	 37.68       36863..37414    	 -	183	50913367	-	M6_Spy0021	-	unknown phage protein	
22	 35.68       37425..37808    	 -	127	50913368	-	M6_Spy0022	-	unknown phage protein	
23	 39.03       37822..38172    	 -	116	50913369	-	M6_Spy0023	-	Phage transcriptional regulator, Cro/CI family	
24	 32.81 -1    38811..39002    	 +	63	50913370	-	M6_Spy0024	-	unknown phage protein	
25	 39.30       39053..39253    	 +	66	50913371	-	M6_Spy0025	-	unknown phage protein	
26	 35.27       39341..39598    	 +	85	50913372	-	M6_Spy0026	-	unknown phage protein	
27	 36.02       39778..39963    	 +	61	50913373	-	M6_Spy0027	-	unknown phage protein	
28	 37.24       39994..40377    	 +	127	50913374	-	M6_Spy0028	-	unknown phage protein	
29	 37.91       40374..40526    	 +	50	50913375	-	M6_Spy0029	-	unknown phage protein	
30	 42.16       40523..40726    	 +	67	50913376	-	M6_Spy0030	-	unknown phage protein	
31	 40.67       40814..41113    	 +	99	50913377	-	M6_Spy0031	-	unknown phage protein	
32	 42.06       41113..42270    	 +	385	50913378	-	M6_Spy0032	-	unknown phage protein	
33	 41.37       42263..42847    	 +	194	50913379	-	M6_Spy0033	-	unknown phage protein	
34	 45.19 +1    42890..44812    	 +	640	50913380	-	M6_Spy0034	-	phage-related DNA polymerase	
35	 43.40 +1    44817..47201    	 +	794	50913381	-	M6_Spy0035	-	virulence-associated protein E	
36	 40.82       47549..47842    	 +	97	50913382	-	M6_Spy0036	-	Phage-related protein	
37	 41.19       47839..49161    	 +	440	50913383	-	M6_Spy0037	-	Phage-related DNA helicase	
38	 37.43       49162..49332    	 +	56	50913384	-	M6_Spy0038	-	unknown phage protein	
39	 38.46       49325..49597    	 +	90	50913385	-	M6_Spy0039	-	unknown phage protein	
40	 36.69       49730..50146    	 +	138	50913386	-	M6_Spy0040	-	Phage transcriptional activator	
41	 41.41       50194..50688    	 +	164	50913387	-	M6_Spy0041	-	Phage Terminase Small Subunit	
42	 36.36       50669..51955    	 +	428	50913388	-	M6_Spy0042	-	Terminase large subunit	
43	 37.18       51971..53503    	 +	510	50913389	-	M6_Spy0043	-	Portal protein	
44	 35.81       53460..54911    	 +	483	50913390	-	M6_Spy0044	-	unknown phage protein	
45	 34.39 -1    54939..55127    	 +	62	50913391	-	M6_Spy0045	-	unknown phage protein	
46	 37.83       55132..55398    	 +	88	50913392	-	M6_Spy0046	-	unknown phage protein	
47	 41.75       55566..56135    	 +	189	50913393	-	M6_Spy0047	-	Phage scaffold protein	
48	 39.86       56148..57035    	 +	295	50913394	-	M6_Spy0048	-	unknown phage protein	
49	 37.82       57047..57403    	 +	118	50913395	-	M6_Spy0049	-	unknown phage protein	
50	 35.84       57414..57692    	 +	92	50913396	-	M6_Spy0050	-	unknown phage protein	
51	 41.59       57707..58033    	 +	108	50913397	-	M6_Spy0051	-	unknown phage protein	
52	 33.89 -1    58037..58396    	 +	119	50913398	-	M6_Spy0052	-	unknown phage protein	
53	 39.83       58408..59007    	 +	199	50913399	-	M6_Spy0053	-	unknown phage protein	
54	 36.84       59061..59516    	 +	151	50913400	-	M6_Spy0054	-	unknown phage protein	
55	 37.61       59591..59824    	 +	77	50913401	-	M6_Spy0055	-	unknown phage protein	
56	 43.30 +1    59839..64221    	 +	1460	50913402	-	M6_Spy0056	-	unknown phage protein	
57	 37.96       64233..65075    	 +	280	50913403	-	M6_Spy0057	-	unknown phage protein	
58	 41.01       65085..67064    	 +	659	50913404	-	M6_Spy0058	-	Phage endopeptidase	
59	 38.39       67061..68068    	 +	335	50913405	-	M6_Spy0059	-	Hyaluronoglucosaminidase	
60	 43.97 +1    68078..69985    	 +	635	50913406	-	M6_Spy0060	-	Phage infection protein	
61	 37.21       69997..70434    	 +	145	50913407	-	M6_Spy0061	-	unknown phage protein	
62	 42.72 +1    70431..71048    	 +	205	50913408	-	M6_Spy0062	-	unknown phage protein	
63	 37.73       71058..71330    	 +	90	50913409	-	M6_Spy0063	-	unknown phage protein	
64	 39.47       71327..71554    	 +	75	50913410	-	M6_Spy0064	-	Holin	
65	 43.97 +1    71670..72872    	 +	400	50913411	-	M6_Spy0065	-	Phage-associated cell wall hydrolase	
66	 33.65 -1    73086..73709    	 +	207	50913412	-	M6_Spy0066	-	unknown phage protein	
67	 35.87       73823..74809    	 -	328	50913413	-	M6_Spy0067	-	Sdn	
68	 41.53       75042..75224    	 +	60	50913414	-	M6_Spy0068	-	unknown phage protein	
69	 36.95       75364..76470    	 +	368	50913415	-	M6_Spy0069	-	Fatty acid/phospholipid synthesis protein plsX	
70	 30.45 -2    76463..76705    	 +	80	50913416	-	M6_Spy0070	-	Acyl carrier protein	
71	 35.78       76827..77561    	 +	244	50913417	-	M6_Spy0071	-	Phosphoribosylaminoimidazole-succinocarboxamide synthase	
72	 44.81 +1    77637..81410    	 +	1257	50913418	-	M6_Spy0072	-	Phosphoribosylformylglycinamidine synthase	
73	 38.76       81644..83098    	 +	484	50913419	-	M6_Spy0073	-	Amidophosphoribosyltransferase	
74	 42.62 +1    83126..84148    	 +	340	50913420	-	M6_Spy0074	-	Phosphoribosylformylglycinamidine cyclo-ligase	
75	 46.85 +2    84316..84870    	 +	184	50913421	-	M6_Spy0075	-	Phosphoribosylglycinamide formyltransferase	
76	 47.16 +2    85054..86601    	 +	515	50913422	-	M6_Spy0076	-	phosphoribosylaminoimidazolecarboxamide formyltransferase	
77	 39.73       86660..87784    	 -	374	50913423	-	M6_Spy0077	-	Autolysin	
78	 46.57 +2    87890..89302    	 +	470	50913424	-	M6_Spy0078	-	Phosphoribosylamine--glycine ligase	
79	 48.20 +2    89460..90071    	 +	203	50913425	-	M6_Spy0079	-	Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit	
80	 48.38 +2    90022..91131    	 +	369	50913426	-	M6_Spy0080	-	Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit	
81	 28.78 -2    91152..92492    	 +	446	50913427	-	M6_Spy0081	-	Hypothetical cytosolic protein	
82	 45.01 +1    92708..94000    	 +	430	50913428	-	M6_Spy0082	-	Adenylosuccinate lyase	
83	 29.39 -2    94131..95042    	 +	303	50913429	-	M6_Spy0083	-	Transcriptional regulator	
84	 39.50       95196..96266    	 +	356	50913430	-	M6_Spy0084	-	Holliday junction DNA helicase	
85	 35.39       96404..96841    	 +	145	50913431	-	M6_Spy0085	-	Protein tyrosine phosphatase	
86	 35.82       96864..97265    	 +	133	50913432	-	M6_Spy0086	-	Hypothetical membrane associated protein	
87	 36.60       97262..99037    	 +	591	50913433	-	M6_Spy0087	-	Acyltransferase family	
88	 40.18       99346..101988   	 +	880	50913434	-	M6_Spy0088	-	Alcohol dehydrogenase	
89	 27.78 -2   101958..102065   	 -	35	50913435	-	M6_Spy0089	-	Hypothetical protein	
90	 42.08      102240..103256   	 +	338	50913436	-	M6_Spy0090	-	Alcohol dehydrogenase	
91	 41.24      103644..104933   	 +	429	50913437	-	M6_Spy0091	-	Na+ driven multidrug efflux pump	
92	 40.13      105132..105440   	 +	102	50913438	-	M6_Spy0092	-	SSU ribosomal protein S10P	
93	 41.79      105688..106314   	 +	208	50913439	-	M6_Spy0093	-	LSU ribosomal protein L3P	
94	 42.63 +1   106338..106961   	 +	207	50913440	-	M6_Spy0094	-	LSU ribosomal protein L1E	
95	 38.05      106961..107257   	 +	98	50913441	-	M6_Spy0095	-	LSU ribosomal protein L23P	
96	 43.53 +1   107275..108108   	 +	277	50913442	-	M6_Spy0096	-	LSU ribosomal protein L2P	
97	 39.34      108193..108525   	 +	110	50913443	-	M6_Spy0097	-	SSU ribosomal protein S19P	
98	 39.71      108541..108885   	 +	114	50913444	-	M6_Spy0098	-	LSU ribosomal protein L22P	
99	 41.44      108898..109551   	 +	217	50913445	-	M6_Spy0099	-	SSU ribosomal protein S3P	
100	 43.24 +1   109555..109968   	 +	137	50913446	-	M6_Spy0100	-	LSU ribosomal protein L16P	

 
 38.65 MEAN 
 
 3.80  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.