IslandPath Analysis: Mycoplasma mobile 163K



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).



No rRNA data available

A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 25.29   STD DEV: 3.59
Mycoplasma mobile 163K, complete genome - 0..777079
633 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 21.02      215..1603     	 +	462	47458836	dnaA	MMOB0010	-	chromosomal replication initiator protein	
2	 22.61        1739..2848     	 +	369	47458837	dnaN	MMOB0020	-	DNA polymerase III beta chain	
3	 17.39 -2     2848..3054     	 +	68	47458838	-	MMOB0030	-	expressed protein	
4	 20.73 -1     3074..3454     	 -	126	47458839	-	MMOB0040	-	conserved hypothetical protein	
5	 26.59        3444..4838     	 -	464	47458840	gltX	MMOB0050	-	glutamyl-tRNA synthetase	
6	 24.72        4925..6607     	 -	560	47458841	-	MMOB0060	-	expressed putative lipoprotein	
7	 23.85        6749..7897     	 +	382	47458842	-	MMOB0070	-	hypothetical protein	
8	 32.18 +1     7959..9176     	 +	405	47458843	pstS	MMOB0080	-	phosphate binding protein	
9	 27.42        9182..11209    	 +	675	47458844	pstA	MMOB0090	-	phosphate ABC transporter permease protein	
10	 27.90       11202..12047    	 +	281	47458845	pstB	MMOB0100	-	phosphate ABC transporter ATP-binding protein	
11	 23.71       12049..12744    	 +	231	47458846	phoU	MMOB0110	-	truncated phosphate uptake regulatory protein	
12	 16.38 -2    12766..13473    	 -	235	47458847	-	MMOB0120	-	hypothetical protein	
13	 26.68       13442..14764    	 -	440	47458848	xylH	MMOB0130	-	xylose ABC transporter permease protein	
14	 25.99       14730..16295    	 -	521	47458849	xylG	MMOB0140	-	xylose ABC transporter ATB-binding protein	
15	 31.29 +1    16318..17934    	 -	538	47458850	xylF	MMOB0150	-	xylose solute binding protein	
16	 30.57 +1    18298..20826    	 +	842	47458851	nrdA	MMOB0160	-	ribonucleotide reductase	
17	 24.60       20828..21331    	 +	167	47458852	btuR	MMOB0170	-	cobalamin adenosyltransferase	
18	 19.09 -1    21463..21813    	 -	116	47458853	-	MMOB0180	-	expressed protein	
19	 28.36       22567..23049    	 +	160	47458854	-	MMOB0190	-	expressed protein	
20	 26.23       23201..23707    	 +	168	47458855	-	MMOB0200	-	expressed protein	
21	 22.89       24206..24655    	 -	149	47458856	-	MMOB0210	-	hypothetical protein	
22	 21.77       24776..27118    	 -	780	47458857	lrpE	MMOB0220	-	long repeat protein copy 5	
23	 20.19 -1    27222..27647    	 -	141	47458858	lrpAbor	MMOB0230	-	truncated long repeat protein	
24	 21.88       28562..30901    	 -	779	47458859	lrpD	MMOB0240	-	long repeat protein copy 4	
25	 21.92       31005..33335    	 -	776	47458860	lrpC	MMOB0250	-	long repeat protein copy 3	
26	 21.65 -1    33439..35766    	 -	775	47458861	lrpB	MMOB0260	-	long repeat protein copy 2	
27	 21.95       35870..38215    	 -	781	47458862	lrpA	MMOB0270	-	long repeat protein copy 1	
28	 19.77 -1    38479..38736    	 +	85	47458863	-	MMOB0280	-	expressed protein	
29	 24.69       38726..39361    	 +	211	47458864	-	MMOB0290	-	expressed protein	
30	 28.89 +1    42704..43153    	 -	149	47458865	-	MMOB0300	-	hypothetical protein	
31	 16.23 -2    43762..44445    	 -	227	47458866	-	MMOB0310	-	expressed protein	
32	 19.82 -1    44746..45648    	 -	300	47458867	-	MMOB0320	-	conserved expressed putative DNA-repair protein	
33	 21.96       45652..49362    	 -	1236	47458868	-	MMOB0330	-	conserved hypothetical protein	
34	 26.18       49646..50512    	 +	288	47458869	thyA	MMOB0340	-	thymidylate synthase	
35	 24.05       50512..50985    	 +	157	47458870	dhfR	MMOB0350	-	dihydrofolate reductase	
36	 31.23 +1    51115..52590    	 +	491	47458871	-	MMOB0360	-	unspecified sugar ABC transporter binding protein	
37	 27.20       52592..54124    	 +	510	47458872	mglA	MMOB0370	-	unspecified sugar ABC transport ATP-binding protein	
38	 25.19       54124..55719    	 +	531	47458873	-	MMOB0380	-	unspecified sugar ABC transport permease protein	
39	 31.92 +1    55719..56636    	 +	305	47458874	-	MMOB0390	-	unspecified sugar ABC transport permease protein	
40	 21.13 -1    56722..57393    	 +	223	47458875	-	MMOB0400	-	expressed protein	
41	 29.99 +1    57555..58511    	 +	318	47458876	ldh	MMOB0410	-	l-lactate dehydrogenase	
42	 31.06 +1    58514..59923    	 +	469	47458877	-	MMOB0420	-	unspecified transport or permease protein	
43	 27.85       60043..61446    	 +	467	47458878	-	MMOB0430	-	unspecified transport or permease protein	
44	 25.82       61535..62998    	 +	487	47458879	lysS	MMOB0440	-	lysyl-tRNA synthetase	
45	 27.31       63032..63844    	 +	270	47458880	-	MMOB0450	-	COF family HAD hydrolase protein	
46	 23.27       63849..64703    	 +	284	47458881	-	MMOB0460	-	COF family HAD hydrolase protein	
47	 23.17       64733..65578    	 +	281	47458882	-	MMOB0470	-	COF family HAD hydrolase protein	
48	 25.67       65713..67134    	 +	473	47458883	potA	MMOB0480	-	spermidine/putrescine ABC transporter ATP-binding protein	
49	 25.74       67103..67945    	 +	280	47458884	potB	MMOB0490	-	spermidine/putrescine ABC transporter permease protein	
50	 24.62       67938..68867    	 +	309	47458885	potC	MMOB0500	-	spermidine/putrescine ABC transporter permease protein	
51	 28.62       68869..70482    	 +	537	47458886	potD	MMOB0510	-	probable spermidine/putrescine/ABC transporter substrate binding protein	
52	 27.20       70641..72221    	 +	526	47458887	-	MMOB0520	-	probable spermidine/putrescine/ABC transporter substrate binding protein	
53	 23.68       72257..72484    	 +	75	47458888	-	MMOB0530	-	hypothetical protein	
54	 31.30 +1    72513..73250    	 +	245	47458889	pyrH	MMOB0540	-	uridylate kinase	
55	 25.54       73254..73805    	 +	183	47458890	rrf	MMOB0550	-	ribosome recycling factor	
56	 24.46       73807..74820    	 +	337	47458891	cdsA	MMOB0560	-	phosphatidate cytidylyltransferase	
57	 25.43       74868..79169    	 +	1433	47458892	dnaE	MMOB0570	-	DNA polymerase III alpha subunit	
58	 25.10       79180..80163    	 -	327	47458893	lplA	MMOB0580	-	lipoate-protein ligase	
59	 20.87 -1    80163..80483    	 -	106	47458894	-	MMOB0590	-	expressed protein	
60	 22.55       80583..81500    	 +	305	47458895	-	MMOB0600	-	expressed protein	
61	 27.36       81554..83260    	 -	568	47458896	ptsI	MMOB0610	-	phosphoenolpyruvate-protein phosphotransferase enzyme I	
62	 31.01 +1    83472..84977    	 +	501	47458897	treB	MMOB0620	-	pts system trehalose specific enzyme iibc	
63	 24.50       84992..86587    	 +	531	47458898	treC	MMOB0630	-	alpha, alpha phosphotrehalase	
64	 28.94 +1    86580..86852    	 +	90	47458899	-	MMOB0640	-	hypothetical protein	
65	 29.84 +1    86867..87352    	 +	161	47458900	bglP	MMOB0650	-	pts system enzyme iia component	
66	 23.31       87378..88235    	 +	285	47458901	lip2	MMOB0660	-	triacyl glycerol lipase	
67	 25.35       88264..89253    	 -	329	47458902	mgpA	MMOB0670	-	mgpa-like protein	
68	 26.29       89326..90375    	 -	349	47458903	nemA	MMOB0680	-	NADH:flavin oxidoreductases	
69	 29.50 +1    90487..91086    	 -	199	47458904	rpsD	MMOB0690	-	30s ribosomal protein s4	
70	 21.74       91348..93072    	 +	574	47458905	-	MMOB0700	-	expressed protein	
71	 24.50       93041..94240    	 +	399	47458906	thiI	MMOB0710	-	thiamine biosynthesis protein thiI	
72	 23.07       94224..94895    	 +	223	47458907	ung	MMOB0720	-	uracil-DNA glycosylase	
73	 24.27       94931..97093    	 +	720	47458908	dnaX	MMOB0730	-	DNA polymerase III subunit gamma and tau	
74	 28.47       97106..97393    	 +	95	47458909	-	MMOB0740	-	putative DNA repair-related protein	
75	 23.35       97393..97983    	 +	196	47458910	recR	MMOB0750	-	recombination protein	
76	 27.30       97983..98612    	 +	209	47458911	tmk	MMOB0760	-	thymidylate kinase	
77	 28.27       98672..99757    	 +	361	47458912	-	MMOB0770	-	expressed protein	
78	 23.78       99788..100216   	 -	142	47458913	nifU	MMOB0780	-	aminotransferase protein U homolog	
79	 25.47      100203..101372   	 -	389	47458914	nifS	MMOB0790	-	aminotransferase protein S homolog	
80	 22.18      101375..102100   	 -	241	47458915	-	MMOB0800	-	putative rRNA methylase	
81	 22.77      103012..103920   	 -	302	47458916	-	MMOB0810	-	conserved hypothetical protein	
82	 29.59 +1   104141..105982   	 -	613	47458917	topA	MMOB0820	-	DNA topoisomerase I	
83	 31.02 +1   106271..106789   	 +	172	47458918	-	MMOB0830	-	putative phospholipid binding protein	
84	 25.82      107016..107747   	 +	243	47458919	-	MMOB0840	-	expressed protein	
85	 25.76      107771..109222   	 +	483	47458920	tig	MMOB0850	-	trigger factor	
86	 27.76      109320..111884   	 +	854	47458921	secA	MMOB0860	-	preprotein translocase secA subunit	
87	 22.14      111853..112281   	 +	142	47458922	-	MMOB0870	-	hypothetical protein	
88	 23.54      112395..114488   	 +	697	47458923	-	MMOB0880	-	expressed protein	
89	 24.93      114516..114884   	 -	122	47458924	-	MMOB0890	-	HIT-family hydrolase protein	
90	 24.46      114898..116790   	 -	630	47458925	-	MMOB0900	-	lipoprotein P60 homolog	
91	 25.64      116799..119450   	 -	883	47458926	-	MMOB0910	-	M. homonis p80-related protein	
92	 27.41      119577..120842   	 -	421	47458927	serS	MMOB0920	-	seryl-tRNA synthetase	
93	 20.77 -1   120929..123133   	 +	734	47458928	recD	MMOB0930	-	exodeoxyribonuclease V alpha chain	
94	 24.34      123815..124303   	 +	162	47458929	-	MMOB0940	-	conserved hypothetical protein	
95	 23.55      124594..125523   	 +	309	47458930	-	MMOB0950	-	putative type II DNA methylase protein	
96	 20.33 -1   125745..126359   	 +	204	47458931	recD	MMOB0960	-	exodeoxyribonuclease V C-terminal fragment	
97	 20.31 -1   126415..126867   	 -	150	47458932	-	MMOB0970	-	hypothetical protein	
98	 26.23      128047..129525   	 +	492	47458933	mvspA	MMOB0980	-	variable surface protein mvspA	
99	 26.79      129616..131862   	 -	748	47458934	ushA	MMOB0990	-	5'-nucleotidase	
100	 30.60 +1   131977..133110   	 -	377	47458935	ald	MMOB1000	-	alanine dehydrogenase	

 
 25.29 MEAN 
 
 3.59  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.