IslandPathversion 1.0

IslandPath Analysis: Bacillus cereus ATCC14579



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
No rRNA data available A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 35.40 STD DEV: 3.53
Bacillus cereus ATCC 14579, complete genome - 0..5411809
5234 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 34.75      281..1621     	 +	446	30018279	-	BC0001	-	Chromosomal replication initiator protein dnaA	
2	 33.42        1800..2945     	 +	381	30018280	-	BC0002	-	DNA polymerase III, beta chain	
3	 33.80        3073..3285     	 +	70	30018281	-	BC0003	-	hypothetical protein	
4	 33.42        3298..4425     	 +	375	30018282	-	BC0004	-	DNA replication and repair protein recF	
5	 37.84        4458..6386     	 +	642	30018283	-	BC0005	-	DNA gyrase subunit B	
6	 36.77        6472..8946     	 +	824	30018284	-	BC0006	-	DNA gyrase subunit A	
7	 30.74 -1    14232..15233    	 -	333	30018285	-	BC0012	-	IG hypothetical 16768	
8	 38.66       15349..16812    	 +	487	30018286	-	BC0013	-	Inosine-5'-monophosphate dehydrogenase	
9	 35.76       16917..18233    	 +	438	30018287	-	BC0014	-	D-alanyl-D-alanine carboxypeptidase	
10	 43.18 +2    18388..19281    	 +	297	30018288	-	BC0015	-	pyridoxine biosynthesis protein	
11	 41.12 +1    19300..19890    	 +	196	30018289	-	BC0016	-	pyridoxine biosynthesis amidotransferase	
12	 37.41       20218..21492    	 +	424	30018290	-	BC0017	-	Seryl-tRNA synthetase	
13	 35.14       21747..22298    	 +	183	30018291	-	BC0019	-	hypothetical Cytosolic Protein	
14	 34.12       23005..23640    	 -	211	30018292	-	BC0021	-	Deoxyguanosine kinase	
15	 28.57 -1    23766..24290    	 -	174	30018293	-	BC0022	-	Pyrazinamidase	
16	 37.72       24415..24915    	 +	166	30018294	-	BC0023	-	Cytosine deaminase	
17	 38.60       25392..27080    	 +	562	30018295	-	BC0024	-	DNA polymerase III subunit gamma/tau	
18	 37.88       27103..27432    	 +	109	30018296	-	BC0025	-	hypothetical Transcriptional Regulatory Protein	
19	 39.87 +1    27447..28043    	 +	198	30018297	-	BC0026	-	Recombination protein recR	
20	 34.68       28058..28279    	 +	73	30018298	-	BC0027	-	hypothetical Cytosolic Protein	
21	 31.85 -1    28441..28710    	 +	89	30018299	-	BC0028	-	SigmaK-factor processing regulatory protein BofA	
22	 25.00 -2    34129..34308    	 +	59	30018300	-	BC0034	-	CsfB protein	
23	 35.65       34380..35801    	 +	473	30018301	-	BC0035	-	Arginine decarboxylase	
24	 37.96       35803..36429    	 +	208	30018302	-	BC0036	-	Thymidylate kinase	
25	 36.69       36465..37448    	 +	327	30018303	-	BC0037	-	DNA polymerase III, delta' subunit	
26	 35.99       37454..38281    	 +	275	30018304	-	BC0038	-	Tpl protein	
27	 33.05       38290..38646    	 +	118	30018305	-	BC0039	-	hypothetical protein	
28	 33.74       38729..39469    	 +	246	30018306	-	BC0040	-	Methyltransferase	
29	 34.59       39715..40590    	 +	291	30018307	-	BC0041	-	Corrin/porphyrin methyltransferase	
30	 34.74       40611..40895    	 -	94	30018308	-	BC0042	-	Transcription state regulatory protein abrB	
31	 35.70       41381..43363    	 +	660	30018309	-	BC0043	-	Methionyl-tRNA synthetase	
32	 38.04       43533..44297    	 +	254	30018310	-	BC0044	-	Sec-independent secretion protein tatD	
33	 40.00 +1    44500..45069    	 +	189	30018311	-	BC0045	-	Ribonuclease M5	
34	 34.36       45066..45944    	 +	292	30018312	-	BC0046	-	Dimethyladenosine transferase	
35	 37.04       46055..46918    	 +	287	30018313	-	BC0047	-	Sporulation-specific protease YabG	
36	 34.87       47145..47405    	 +	86	30018314	-	BC0048	-	VEG protein	
37	 40.56 +1    47497..47676    	 +	59	30018315	-	BC0049	-	SspF protein	
38	 37.70       47873..48742    	 +	289	30018316	-	BC0050	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	
39	 37.46       48797..49645    	 +	282	30018317	-	BC0051	-	Pur operon repressor	
40	 36.53       49766..50140    	 +	124	30018318	-	BC0052	-	Translation initiation inhibitor	
41	 40.82 +1    50293..50586    	 +	97	30018319	-	BC0053	M	Stage V sporulation protein G	
42	 38.48       50900..52279    	 +	459	30018320	-	BC0054	-	Glucosamine-1-phosphate acetyltransferase	
43	 37.00       52298..53251    	 +	317	30018321	-	BC0055	-	Ribose-phosphate pyrophosphokinase	
44	 37.28       53252..53884    	 +	210	30018322	-	BC0056	-	Peptidyl-tRNA hydrolase	
45	 33.33       53955..54179    	 +	74	30018323	-	BC0057	-	hypothetical protein	
46	 35.54       54285..57815    	 +	1176	30018324	-	BC0058	-	Transcription-repair coupling factor	
47	 37.24       57952..58488    	 +	178	30018325	-	BC0059	-	Stage V sporulation protein T	
48	 34.96       58719..60320    	 +	533	30018326	-	BC0060	-	Polysaccharides export protein	
49	 36.89       60333..61793    	 +	486	30018327	-	BC0061	-	MazG protein	
50	 31.16 -1    61808..62083    	 +	91	30018328	-	BC0062	J	Heat shock protein 15	
51	 33.98       62142..62450    	 +	102	30018329	-	BC0063	-	hypothetical protein	
52	 32.70       62465..63100    	 +	211	30018330	-	BC0064	-	Spore cortex biosynthesis protein	
53	 33.06       63097..63456    	 +	119	30018331	-	BC0065	-	Cell division protein DIVIC	
54	 42.18 +1    63544..64029    	 +	161	30018332	-	BC0066	-	S1-type RNA-binding domain	
55	 35.91       64631..67078    	 +	815	30018333	-	BC0069	-	Stage II sporulation protein E	
56	 35.01       67309..68739    	 +	476	30018334	-	BC0070	-	Cell cycle protein MesJ	
57	 33.89       68736..69278    	 +	180	30018335	-	BC0071	-	Hypoxanthine-guanine phosphoribosyltransferase	
58	 39.64 +1    69364..71265    	 +	633	30018336	-	BC0072	-	Cell division protein ftsH	
59	 36.63       71510..72298    	 +	262	30018337	-	BC0073	-	Bvg accessory factor	
60	 39.38 +1    72305..73180    	 +	291	30018338	-	BC0074	-	33 kDa chaperonin	
61	 39.72 +1    73294..74217    	 +	307	30018339	-	BC0075	-	Cysteine synthase	
62	 38.34       74440..75837    	 +	465	30018340	-	BC0076	-	Para-aminobenzoate synthase component I	
63	 38.78       75843..76430    	 +	195	30018341	-	BC0077	-	Anthranilate synthase component II	
64	 35.05       76424..77296    	 +	290	30018342	-	BC0078	-	4-amino-4-deoxychorismate lyase	
65	 39.49 +1    77271..78131    	 +	286	30018343	-	BC0079	-	Dihydropteroate synthase	
66	 37.19       78132..78494    	 +	120	30018344	-	BC0080	-	Dihydroneopterin aldolase	
67	 34.69       78491..79006    	 +	171	30018345	-	BC0081	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	
68	 38.73       78958..79161    	 +	67	30018346	-	BC0082	-	Transcriptional regulator, Xre family	
69	 39.74 +1    79185..80183    	 +	332	30018347	-	BC0083	-	Nif3 family protein	
70	 37.00       80343..81842    	 +	499	30018348	-	BC0084	-	Lysyl-tRNA synthetase	
71	 32.90       92915..93376    	 +	153	30018349	-	BC0099	-	Transcriptional regulator ctsR	
72	 36.59       93544..94095    	 +	183	30018350	-	BC0100	-	ClpC ATPase	
73	 35.68       94100..95164    	 +	354	30018351	-	BC0101	-	Arginine kinase	
74	 38.59       95187..97622    	 +	811	30018352	-	BC0102	-	Negative regulator of genetic competence clpC/mecB	
75	 38.85       97718..99094    	 +	458	30018353	-	BC0103	-	DNA repair protein RadA	
76	 36.96       99098..100171   	 +	357	30018354	-	BC0104	-	DNA-binding protein	
77	 35.68      100332..101441   	 +	369	30018355	-	BC0105	-	hypothetical Membrane Associated Protein	
78	 40.09 +1   101458..102138   	 +	226	30018356	-	BC0106	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	
79	 37.74      102255..102731   	 +	158	30018357	-	BC0107	I	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	
80	 36.69      102788..104278   	 +	496	30018358	-	BC0108	-	Glutamyl-tRNA synthetase	
81	 37.09      104723..105388   	 +	221	30018359	-	BC0109	-	Serine acetyltransferase	
82	 36.05      105369..106766   	 +	465	30018360	-	BC0110	-	Cysteinyl-tRNA synthetase	
83	 38.73      106769..107176   	 +	135	30018361	-	BC0111	-	hypothetical protein	
84	 37.37      107173..107916   	 +	247	30018362	-	BC0112	-	23S rRNA methyltransferase	
85	 37.04      107920..108432   	 +	170	30018363	-	BC0113	-	hypothetical Cytosolic Protein	
86	 34.70      108500..109159   	 +	219	30018364	-	BC0114	-	RNA polymerase sigma-H factor	
87	 38.33      109474..109653   	 +	59	30018365	-	BC0115	-	Protein translocase subunit SecE	
88	 36.89      109785..110318   	 +	177	30018366	-	BC0116	K	Transcription antitermination protein nusG	
89	 43.43 +2   110486..110911   	 +	141	30018367	-	BC0117	-	LSU ribosomal protein L11P	
90	 40.63 +1   111082..111780   	 +	232	30018368	-	BC0118	-	LSU ribosomal protein L1P	
91	 41.32 +1   112014..112514   	 +	166	30018369	-	BC0119	-	LSU ribosomal protein L10P	
92	 39.17 +1   112582..112941   	 +	119	30018370	-	BC0120	-	LSU ribosomal protein L12P (L7/L12)	
93	 38.17      113018..113617   	 +	199	30018371	-	BC0121	-	16S rRNA m(2)G 1207 methyltransferase	
94	 41.82 +1   113908..117441   	 +	1177	30018372	-	BC0122	-	DNA-directed RNA polymerase beta chain	
95	 40.53 +1   117479..121090   	 +	1203	30018373	-	BC0123	-	DNA-directed RNA polymerase beta' chain	
96	 37.88      121189..121452   	 +	87	30018374	-	BC0124	-	LSU ribosomal protein L7AE	
97	 40.43 +1   121567..121989   	 +	140	30018375	-	BC0125	-	SSU ribosomal protein S12P	
98	 42.68 +2   122019..122489   	 +	156	30018376	-	BC0126	-	SSU ribosomal protein S7P	
99	 42.57 +2   122698..124776   	 +	692	30018377	-	BC0128	-	Protein Translation Elongation Factor G (EF-G)	
100	 43.77 +2   124894..126081   	 +	395	30018378	-	BC0129	-	Protein Translation Elongation Factor Tu (EF-TU)	

 
 35.40 MEAN 
 
 3.53  STD DEV 



Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.