IslandPath Analysis: Bacillus cereus ATCC 10987



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).



No rRNA data available

A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.34   STD DEV: 4.00
Bacillus cereus ATCC 10987, complete genome - 0..5224283
5603 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 35.42      408..1748     	 +	446	42779082	dnaA	BCE0001	-	chromosomal replication initiator protein DnaA	
2	 32.72        1927..3066     	 +	379	42779083	dnaN	BCE0002	-	DNA polymerase III, beta subunit	
3	 34.22        3182..3406     	 +	74	42779084	-	BCE0003	-	conserved hypothetical protein	
4	 34.57        3418..4545     	 +	375	42779085	recF	BCE0004	-	DNA replication and repair protein RecF	
5	 37.03        4584..6506     	 +	640	42779086	gyrB	BCE0005	-	DNA gyrase, B subunit	
6	 36.97        6595..9066     	 +	823	42779087	gyrA	BCE0006	-	DNA gyrase, A subunit	
7	 32.32        9241..9339     	 +	32	42779088	-	BCE0007	-	hypothetical protein	
8	 33.53       14353..15354    	 -	333	42779089	-	BCE0008	-	conserved hypothetical protein	
9	 38.59       15470..16933    	 +	487	42779090	guaB	BCE0009	-	inosine-5'-monophosphate dehydrogenase	
10	 35.46       17038..18354    	 +	438	42779091	dacA	BCE0010	-	D-alanyl-D-alanine carboxypeptidase	
11	 43.47 +2    18516..19403    	 +	295	42779092	-	BCE0011	-	pyridoxine biosynthesis protein	
12	 40.27 +1    19422..20012    	 +	196	42779093	-	BCE0012	-	glutamine amidotransferase, SNO family	
13	 38.51       20340..21614    	 +	424	42779094	serS	BCE0013	-	seryl-tRNA synthetase	
14	 34.48       21897..22421    	 +	174	42779095	-	BCE0014	-	hypothetical protein	
15	 35.43       22457..23125    	 -	222	42779096	-	BCE0015	-	deoxynucleoside kinase family protein	
16	 34.91       23128..23763    	 -	211	42779097	-	BCE0016	-	deoxynucleoside kinase family protein	
17	 30.74 -1    23889..24428    	 -	179	42779098	-	BCE0017	-	isochorismatase family protein	
18	 32.62       24406..24546    	 +	46	42779099	-	BCE0018	-	hypothetical protein	
19	 38.12       24536..25036    	 +	166	42779100	-	BCE0019	-	cytidine/deoxycytidylate deaminase zinc-binding domain protein	
20	 39.02       25513..27201    	 +	562	42779101	dnaX	BCE0020	-	DNA polymerase III, gamma and tau subunits	
21	 37.58       27224..27553    	 +	109	42779102	-	BCE0021	-	conserved hypothetical protein TIGR00103	
22	 39.53 +1    27568..28164    	 +	198	42779103	recR	BCE0022	-	recombination protein RecR	
23	 34.23       28179..28400    	 +	73	42779104	-	BCE0023	-	conserved hypothetical protein	
24	 35.00       28316..28495    	 +	59	42779105	-	BCE0024	-	hypothetical protein	
25	 32.22       28593..28862    	 +	89	42779106	bofA	BCE0025	-	sigma-k factor processing regulatory protein BofA	
26	 25.56 -2    34288..34467    	 +	59	42779107	-	BCE0026	-	csfB protein, putative	
27	 35.16       34540..35961    	 +	473	42779108	cad	BCE0027	-	lysine decarboxylase	
28	 37.00       35963..36589    	 +	208	42779109	tmk	BCE0028	-	thymidylate kinase	
29	 36.89       36625..37608    	 +	327	42779110	holB	BCE0029	-	DNA polymerase III, delta prime subunit	
30	 36.32       37605..38441    	 +	278	42779111	-	BCE0030	-	conserved hypothetical protein	
31	 33.61       38441..38806    	 +	121	42779112	-	BCE0031	-	conserved hypothetical protein	
32	 34.41       38927..39667    	 +	246	42779113	-	BCE0032	-	conserved hypothetical protein	
33	 35.05       39654..39944    	 +	96	42779114	-	BCE0033	-	conserved hypothetical protein	
34	 35.39       39913..40788    	 +	291	42779115	-	BCE0034	-	conserved hypothetical protein TIGR00096	
35	 34.74       40809..41093    	 -	94	42779116	abrB	BCE0035	-	transition state transcriptional regulatory protein AbrB	
36	 36.16       41611..43593    	 +	660	42779117	metS	BCE0036	-	methionyl-tRNA synthetase	
37	 36.98       43759..44526    	 +	255	42779118	-	BCE0037	-	deoxyribonuclease, TatD family	
38	 37.63       44740..45297    	 +	185	42779119	-	BCE0038	-	primase-related protein	
39	 36.63       45294..46172    	 +	292	42779120	ksgA	BCE0039	-	dimethyladenosine transferase	
40	 37.38       46283..47146    	 +	287	42779121	-	BCE0040	-	yabG protein	
41	 36.40       47385..47645    	 +	86	42779122	-	BCE0041	-	veg protein	
42	 39.44 +1    47737..47916    	 +	59	42779123	sspF	BCE0042	-	small, acid-soluble spore protein	
43	 38.85       48113..48982    	 +	289	42779124	ispE	BCE0043	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	
44	 37.46       49037..49885    	 +	282	42779125	purR	BCE0044	-	pur operon repressor PurR	
45	 33.85       49999..50382    	 +	127	42779126	-	BCE0045	-	endoribonuclease L-PSP, putative	
46	 39.08       50481..50828    	 +	115	42779127	spoVG	BCE0046	-	stage V sporulation protein G	
47	 38.48       51151..52530    	 +	459	42779128	gcaD	BCE0047	-	UDP-N-acetylglucosamine pyrophosphorylase	
48	 37.32       52549..53502    	 +	317	42779129	prs	BCE0048	-	ribose-phosphate pyrophosphokinase	
49	 35.07       53503..54135    	 +	210	42779130	spoVC	BCE0049	-	peptidyl-tRNA hydrolase	
50	 32.89       54206..54430    	 +	74	42779131	-	BCE0050	-	conserved hypothetical protein	
51	 35.60       54537..58067    	 +	1176	42779132	mfd	BCE0051	-	transcription-repair coupling factor	
52	 36.69       58204..58740    	 +	178	42779133	spoVT	BCE0052	-	stage V sporulation protein T	
53	 34.83       58971..60572    	 +	533	42779134	-	BCE0053	-	stage V sporulation protein B, putative	
54	 37.50       60678..62045    	 +	455	42779135	-	BCE0054	-	tetrapyrrole methylase family protein/MazG family protein	
55	 32.97       62060..62335    	 +	91	42779136	-	BCE0055	-	S4 domain protein	
56	 33.66       62394..62702    	 +	102	42779137	-	BCE0056	-	yabP protein	
57	 32.72       62699..63352    	 +	217	42779138	-	BCE0057	-	membrane protein, putative	
58	 35.09       63310..63708    	 +	132	42779139	divIC	BCE0058	-	cell division protein DivIC	
59	 42.65 +1    63796..64278    	 +	160	42779140	-	BCE0059	-	S1 RNA binding domain protein	
60	 36.44       64950..67328    	 +	792	42779141	spoIIE	BCE0060	-	stage II sporulation protein E	
61	 36.55       67554..68984    	 +	476	42779142	-	BCE0061	-	conserved hypothetical protein	
62	 34.25       68981..69523    	 +	180	42779143	hpt	BCE0062	-	hypoxanthine phosphoribosyltransferase	
63	 40.43 +1    69609..71510    	 +	633	42779144	ftsH	BCE0063	-	cell division protein FtsH	
64	 37.52       71736..72524    	 +	262	42779145	-	BCE0064	-	transcriptional activator, putative, Baf family	
65	 39.50 +1    72531..73406    	 +	291	42779146	hslO	BCE0065	-	chaperonin, 33 kDa	
66	 39.18       73511..74434    	 +	307	42779147	cysK	BCE0066	-	cysteine synthase A	
67	 38.39       74609..76051    	 +	480	42779148	pabB	BCE0067	-	para-aminobenzoate synthase, component I	
68	 39.29       76057..76644    	 +	195	42779149	pabA	BCE0068	-	para-aminobenzoate synthase glutamine amidotransferase, component II	
69	 36.66       76638..77510    	 +	290	42779150	pabC	BCE0069	-	4-amino-4-deoxychorismate lyase PabC	
70	 39.50 +1    77503..78345    	 +	280	42779151	folP	BCE0070	-	dihydropteroate synthase	
71	 36.36       78346..78708    	 +	120	42779152	folB	BCE0071	-	dihydroneopterin aldolase	
72	 34.69       78705..79220    	 +	171	42779153	folK	BCE0072	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	
73	 41.18 +1    79172..79375    	 +	67	42779154	-	BCE0073	-	DNA-binding protein	
74	 40.44 +1    79399..80397    	 +	332	42779155	-	BCE0074	-	TIM-barrel protein, putative, NifR3 family	
75	 36.93       80557..82056    	 +	499	42779156	lysS	BCE0075	-	lysyl-tRNA synthetase	
76	 24.44 -2    82152..82286    	 +	44	42779157	-	BCE0076	-	hypothetical protein	
77	 29.37 -1    82283..82408    	 +	41	42779158	-	BCE0077	-	hypothetical protein	
78	 33.33       87416..87877    	 +	153	42779159	ctsR	BCE0078	-	transcriptional regulator CtsR	
79	 35.34       88051..88599    	 +	182	42779160	-	BCE0079	-	conserved hypothetical protein	
80	 34.65       88604..89668    	 +	354	42779161	-	BCE0080	-	phosphotransferase domain protein	
81	 38.42       89691..92126    	 +	811	42779162	-	BCE0081	-	negative regulator of genetic competence ClpC/MecB	
82	 39.36 +1    92223..93599    	 +	458	42779163	radA	BCE0082	-	DNA repair protein RadA	
83	 37.52       93603..94676    	 +	357	42779164	-	BCE0083	-	DNA-binding protein, putative	
84	 35.05       94837..95946    	 +	369	42779165	-	BCE0084	-	conserved hypothetical protein	
85	 38.91       95963..96643    	 +	226	42779166	ispD	BCE0085	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	
86	 36.69       96759..97235    	 +	158	42779167	ispF	BCE0086	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	
87	 36.83       97325..98782    	 +	485	42779168	gltX	BCE0087	-	glutamyl-tRNA synthetase	
88	 37.99       99213..99878    	 +	221	42779169	cysE	BCE0088	-	serine O-acetyltransferase	
89	 36.77       99859..101256   	 +	465	42779170	cysS	BCE0089	-	cysteinyl-tRNA synthetase	
90	 37.75      101259..101666   	 +	135	42779171	-	BCE0090	-	conserved hypothetical protein	
91	 37.77      101663..102406   	 +	247	42779172	-	BCE0091	-	RNA methyltransferase, TrmH family, group 3	
92	 38.79      102410..102922   	 +	170	42779173	-	BCE0092	-	conserved hypothetical protein	
93	 35.91      102990..103649   	 +	219	42779174	sigH	BCE0093	-	RNA polymerase sigma-30 factor	
94	 33.33      103777..103923   	 +	48	42779175	rpmG	BCE0094	-	ribosomal protein L33	
95	 37.78      103956..104135   	 +	59	42779176	-	BCE0095	-	preprotein translocase, SecE subunit	
96	 37.27      104267..104800   	 +	177	42779177	nusG	BCE0096	-	transcription antitermination protein NusG	
97	 43.19 +1   104968..105393   	 +	141	42779178	rplK	BCE0097	-	ribosomal protein L11	
98	 40.98 +1   105571..106263   	 +	230	42779179	rplA	BCE0098	-	ribosomal protein L1	
99	 41.12 +1   106496..106996   	 +	166	42779180	rplJ	BCE0099	-	ribosomal protein L10	
100	 39.17      107064..107423   	 +	119	42779181	rplL	BCE0100	-	ribosomal protein L7/L12	

 
 35.34 MEAN 
 
 4.00  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.