IslandPathversion 1.0

IslandPath Analysis: Bacillus anthracis str. Sterne



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
No rRNA data available A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 35.52 STD DEV: 3.39
Bacillus anthracis str. Sterne, complete genome - 0..5228663
5287 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 35.42      408..1748     	 +	446	49183040	-	BAS0001	-	chromosomal replication initiator protein DnaA	
2	 32.11 -1     1927..3066     	 +	379	49183041	-	BAS0002	-	DNA polymerase III, beta subunit	
3	 34.74        3194..3406     	 +	70	49183042	-	BAS0003	-	conserved hypothetical protein	
4	 34.57        3419..4546     	 +	375	49183043	-	BAS0004	-	DNA replication and repair protein RecF	
5	 36.92        4585..6507     	 +	640	49183044	-	BAS0005	-	DNA gyrase, B subunit	
6	 36.53        6596..9067     	 +	823	49183045	-	BAS0006	-	DNA gyrase, A subunit	
7	 33.86       14354..15298    	 -	314	49183046	-	BAS0009	-	conserved hypothetical	
8	 38.52       15469..16932    	 +	487	49183047	-	BAS0011	-	inosine-5'-monophosphate dehydrogenase	
9	 35.23       17037..18353    	 +	438	49183048	-	BAS0012	-	D-alanyl-D-alanine carboxypeptidase	
10	 42.79 +2    18515..19402    	 +	295	49183049	-	BAS0013	-	pyridoxine biosynthesis protein	
11	 40.27 +1    19421..20011    	 +	196	49183050	-	BAS0014	-	glutamine amidotransferase, SNO family	
12	 38.27       20339..21613    	 +	424	49183051	-	BAS0015	-	seryl-tRNA synthetase	
13	 34.78       21870..22421    	 +	183	49183052	-	BAS0016	-	hypothetical protein	
14	 35.87       22457..23125    	 -	222	49183053	-	BAS0017	-	deoxynucleoside kinase family protein	
15	 34.59       23128..23763    	 -	211	49183054	-	BAS0018	-	deoxynucleoside kinase family protein	
16	 30.56 -1    23889..24428    	 -	179	49183055	-	BAS0019	-	isochorismatase family protein	
17	 37.72       24536..25036    	 +	166	49183056	-	BAS0020	-	cytidine/deoxycytidylate deaminase zinc-binding domain protein	
18	 38.90       25513..27201    	 +	562	49183057	-	BAS0021	-	DNA polymerase III, gamma and tau subunits	
19	 36.97       27224..27553    	 +	109	49183058	-	BAS0022	-	conserved hypothetical protein TIGR00103	
20	 40.03 +1    27568..28164    	 +	198	49183059	-	BAS0023	-	recombination protein RecR	
21	 32.88       28179..28400    	 +	73	49183060	-	BAS0024	-	conserved hypothetical protein	
22	 32.22       28615..28884    	 +	89	49183061	-	BAS0025	-	sigma-k factor processing regulatory protein BofA	
23	 25.56 -2    34304..34483    	 +	59	49183062	-	BAS0027	-	csfB protein, putative	
24	 35.09       34555..35976    	 +	473	49183063	-	BAS0028	-	lysine decarboxylase	
25	 36.04       35978..36604    	 +	208	49183064	-	BAS0029	-	thymidylate kinase	
26	 36.99       36640..37623    	 +	327	49183065	-	BAS0030	-	DNA polymerase III, delta prime subunit	
27	 36.44       37620..38456    	 +	278	49183066	-	BAS0031	-	conserved hypothetical protein	
28	 33.06       38456..38821    	 +	121	49183067	-	BAS0032	-	conserved hypothetical protein	
29	 34.41       38942..39682    	 +	246	49183068	-	BAS0033	-	conserved hypothetical protein	
30	 34.02       39669..39959    	 +	96	49183069	-	BAS0034	-	conserved hypothetical protein	
31	 34.82       39928..40803    	 +	291	49183070	-	BAS0035	-	conserved hypothetical protein TIGR00096	
32	 33.68       40824..41108    	 -	94	49183071	-	BAS0036	-	transition state transcriptional regulatory protein AbrB	
33	 36.01       41599..43581    	 +	660	49183072	-	BAS0037	-	methionyl-tRNA synthetase	
34	 37.50       43747..44514    	 +	255	49183073	-	BAS0038	-	deoxyribonuclease, TatD family	
35	 37.63       44729..45286    	 +	185	49183074	-	BAS0039	-	primase-related protein	
36	 36.06       45283..46161    	 +	292	49183075	-	BAS0040	-	dimethyladenosine transferase	
37	 37.50       46272..47135    	 +	287	49183076	-	BAS0041	-	yabG protein	
38	 36.78       47374..47634    	 +	86	49183077	-	BAS0042	-	veg protein	
39	 39.44 +1    47726..47905    	 +	59	49183078	-	BAS0043	-	small, acid-soluble spore protein	
40	 38.23       48093..48971    	 +	292	49183079	-	BAS0044	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	
41	 36.98       49026..49874    	 +	282	49183080	-	BAS0045	-	pur operon repressor PurR	
42	 35.47       49997..50371    	 +	124	49183081	-	BAS0046	-	endoribonuclease L-PSP, putative	
43	 39.37 +1    50470..50817    	 +	115	49183082	-	BAS0047	-	stage V sporulation protein G	
44	 38.33       51140..52519    	 +	459	49183083	-	BAS0048	-	UDP-N-acetylglucosamine pyrophosphorylase	
45	 37.21       52538..53491    	 +	317	49183084	-	BAS0049	-	ribose-phosphate pyrophosphokinase	
46	 34.40       53564..54124    	 +	186	49183085	-	BAS0050	-	peptidyl-tRNA hydrolase	
47	 32.89       54195..54419    	 +	74	49183086	-	BAS0051	-	conserved hypothetical protein	
48	 35.74       54525..58055    	 +	1176	49183087	-	BAS0052	-	transcription-repair coupling factor	
49	 36.31       58191..58727    	 +	178	49183088	-	BAS0053	-	stage V sporulation protein T	
50	 34.83       58958..60559    	 +	533	49183089	-	BAS0054	-	stage V sporulation protein B, putative	
51	 37.30       60572..62032    	 +	486	49183090	-	BAS0055	-	tetrapyrrole methylase family protein/MazG family protein	
52	 32.61       62047..62322    	 +	91	49183091	-	BAS0056	-	S4 domain protein	
53	 34.25       62363..62689    	 +	108	49183092	-	BAS0057	-	yabP protein	
54	 32.42       62686..63339    	 +	217	49183093	-	BAS0058	-	membrane protein, putative	
55	 33.61       63336..63695    	 +	119	49183094	-	BAS0059	-	cell division protein DivIC	
56	 42.44 +2    63783..64265    	 +	160	49183095	-	BAS0060	-	S1 RNA binding domain protein	
57	 37.08       64889..67315    	 +	808	49183096	-	BAS0061	-	stage II sporulation protein E	
58	 36.48       67549..68979    	 +	476	49183097	-	BAS0062	-	conserved hypothetical protein	
59	 34.81       68976..69518    	 +	180	49183098	-	BAS0063	-	hypoxanthine phosphoribosyltransferase	
60	 40.12 +1    69604..71505    	 +	633	49183099	-	BAS0064	-	cell division protein FtsH	
61	 38.28       71730..72518    	 +	262	49183100	-	BAS0065	-	transcriptional activator, putative, Baf family	
62	 39.84 +1    72525..73400    	 +	291	49183101	-	BAS0066	-	chaperonin, 33 kDa	
63	 39.94 +1    73505..74428    	 +	307	49183102	-	BAS0067	-	cysteine synthase A	
64	 38.20       74649..76046    	 +	465	49183103	-	BAS0068	-	para-aminobenzoate synthase, component I	
65	 39.63 +1    76052..76639    	 +	195	49183104	-	BAS0069	-	para-aminobenzoate synthase glutamine amidotransferase, component II	
66	 35.05       76633..77505    	 +	290	49183105	-	BAS0070	-	4-amino-4-deoxychorismate lyase PabC	
67	 39.15 +1    77498..78340    	 +	280	49183106	-	BAS0071	-	dihydropteroate synthase	
68	 36.64       78341..78703    	 +	120	49183107	-	BAS0072	-	dihydroneopterin aldolase	
69	 34.11       78700..79215    	 +	171	49183108	-	BAS0073	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	
70	 39.22 +1    79167..79370    	 +	67	49183109	-	BAS0074	-	DNA-binding protein	
71	 39.38 +1    79418..80392    	 +	324	49183110	-	BAS0075	-	TIM-barrel protein, putative, NifR3 family	
72	 36.73       80552..82051    	 +	499	49183111	-	BAS0076	-	lysyl-tRNA synthetase	
73	 33.33       87416..87877    	 +	153	49183112	-	BAS0078	-	transcriptional regulator CtsR	
74	 35.34       88051..88599    	 +	182	49183113	-	BAS0079	-	conserved hypothetical protein	
75	 34.65       88604..89668    	 +	354	49183114	-	BAS0080	-	phosphotransferase domain protein	
76	 39.12 +1    89691..92126    	 +	811	49183115	-	BAS0081	-	negative regulator of genetic competence ClpC/MecB	
77	 39.51 +1    92223..93599    	 +	458	49183116	-	BAS0082	-	DNA repair protein RadA	
78	 37.34       93603..94676    	 +	357	49183117	-	BAS0083	-	DNA-binding protein, putative	
79	 35.05       94837..95946    	 +	369	49183118	-	BAS0084	-	conserved hypothetical protein	
80	 39.35 +1    95963..96643    	 +	226	49183119	-	BAS0085	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	
81	 37.95       96758..97234    	 +	158	49183120	-	BAS0086	-	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	
82	 37.11       97324..98781    	 +	485	49183121	-	BAS0087	-	glutamyl-tRNA synthetase	
83	 37.39       99214..99879    	 +	221	49183122	-	BAS0088	-	serine O-acetyltransferase	
84	 36.77       99860..101257   	 +	465	49183123	-	BAS0089	-	cysteinyl-tRNA synthetase	
85	 38.24      101260..101667   	 +	135	49183124	-	BAS0090	-	conserved hypothetical protein	
86	 37.50      101664..102407   	 +	247	49183125	-	BAS0091	-	RNA methyltransferase, TrmH family, group 3	
87	 37.62      102411..102923   	 +	170	49183126	-	BAS0092	-	conserved hypothetical protein	
88	 35.92      102991..103647   	 +	218	49183127	-	BAS0093	-	RNA polymerase sigma-30 factor	
89	 33.33      103779..103925   	 +	48	49183128	-	BAS0094	-	ribosomal protein L33	
90	 37.78      103958..104137   	 +	59	49183129	-	BAS0095	-	preprotein translocase, SecE subunit	
91	 37.27      104269..104802   	 +	177	49183130	-	BAS0096	-	transcription antitermination protein NusG	
92	 42.96 +2   104970..105395   	 +	141	49183131	-	BAS0097	-	ribosomal protein L11	
93	 40.84 +1   105573..106265   	 +	230	49183132	-	BAS0098	-	ribosomal protein L1	
94	 41.12 +1   106498..106998   	 +	166	49183133	-	BAS0099	-	ribosomal protein L10	
95	 39.17 +1   107066..107425   	 +	119	49183134	-	BAS0100	-	ribosomal protein L7/L12	
96	 38.50      107500..108099   	 +	199	49183135	-	BAS0101	-	ybxB protein	
97	 41.74 +1   108392..111925   	 +	1177	49183136	-	BAS0102	-	DNA-directed RNA polymerase, beta subunit	
98	 40.45 +1   111963..115574   	 +	1203	49183137	-	BAS0103	-	DNA-directed RNA polymerase, beta' subunit	
99	 36.88      115655..115936   	 +	93	49183138	-	BAS0104	-	ribosomal protein L7A family	
100	 40.43 +1   116051..116473   	 +	140	49183139	-	BAS0105	-	ribosomal protein S12	

 
 35.52 MEAN 
 
 3.39  STD DEV 



Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.